Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0685020 | XP_013456276.1 | 83.438 | 320 | 27 | 4 | 1 | 319 | 1 | 295 | 0.0 | 522 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0685020 | sp|Q9T072|BH025_ARATH | 45.000 | 180 | 85 | 6 | 151 | 319 | 128 | 304 | 1.20e-35 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0685020 | A0A072UKT5 | 83.438 | 320 | 27 | 4 | 1 | 319 | 1 | 295 | 0.0 | 522 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0685020 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000370 | Msa0685020 | 0.820931 | 5.283211e-53 | -8.615850e-47 |
| Msa0013270 | Msa0685020 | 0.830668 | 2.579470e-55 | -8.615850e-47 |
| Msa0017300 | Msa0685020 | -0.813357 | 2.666075e-51 | -8.615850e-47 |
| Msa0017710 | Msa0685020 | 0.807454 | 5.015779e-50 | -8.615850e-47 |
| Msa0025570 | Msa0685020 | 0.825315 | 5.012158e-54 | -8.615850e-47 |
| Msa0037180 | Msa0685020 | 0.804275 | 2.335385e-49 | -8.615850e-47 |
| Msa0040860 | Msa0685020 | -0.802075 | 6.663748e-49 | -8.615850e-47 |
| Msa0044310 | Msa0685020 | 0.804065 | 2.582822e-49 | -8.615850e-47 |
| Msa0044780 | Msa0685020 | -0.809903 | 1.503474e-50 | -8.615850e-47 |
| Msa0045810 | Msa0685020 | 0.835171 | 1.960207e-56 | -8.615850e-47 |
| Msa0046200 | Msa0685020 | 0.829018 | 6.508487e-55 | -8.615850e-47 |
| Msa0046970 | Msa0685020 | 0.800853 | 1.185993e-48 | -8.615850e-47 |
| Msa0060410 | Msa0685020 | 0.818628 | 1.775116e-52 | -8.615850e-47 |
| Msa0062010 | Msa0685020 | 0.805197 | 1.499720e-49 | -8.615850e-47 |
| Msa0062190 | Msa0685020 | 0.825944 | 3.555520e-54 | -8.615850e-47 |
| Msa0065670 | Msa0685020 | -0.807219 | 5.625175e-50 | -8.615850e-47 |
| Msa0073110 | Msa0685020 | 0.826792 | 2.233480e-54 | -8.615850e-47 |
| Msa0081120 | Msa0685020 | -0.804024 | 2.634656e-49 | -8.615850e-47 |
| Msa0085690 | Msa0685020 | -0.813572 | 2.392155e-51 | -8.615850e-47 |
| Msa0095890 | Msa0685020 | -0.810019 | 1.419139e-50 | -8.615850e-47 |
| Msa0106540 | Msa0685020 | 0.852657 | 3.997053e-61 | -8.615850e-47 |
| Msa0604190 | Msa0685020 | 0.889438 | 2.423062e-73 | -8.615850e-47 |
| Msa0608820 | Msa0685020 | 0.820116 | 8.130657e-53 | -8.615850e-47 |
| Msa0610700 | Msa0685020 | -0.831849 | 1.321665e-55 | -8.615850e-47 |
| Msa0615070 | Msa0685020 | 0.800990 | 1.112155e-48 | -8.615850e-47 |
| Msa0631820 | Msa0685020 | 0.802430 | 5.632573e-49 | -8.615850e-47 |
| Msa0645370 | Msa0685020 | 0.829539 | 4.865517e-55 | -8.615850e-47 |
| Msa0645390 | Msa0685020 | 0.895039 | 1.398925e-75 | -8.615850e-47 |
| Msa0646010 | Msa0685020 | 0.821264 | 4.429579e-53 | -8.615850e-47 |
| Msa0646430 | Msa0685020 | 0.824172 | 9.322706e-54 | -8.615850e-47 |
| Msa0647970 | Msa0685020 | 0.803026 | 4.242200e-49 | -8.615850e-47 |
| Msa0649250 | Msa0685020 | -0.816096 | 6.594443e-52 | -8.615850e-47 |
| Msa0670580 | Msa0685020 | 0.822630 | 2.138007e-53 | -8.615850e-47 |
| Msa0682160 | Msa0685020 | 0.802989 | 4.317520e-49 | -8.615850e-47 |
| Msa0685020 | Msa0686040 | 0.819228 | 1.296686e-52 | -8.615850e-47 |
| Msa0685020 | Msa0691610 | 0.818803 | 1.620197e-52 | -8.615850e-47 |
| Msa0685020 | Msa0702690 | -0.805399 | 1.360289e-49 | -8.615850e-47 |
| Msa0685020 | Msa0707330 | 0.815250 | 1.017703e-51 | -8.615850e-47 |
| Msa0685020 | Msa0713740 | 0.804327 | 2.277813e-49 | -8.615850e-47 |
| Msa0685020 | Msa0732970 | 0.818902 | 1.538384e-52 | -8.615850e-47 |
| Msa0685020 | Msa0745140 | 0.847403 | 1.182045e-59 | -8.615850e-47 |
| Msa0685020 | Msa0746650 | 0.817415 | 3.337919e-52 | -8.615850e-47 |
| Msa0685020 | Msa0754020 | -0.806188 | 9.285090e-50 | -8.615850e-47 |
| Msa0685020 | Msa0755880 | 0.814749 | 1.314958e-51 | -8.615850e-47 |
| Msa0685020 | Msa0758880 | -0.804349 | 2.254365e-49 | -8.615850e-47 |
| Msa0685020 | Msa0769910 | -0.809430 | 1.899522e-50 | -8.615850e-47 |
| Msa0685020 | Msa0772220 | 0.805402 | 1.358117e-49 | -8.615850e-47 |
| Msa0685020 | Msa0773960 | 0.835322 | 1.795591e-56 | -8.615850e-47 |
| Msa0685020 | Msa0775660 | 0.827447 | 1.556951e-54 | -8.615850e-47 |
| Msa0685020 | Msa0776640 | 0.849421 | 3.268029e-60 | -8.615850e-47 |
| Msa0685020 | Msa0790650 | -0.809960 | 1.461190e-50 | -8.615850e-47 |
| Msa0685020 | Msa0792410 | 0.800611 | 1.328700e-48 | -8.615850e-47 |
| Msa0685020 | Msa0797580 | 0.805983 | 1.025550e-49 | -8.615850e-47 |
| Msa0685020 | Msa0801920 | -0.803482 | 3.414088e-49 | -8.615850e-47 |
| Msa0685020 | Msa0802950 | -0.801037 | 1.087415e-48 | -8.615850e-47 |
| Msa0685020 | Msa0807100 | -0.808820 | 2.566982e-50 | -8.615850e-47 |
| Msa0685020 | Msa0825920 | 0.850945 | 1.222368e-60 | -8.615850e-47 |
| Msa0685020 | Msa0833030 | -0.803248 | 3.816817e-49 | -8.615850e-47 |
| Msa0685020 | Msa0833200 | -0.811327 | 7.400901e-51 | -8.615850e-47 |
| Msa0685020 | Msa0838120 | -0.801774 | 7.684106e-49 | -8.615850e-47 |
| Msa0685020 | Msa0840520 | 0.806102 | 9.684310e-50 | -8.615850e-47 |
| Msa0685020 | Msa0857270 | 0.814096 | 1.833113e-51 | -8.615850e-47 |
| Msa0685020 | Msa0865420 | 0.837128 | 6.241435e-57 | -8.615850e-47 |
| Msa0685020 | Msa0878080 | 0.804786 | 1.827207e-49 | -8.615850e-47 |
| Msa0685020 | Msa0880910 | 0.837591 | 4.749738e-57 | -8.615850e-47 |
| Msa0685020 | Msa0898970 | 0.800444 | 1.436846e-48 | -8.615850e-47 |
| Msa0685020 | Msa0908270 | -0.801751 | 7.767191e-49 | -8.615850e-47 |
| Msa0685020 | Msa0908280 | -0.813461 | 2.530586e-51 | -8.615850e-47 |
| Msa0685020 | Msa0908350 | -0.815602 | 8.498508e-52 | -8.615850e-47 |
| Msa0685020 | Msa0908500 | -0.809690 | 1.670594e-50 | -8.615850e-47 |
| Msa0685020 | Msa0909260 | 0.801970 | 7.004410e-49 | -8.615850e-47 |
| Msa0685020 | Msa0910170 | 0.828224 | 1.012720e-54 | -8.615850e-47 |
| Msa0685020 | Msa0920730 | 0.807149 | 5.819763e-50 | -8.615850e-47 |
| Msa0685020 | Msa0928450 | 0.808177 | 3.521105e-50 | -8.615850e-47 |
| Msa0685020 | Msa0930210 | 0.801991 | 6.935124e-49 | -8.615850e-47 |
| Msa0685020 | Msa0931680 | 0.846188 | 2.541263e-59 | -8.615850e-47 |
| Msa0685020 | Msa0935840 | -0.801954 | 7.054744e-49 | -8.615850e-47 |
| Msa0685020 | Msa0945030 | 0.850608 | 1.520779e-60 | -8.615850e-47 |
