AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0714450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0714450 MtrunA17_Chr5g0401671 95.294 595 28 0 1 595 1 595 0.0 1129
Msa0714450 MtrunA17_Chr5g0401661 87.267 589 58 4 9 595 112 685 0.0 995
Msa0714450 MtrunA17_Chr4g0053651 72.864 597 141 4 1 595 1 578 0.0 897
Msa0714450 MtrunA17_Chr4g0067151 27.300 337 221 10 220 551 5 322 3.57e-30 121
Msa0714450 MtrunA17_Chr4g0067151 26.160 237 155 4 339 564 19 246 3.52e-21 95.1
Msa0714450 MtrunA17_Chr4g0067151 25.532 235 146 5 238 462 111 326 4.58e-18 85.9
Msa0714450 MtrunA17_Chr4g0067151 25.595 168 106 3 424 581 21 179 4.19e-14 73.9
Msa0714450 MtrunA17_Chr1g0176241 26.893 383 189 8 243 550 115 481 2.27e-28 119
Msa0714450 MtrunA17_Chr1g0176241 32.927 164 103 5 403 565 134 291 8.57e-17 83.6
Msa0714450 MtrunA17_Chr1g0176241 22.054 331 180 9 341 594 113 442 6.36e-16 80.9
Msa0714450 MtrunA17_Chr3g0136971 25.610 328 200 8 241 565 344 630 3.27e-27 116
Msa0714450 MtrunA17_Chr3g0136971 26.154 260 173 4 237 494 409 651 9.69e-19 90.1
Msa0714450 MtrunA17_Chr3g0136971 22.932 266 157 6 362 592 363 615 2.32e-17 85.9
Msa0714450 MtrunA17_Chr3g0136971 25.126 199 111 3 425 594 344 533 2.05e-12 70.1
Msa0714450 MtrunA17_Chr1g0200901 27.532 316 159 9 240 552 73 321 8.23e-27 113
Msa0714450 MtrunA17_Chr1g0200901 22.764 246 133 6 320 560 95 288 3.22e-12 68.6
Msa0714450 MtrunA17_Chr1g0200901 26.027 219 145 5 243 460 202 404 1.61e-11 66.6
Msa0714450 MtrunA17_Chr1g0172501 29.310 232 155 2 321 551 330 553 1.87e-26 114
Msa0714450 MtrunA17_Chr1g0172501 24.783 230 145 4 349 568 274 485 2.71e-17 85.5
Msa0714450 MtrunA17_Chr1g0172501 25.114 219 144 3 243 458 352 553 3.45e-15 78.6
Msa0714450 MtrunA17_Chr1g0172501 27.586 174 114 4 423 594 307 470 5.46e-11 65.5
Msa0714450 MtrunA17_Chr8g0352821 27.832 309 205 8 287 588 164 461 2.49e-26 114
Msa0714450 MtrunA17_Chr3g0093681 29.310 232 155 2 321 551 330 553 4.55e-26 112
Msa0714450 MtrunA17_Chr3g0093681 24.783 230 145 4 349 568 274 485 2.35e-17 85.5
Msa0714450 MtrunA17_Chr3g0093681 25.114 219 144 3 243 458 352 553 6.20e-15 77.8
Msa0714450 MtrunA17_Chr3g0093681 27.586 174 114 4 423 594 307 470 4.71e-11 65.5
Msa0714450 MtrunA17_Chr6g0448921 29.537 281 168 9 320 590 31 291 1.47e-25 112
Msa0714450 MtrunA17_Chr6g0448921 24.194 186 130 2 383 566 10 186 4.89e-18 88.2
Msa0714450 MtrunA17_Chr6g0448921 28.324 173 113 3 423 593 9 172 2.52e-17 85.9
Msa0714450 MtrunA17_Chr2g0281451 29.487 234 153 4 320 551 30 253 3.90e-23 104
Msa0714450 MtrunA17_Chr2g0281451 24.731 186 129 2 383 566 9 185 1.83e-17 86.7
Msa0714450 MtrunA17_Chr2g0281451 28.324 173 113 4 423 593 8 171 3.34e-15 79.3
Msa0714450 MtrunA17_Chr1g0185501 25.872 344 184 11 243 581 23 300 8.74e-23 99.4
Msa0714450 MtrunA17_Chr1g0185501 24.000 225 160 3 342 564 22 237 1.01e-20 93.6
Msa0714450 MtrunA17_Chr1g0185501 31.447 159 99 2 424 581 21 170 1.18e-18 87.4
Msa0714450 MtrunA17_Chr1g0185501 26.754 228 138 7 240 457 104 312 1.40e-15 78.2
Msa0714450 MtrunA17_Chr7g0253861 26.336 262 171 7 343 592 51 302 1.86e-22 99.0
Msa0714450 MtrunA17_Chr7g0253861 27.692 325 196 11 237 549 45 342 3.54e-22 98.2
Msa0714450 MtrunA17_Chr7g0253861 30.114 176 112 3 421 594 46 212 1.48e-14 75.5
Msa0714450 MtrunA17_Chr5g0405851 24.444 315 214 5 245 551 152 450 6.59e-22 99.0
Msa0714450 MtrunA17_Chr5g0405851 26.577 222 138 4 355 560 162 374 6.64e-17 83.6
Msa0714450 MtrunA17_Chr5g0405851 29.448 163 102 5 442 594 166 325 1.89e-14 75.9
Msa0714450 MtrunA17_Chr5g0405851 25.561 223 138 5 243 458 249 450 5.51e-14 74.7
Msa0714450 MtrunA17_Chr1g0171711 27.778 234 153 7 341 571 503 723 6.88e-21 97.4
Msa0714450 MtrunA17_Chr1g0171711 25.000 328 195 10 235 550 497 785 1.40e-16 83.6
Msa0714450 MtrunA17_Chr1g0171711 23.630 292 204 8 304 590 507 784 5.09e-15 78.6