| Msa0685020 | Msa0964400 | -0.815036 | 1.135593e-51 | -8.615850e-47 |
| Msa0685020 | Msa0967780 | 0.842087 | 3.203008e-58 | -8.615850e-47 |
| Msa0685020 | Msa0970270 | 0.805287 | 1.435501e-49 | -8.615850e-47 |
| Msa0685020 | Msa0973010 | -0.814328 | 1.629445e-51 | -8.615850e-47 |
| Msa0685020 | Msa0982730 | 0.818204 | 2.214150e-52 | -8.615850e-47 |
| Msa0685020 | Msa0998660 | -0.816231 | 6.151299e-52 | -8.615850e-47 |
| Msa0685020 | Msa1013190 | 0.825535 | 4.444766e-54 | -8.615850e-47 |
| Msa0685020 | Msa1022420 | 0.803551 | 3.302168e-49 | -8.615850e-47 |
| Msa0685020 | Msa1029780 | 0.823436 | 1.386436e-53 | -8.615850e-47 |
| Msa0685020 | Msa1029820 | 0.841449 | 4.719347e-58 | -8.615850e-47 |
| Msa0685020 | Msa1029840 | 0.806417 | 8.312133e-50 | -8.615850e-47 |
| Msa0685020 | Msa1029850 | 0.800799 | 1.216467e-48 | -8.615850e-47 |
| Msa0685020 | Msa1041910 | 0.810362 | 1.196950e-50 | -8.615850e-47 |
| Msa0685020 | Msa1068730 | 0.819506 | 1.120947e-52 | -8.615850e-47 |
| Msa0685020 | Msa1068940 | 0.852078 | 5.845988e-61 | -8.615850e-47 |
| Msa0685020 | Msa1068950 | 0.801262 | 9.781021e-49 | -8.615850e-47 |
| Msa0685020 | Msa1076280 | 0.826908 | 2.095592e-54 | -8.615850e-47 |
| Msa0685020 | Msa1077590 | 0.804321 | 2.284833e-49 | -8.615850e-47 |
| Msa0685020 | Msa1087080 | -0.800772 | 1.231768e-48 | -8.615850e-47 |
| Msa0685020 | Msa1088740 | -0.815903 | 7.281294e-52 | -8.615850e-47 |
| Msa0685020 | Msa1106590 | 0.800505 | 1.396548e-48 | -8.615850e-47 |
| Msa0685020 | Msa1111910 | 0.809033 | 2.311338e-50 | -8.615850e-47 |
| Msa0685020 | Msa1115600 | 0.824479 | 7.892569e-54 | -8.615850e-47 |
| Msa0685020 | Msa1149910 | 0.855031 | 8.288579e-62 | -8.615850e-47 |
| Msa0685020 | Msa1156430 | -0.800242 | 1.580198e-48 | -8.615850e-47 |
| Msa0685020 | Msa1156710 | 0.847447 | 1.149808e-59 | -8.615850e-47 |
| Msa0685020 | Msa1156720 | 0.809319 | 2.006638e-50 | -8.615850e-47 |
| Msa0685020 | Msa1164450 | 0.806913 | 6.528047e-50 | -8.615850e-47 |
| Msa0685020 | Msa1165460 | 0.817215 | 3.700770e-52 | -8.615850e-47 |
| Msa0685020 | Msa1167960 | 0.806207 | 9.202899e-50 | -8.615850e-47 |
| Msa0685020 | Msa1179180 | 0.814274 | 1.674807e-51 | -8.615850e-47 |
| Msa0685020 | Msa1190350 | -0.809911 | 1.497502e-50 | -8.615850e-47 |
| Msa0685020 | Msa1191530 | -0.801133 | 1.039749e-48 | -8.615850e-47 |
| Msa0685020 | Msa1192360 | 0.851663 | 7.666791e-61 | -8.615850e-47 |
| Msa0685020 | Msa1200500 | 0.806781 | 6.962105e-50 | -8.615850e-47 |
| Msa0685020 | Msa1205270 | -0.813469 | 2.520319e-51 | -8.615850e-47 |
| Msa0685020 | Msa1206920 | 0.820034 | 8.489225e-53 | -8.615850e-47 |
| Msa0685020 | Msa1217890 | 0.802507 | 5.428882e-49 | -8.615850e-47 |
| Msa0685020 | Msa1233630 | 0.802449 | 5.581399e-49 | -8.615850e-47 |
| Msa0685020 | Msa1246830 | 0.800249 | 1.574672e-48 | -8.615850e-47 |
| Msa0685020 | Msa1250660 | 0.818778 | 1.641497e-52 | -8.615850e-47 |
| Msa0685020 | Msa1253520 | 0.802207 | 6.258350e-49 | -8.615850e-47 |
| Msa0685020 | Msa1255030 | -0.807132 | 5.868979e-50 | -8.615850e-47 |
| Msa0685020 | Msa1257200 | 0.817596 | 3.037768e-52 | -8.615850e-47 |
| Msa0685020 | Msa1263110 | 0.803163 | 3.974129e-49 | -8.615850e-47 |
| Msa0685020 | Msa1266120 | -0.816403 | 5.631751e-52 | -8.615850e-47 |
| Msa0685020 | Msa1284020 | 0.803227 | 3.855391e-49 | -8.615850e-47 |
| Msa0685020 | Msa1286860 | -0.805022 | 1.631222e-49 | -8.615850e-47 |
| Msa0685020 | Msa1288070 | 0.841421 | 4.800050e-58 | -8.615850e-47 |
| Msa0685020 | Msa1293840 | 0.801972 | 6.996897e-49 | -8.615850e-47 |
| Msa0685020 | Msa1295210 | -0.808513 | 2.985254e-50 | -8.615850e-47 |
| Msa0685020 | Msa1295480 | -0.829316 | 5.512422e-55 | -8.615850e-47 |
| Msa0685020 | Msa1297220 | -0.810715 | 1.004182e-50 | -8.615850e-47 |
| Msa0685020 | Msa1297460 | 0.827488 | 1.521897e-54 | -8.615850e-47 |
| Msa0685020 | Msa1313250 | 0.804619 | 1.980154e-49 | -8.615850e-47 |
| Msa0685020 | Msa1314030 | 0.825780 | 3.890322e-54 | -8.615850e-47 |
| Msa0685020 | Msa1322500 | 0.806210 | 9.189393e-50 | -8.615850e-47 |
| Msa0685020 | Msa1322980 | 0.820547 | 6.473567e-53 | -8.615850e-47 |
| Msa0685020 | Msa1323260 | -0.817607 | 3.020271e-52 | -8.615850e-47 |
| Msa0685020 | Msa1342360 | -0.816014 | 6.877935e-52 | -8.615850e-47 |
| Msa0685020 | Msa1347390 | 0.818531 | 1.867112e-52 | -8.615850e-47 |
| Msa0685020 | Msa1354370 | -0.807907 | 4.018773e-50 | -8.615850e-47 |
| Msa0685020 | Msa1361980 | 0.813214 | 2.866620e-51 | -8.615850e-47 |
| Msa0685020 | Msa1365820 | 0.835069 | 2.079941e-56 | -8.615850e-47 |
| Msa0685020 | Msa1368390 | 0.837605 | 4.709542e-57 | -8.615850e-47 |
| Msa0685020 | Msa1368420 | 0.800799 | 1.216420e-48 | -8.615850e-47 |
| Msa0685020 | Msa1380740 | 0.806527 | 7.877200e-50 | -8.615850e-47 |
| Msa0685020 | Msa1405830 | 0.852205 | 5.377552e-61 | -8.615850e-47 |
| Msa0685020 | Msa1407810 | 0.843824 | 1.104793e-58 | -8.615850e-47 |
| Msa0685020 | Msa1408860 | -0.809044 | 2.298915e-50 | -8.615850e-47 |
| Msa0685020 | Msa1412330 | -0.812524 | 4.060931e-51 | -8.615850e-47 |
| Msa0685020 | Msa1413130 | 0.820992 | 5.116636e-53 | -8.615850e-47 |
| Msa0685020 | Msa1414780 | -0.812947 | 3.281280e-51 | -8.615850e-47 |
| Msa0685020 | Msa1422860 | 0.813463 | 2.527724e-51 | -8.615850e-47 |
| Msa0685020 | Msa1433360 | 0.836131 | 1.119708e-56 | -8.615850e-47 |
| Msa0685020 | Msa1436620 | 0.802910 | 4.482850e-49 | -8.615850e-47 |
| Msa0685020 | Msa1437780 | 0.842882 | 1.971370e-58 | -8.615850e-47 |
| Msa0685020 | Msa1455360 | 0.811970 | 5.364134e-51 | -8.615850e-47 |
| Msa0685020 | Msa1457770 | 0.814894 | 1.220954e-51 | -8.615850e-47 |
| Msa0685020 | Msa1461770 | 0.820525 | 6.550407e-53 | -8.615850e-47 |
| Msa0685020 | Msa1462610 | 0.800759 | 1.239852e-48 | -8.615850e-47 |
| Msa0137010 | Msa0685020 | -0.801800 | 7.587482e-49 | -8.615850e-47 |
| Msa0139500 | Msa0685020 | 0.830335 | 3.112392e-55 | -8.615850e-47 |
| Msa0141410 | Msa0685020 | 0.802690 | 4.977732e-49 | -8.615850e-47 |
| Msa0143590 | Msa0685020 | 0.823654 | 1.233290e-53 | -8.615850e-47 |
| Msa0157030 | Msa0685020 | -0.800756 | 1.241101e-48 | -8.615850e-47 |
| Msa0177320 | Msa0685020 | 0.809213 | 2.114230e-50 | -8.615850e-47 |
| Msa0195560 | Msa0685020 | 0.803852 | 2.859948e-49 | -8.615850e-47 |
| Msa0198990 | Msa0685020 | 0.826120 | 3.228750e-54 | -8.615850e-47 |
| Msa0211460 | Msa0685020 | 0.822786 | 1.965914e-53 | -8.615850e-47 |
| Msa0225070 | Msa0685020 | -0.800276 | 1.555041e-48 | -8.615850e-47 |
| Msa0371510 | Msa0685020 | 0.833041 | 6.697821e-56 | -8.615850e-47 |
| Msa0379480 | Msa0685020 | 0.804143 | 2.488322e-49 | -8.615850e-47 |
| Msa0386880 | Msa0685020 | 0.851219 | 1.023112e-60 | -8.615850e-47 |
| Msa0402770 | Msa0685020 | 0.826224 | 3.051333e-54 | -8.615850e-47 |
| Msa0403740 | Msa0685020 | -0.817816 | 2.709814e-52 | -8.615850e-47 |
| Msa0412580 | Msa0685020 | -0.815146 | 1.073527e-51 | -8.615850e-47 |
| Msa0419730 | Msa0685020 | 0.831586 | 1.535138e-55 | -8.615850e-47 |
| Msa0419860 | Msa0685020 | 0.821462 | 3.985703e-53 | -8.615850e-47 |
| Msa0428300 | Msa0685020 | -0.805906 | 1.064734e-49 | -8.615850e-47 |
| Msa0448290 | Msa0685020 | 0.815873 | 7.396058e-52 | -8.615850e-47 |
| Msa0450030 | Msa0685020 | 0.834055 | 3.738373e-56 | -8.615850e-47 |
| Msa0456450 | Msa0685020 | -0.815517 | 8.875850e-52 | -8.615850e-47 |
| Msa0457070 | Msa0685020 | -0.816305 | 5.923441e-52 | -8.615850e-47 |
| Msa0467170 | Msa0685020 | 0.840885 | 6.640515e-58 | -8.615850e-47 |
| Msa0467330 | Msa0685020 | 0.852501 | 4.429780e-61 | -8.615850e-47 |
| Msa0477900 | Msa0685020 | 0.809165 | 2.165107e-50 | -8.615850e-47 |
| Msa0481670 | Msa0685020 | 0.813099 | 3.037743e-51 | -8.615850e-47 |
| Msa0240590 | Msa0685020 | -0.803209 | 3.887534e-49 | -8.615850e-47 |
| Msa0241750 | Msa0685020 | 0.860151 | 2.522289e-63 | -8.615850e-47 |
| Msa0256540 | Msa0685020 | 0.818200 | 2.218639e-52 | -8.615850e-47 |
| Msa0267450 | Msa0685020 | -0.814795 | 1.284273e-51 | -8.615850e-47 |
| Msa0267510 | Msa0685020 | -0.821988 | 3.011901e-53 | -8.615850e-47 |
| Msa0270730 | Msa0685020 | -0.802671 | 5.023763e-49 | -8.615850e-47 |
| Msa0276860 | Msa0685020 | 0.807923 | 3.987281e-50 | -8.615850e-47 |
| Msa0279810 | Msa0685020 | 0.849887 | 2.423459e-60 | -8.615850e-47 |
| Msa0290800 | Msa0685020 | 0.817759 | 2.791717e-52 | -8.615850e-47 |
| Msa0299130 | Msa0685020 | -0.803467 | 3.438165e-49 | -8.615850e-47 |
| Msa0307040 | Msa0685020 | 0.804005 | 2.658340e-49 | -8.615850e-47 |
| Msa0307630 | Msa0685020 | 0.802629 | 5.125003e-49 | -8.615850e-47 |
| Msa0316000 | Msa0685020 | 0.828378 | 9.297009e-55 | -8.615850e-47 |
| Msa0319220 | Msa0685020 | 0.845718 | 3.410019e-59 | -8.615850e-47 |
| Msa0326710 | Msa0685020 | 0.808700 | 2.722498e-50 | -8.615850e-47 |
| Msa0328870 | Msa0685020 | 0.825166 | 5.435902e-54 | -8.615850e-47 |
| Msa0334320 | Msa0685020 | 0.810393 | 1.178972e-50 | -8.615850e-47 |
| Msa0354600 | Msa0685020 | 0.802205 | 6.265770e-49 | -8.615850e-47 |
| Msa0354840 | Msa0685020 | 0.804236 | 2.380447e-49 | -8.615850e-47 |
| Msa0364030 | Msa0685020 | -0.817542 | 3.124264e-52 | -8.615850e-47 |
| Msa0483980 | Msa0685020 | -0.802982 | 4.331338e-49 | -8.615850e-47 |
| Msa0518530 | Msa0685020 | 0.826376 | 2.806587e-54 | -8.615850e-47 |
| Msa0519070 | Msa0685020 | -0.804622 | 1.977387e-49 | -8.615850e-47 |
| Msa0525880 | Msa0685020 | 0.829842 | 4.106045e-55 | -8.615850e-47 |
| Msa0549130 | Msa0685020 | 0.909730 | 4.123334e-82 | -8.615850e-47 |
| Msa0549170 | Msa0685020 | 0.816024 | 6.843138e-52 | -8.615850e-47 |
| Msa0549960 | Msa0685020 | 0.819333 | 1.227176e-52 | -8.615850e-47 |
| Msa0555280 | Msa0685020 | 0.802055 | 6.727394e-49 | -8.615850e-47 |
| Msa0567330 | Msa0685020 | 0.846557 | 2.015098e-59 | -8.615850e-47 |
| Msa0567570 | Msa0685020 | 0.838435 | 2.880774e-57 | -8.615850e-47 |
| Msa0574900 | Msa0685020 | 0.802633 | 5.114007e-49 | -8.615850e-47 |
| Msa0576180 | Msa0685020 | 0.823389 | 1.422319e-53 | -8.615850e-47 |
| Msa0576320 | Msa0685020 | 0.842979 | 1.856811e-58 | -8.615850e-47 |
| Msa0597700 | Msa0685020 | 0.804933 | 1.703080e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0685020 | MtrunA17_Chr4g0033391 | 83.438 | 320 | 27 | 4 | 1 | 319 | 1 | 295 | 0.0 | 522 |
| Msa0685020 | MtrunA17_Chr4g0033281 | 88.401 | 319 | 18 | 3 | 1 | 319 | 1 | 300 | 0.0 | 519 |
| Msa0685020 | MtrunA17_Chr4g0033291 | 83.489 | 321 | 33 | 4 | 1 | 319 | 1 | 303 | 0.0 | 508 |
| Msa0685020 | MtrunA17_Chr2g0307131 | 65.330 | 349 | 72 | 7 | 1 | 319 | 1 | 330 | 2.30e-140 | 400 |
| Msa0685020 | MtrunA17_Chr2g0307141 | 63.610 | 349 | 82 | 7 | 1 | 319 | 1 | 334 | 2.67e-129 | 373 |
| Msa0685020 | MtrunA17_Chr6g0468491 | 66.124 | 307 | 75 | 9 | 23 | 319 | 1 | 288 | 3.55e-128 | 368 |
| Msa0685020 | MtrunA17_Chr6g0468461 | 56.268 | 343 | 93 | 8 | 1 | 319 | 1 | 310 | 1.90e-110 | 324 |
| Msa0685020 | MtrunA17_Chr7g0225901 | 57.807 | 301 | 61 | 7 | 23 | 319 | 1 | 239 | 4.28e-105 | 307 |
| Msa0685020 | MtrunA17_Chr4g0054581 | 53.867 | 362 | 115 | 8 | 1 | 319 | 1 | 353 | 4.48e-103 | 307 |
| Msa0685020 | MtrunA17_Chr4g0054621 | 47.384 | 344 | 128 | 11 | 1 | 319 | 1 | 316 | 2.19e-80 | 248 |
| Msa0685020 | MtrunA17_Chr5g0400621 | 42.947 | 319 | 136 | 12 | 17 | 319 | 20 | 308 | 1.95e-55 | 183 |
| Msa0685020 | MtrunA17_Chr5g0400641 | 54.248 | 153 | 59 | 4 | 174 | 319 | 1 | 149 | 9.12e-42 | 142 |
| Msa0685020 | MtrunA17_Chr5g0400661 | 35.455 | 330 | 167 | 10 | 13 | 319 | 7 | 313 | 5.03e-41 | 145 |
| Msa0685020 | MtrunA17_Chr4g0054551 | 38.272 | 243 | 125 | 6 | 97 | 319 | 67 | 304 | 1.17e-39 | 142 |
| Msa0685020 | MtrunA17_Chr4g0054561 | 38.683 | 243 | 124 | 6 | 97 | 319 | 67 | 304 | 4.79e-39 | 140 |
| Msa0685020 | MtrunA17_Chr2g0280161 | 47.205 | 161 | 79 | 2 | 163 | 319 | 171 | 329 | 2.88e-37 | 136 |
| Msa0685020 | MtrunA17_Chr2g0333641 | 36.122 | 263 | 146 | 7 | 60 | 319 | 43 | 286 | 7.17e-37 | 134 |
| Msa0685020 | MtrunA17_Chr8g0336681 | 39.462 | 223 | 113 | 5 | 109 | 319 | 102 | 314 | 1.08e-36 | 134 |
| Msa0685020 | MtrunA17_Chr2g0333621 | 39.352 | 216 | 119 | 4 | 109 | 319 | 82 | 290 | 1.47e-36 | 133 |
| Msa0685020 | MtrunA17_Chr5g0400671 | 42.938 | 177 | 98 | 2 | 146 | 319 | 126 | 302 | 1.60e-36 | 133 |
| Msa0685020 | MtrunA17_Chr4g0049331 | 37.083 | 240 | 133 | 5 | 92 | 319 | 53 | 286 | 9.71e-36 | 131 |