Msa0714450 MtrunA17_Chr7g0266251 27.647 340 157 14 239 549 8 287 1.24e-19 90.5
Msa0714450 MtrunA17_Chr7g0266251 25.660 265 126 9 309 550 19 235 3.62e-18 86.3
Msa0714450 MtrunA17_Chr7g0266251 26.877 253 136 9 240 459 106 342 9.42e-14 72.8
Msa0714450 MtrunA17_Chr7g0266251 26.776 183 108 7 423 588 9 182 1.95e-12 68.9
Msa0714450 MtrunA17_Chr7g0246741 25.407 307 159 7 308 592 371 629 3.04e-19 92.0
Msa0714450 MtrunA17_Chr7g0246741 25.628 199 94 4 428 581 367 556 3.98e-14 75.9
Msa0714450 MtrunA17_Chr8g0392701 30.909 220 137 6 360 571 29 241 1.56e-18 87.0
Msa0714450 MtrunA17_Chr8g0392701 26.295 251 163 8 320 559 30 269 2.20e-15 77.8
Msa0714450 MtrunA17_Chr3g0144511 24.217 351 210 13 232 552 47 371 4.85e-18 86.3
Msa0714450 MtrunA17_Chr3g0144511 22.727 242 152 9 342 562 60 287 1.90e-14 75.5
Msa0714450 MtrunA17_Chr3g0095501 24.355 349 213 11 234 564 257 572 6.32e-18 87.4
Msa0714450 MtrunA17_Chr4g0070791 26.688 311 187 10 220 509 29 319 2.62e-17 83.2
Msa0714450 MtrunA17_Chr4g0070791 22.678 366 217 12 241 593 8 320 8.25e-17 82.0
Msa0714450 MtrunA17_Chr3g0103361 25.566 309 192 9 245 545 17 295 1.84e-16 80.9
Msa0714450 MtrunA17_Chr3g0103361 28.409 176 109 4 424 593 13 177 7.67e-15 75.9
Msa0714450 MtrunA17_Chr3g0103361 24.113 282 155 9 307 581 20 249 1.42e-12 68.9
Msa0714450 MtrunA17_Chr7g0267961 23.711 291 173 7 309 552 142 430 1.87e-16 82.4
Msa0714450 MtrunA17_Chr3g0138311 25.614 285 157 10 309 550 624 896 2.03e-16 83.2
Msa0714450 MtrunA17_Chr2g0295791 24.651 215 150 3 332 544 155 359 2.39e-16 82.0
Msa0714450 MtrunA17_Chr2g0295791 27.160 162 109 1 399 560 181 333 1.77e-14 76.3
Msa0714450 MtrunA17_Chr2g0295791 21.534 339 229 7 236 564 159 470 4.90e-13 71.6
Msa0714450 MtrunA17_Chr7g0233651 22.772 303 135 7 301 552 160 414 9.42e-16 79.7
Msa0714450 MtrunA17_Chr2g0283891 28.571 182 115 7 420 595 97 269 1.02e-15 78.6
Msa0714450 MtrunA17_Chr5g0442391 25.602 332 202 10 235 553 252 551 1.15e-15 80.1
Msa0714450 MtrunA17_Chr5g0442391 27.011 174 113 4 423 592 257 420 1.60e-11 67.0
Msa0714450 MtrunA17_Chr4g0057141 23.469 490 276 17 123 582 215 635 1.37e-15 80.1
Msa0714450 MtrunA17_Chr2g0284241 24.299 321 197 10 261 564 22 313 1.45e-15 78.2
Msa0714450 MtrunA17_Chr4g0069701 33.793 145 94 2 320 462 78 222 2.42e-15 79.7
Msa0714450 MtrunA17_Chr4g0069701 24.149 323 199 9 243 550 402 693 4.30e-14 75.9
Msa0714450 MtrunA17_Chr7g0228191 22.642 265 158 4 334 552 56 319 2.51e-15 77.8
Msa0714450 MtrunA17_Chr2g0307941 21.552 348 197 8 244 581 15 296 2.86e-15 79.7
Msa0714450 MtrunA17_Chr2g0307941 24.042 287 177 8 235 509 50 307 1.75e-14 77.0
Msa0714450 MtrunA17_Chr2g0307941 26.000 200 130 3 401 592 34 223 5.60e-12 68.9
Msa0714450 MtrunA17_Chr4g0026671 22.817 355 204 8 309 593 16 370 3.72e-15 79.3
Msa0714450 MtrunA17_Chr2g0321211 23.295 352 202 9 309 593 16 366 8.10e-15 78.2
Msa0714450 MtrunA17_Chr4g0059031 28.962 183 118 3 405 581 77 253 9.47e-15 77.8
Msa0714450 MtrunA17_Chr4g0059031 25.203 246 158 7 320 550 419 653 3.65e-14 75.9
Msa0714450 MtrunA17_Chr4g0059031 22.628 274 186 7 306 562 359 623 1.09e-12 71.2
Msa0714450 MtrunA17_Chr4g0059031 21.739 299 180 9 229 508 390 653 4.85e-11 65.9
Msa0714450 MtrunA17_Chr7g0235181 25.475 263 172 10 304 552 152 404 1.05e-14 76.6
Msa0714450 MtrunA17_Chr2g0282401 26.360 239 153 9 343 576 508 728 1.26e-14 77.4
Msa0714450 MtrunA17_Chr2g0282401 23.404 329 216 10 226 550 491 787 6.21e-12 68.6
Msa0714450 MtrunA17_Chr5g0395821 23.288 292 163 8 312 550 143 426 1.78e-14 75.9
Msa0714450 MtrunA17_Chr1g0185891 23.029 482 280 16 129 582 156 574 2.39e-14 76.3
Msa0714450 MtrunA17_Chr2g0331961 28.194 227 148 5 346 567 100 316 2.77e-14 74.3
Msa0714450 MtrunA17_Chr3g0111961 23.630 292 158 9 312 552 185 462 3.49e-14 75.5
Msa0714450 MtrunA17_Chr5g0438901 21.884 329 219 11 290 591 356 673 6.30e-14 75.1