| Msa0685020 | MtrunA17_Chr4g0054571 | 49.080 | 163 | 71 | 4 | 168 | 319 | 147 | 308 | 3.45e-35 | 130 |
| Msa0685020 | MtrunA17_Chr4g0002801 | 41.848 | 184 | 89 | 6 | 152 | 319 | 128 | 309 | 1.15e-34 | 129 |
| Msa0685020 | MtrunA17_Chr4g0002781 | 37.069 | 232 | 117 | 6 | 102 | 319 | 112 | 328 | 8.50e-34 | 127 |
| Msa0685020 | MtrunA17_Chr7g0249811 | 38.421 | 190 | 108 | 3 | 130 | 319 | 127 | 307 | 2.17e-30 | 117 |
| Msa0685020 | MtrunA17_Chr2g0333611 | 39.655 | 174 | 86 | 6 | 157 | 319 | 29 | 194 | 4.91e-29 | 110 |
| Msa0685020 | MtrunA17_Chr2g0333541 | 44.048 | 168 | 85 | 4 | 160 | 319 | 81 | 247 | 6.69e-29 | 112 |
| Msa0685020 | MtrunA17_Chr1g0185621 | 31.250 | 144 | 84 | 2 | 171 | 301 | 475 | 616 | 3.56e-17 | 82.0 |
| Msa0685020 | MtrunA17_Chr8g0346161 | 30.864 | 162 | 104 | 3 | 143 | 297 | 263 | 423 | 6.16e-17 | 81.3 |
| Msa0685020 | MtrunA17_Chr8g0366751 | 30.539 | 167 | 92 | 2 | 162 | 304 | 443 | 609 | 1.33e-16 | 80.5 |
| Msa0685020 | MtrunA17_Chr4g0002831 | 34.000 | 150 | 85 | 5 | 173 | 319 | 45 | 183 | 1.40e-15 | 74.3 |
| Msa0685020 | MtrunA17_Chr7g0233441 | 33.835 | 133 | 67 | 2 | 194 | 319 | 57 | 175 | 4.23e-15 | 72.8 |
| Msa0685020 | MtrunA17_Chr5g0411341 | 30.539 | 167 | 98 | 3 | 156 | 304 | 474 | 640 | 4.64e-15 | 75.9 |
| Msa0685020 | MtrunA17_Chr8g0346151 | 28.108 | 185 | 104 | 6 | 116 | 277 | 214 | 392 | 2.66e-14 | 73.2 |
| Msa0685020 | MtrunA17_Chr8g0365711 | 26.627 | 169 | 108 | 4 | 161 | 317 | 234 | 398 | 3.85e-14 | 72.8 |
| Msa0685020 | MtrunA17_Chr4g0002851 | 32.667 | 150 | 69 | 4 | 178 | 319 | 50 | 175 | 6.20e-14 | 69.3 |
| Msa0685020 | MtrunA17_Chr7g0275821 | 29.677 | 155 | 100 | 2 | 167 | 317 | 244 | 393 | 9.39e-14 | 71.6 |
| Msa0685020 | MtrunA17_Chr7g0260841 | 34.234 | 111 | 63 | 1 | 138 | 238 | 312 | 422 | 4.85e-13 | 69.7 |
| Msa0685020 | MtrunA17_Chr3g0131691 | 29.032 | 155 | 97 | 2 | 173 | 314 | 300 | 454 | 6.74e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0685020 | AT4G37850.2 | 45.000 | 180 | 85 | 6 | 151 | 319 | 128 | 304 | 1.22e-36 | 134 |
| Msa0685020 | AT4G37850.1 | 45.000 | 180 | 85 | 6 | 151 | 319 | 128 | 304 | 1.22e-36 | 134 |
| Msa0685020 | AT2G22760.2 | 40.964 | 166 | 92 | 2 | 160 | 319 | 108 | 273 | 1.72e-33 | 125 |
| Msa0685020 | AT2G22760.1 | 40.964 | 166 | 92 | 2 | 160 | 319 | 108 | 273 | 3.19e-33 | 124 |
| Msa0685020 | AT2G22750.4 | 34.132 | 334 | 170 | 13 | 8 | 319 | 4 | 309 | 2.91e-31 | 120 |
| Msa0685020 | AT2G22750.3 | 34.132 | 334 | 170 | 13 | 8 | 319 | 4 | 309 | 3.36e-31 | 120 |
| Msa0685020 | AT2G22750.1 | 40.376 | 213 | 104 | 5 | 129 | 319 | 70 | 281 | 4.61e-31 | 119 |
| Msa0685020 | AT2G22750.2 | 40.376 | 213 | 104 | 5 | 129 | 319 | 70 | 281 | 4.66e-31 | 119 |
| Msa0685020 | AT2G22750.5 | 40.376 | 213 | 104 | 5 | 129 | 319 | 94 | 305 | 5.79e-31 | 119 |
| Msa0685020 | AT2G22770.1 | 38.095 | 168 | 86 | 1 | 170 | 319 | 131 | 298 | 7.94e-28 | 110 |
| Msa0685020 | AT4G17880.1 | 32.093 | 215 | 110 | 5 | 114 | 304 | 350 | 552 | 3.68e-19 | 88.6 |
| Msa0685020 | AT5G46760.1 | 34.940 | 166 | 86 | 6 | 156 | 301 | 396 | 559 | 6.34e-19 | 87.8 |
| Msa0685020 | AT1G32640.1 | 32.692 | 156 | 91 | 4 | 163 | 304 | 434 | 589 | 1.57e-16 | 80.5 |
| Msa0685020 | AT1G01260.1 | 37.143 | 105 | 63 | 1 | 161 | 262 | 420 | 524 | 1.76e-14 | 74.3 |
| Msa0685020 | AT1G01260.2 | 37.143 | 105 | 63 | 1 | 161 | 262 | 420 | 524 | 1.76e-14 | 74.3 |
| Msa0685020 | AT1G01260.3 | 37.143 | 105 | 63 | 1 | 161 | 262 | 420 | 524 | 1.76e-14 | 74.3 |
| Msa0685020 | AT2G46510.1 | 45.946 | 74 | 30 | 1 | 163 | 226 | 377 | 450 | 4.59e-14 | 73.2 |
| Msa0685020 | AT4G16430.1 | 38.235 | 102 | 59 | 1 | 156 | 253 | 301 | 402 | 8.79e-14 | 72.0 |
| Msa0685020 | AT4G09820.1 | 27.976 | 168 | 97 | 2 | 122 | 289 | 321 | 464 | 1.62e-13 | 71.2 |
| Msa0685020 | AT4G00870.1 | 32.374 | 139 | 80 | 3 | 150 | 279 | 230 | 363 | 6.97e-13 | 69.3 |
| Msa0685020 | AT5G46830.1 | 40.625 | 96 | 43 | 2 | 167 | 248 | 335 | 430 | 2.59e-12 | 67.8 |
| Msa0685020 | AT5G41315.1 | 28.962 | 183 | 99 | 6 | 162 | 316 | 432 | 611 | 1.08e-11 | 65.9 |
| Msa0685020 | AT5G41315.3 | 28.962 | 183 | 99 | 6 | 162 | 316 | 437 | 616 | 1.13e-11 | 65.9 |
| Msa0685020 | AT5G41315.2 | 28.962 | 183 | 99 | 6 | 162 | 316 | 440 | 619 | 1.22e-11 | 65.9 |
| Msa0685020 | AT1G63650.3 | 27.811 | 169 | 96 | 6 | 171 | 316 | 405 | 570 | 6.95e-11 | 63.5 |
| Msa0685020 | AT1G63650.1 | 27.811 | 169 | 96 | 6 | 171 | 316 | 405 | 570 | 6.95e-11 | 63.5 |
| Msa0685020 | AT1G63650.2 | 27.811 | 169 | 96 | 6 | 171 | 316 | 405 | 570 | 6.95e-11 | 63.5 |
Find 48 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCAGCTGGTTAACTGATT+TGG | 0.268145 | 4_4:-48847370 | Msa0685020:intron |
| CAAGTGGAAGCAAGAGTATT+AGG | 0.274085 | 4_4:-48843225 | Msa0685020:CDS |
| TCTTGTTCCTAACCTTAAAA+AGG | 0.274757 | 4_4:-48846529 | Msa0685020:intron |
| ATTGATGATACTTTCATTGC+TGG | 0.287035 | 4_4:+48847393 | None:intergenic |
| TCAAGAGCACAAGGGGCTTT+TGG | 0.303932 | 4_4:-48843175 | Msa0685020:CDS |
| CATCAGCATCAAGGAAATTC+AGG | 0.324134 | 4_4:+48847003 | None:intergenic |
| GATGGTGATGGAGAAATATT+TGG | 0.350142 | 4_4:+48846825 | None:intergenic |
| ATCAGTGTCTCCAACCGAAT+TGG | 0.364748 | 4_4:-48846718 | Msa0685020:CDS |
| GATAGTGTTGAATGTGTTGT+TGG | 0.376948 | 4_4:-48843258 | Msa0685020:CDS |
| CTGCAAGAGCAATGAAGGTC+TGG | 0.389825 | 4_4:+48846553 | None:intergenic |
| ACTCTTGCTTCCACTTGAAA+TGG | 0.401306 | 4_4:+48843231 | None:intergenic |
| ATCGCTGCATAGGCATGGTT+TGG | 0.409003 | 4_4:+48843302 | None:intergenic |
| AGAAACCTCAAAAGGGTCAT+TGG | 0.411401 | 4_4:-48846676 | Msa0685020:CDS |
| AATAGCAGTGTCTTACCCTT+TGG | 0.414898 | 4_4:-48843108 | Msa0685020:CDS |
| TAGGAAAACAAATGTTGATT+CGG | 0.415655 | 4_4:-48843206 | Msa0685020:CDS |
| CACTCAACAGAAACCTCAAA+AGG | 0.444007 | 4_4:-48846684 | Msa0685020:CDS |
| CAAACAACAATGTTTAACTC+TGG | 0.449913 | 4_4:-48846931 | Msa0685020:CDS |
| AAAGAGGAGTTAGATGGTGA+TGG | 0.464747 | 4_4:+48846813 | None:intergenic |
| AAACAACAATGTTTAACTCT+GGG | 0.467228 | 4_4:-48846930 | Msa0685020:CDS |
| TTGATGATACTTTCATTGCT+GGG | 0.467665 | 4_4:+48847394 | None:intergenic |
| TGACTTGCTGAGATTATTTG+TGG | 0.472239 | 4_4:+48846899 | None:intergenic |
| GCTGAGATTATTTGTGGAAG+TGG | 0.485912 | 4_4:+48846905 | None:intergenic |
| AAGAGCTGCAAGAGCAATGA+AGG | 0.492283 | 4_4:+48846548 | None:intergenic |
| AACTGAAAAGAGGAGTTAGA+TGG | 0.496291 | 4_4:+48846807 | None:intergenic |
| AGCAAAAGGCCTCGTGCTCA+TGG | 0.502148 | 4_4:-48846621 | Msa0685020:CDS |
| AATTTCCTTGATGCTGATGT+AGG | 0.503309 | 4_4:-48846999 | Msa0685020:CDS |
| GGTAACTACCTGAGCAATGA+TGG | 0.506977 | 4_4:+48843065 | None:intergenic |
| TTCCTTGATGCTGATGTAGG+AGG | 0.513457 | 4_4:-48846996 | Msa0685020:CDS |
| TGACATTACCATCATTGCTC+AGG | 0.520672 | 4_4:-48843073 | None:intergenic |
| TGCAAGAGCAATGAAGGTCT+GGG | 0.523923 | 4_4:+48846554 | None:intergenic |
| AAGGCCTCGTGCTCATGGTA+AGG | 0.535577 | 4_4:-48846616 | Msa0685020:CDS |
| TCCTTGATGCTGATGTAGGA+GGG | 0.555978 | 4_4:-48846995 | Msa0685020:CDS |
| AAGTATCATCAATCAGCAGC+TGG | 0.573007 | 4_4:-48847383 | Msa0685020:CDS |
| GTCAAGTGTAGAATCTCCAA+AGG | 0.576619 | 4_4:+48843092 | None:intergenic |
| TCTTCATCGCTGCATAGGCA+TGG | 0.581383 | 4_4:+48843297 | None:intergenic |
| AAGAATCTTCATCGCTGCAT+AGG | 0.581886 | 4_4:+48843292 | None:intergenic |
| ACCCTCCTACATCAGCATCA+AGG | 0.584158 | 4_4:+48846994 | None:intergenic |
| TGGTATTTGAAACTGAAAAG+AGG | 0.585974 | 4_4:+48846797 | None:intergenic |
| ACTCAACAGAAACCTCAAAA+GGG | 0.587077 | 4_4:-48846683 | Msa0685020:CDS |
| TACAATGTCAAGAGCACAAG+GGG | 0.594830 | 4_4:-48843182 | Msa0685020:CDS |
| TGTTGGTTCACCATTTCAAG+TGG | 0.611743 | 4_4:-48843241 | Msa0685020:CDS |
| GATACAATGTCAAGAGCACA+AGG | 0.611765 | 4_4:-48843184 | Msa0685020:CDS |
| TCATGGTAAGGATCACATCA+TGG | 0.611981 | 4_4:-48846604 | Msa0685020:CDS |
| TCAAGTGTAGAATCTCCAAA+GGG | 0.613125 | 4_4:+48843093 | None:intergenic |
| CGAATACAATATATTTGCTG+AGG | 0.615306 | 4_4:-48847033 | Msa0685020:CDS |
| AACAACAATGTTTAACTCTG+GGG | 0.649069 | 4_4:-48846929 | Msa0685020:CDS |
| TGATCCTTACCATGAGCACG+AGG | 0.705697 | 4_4:+48846612 | None:intergenic |
| ATACAATGTCAAGAGCACAA+GGG | 0.744485 | 4_4:-48843183 | Msa0685020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CGATTATTAATTAATTATTT+TGG | - | chr4_4:48843157-48843176 | Msa0685020:CDS | 10.0% |
| !!! | AACTTTTTTTTTTTTTTTTC+AGG | - | chr4_4:48843422-48843441 | Msa0685020:intron | 10.0% |
| !!! | TAAACAAAAAACTATTTTTT+AGG | + | chr4_4:48844393-48844412 | None:intergenic | 10.0% |
| !!! | TTCCATTTTATTTTATATAA+GGG | + | chr4_4:48844723-48844742 | None:intergenic | 10.0% |
| !!! | TTTCCATTTTATTTTATATA+AGG | + | chr4_4:48844724-48844743 | None:intergenic | 10.0% |
| !! | TATTTGTTTATAAATGTAAT+CGG | + | chr4_4:48845065-48845084 | None:intergenic | 10.0% |
| !! | AAAAGTAGTAATTAATTTAA+GGG | + | chr4_4:48845292-48845311 | None:intergenic | 10.0% |
| !!! | AATATAAGTGAATATTTTTT+TGG | + | chr4_4:48845423-48845442 | None:intergenic | 10.0% |
| !! | ACTTATATTTCTTATAAAAA+GGG | - | chr4_4:48845434-48845453 | Msa0685020:intron | 10.0% |
| !!! | TTATTTTGATCATTTATTAA+CGG | + | chr4_4:48845694-48845713 | None:intergenic | 10.0% |
| !! | ACTATTTATATAACTTATTT+GGG | + | chr4_4:48845874-48845893 | None:intergenic | 10.0% |
| !! | AAAAATAATTAAGGAATTAA+TGG | - | chr4_4:48846167-48846186 | Msa0685020:intron | 10.0% |
| !! | AAAATAATTAAGGAATTAAT+GGG | - | chr4_4:48846168-48846187 | Msa0685020:intron | 10.0% |
| !! | AAAAATGATTGTTAATTTAT+TGG | - | chr4_4:48846208-48846227 | Msa0685020:intron | 10.0% |
| !! | AAAAATGATTGTTAATTTAT+TGG | - | chr4_4:48846208-48846227 | Msa0685020:intron | 10.0% |
| !!! | TTTTTTTAAAATTTCGTTTT+AGG | + | chr4_4:48846423-48846442 | None:intergenic | 10.0% |
| !!! | TCTATGTTTATTCTTATTTA+AGG | + | chr4_4:48843301-48843320 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTTTTTGACAAG+AGG | + | chr4_4:48844215-48844234 | None:intergenic | 15.0% |
| !!! | TATTTTGACCAATATATAAA+GGG | + | chr4_4:48844245-48844264 | None:intergenic | 15.0% |
| !!! | GTAATTTTTATAATAATGAC+CGG | + | chr4_4:48844287-48844306 | None:intergenic | 15.0% |
| !! | ACATTCTTATCTTTATATAA+AGG | - | chr4_4:48844518-48844537 | Msa0685020:intron | 15.0% |
| !! | CATTCTTATCTTTATATAAA+GGG | - | chr4_4:48844519-48844538 | Msa0685020:intron | 15.0% |
| !! | TACCCTTATATAAAATAAAA+TGG | - | chr4_4:48844718-48844737 | Msa0685020:intron | 15.0% |
| !!! | AATTGTAGAGTATTTTATTT+GGG | + | chr4_4:48844915-48844934 | None:intergenic | 15.0% |
| !!! | AAATTGTAGAGTATTTTATT+TGG | + | chr4_4:48844916-48844935 | None:intergenic | 15.0% |
| !! | ATTTGTTTATAAATGTAATC+GGG | + | chr4_4:48845064-48845083 | None:intergenic | 15.0% |
| !! | ATAACTATAATATATTTCCT+TGG | + | chr4_4:48845226-48845245 | None:intergenic | 15.0% |
| !! | CAAAAGTAGTAATTAATTTA+AGG | + | chr4_4:48845293-48845312 | None:intergenic | 15.0% |
| !! | CACTTATATTTCTTATAAAA+AGG | - | chr4_4:48845433-48845452 | Msa0685020:intron | 15.0% |
| !!! | TCAATAAAATCACATTTTTA+AGG | + | chr4_4:48845635-48845654 | None:intergenic | 15.0% |
| !!! | TTGATTTTGTTTATTTTCAA+CGG | - | chr4_4:48845651-48845670 | Msa0685020:intron | 15.0% |
| !! | AATAAATGATCAAAATAAGT+TGG | - | chr4_4:48845696-48845715 | Msa0685020:intron | 15.0% |
| !! | ATAAATGATCAAAATAAGTT+GGG | - | chr4_4:48845697-48845716 | Msa0685020:intron | 15.0% |
| !!! | TAAAAGAATATTTCTATTTC+TGG | + | chr4_4:48845762-48845781 | None:intergenic | 15.0% |
| !! | CTATTTATATAACTTATTTG+GGG | + | chr4_4:48845873-48845892 | None:intergenic | 15.0% |
| !! | CACTATTTATATAACTTATT+TGG | + | chr4_4:48845875-48845894 | None:intergenic | 15.0% |
| !! | ATGAAAAAGGTAAAAAAAAT+AGG | - | chr4_4:48846137-48846156 | Msa0685020:intron | 15.0% |
| !!! | GTTTATTCTTATTTAAGGTT+AGG | + | chr4_4:48843296-48843315 | None:intergenic | 20.0% |
| !!! | TAAAGTATTGTACCTTTTTA+AGG | + | chr4_4:48843971-48843990 | None:intergenic | 20.0% |
| !! | AATCTTAATATATAAGTTGC+TGG | + | chr4_4:48844191-48844210 | None:intergenic | 20.0% |
| !! | TAACATTTCCCTTTATATAT+TGG | - | chr4_4:48844234-48844253 | Msa0685020:intron | 20.0% |
| !!! | CTATTTTGACCAATATATAA+AGG | + | chr4_4:48844246-48844265 | None:intergenic | 20.0% |
| !!! | AAAACTATTTTTTAGGTACA+TGG | + | chr4_4:48844386-48844405 | None:intergenic | 20.0% |