Msa0714450 MtrunA17_Chr4g0004241 22.780 259 181 6 338 588 6 253 9.97e-14 74.7
Msa0714450 MtrunA17_Chr4g0004241 21.477 298 222 5 298 590 7 297 6.49e-13 72.0
Msa0714450 MtrunA17_Chr2g0308501 27.111 225 145 8 305 520 16 230 1.11e-13 72.8
Msa0714450 MtrunA17_Chr2g0292301 26.293 232 162 5 243 469 145 372 1.27e-13 73.6
Msa0714450 MtrunA17_Chr1g0148791 25.333 225 145 8 355 571 630 839 2.03e-13 73.6
Msa0714450 MtrunA17_Chr1g0148791 22.785 316 221 9 261 567 576 877 7.22e-13 72.0
Msa0714450 MtrunA17_Chr1g0148791 28.834 163 103 4 432 592 624 775 9.75e-12 68.2
Msa0714450 MtrunA17_Chr2g0331981 22.780 259 181 6 338 588 6 253 2.23e-13 73.6
Msa0714450 MtrunA17_Chr2g0331981 21.141 298 223 5 298 590 7 297 1.05e-12 71.2
Msa0714450 MtrunA17_Chr3g0098921 23.693 287 169 9 312 550 147 431 2.34e-13 72.4
Msa0714450 MtrunA17_Chr2g0322171 25.869 259 148 8 307 561 11 229 2.70e-13 71.2
Msa0714450 MtrunA17_Chr4g0036951 26.977 215 110 7 343 553 158 329 5.98e-13 70.9
Msa0714450 MtrunA17_Chr8g0383711 19.375 320 228 7 234 550 5 297 7.33e-13 69.7
Msa0714450 MtrunA17_Chr3g0099061 21.053 323 223 8 241 550 208 511 1.18e-12 70.5
Msa0714450 MtrunA17_Chr3g0099061 25.444 169 123 3 428 594 212 379 1.23e-12 70.5
Msa0714450 MtrunA17_Chr4g0058091 24.172 302 166 7 340 590 223 512 1.23e-12 70.5
Msa0714450 MtrunA17_Chr7g0234591 24.719 267 176 11 301 552 157 413 2.27e-12 69.3
Msa0714450 MtrunA17_Chr7g0234591 23.622 254 173 7 309 550 123 367 4.13e-12 68.6
Msa0714450 MtrunA17_Chr2g0294611 21.130 407 216 15 239 561 236 621 2.30e-12 70.5
Msa0714450 MtrunA17_Chr1g0168391 23.228 254 146 5 309 561 227 432 2.54e-12 69.7
Msa0714450 MtrunA17_Chr1g0168391 22.814 263 186 9 297 550 257 511 1.63e-11 67.0
Msa0714450 MtrunA17_Chr1g0194721 21.981 414 202 17 243 561 238 625 2.60e-12 70.5
Msa0714450 MtrunA17_Chr1g0194721 35.878 131 72 4 423 550 235 356 4.15e-11 66.2
Msa0714450 MtrunA17_Chr7g0237241 24.506 253 172 8 309 556 501 739 3.01e-12 69.7
Msa0714450 MtrunA17_Chr8g0388841 25.751 233 139 8 346 576 266 466 4.02e-12 69.3
Msa0714450 MtrunA17_Chr8g0390861 21.992 241 172 3 320 557 883 1110 4.05e-12 69.7
Msa0714450 MtrunA17_Chr1g0183051 25.000 316 189 10 234 512 203 507 5.00e-12 68.6
Msa0714450 MtrunA17_Chr4g0047051 25.191 262 163 12 301 550 67 307 8.44e-12 66.6
Msa0714450 MtrunA17_Chr1g0146771 26.383 235 140 8 343 576 255 457 1.02e-11 67.8
Msa0714450 MtrunA17_Chr8g0384161 23.967 363 199 13 246 544 11 360 1.19e-11 67.8
Msa0714450 MtrunA17_Chr8g0392731 23.237 241 162 8 341 567 53 284 1.75e-11 67.0
Msa0714450 MtrunA17_Chr1g0197551 23.346 257 150 8 309 552 96 318 2.49e-11 67.0
Msa0714450 MtrunA17_Chr3g0116561 23.022 278 196 6 321 590 240 507 2.79e-11 66.2
Msa0714450 MtrunA17_Chr2g0308391 23.030 330 228 12 235 550 114 431 3.12e-11 65.9
Msa0714450 MtrunA17_Chr3g0132771 21.805 266 164 7 311 568 2982 3211 3.49e-11 66.6
Msa0714450 MtrunA17_Chr7g0262491 25.455 275 158 10 242 480 148 411 3.67e-11 65.5
Msa0714450 MtrunA17_Chr7g0237271 24.314 255 170 9 309 556 510 748 4.59e-11 65.9
Msa0714450 MtrunA17_Chr4g0057131 20.833 240 153 2 350 552 212 451 6.66e-11 65.1
Msa0714450 MtrunA17_Chr1g0191191 22.222 288 192 8 313 581 85 359 7.53e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0714450 AT5G67320.1 63.518 614 204 5 1 595 1 613 0.0 771
Msa0714450 AT3G49660.1 27.885 312 204 9 243 551 20 313 2.29e-29 119
Msa0714450 AT3G49660.1 24.348 230 158 4 342 564 19 239 2.66e-20 92.4
Msa0714450 AT3G49660.1 25.322 233 147 5 238 462 104 317 4.80e-20 92.0
Msa0714450 AT3G49660.1 23.875 289 197 9 289 564 6 284 2.44e-19 89.7
Msa0714450 AT3G49660.1 28.659 164 102 3 424 581 18 172 3.37e-15 77.4
Msa0714450 AT2G41500.1 23.146 445 298 10 123 551 120 536 1.93e-27 117
Msa0714450 AT2G41500.1 30.323 155 96 4 442 594 267 411 9.48e-17 84.0
Msa0714450 AT2G41500.1 26.699 206 139 4 349 552 257 452 3.19e-16 82.4
Msa0714450 AT2G41500.1 27.528 178 116 4 420 595 288 454 4.07e-13 72.8
Msa0714450 AT2G41500.2 23.146 445 298 10 123 551 120 536 1.93e-27 117
Msa0714450 AT2G41500.2 30.323 155 96 4 442 594 267 411 9.48e-17 84.0
Msa0714450 AT2G41500.2 26.699 206 139 4 349 552 257 452 3.19e-16 82.4
Msa0714450 AT2G41500.2 27.528 178 116 4 420 595 288 454 4.07e-13 72.8
Msa0714450 AT5G52820.1 25.199 377 224 9 243 581 105 461 6.28e-26 111
Msa0714450 AT5G52820.1 29.781 319 176 13 243 550 190 471 5.81e-25 108
Msa0714450 AT5G52820.1 22.727 330 177 9 342 594 104 432 1.00e-14 77.4
Msa0714450 AT5G52820.1 25.532 282 159 9 237 508 231 471 1.32e-13 73.9
Msa0714450 AT5G25150.1 24.773 331 195 8 241 565 347 629 4.11e-25 110
Msa0714450 AT5G25150.1 25.091 275 138 6 237 510 408 615 1.56e-16 83.6
Msa0714450 AT5G25150.1 28.342 187 116 4 425 594 347 532 7.23e-13 72.0
Msa0714450 AT5G25150.2 24.773 331 195 8 241 565 347 629 4.86e-25 110
Msa0714450 AT5G25150.2 25.091 275 138 6 237 510 408 615 1.56e-16 83.6
Msa0714450 AT5G25150.2 28.342 187 116 4 425 594 347 532 7.65e-13 72.0
Msa0714450 AT2G26060.2 28.274 336 153 10 243 549 16 292 1.11e-24 105
Msa0714450 AT2G26060.2 25.385 260 129 7 315 557 36 247 6.98e-16 79.7
Msa0714450 AT2G26060.2 24.675 231 130 8 240 440 111 327 4.65e-11 65.1
Msa0714450 AT2G26060.1 28.274 336 153 10 243 549 16 292 1.43e-24 105
Msa0714450 AT2G26060.1 25.385 260 129 7 315 557 36 247 9.47e-16 79.7
Msa0714450 AT2G26060.1 26.587 252 139 9 240 459 111 348 3.97e-15 77.8
Msa0714450 AT2G32700.7 26.816 358 218 13 203 550 482 805 1.99e-24 108
Msa0714450 AT2G32700.2 27.052 329 201 12 227 550 492 786 2.74e-24 108
Msa0714450 AT2G32700.5 27.052 329 201 12 227 550 492 786 2.74e-24 108
Msa0714450 AT2G32700.1 27.052 329 201 12 227 550 492 786 2.74e-24 108
Msa0714450 AT2G32700.4 27.052 329 201 12 227 550 492 786 2.74e-24 108
Msa0714450 AT2G32700.3 27.052 329 201 12 227 550 492 786 2.74e-24 108
Msa0714450 AT2G32700.6 27.052 329 201 12 227 550 490 784 3.12e-24 108
Msa0714450 AT2G43770.1 27.481 262 168 7 343 592 49 300 1.98e-23 102
Msa0714450 AT2G43770.1 26.593 361 216 14 211 549 7 340 7.24e-22 97.8
Msa0714450 AT2G43770.1 30.286 175 111 3 422 594 45 210 9.91e-14 73.2
Msa0714450 AT5G13480.4 25.243 309 213 8 287 588 92 389 6.82e-23 103
Msa0714450 AT5G13480.4 27.347 245 149 5 242 457 148 392 1.80e-18 89.7
Msa0714450 AT5G13480.4 24.460 278 197 4 291 564 52 320 2.11e-18 89.7
Msa0714450 AT5G13480.2 25.243 309 213 8 287 588 115 412 7.27e-23 103
Msa0714450 AT5G13480.2 27.347 245 149 5 242 457 171 415 1.28e-18 90.1
Msa0714450 AT5G13480.2 24.188 277 197 4 291 564 77 343 3.23e-17 85.9
Msa0714450 AT5G13480.3 24.756 307 217 7 287 588 92 389 7.49e-23 103
Msa0714450 AT5G13480.3 27.347 245 149 5 242 457 148 392 1.77e-18 89.7
Msa0714450 AT5G13480.3 24.460 278 197 4 291 564 52 320 2.03e-18 89.7
Msa0714450 AT5G13480.1 25.243 309 213 8 287 588 104 401 9.01e-23 103
Msa0714450 AT5G13480.1 27.347 245 149 5 242 457 160 404 2.20e-18 89.4
Msa0714450 AT5G13480.1 24.460 278 197 4 291 564 64 332 2.78e-18 89.4
Msa0714450 AT4G02730.1 25.455 330 217 9 227 550 23 329 1.26e-22 99.8
Msa0714450 AT4G02730.1 26.354 277 162 8 328 564 25 299 5.23e-21 95.1
Msa0714450 AT4G02730.1 32.298 161 98 3 423 581 36 187 2.89e-18 86.7
Msa0714450 AT4G02730.1 23.622 254 156 8 226 462 100 332 1.29e-11 66.6
Msa0714450 AT1G11160.2 29.386 228 148 4 320 544 30 247 1.86e-22 102
Msa0714450 AT1G11160.2 25.738 237 164 4 346 579 14 241 1.44e-20 97.1
Msa0714450 AT1G11160.2 24.731 186 129 2 383 566 9 185 1.66e-16 84.0
Msa0714450 AT1G11160.2 30.636 173 109 4 423 593 8 171 5.58e-16 82.4
Msa0714450 AT1G11160.1 29.386 228 148 4 320 544 30 247 1.88e-22 102
Msa0714450 AT1G11160.1 25.738 237 164 4 346 579 14 241 1.43e-20 97.1