| !! | ACATGTTAAGAATCTAAAAA+TGG | + | chr4_4:48844675-48844694 | None:intergenic | 20.0% |
| !! | AAATGGAAAATGTTAACTTA+AGG | - | chr4_4:48844735-48844754 | Msa0685020:intron | 20.0% |
| !! | AATGGAAAATGTTAACTTAA+GGG | - | chr4_4:48844736-48844755 | Msa0685020:intron | 20.0% |
| !! | TTTGTTTATAAATGTAATCG+GGG | + | chr4_4:48845063-48845082 | None:intergenic | 20.0% |
| !!! | TAAACAAATACCAACTTTTT+AGG | - | chr4_4:48845075-48845094 | Msa0685020:intron | 20.0% |
| !! | ATTCAATTAACCTAAAAAGT+TGG | + | chr4_4:48845088-48845107 | None:intergenic | 20.0% |
| !! | ATCTAAAAAATTACTTCACT+CGG | - | chr4_4:48845159-48845178 | Msa0685020:intron | 20.0% |
| !!! | AATTAATTTAAGGGTATTCA+CGG | + | chr4_4:48845283-48845302 | None:intergenic | 20.0% |
| !! | TTATTATGACAGAGAATATT+AGG | + | chr4_4:48845332-48845351 | None:intergenic | 20.0% |
| !! | ATTCTCTGTCATAATAAATA+AGG | - | chr4_4:48845335-48845354 | Msa0685020:intron | 20.0% |
| !! | TTCTCTGTCATAATAAATAA+GGG | - | chr4_4:48845336-48845355 | Msa0685020:intron | 20.0% |
| !!! | ATTTTTTTGGTCCTTTTTAT+AGG | + | chr4_4:48845410-48845429 | None:intergenic | 20.0% |
| !! | AACAATTAGAATTATCATGA+GGG | - | chr4_4:48845565-48845584 | Msa0685020:intron | 20.0% |
| !!! | CACTTTAGTTCAAAATAAAT+AGG | - | chr4_4:48845597-48845616 | Msa0685020:intron | 20.0% |
| !! | AGTTATATAAATAGTGTACA+TGG | - | chr4_4:48845879-48845898 | Msa0685020:intron | 20.0% |
| !! | AAAAGGTAAAAAAAATAGGA+AGG | - | chr4_4:48846141-48846160 | Msa0685020:intron | 20.0% |
| !! | ACATATTAATTCTCTTACTT+GGG | + | chr4_4:48846335-48846354 | None:intergenic | 20.0% |
| !! | AACATATTAATTCTCTTACT+TGG | + | chr4_4:48846336-48846355 | None:intergenic | 20.0% |
| !! | AGTAAGAGAATTAATATGTT+TGG | - | chr4_4:48846336-48846355 | Msa0685020:intron | 20.0% |
| !!! | ATTTTATGATCTCTAACAAT+TGG | + | chr4_4:48846651-48846670 | None:intergenic | 20.0% |
| !! | TTAGAGATAAAGATAAATCT+TGG | - | chr4_4:48846997-48847016 | Msa0685020:CDS | 20.0% |
| ! | TTTGGTAAGAAAATCACATA+TGG | - | chr4_4:48843133-48843152 | Msa0685020:CDS | 25.0% |
| ! | GTCTACAGATATATTTGAAA+AGG | + | chr4_4:48843341-48843360 | None:intergenic | 25.0% |
| ! | AAACAACAATGTTTAACTCT+GGG | - | chr4_4:48843555-48843574 | Msa0685020:intron | 25.0% |
| !! | GTGATTCATATTTTCCAATT+CGG | + | chr4_4:48843784-48843803 | None:intergenic | 25.0% |
| !!! | TATTGTACCTTTTTAAGGTT+AGG | + | chr4_4:48843966-48843985 | None:intergenic | 25.0% |
| !!! | TAGTTGATGATTTTAAGAGT+TGG | + | chr4_4:48844013-48844032 | None:intergenic | 25.0% |
| !! | TTTTTATAATAATGACCGGA+AGG | + | chr4_4:48844283-48844302 | None:intergenic | 25.0% |
| !!! | TTTTGTTTATAATAGTGACC+AGG | - | chr4_4:48844404-48844423 | Msa0685020:intron | 25.0% |
| ! | ACAAGTTAAGGATCTATAAA+AGG | + | chr4_4:48844868-48844887 | None:intergenic | 25.0% |
| !!! | GATATTTAGTTCAAGTTGAT+AGG | + | chr4_4:48845019-48845038 | None:intergenic | 25.0% |
| ! | TTGTTTATAAATGTAATCGG+GGG | + | chr4_4:48845062-48845081 | None:intergenic | 25.0% |
| ! | GCAAAAAAAATATTCCTCTT+CGG | + | chr4_4:48845460-48845479 | None:intergenic | 25.0% |
| !!! | GTTTTAATGAATACTTACTC+TGG | + | chr4_4:48845495-48845514 | None:intergenic | 25.0% |
| ! | TTAATACAGCAACAAATTGT+AGG | - | chr4_4:48845534-48845553 | Msa0685020:intron | 25.0% |
| ! | CTCATGATAATTCTAATTGT+TGG | + | chr4_4:48845566-48845585 | None:intergenic | 25.0% |
| ! | CAACAATTAGAATTATCATG+AGG | - | chr4_4:48845564-48845583 | Msa0685020:intron | 25.0% |
| !!! | AATCACATTTTTAAGGAATG+TGG | + | chr4_4:48845628-48845647 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTATTTTCAACGG+AGG | - | chr4_4:48845654-48845673 | Msa0685020:intron | 25.0% |
| !!! | TTTTGTTTATTTTCAACGGA+GGG | - | chr4_4:48845655-48845674 | Msa0685020:intron | 25.0% |
| ! | ATTTGACATGTATTTATGAG+CGG | - | chr4_4:48845907-48845926 | Msa0685020:intron | 25.0% |
| ! | GGAAGGAGAAAAAATAATTA+AGG | - | chr4_4:48846158-48846177 | Msa0685020:intron | 25.0% |
| ! | TGATTCAATCACAAATGTAA+GGG | + | chr4_4:48846305-48846324 | None:intergenic | 25.0% |
| ! | ATGATTCAATCACAAATGTA+AGG | + | chr4_4:48846306-48846325 | None:intergenic | 25.0% |
| ! | TTTAGGCCTAAAAATACATT+GGG | + | chr4_4:48846406-48846425 | None:intergenic | 25.0% |
| !! | TTTTAGGCCTAAAAATACAT+TGG | + | chr4_4:48846407-48846426 | None:intergenic | 25.0% |
| !! | TAGGAAAACAAATGTTGATT+CGG | - | chr4_4:48847279-48847298 | Msa0685020:intron | 25.0% |
| ! | TTGATGATACTTTCATTGCT+GGG | + | chr4_4:48843094-48843113 | None:intergenic | 30.0% |
| ! | ATTGATGATACTTTCATTGC+TGG | + | chr4_4:48843095-48843114 | None:intergenic | 30.0% |
| ! | CGAATACAATATATTTGCTG+AGG | - | chr4_4:48843452-48843471 | Msa0685020:intron | 30.0% |
| CAAACAACAATGTTTAACTC+TGG | - | chr4_4:48843554-48843573 | Msa0685020:intron | 30.0% | |
| AACAACAATGTTTAACTCTG+GGG | - | chr4_4:48843556-48843575 | Msa0685020:intron | 30.0% | |
| ! | TGGTATTTGAAACTGAAAAG+AGG | + | chr4_4:48843691-48843710 | None:intergenic | 30.0% |
| !!! | ATTCTCTTTTGAGTTACTAG+GGG | + | chr4_4:48843739-48843758 | None:intergenic | 30.0% |
| !!! | CATTCTCTTTTGAGTTACTA+GGG | + | chr4_4:48843740-48843759 | None:intergenic | 30.0% |
| !!! | TCATTCTCTTTTGAGTTACT+AGG | + | chr4_4:48843741-48843760 | None:intergenic | 30.0% |
| ! | TTCATATTTTCCAATTCGGT+TGG | + | chr4_4:48843780-48843799 | None:intergenic | 30.0% |
| CAAAAACCTCAAAAAGCAAA+AGG | - | chr4_4:48843850-48843869 | Msa0685020:intron | 30.0% | |
| TCTTGTTCCTAACCTTAAAA+AGG | - | chr4_4:48843956-48843975 | Msa0685020:intron | 30.0% | |
| CATCGAACAAATTATGTATG+TGG | - | chr4_4:48844317-48844336 | Msa0685020:intron | 30.0% | |
| TATGTATGTGGTCTATTATG+TGG | - | chr4_4:48844329-48844348 | Msa0685020:intron | 30.0% | |
| TATAATAGTGACCAGGAATT+AGG | - | chr4_4:48844411-48844430 | Msa0685020:intron | 30.0% | |
| ATAATAGTGACCAGGAATTA+GGG | - | chr4_4:48844412-48844431 | Msa0685020:intron | 30.0% | |
| !! | TTTCTTAACTTGTGCCTTAA+GGG | + | chr4_4:48844560-48844579 | None:intergenic | 30.0% |
| ATACCTAAGGATACAAGTTA+AGG | + | chr4_4:48844880-48844899 | None:intergenic | 30.0% | |
| GTAATGCTAACTTATACCTA+AGG | + | chr4_4:48844893-48844912 | None:intergenic | 30.0% | |