Msa0714450 AT1G11160.1 24.731 186 129 2 383 566 9 185 1.60e-16 84.0
Msa0714450 AT1G11160.1 30.636 173 109 4 423 593 8 171 5.53e-16 82.4
Msa0714450 AT1G11160.4 29.386 228 148 4 320 544 30 247 2.10e-22 102
Msa0714450 AT1G11160.4 25.738 237 164 4 346 579 14 241 1.50e-20 97.1
Msa0714450 AT1G11160.4 24.731 186 129 2 383 566 9 185 1.81e-16 84.0
Msa0714450 AT1G11160.4 30.636 173 109 4 423 593 8 171 6.08e-16 82.0
Msa0714450 AT1G71840.1 24.590 366 190 10 240 550 63 397 8.30e-22 98.6
Msa0714450 AT5G23430.3 27.143 280 176 9 320 590 31 291 6.76e-21 97.8
Msa0714450 AT5G23430.3 24.194 186 130 2 383 566 10 186 1.29e-17 87.4
Msa0714450 AT5G23430.3 27.168 173 115 3 423 593 9 172 2.18e-16 83.6
Msa0714450 AT5G23430.2 27.143 280 176 9 320 590 31 291 6.76e-21 97.8
Msa0714450 AT5G23430.2 24.194 186 130 2 383 566 10 186 1.29e-17 87.4
Msa0714450 AT5G23430.2 27.168 173 115 3 423 593 9 172 2.18e-16 83.6
Msa0714450 AT5G23430.1 27.143 280 176 9 320 590 31 291 6.88e-21 97.8
Msa0714450 AT5G23430.1 24.194 186 130 2 383 566 10 186 1.30e-17 87.4
Msa0714450 AT5G23430.1 27.168 173 115 3 423 593 9 172 2.25e-16 83.6
Msa0714450 AT5G08390.1 27.143 280 176 9 320 590 31 291 7.66e-21 97.8
Msa0714450 AT5G08390.1 24.194 186 130 2 383 566 10 186 5.09e-18 88.6
Msa0714450 AT5G08390.1 30.058 173 110 4 423 593 9 172 5.33e-16 82.4
Msa0714450 AT1G11160.3 28.922 204 135 2 342 544 11 205 1.03e-20 97.4
Msa0714450 AT1G11160.3 25.874 143 97 1 424 566 10 143 7.68e-14 75.5
Msa0714450 AT1G11160.3 35.088 114 72 2 481 593 17 129 4.20e-12 69.7
Msa0714450 AT1G61210.3 28.511 235 154 5 320 551 30 253 3.53e-20 95.9
Msa0714450 AT1G61210.3 26.496 234 160 4 346 576 14 238 3.31e-19 92.8
Msa0714450 AT1G61210.3 25.269 186 128 2 383 566 9 185 8.22e-17 85.1
Msa0714450 AT1G61210.3 28.324 173 113 4 423 593 8 171 4.81e-16 82.4
Msa0714450 AT1G61210.1 28.511 235 154 5 320 551 30 253 6.45e-20 95.1
Msa0714450 AT1G61210.1 26.496 234 160 4 346 576 14 238 5.78e-19 92.0
Msa0714450 AT1G61210.1 25.269 186 128 2 383 566 9 185 1.51e-16 84.3
Msa0714450 AT1G61210.1 28.324 173 113 4 423 593 8 171 5.88e-16 82.4
Msa0714450 AT1G61210.2 28.511 235 154 5 320 551 30 253 6.85e-20 94.7
Msa0714450 AT1G61210.2 26.496 234 160 4 346 576 14 238 5.93e-19 92.0
Msa0714450 AT1G61210.2 25.269 186 128 2 383 566 9 185 1.53e-16 84.3
Msa0714450 AT1G61210.2 28.324 173 113 4 423 593 8 171 6.19e-16 82.4
Msa0714450 AT5G56130.1 27.402 281 186 7 307 580 21 290 1.91e-19 90.1
Msa0714450 AT5G56130.1 23.423 333 209 11 244 570 17 309 3.45e-14 74.3
Msa0714450 AT5G56130.1 26.437 174 115 3 424 593 14 178 5.51e-13 70.9
Msa0714450 AT4G34460.4 24.251 334 205 10 243 552 56 365 2.12e-19 90.9
Msa0714450 AT4G34460.4 22.963 270 180 10 342 591 55 316 4.20e-16 80.9
Msa0714450 AT4G34460.1 24.167 360 219 12 223 552 35 370 2.79e-19 90.5
Msa0714450 AT4G34460.1 22.963 270 180 10 342 591 60 321 5.50e-16 80.5
Msa0714450 AT4G32990.1 27.809 356 172 15 239 552 12 324 8.91e-19 88.2
Msa0714450 AT4G32990.1 24.746 295 133 11 320 588 35 266 9.65e-14 73.2
Msa0714450 AT4G34460.2 25.373 268 169 8 309 552 48 308 1.18e-17 84.7
Msa0714450 AT4G34460.2 22.137 262 176 10 350 591 6 259 3.27e-13 71.2
Msa0714450 AT4G32990.2 24.478 335 151 12 239 549 12 268 3.36e-17 82.8
Msa0714450 AT4G32990.2 24.735 283 125 10 320 576 35 255 9.71e-14 72.4
Msa0714450 AT1G48630.1 28.512 242 157 7 339 571 7 241 7.98e-17 82.4
Msa0714450 AT1G48630.1 26.295 251 163 8 320 559 30 269 1.48e-15 78.6
Msa0714450 AT3G18130.1 29.545 220 140 6 360 571 29 241 1.83e-16 81.3
Msa0714450 AT3G18130.1 25.100 251 166 8 320 559 30 269 3.90e-15 77.4
Msa0714450 AT2G22040.1 23.913 322 195 9 261 564 12 301 2.15e-16 80.9
Msa0714450 AT4G32551.1 25.090 279 147 10 298 571 647 868 2.78e-16 83.2
Msa0714450 AT4G32551.2 25.090 279 147 10 298 571 685 906 3.10e-16 83.2