| AAAGTATACGACTACTTTCA+AGG | + | chr4_4:48844961-48844980 | None:intergenic | 30.0% | |
| ! | CGGAAAGATTTTAAATGTTG+AGG | + | chr4_4:48845263-48845282 | None:intergenic | 30.0% |
| AGAGAATATTAGGAGTAAGT+TGG | + | chr4_4:48845322-48845341 | None:intergenic | 30.0% | |
| CTTCAAACACACTTGAAAAT+TGG | - | chr4_4:48845375-48845394 | Msa0685020:intron | 30.0% | |
| GGTCAATGTTACCTATAAAA+AGG | - | chr4_4:48845396-48845415 | Msa0685020:intron | 30.0% | |
| GCTGTATTAATTACTACAAG+TGG | + | chr4_4:48845524-48845543 | None:intergenic | 30.0% | |
| !! | CTTCTTTTAAAGATGAGTAG+TGG | - | chr4_4:48846093-48846112 | Msa0685020:intron | 30.0% |
| GGTTTAGAAAACAAATACTC+CGG | - | chr4_4:48846265-48846284 | Msa0685020:intron | 30.0% | |
| TATAGAATCACTTTCGATTG+AGG | + | chr4_4:48846457-48846476 | None:intergenic | 30.0% | |
| CAAAATAATGAAGCCTAACA+CGG | - | chr4_4:48846843-48846862 | Msa0685020:CDS | 30.0% | |
| !!! | TTTAGGCCCTCAAATTTTTT+AGG | + | chr4_4:48846871-48846890 | None:intergenic | 30.0% |
| TAAAACAATGCTACATAGCA+GGG | + | chr4_4:48846927-48846946 | None:intergenic | 30.0% | |
| ATCTGTAAAAATCTGCTAGA+TGG | - | chr4_4:48847055-48847074 | Msa0685020:intron | 30.0% | |
| GAAAGAGCTTAAAAATCGTT+TGG | - | chr4_4:48847115-48847134 | Msa0685020:intron | 30.0% | |
| TAAAAATCGTTTGGAAGTTG+TGG | - | chr4_4:48847124-48847143 | Msa0685020:intron | 30.0% | |
| TGAGACAAATCTTGGAGATT+TGG | + | chr4_4:48843363-48843382 | None:intergenic | 35.0% | |
| AATTTCCTTGATGCTGATGT+AGG | - | chr4_4:48843486-48843505 | Msa0685020:intron | 35.0% | |
| !! | TGACTTGCTGAGATTATTTG+TGG | + | chr4_4:48843589-48843608 | None:intergenic | 35.0% |
| !! | GATGGTGATGGAGAAATATT+TGG | + | chr4_4:48843663-48843682 | None:intergenic | 35.0% |
| AACTGAAAAGAGGAGTTAGA+TGG | + | chr4_4:48843681-48843700 | None:intergenic | 35.0% | |
| !!! | TTCTCTTTTGAGTTACTAGG+GGG | + | chr4_4:48843738-48843757 | None:intergenic | 35.0% |
| ACTCAACAGAAACCTCAAAA+GGG | - | chr4_4:48843802-48843821 | Msa0685020:intron | 35.0% | |
| ! | ATTTTCCAATGACCCTTTTG+AGG | + | chr4_4:48843817-48843836 | None:intergenic | 35.0% |
| !! | ACTACTTAGCGTTGATAGTT+TGG | - | chr4_4:48844036-48844055 | Msa0685020:intron | 35.0% |
| !! | CTACTTAGCGTTGATAGTTT+GGG | - | chr4_4:48844037-48844056 | Msa0685020:intron | 35.0% |
| GATTACATAGATACTCCTTC+CGG | - | chr4_4:48844265-48844284 | Msa0685020:intron | 35.0% | |
| TGGTCAAACATTGACATGTA+TGG | - | chr4_4:48844439-48844458 | Msa0685020:intron | 35.0% | |
| AATGATATCTTGTGCCCTTA+AGG | - | chr4_4:48844543-48844562 | Msa0685020:intron | 35.0% | |
| !! | GTTTCTTAACTTGTGCCTTA+AGG | + | chr4_4:48844561-48844580 | None:intergenic | 35.0% |
| !! | GATCCTTAACTTGTATCCTT+AGG | - | chr4_4:48844874-48844893 | Msa0685020:intron | 35.0% |
| GACATAAATCATCAAGACCA+AGG | - | chr4_4:48845206-48845225 | Msa0685020:intron | 35.0% | |
| ! | GAATATTAGGAGTAAGTTGG+TGG | + | chr4_4:48845319-48845338 | None:intergenic | 35.0% |
| TTGTTTAACATGTGCCCTTA+GGG | + | chr4_4:48845738-48845757 | None:intergenic | 35.0% | |
| ATTGTTTAACATGTGCCCTT+AGG | + | chr4_4:48845739-48845758 | None:intergenic | 35.0% | |
| !! | ACACATTAACTTGTGCCTTA+AGG | - | chr4_4:48845832-48845851 | Msa0685020:intron | 35.0% |
| !! | CACATTAACTTGTGCCTTAA+GGG | - | chr4_4:48845833-48845852 | Msa0685020:intron | 35.0% |
| !! | AATGTTAACTTGTGCCCTTA+AGG | + | chr4_4:48845850-48845869 | None:intergenic | 35.0% |
| AAGGGTTTCGATATATACTC+CGG | + | chr4_4:48846287-48846306 | None:intergenic | 35.0% | |
| TTGACAATTACTCTGTAGCA+GGG | - | chr4_4:48846376-48846395 | Msa0685020:intron | 35.0% | |
| CTTTCGATTGAGGAAACTTA+TGG | + | chr4_4:48846447-48846466 | None:intergenic | 35.0% | |
| AGTGGTATGTAATTCGATGT+CGG | + | chr4_4:48846768-48846787 | None:intergenic | 35.0% | |
| !!! | AATTTTTTAGGCTCCGTGTT+AGG | + | chr4_4:48846859-48846878 | None:intergenic | 35.0% |
| ACGGAGCCTAAAAAATTTGA+GGG | - | chr4_4:48846862-48846881 | Msa0685020:CDS | 35.0% | |
| GTAAAACAATGCTACATAGC+AGG | + | chr4_4:48846928-48846947 | None:intergenic | 35.0% | |
| ! | GATAGTGTTGAATGTGTTGT+TGG | - | chr4_4:48847227-48847246 | Msa0685020:intron | 35.0% |
| ! | ATACAATGTCAAGAGCACAA+GGG | - | chr4_4:48847302-48847321 | Msa0685020:intron | 35.0% |
| !! | GGGGCTTTTGGTTAAAATAA+TGG | - | chr4_4:48847322-48847341 | Msa0685020:intron | 35.0% |
| TCAAGTGTAGAATCTCCAAA+GGG | + | chr4_4:48847395-48847414 | None:intergenic | 35.0% | |
| AAGTATCATCAATCAGCAGC+TGG | - | chr4_4:48843102-48843121 | Msa0685020:CDS | 40.0% | |
| !! | TTGTGACGGATATTCTGAAG+TGG | + | chr4_4:48843263-48843282 | None:intergenic | 40.0% |
| ACTTCAGAATATCCGTCACA+AGG | - | chr4_4:48843262-48843281 | Msa0685020:CDS | 40.0% | |
| CTTCAGAATATCCGTCACAA+GGG | - | chr4_4:48843263-48843282 | Msa0685020:CDS | 40.0% | |
| CCAAACGTTGAGACAAATCT+TGG | + | chr4_4:48843371-48843390 | None:intergenic | 40.0% | |
| CCAAGATTTGTCTCAACGTT+TGG | - | chr4_4:48843368-48843387 | Msa0685020:CDS | 40.0% | |
| CATCAGCATCAAGGAAATTC+AGG | + | chr4_4:48843485-48843504 | None:intergenic | 40.0% | |
| GCTGAGATTATTTGTGGAAG+TGG | + | chr4_4:48843583-48843602 | None:intergenic | 40.0% | |
| AAAGAGGAGTTAGATGGTGA+TGG | + | chr4_4:48843675-48843694 | None:intergenic | 40.0% | |
| AGTTACTAGGGGGTGAATTT+GGG | + | chr4_4:48843728-48843747 | None:intergenic | 40.0% | |
| CACTCAACAGAAACCTCAAA+AGG | - | chr4_4:48843801-48843820 | Msa0685020:intron | 40.0% | |
| AGAAACCTCAAAAGGGTCAT+TGG | - | chr4_4:48843809-48843828 | Msa0685020:intron | 40.0% | |
| TCATGGTAAGGATCACATCA+TGG | - | chr4_4:48843881-48843900 | Msa0685020:intron | 40.0% | |
| AGCGCAAGGAGTCATAATAT+AGG | - | chr4_4:48844474-48844493 | Msa0685020:intron | 40.0% | |
| ATTCTTAACATGTGCCCTCA+GGG | - | chr4_4:48844682-48844701 | Msa0685020:intron | 40.0% | |
| GAGTTTATGAACCCGAAACA+CGG | - | chr4_4:48844990-48845009 | Msa0685020:intron | 40.0% | |
| TCTTATAAAAAGGGCCGAAG+AGG | - | chr4_4:48845443-48845462 | Msa0685020:intron | 40.0% | |
| TCATGTTATCTTGTGCCCTA+AGG | - | chr4_4:48845720-48845739 | Msa0685020:intron | 40.0% | |
| CATGTTATCTTGTGCCCTAA+GGG | - | chr4_4:48845721-48845740 | Msa0685020:intron | 40.0% | |