Msa0714450 AT5G58230.1 25.806 248 145 11 334 552 167 404 4.54e-16 81.3
Msa0714450 AT3G18140.1 23.765 324 205 9 261 571 7 301 5.23e-16 79.7
Msa0714450 AT4G34460.3 22.963 270 180 10 342 591 60 321 6.73e-16 80.1
Msa0714450 AT4G34460.3 23.549 293 180 9 243 515 61 329 5.22e-12 68.2
Msa0714450 AT3G44530.2 23.143 350 203 9 309 593 16 364 8.77e-16 81.6
Msa0714450 AT3G44530.1 23.143 350 203 9 309 593 16 364 1.09e-15 81.3
Msa0714450 AT4G29830.1 23.370 368 212 12 241 593 8 320 1.23e-15 79.0
Msa0714450 AT1G18080.1 28.163 245 159 8 339 573 7 244 1.30e-15 79.0
Msa0714450 AT1G18080.1 26.070 257 157 9 320 559 30 270 1.91e-14 75.1
Msa0714450 AT4G15900.1 20.779 308 182 5 333 588 162 459 1.99e-15 79.7
Msa0714450 AT5G26900.1 24.306 288 169 8 312 552 132 417 2.08e-15 79.3
Msa0714450 AT3G16650.1 24.670 227 157 5 333 557 156 370 2.96e-15 79.0
Msa0714450 AT4G33260.1 23.390 295 163 9 312 552 136 421 3.66e-15 78.6
Msa0714450 AT4G33270.1 23.390 295 163 9 312 552 146 431 4.04e-15 78.6
Msa0714450 AT5G16750.1 23.887 247 162 7 319 550 417 652 4.38e-15 79.3
Msa0714450 AT5G16750.1 22.993 274 152 6 237 508 436 652 8.71e-12 68.9
Msa0714450 AT1G73720.1 27.309 249 146 8 354 585 220 450 5.36e-15 78.6
Msa0714450 AT1G73720.1 27.711 166 118 2 428 592 211 375 6.27e-13 72.0
Msa0714450 AT1G73720.1 22.884 319 221 7 241 550 207 509 1.63e-11 67.4
Msa0714450 AT5G64630.2 23.387 372 209 12 250 557 16 375 6.47e-15 78.2
Msa0714450 AT5G27945.1 23.569 297 140 7 301 552 147 401 6.99e-15 77.4
Msa0714450 AT5G13840.1 23.856 306 182 9 309 570 177 475 7.69e-15 77.8
Msa0714450 AT5G13840.2 23.856 306 182 9 309 570 177 475 7.69e-15 77.8
Msa0714450 AT4G35050.1 27.442 215 109 7 343 553 165 336 1.20e-14 77.0
Msa0714450 AT5G27570.1 24.436 266 177 10 301 552 168 423 1.53e-14 76.6
Msa0714450 AT3G21540.1 27.197 239 150 6 319 554 77 294 1.61e-14 77.8
Msa0714450 AT3G21540.1 25.857 321 194 9 244 550 403 693 5.77e-12 69.3
Msa0714450 AT1G15440.1 22.977 309 166 7 308 593 391 650 1.84e-14 77.4
Msa0714450 AT1G15440.2 22.977 309 166 7 308 593 351 610 1.86e-14 77.4
Msa0714450 AT1G49040.1 23.651 241 168 3 320 557 869 1096 2.12e-14 77.4
Msa0714450 AT5G64630.1 23.562 365 203 12 257 557 23 375 3.24e-14 75.5
Msa0714450 AT2G05720.1 30.303 132 78 3 438 564 134 256 3.97e-14 73.6
Msa0714450 AT4G22910.1 25.200 250 171 9 309 552 220 459 6.17e-14 75.1
Msa0714450 AT5G64730.1 23.318 223 159 3 343 564 14 225 6.74e-14 73.2
Msa0714450 AT5G08560.1 25.449 334 203 10 234 553 261 562 6.75e-14 75.1
Msa0714450 AT5G08560.2 25.449 334 203 10 234 553 261 562 6.75e-14 75.1
Msa0714450 AT5G08560.3 25.449 334 203 10 234 553 261 562 6.75e-14 75.1
Msa0714450 AT4G33260.2 23.368 291 160 9 312 548 136 417 7.00e-14 74.7
Msa0714450 AT2G32950.1 22.121 330 217 12 290 591 354 671 1.20e-13 74.7
Msa0714450 AT1G18830.1 28.755 233 139 10 295 511 105 326 1.40e-13 74.7
Msa0714450 AT1G18830.2 28.755 233 139 10 295 511 105 326 1.48e-13 74.7
Msa0714450 AT1G18830.3 28.755 233 139 10 295 511 105 326 1.48e-13 74.7
Msa0714450 AT2G32950.2 23.864 264 170 10 347 591 307 558 1.50e-13 73.9
Msa0714450 AT1G29260.1 27.473 182 117 7 420 595 96 268 1.79e-13 72.0
Msa0714450 AT1G10580.1 23.750 400 259 13 139 522 174 543 2.15e-13 73.6
Msa0714450 AT1G52360.3 23.166 259 180 6 338 588 6 253 3.42e-13 73.2
Msa0714450 AT1G52360.3 21.141 298 223 5 298 590 7 297 2.11e-12 70.9
Msa0714450 AT1G52360.4 23.166 259 180 6 338 588 6 253 3.58e-13 73.2
Msa0714450 AT1G52360.4 21.141 298 223 5 298 590 7 297 2.21e-12 70.9
Msa0714450 AT1G52360.1 23.166 259 180 6 338 588 6 253 3.58e-13 73.2
Msa0714450 AT1G52360.1 21.141 298 223 5 298 590 7 297 2.21e-12 70.9
Msa0714450 AT1G52360.2 23.166 259 180 6 338 588 50 297 3.75e-13 73.2
Msa0714450 AT1G52360.2 21.141 298 223 5 298 590 51 341 2.14e-12 70.9
Msa0714450 AT1G79990.1 24.723 271 184 6 290 549 36 297 3.76e-13 73.2
Msa0714450 AT1G79990.1 22.222 234 164 5 338 564 6 228 4.91e-12 69.7
Msa0714450 AT2G46290.1 25.843 267 142 9 307 562 38 259 3.81e-13 71.6
Msa0714450 AT1G79990.2 24.723 271 184 6 290 549 36 297 4.19e-13 73.2
Msa0714450 AT1G79990.2 22.222 234 164 5 338 564 6 228 4.81e-12 69.7
Msa0714450 AT3G15980.1 21.477 298 222 5 298 590 7 297 4.93e-13 72.8
Msa0714450 AT3G15980.3 21.477 298 222 5 298 590 7 297 5.26e-13 72.8
Msa0714450 AT3G15980.6 21.477 298 222 5 298 590 7 297 5.26e-13 72.8
Msa0714450 AT3G15980.2 21.477 298 222 5 298 590 7 297 5.26e-13 72.8
Msa0714450 AT3G15980.4 21.477 298 222 5 298 590 7 297 5.26e-13 72.8
Msa0714450 AT3G15980.7 21.477 298 222 5 298 590 7 297 5.38e-13 72.8
Msa0714450 AT3G15980.5 21.477 298 222 5 298 590 7 297 7.34e-13 72.4
Msa0714450 AT3G01340.1 25.362 276 140 11 341 590 50 285 7.43e-13 70.1
Msa0714450 AT3G01340.2 25.362 276 140 11 341 590 50 285 7.43e-13 70.1
Msa0714450 AT2G16780.1 26.047 215 112 7 343 553 164 335 2.22e-12 69.7
Msa0714450 AT5G49430.2 24.672 381 185 16 245 562 285 626 2.94e-12 70.5
Msa0714450 AT5G49430.1 24.672 381 185 16 245 562 285 626 2.94e-12 70.5
Msa0714450 AT2G21390.1 24.696 247 159 7 309 552 96 318 3.59e-12 70.1
Msa0714450 AT4G11920.1 22.500 240 149 3 350 552 212 451 9.65e-12 68.2
Msa0714450 AT5G43920.1 24.522 314 187 11 234 508 211 513 1.13e-11 67.8
Msa0714450 AT2G47410.4 24.427 262 153 8 343 568 50 302 1.31e-11 68.6
Msa0714450 AT2G47410.2 24.427 262 153 8 343 568 231 483 1.62e-11 68.2
Msa0714450 AT2G47410.1 24.427 262 153 8 343 568 232 484 1.72e-11 68.2
Msa0714450 AT2G46280.3 25.000 256 138 8 307 552 11 222 1.74e-11 65.5
Msa0714450 AT3G18860.2 25.614 285 180 11 321 594 34 297 2.16e-11 67.4
Msa0714450 AT3G18860.1 25.614 285 180 11 321 594 34 297 2.27e-11 67.4
Msa0714450 AT1G62020.1 21.543 311 198 9 246 552 50 318 2.35e-11 67.4
Msa0714450 AT3G42660.1 25.573 262 155 9 241 486 56 293 3.09e-11 67.0
Msa0714450 AT1G48870.2 24.775 222 135 8 343 558 194 389 3.46e-11 66.6
Msa0714450 AT1G48870.3 24.775 222 135 8 343 558 194 389 3.46e-11 66.6
Msa0714450 AT1G48870.1 24.775 222 135 8 343 558 194 389 3.46e-11 66.6
Msa0714450 AT1G27840.1 26.852 216 124 8 340 552 36 220 3.61e-11 66.2
Msa0714450 AT2G46280.2 25.000 256 138 8 307 552 11 222 3.67e-11 65.5
Msa0714450 AT2G46280.1 25.000 256 138 8 307 552 11 222 3.67e-11 65.5
Msa0714450 AT1G27840.3 26.852 216 124 8 340 552 36 220 3.68e-11 66.2
Msa0714450 AT1G19750.1 26.389 216 125 8 340 552 36 220 4.91e-11 65.9
Msa0714450 AT2G47410.6 23.574 263 164 6 343 568 50 312 6.59e-11 66.2
Msa0714450 AT2G47410.3 23.574 263 164 6 343 568 50 312 6.59e-11 66.2
Msa0714450 AT2G33340.2 23.047 256 146 7 309 561 225 432 6.82e-11 65.5
Msa0714450 AT2G33340.1 23.047 256 146 7 309 561 225 432 6.82e-11 65.5
Msa0714450 AT2G33340.3 23.047 256 146 7 309 561 225 432 9.32e-11 65.1

Find 157 sgRNAs with CRISPR-Local

Find 590 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAACTCCGTTGTAAGTTTA+TGG 0.077339 5_1:-7092453 Msa0714450:three_prime_UTR
ATTCAAGGACCATATATTTA+TGG 0.160905 5_1:+7092749 None:intergenic
GCCAACACCAATTTCTTATT+AGG 0.182828 5_1:+7094396 None:intergenic
ATTCCACTTCAGAGAAAATA+TGG 0.199133 5_1:+7095679 None:intergenic
GGGATTCAACAGCTCGTATT+TGG 0.216439 5_1:-7096580 Msa0714450:CDS
ATGATGGTCAAGCACGAATT+TGG 0.225147 5_1:-7095950 Msa0714450:CDS
ATATTGACAGAACTGTATTT+TGG 0.226598 5_1:-7092534 Msa0714450:three_prime_UTR
TAAGTCAGATGTAACAATTT+TGG 0.234102 5_1:-7097905 Msa0714450:CDS
ATGCCCCATTGATGGAAATT+TGG 0.235574 5_1:-7099328 Msa0714450:CDS
AAAGGAGATTATCTTCTTAC+TGG 0.244089 5_1:-7095653 Msa0714450:CDS
ATGATACATGTTTGCAAGAT+TGG 0.283530 5_1:-7095262 Msa0714450:CDS
TTCCGCATCCCATAGCTTTA+CGG 0.289923 5_1:+7093133 None:intergenic
CCAACACCAATTTCTTATTA+GGG 0.296590 5_1:+7094397 None:intergenic