| GACATGTATTTATGAGCGGA+TGG | - | chr4_4:48845911-48845930 | Msa0685020:intron | 40.0% | |
| ! | AGCGGATGGAGTACTAATAT+AGG | - | chr4_4:48845925-48845944 | Msa0685020:intron | 40.0% |
| GTTGACAATTACTCTGTAGC+AGG | - | chr4_4:48846375-48846394 | Msa0685020:intron | 40.0% | |
| CACGGAGCCTAAAAAATTTG+AGG | - | chr4_4:48846861-48846880 | Msa0685020:CDS | 40.0% | |
| AAGAATCTTCATCGCTGCAT+AGG | + | chr4_4:48847196-48847215 | None:intergenic | 40.0% | |
| !! | TGTTGGTTCACCATTTCAAG+TGG | - | chr4_4:48847244-48847263 | Msa0685020:intron | 40.0% |
| ACTCTTGCTTCCACTTGAAA+TGG | + | chr4_4:48847257-48847276 | None:intergenic | 40.0% | |
| !! | CAAGTGGAAGCAAGAGTATT+AGG | - | chr4_4:48847260-48847279 | Msa0685020:intron | 40.0% |
| ! | GATACAATGTCAAGAGCACA+AGG | - | chr4_4:48847301-48847320 | Msa0685020:intron | 40.0% |
| ! | TACAATGTCAAGAGCACAAG+GGG | - | chr4_4:48847303-48847322 | Msa0685020:intron | 40.0% |
| AATAGCAGTGTCTTACCCTT+TGG | - | chr4_4:48847377-48847396 | Msa0685020:CDS | 40.0% | |
| GTCAAGTGTAGAATCTCCAA+AGG | + | chr4_4:48847396-48847415 | None:intergenic | 40.0% | |
| CAGCAGCTGGTTAACTGATT+TGG | - | chr4_4:48843115-48843134 | Msa0685020:CDS | 45.0% | |
| TAGGCTTATGTCCCTTGTGA+CGG | + | chr4_4:48843277-48843296 | None:intergenic | 45.0% | |
| TTCCTTGATGCTGATGTAGG+AGG | - | chr4_4:48843489-48843508 | Msa0685020:intron | 45.0% | |
| TCCTTGATGCTGATGTAGGA+GGG | - | chr4_4:48843490-48843509 | Msa0685020:intron | 45.0% | |
| TTTGGGGGGTTGTCAAAAGA+TGG | + | chr4_4:48843711-48843730 | None:intergenic | 45.0% | |
| TTACTAGGGGGTGAATTTGG+GGG | + | chr4_4:48843726-48843745 | None:intergenic | 45.0% | |
| GTTACTAGGGGGTGAATTTG+GGG | + | chr4_4:48843727-48843746 | None:intergenic | 45.0% | |
| GAGTTACTAGGGGGTGAATT+TGG | + | chr4_4:48843729-48843748 | None:intergenic | 45.0% | |
| ATCAGTGTCTCCAACCGAAT+TGG | - | chr4_4:48843767-48843786 | Msa0685020:intron | 45.0% | |
| !!! | ACGAGGCCTTTTGCTTTTTG+AGG | + | chr4_4:48843859-48843878 | None:intergenic | 45.0% |
| TGCAAGAGCAATGAAGGTCT+GGG | + | chr4_4:48843934-48843953 | None:intergenic | 45.0% | |
| AAGAGCTGCAAGAGCAATGA+AGG | + | chr4_4:48843940-48843959 | None:intergenic | 45.0% | |
| TGACCAGGAATTAGGGTACA+TGG | - | chr4_4:48844419-48844438 | Msa0685020:intron | 45.0% | |
| TGACCATGTACCCTAATTCC+TGG | + | chr4_4:48844425-48844444 | None:intergenic | 45.0% | |
| GGCATGTATTTATGAGCGCA+AGG | - | chr4_4:48844460-48844479 | Msa0685020:intron | 45.0% | |
| GATTCTTAACATGTGCCCTC+AGG | - | chr4_4:48844681-48844700 | Msa0685020:intron | 45.0% | |
| !! | AGTGTTAACTTGTGCCCTGA+GGG | + | chr4_4:48844699-48844718 | None:intergenic | 45.0% |
| !! | TAGTGTTAACTTGTGCCCTG+AGG | + | chr4_4:48844700-48844719 | None:intergenic | 45.0% |
| TTTATGAACCCGAAACACGG+TGG | - | chr4_4:48844993-48845012 | Msa0685020:intron | 45.0% | |
| GGCCTAAAAATACATTGGGC+CGG | + | chr4_4:48846402-48846421 | None:intergenic | 45.0% | |
| ATGTTCACTCGAAGCTCAAG+TGG | + | chr4_4:48846786-48846805 | None:intergenic | 45.0% | |
| !!! | TTATATTTTAAAAATATTGA+AGG | - | chr4_4:48844157-48844176 | Msa0685020:intron | 5.0% |
| !! | ATATAATAAAAAAATGAAAA+AGG | - | chr4_4:48846124-48846143 | Msa0685020:intron | 5.0% |
| ACCCTCCTACATCAGCATCA+AGG | + | chr4_4:48843494-48843513 | None:intergenic | 50.0% | |
| TACTAGGGGGTGAATTTGGG+GGG | + | chr4_4:48843725-48843744 | None:intergenic | 50.0% | |
| TGATCCTTACCATGAGCACG+AGG | + | chr4_4:48843876-48843895 | None:intergenic | 50.0% | |
| CTGCAAGAGCAATGAAGGTC+TGG | + | chr4_4:48843935-48843954 | None:intergenic | 50.0% | |
| TTGATAGGCCACCGTGTTTC+GGG | + | chr4_4:48845004-48845023 | None:intergenic | 50.0% | |
| ! | GTTGATAGGCCACCGTGTTT+CGG | + | chr4_4:48845005-48845024 | None:intergenic | 50.0% |
| CAATTACTCTGTAGCAGGGC+CGG | - | chr4_4:48846380-48846399 | Msa0685020:intron | 50.0% | |
| ! | GGCCGGCCCAATGTATTTTT+AGG | - | chr4_4:48846397-48846416 | Msa0685020:intron | 50.0% |
| !! | ACATAGCAGGGCTGGTCTAA+GGG | + | chr4_4:48846915-48846934 | None:intergenic | 50.0% |
| !! | TACATAGCAGGGCTGGTCTA+AGG | + | chr4_4:48846916-48846935 | None:intergenic | 50.0% |
| ACAATGCTACATAGCAGGGC+TGG | + | chr4_4:48846923-48846942 | None:intergenic | 50.0% | |
| ATCGCTGCATAGGCATGGTT+TGG | + | chr4_4:48847186-48847205 | None:intergenic | 50.0% | |
| TCTTCATCGCTGCATAGGCA+TGG | + | chr4_4:48847191-48847210 | None:intergenic | 50.0% | |
| !! | TCAAGAGCACAAGGGGCTTT+TGG | - | chr4_4:48847310-48847329 | Msa0685020:intron | 50.0% |
| AGCAAAAGGCCTCGTGCTCA+TGG | - | chr4_4:48843864-48843883 | Msa0685020:intron | 55.0% | |
| AAGGCCTCGTGCTCATGGTA+AGG | - | chr4_4:48843869-48843888 | Msa0685020:intron | 55.0% | |
| GCCTAAAGCCCCTGCTTTAG+TGG | - | chr4_4:48846884-48846903 | Msa0685020:CDS | 55.0% | |
| GCCACTAAAGCAGGGGCTTT+AGG | + | chr4_4:48846888-48846907 | None:intergenic | 55.0% | |
| AGGGGACTGCCACTAAAGCA+GGG | + | chr4_4:48846896-48846915 | None:intergenic | 55.0% | |
| AAGGGGACTGCCACTAAAGC+AGG | + | chr4_4:48846897-48846916 | None:intergenic | 55.0% | |
| !! | CATAGCAGGGCTGGTCTAAG+GGG | + | chr4_4:48846914-48846933 | None:intergenic | 55.0% |
| GGGGACTGCCACTAAAGCAG+GGG | + | chr4_4:48846895-48846914 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 48843074 | 48847433 | 48843074 | ID=Msa0685020;Name=Msa0685020 |
| chr4_4 | mRNA | 48843074 | 48847433 | 48843074 | ID=Msa0685020-mRNA-1;Parent=Msa0685020;Name=Msa0685020-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|3|0|319 |
| chr4_4 | exon | 48847371 | 48847433 | 48847371 | ID=Msa0685020-mRNA-1:exon:12118;Parent=Msa0685020-mRNA-1 |
| chr4_4 | exon | 48846530 | 48847063 | 48846530 | ID=Msa0685020-mRNA-1:exon:12117;Parent=Msa0685020-mRNA-1 |
| chr4_4 | exon | 48843074 | 48843433 | 48843074 | ID=Msa0685020-mRNA-1:exon:12116;Parent=Msa0685020-mRNA-1 |
| chr4_4 | CDS | 48847371 | 48847433 | 48847371 | ID=Msa0685020-mRNA-1:cds;Parent=Msa0685020-mRNA-1 |
| chr4_4 | CDS | 48846530 | 48847063 | 48846530 | ID=Msa0685020-mRNA-1:cds;Parent=Msa0685020-mRNA-1 |
| chr4_4 | CDS | 48843074 | 48843433 | 48843074 | ID=Msa0685020-mRNA-1:cds;Parent=Msa0685020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