AAATAACCCTAATAAGAAAT+TGG 0.302756 5_1:-7094403 Msa0714450:CDS
ACAGGATCCTTTCTTGCATC+AGG 0.306668 5_1:-7097754 Msa0714450:CDS
TAACAATACAGTTTGCGTTT+TGG 0.312131 5_1:-7092634 Msa0714450:CDS
CTTGAGGAGGATGGAGCATT+TGG 0.317776 5_1:-7098691 Msa0714450:CDS
TCAGAAGGGACTACAGTTCT+TGG 0.325341 5_1:-7099277 Msa0714450:CDS
GATCAAGAAGATAAGGTTAA+TGG 0.329734 5_1:-7098829 Msa0714450:CDS
TTTCGCTACCTTCAAGAATC+AGG 0.329929 5_1:-7100976 Msa0714450:intron
TTCGTTGAAGAGAACGGGTT+TGG 0.342700 5_1:+7101039 None:intergenic
TGTTGGTGTTGCAGCACATC+AGG 0.356475 5_1:-7096505 Msa0714450:CDS
GTGAAGTTAATTGTATCAAA+TGG 0.359842 5_1:-7094797 Msa0714450:CDS
GTTCAACACTCGACGTTGAT+TGG 0.363966 5_1:-7095324 Msa0714450:CDS
CATAATCATTAGTAACTAGT+AGG 0.373232 5_1:-7092430 Msa0714450:three_prime_UTR
GGATCCCACAGGTTCATTAC+TGG 0.376344 5_1:-7094775 Msa0714450:CDS
CCATGTTCGTTGAAGAGAAC+GGG 0.378036 5_1:+7101034 None:intergenic
TCTTCGTCCGGGAATTATAT+AGG 0.385597 5_1:-7101199 Msa0714450:five_prime_UTR
AATGATCTTGCCATCATTCA+AGG 0.388091 5_1:+7092734 None:intergenic
CACAGTCGAAGGGTCGTTCT+TGG 0.388341 5_1:+7096526 None:intergenic
ATGACAAATCCATAAATATA+TGG 0.390659 5_1:-7092758 Msa0714450:CDS
GAACATACCTTGGAGCTATC+TGG 0.400897 5_1:+7092325 None:intergenic
TCGATGGGTCTGCAATTGTA+TGG 0.402215 5_1:-7095625 Msa0714450:CDS
GGCCCTTGAACCTCTTCGTC+CGG 0.408722 5_1:-7101211 Msa0714450:five_prime_UTR
ATGAAATACCTGATTCTTGA+AGG 0.410485 5_1:+7100968 None:intergenic
AAAATTGTTACATCTGACTT+AGG 0.415024 5_1:+7097907 None:intergenic
CTGGCTAAATACTCACCATT+GGG 0.418567 5_1:+7092789 None:intergenic
CTTCTTACTGGAAGTTTCGA+TGG 0.421511 5_1:-7095641 Msa0714450:CDS
AAGCTATGGGATGCGGAACT+CGG 0.422502 5_1:-7093128 Msa0714450:CDS
GGTACCAAATTTCCATCAAT+GGG 0.429149 5_1:+7099324 None:intergenic
GGCAAGTCCTATATAATTCC+CGG 0.437188 5_1:+7101192 None:intergenic
GTACATATGTCCATGGGCTC+TGG 0.439846 5_1:+7097958 None:intergenic
CTTGCAACCGGTTCTTATGA+TGG 0.442121 5_1:-7095966 Msa0714450:CDS
TGAGAAGAGCCACCTTACTT+TGG 0.449886 5_1:-7092592 Msa0714450:three_prime_UTR
GCTATCAGATGGAGCCCAAC+TGG 0.449961 5_1:-7094435 Msa0714450:CDS
GCACGAATTTGGACCGCTAA+TGG 0.450598 5_1:-7095939 Msa0714450:intron
TGGTACCAAATTTCCATCAA+TGG 0.450794 5_1:+7099323 None:intergenic
TGCTTGACCATCATAAGAAC+CGG 0.451683 5_1:+7095959 None:intergenic
TTATTAGGGTTATTTGTAGC+AGG 0.457403 5_1:+7094411 None:intergenic
AAAGTAAGGTGGCTCTTCTC+AGG 0.459176 5_1:+7092594 None:intergenic
AAGATGTCACTACACTTGAT+TGG 0.465443 5_1:-7096460 Msa0714450:CDS
ATTAACAAATGCCCCATTGA+TGG 0.468955 5_1:-7099336 Msa0714450:CDS
AAGGGAGAAAGAACGTGAAA+AGG 0.469916 5_1:-7098926 Msa0714450:CDS
AAATCAGATCAGTAGAGAAA+TGG 0.476182 5_1:-7098857 Msa0714450:CDS
CCCGTTCTCTTCAACGAACA+TGG 0.479166 5_1:-7101034 Msa0714450:exon
AACATGTATCATGGTGTCAT+TGG 0.480498 5_1:+7095273 None:intergenic
ATTAAAACATACAACGGTAA+TGG 0.483414 5_1:-7092714 Msa0714450:CDS
TGAAGTTAATTGTATCAAAT+GGG 0.484187 5_1:-7094796 Msa0714450:CDS
GGATTTGTCATGGGACCCAC+TGG 0.485949 5_1:+7092770 None:intergenic
CTTAGGTCTGTGCTTGTGCA+TGG 0.489170 5_1:-7097783 Msa0714450:intron
TTAGTTAATGACGGTTGTAA+AGG 0.490788 5_1:-7101232 Msa0714450:five_prime_UTR
AAACTAATTCATAGCTTGAA+TGG 0.491309 5_1:-7093104 Msa0714450:CDS
ATACAGTTCTGTCAATATCA+TGG 0.492139 5_1:+7092539 None:intergenic
TATATTTATGGATTTGTCAT+GGG 0.493957 5_1:+7092761 None:intergenic
TTCTTACTGGAAGTTTCGAT+GGG 0.494004 5_1:-7095640 Msa0714450:CDS
TCTCTGAAGTGGAATAAGAA+AGG 0.497421 5_1:-7095671 Msa0714450:CDS
AATATATGGTCCTTGAATGA+TGG 0.499260 5_1:-7092744 Msa0714450:CDS
TTGAGCAACTAGCCAAAGTA+AGG 0.500908 5_1:+7092580 None:intergenic
TTGACTCTACCGTAAAGCTA+TGG 0.503121 5_1:-7093142 Msa0714450:CDS
TACCGACCCTGATGCAAGAA+AGG 0.504381 5_1:+7097747 None:intergenic
TTCCACTTCAGAGAAAATAT+GGG 0.504853 5_1:+7095680 None:intergenic
GTTGAGTTCGACGGAGGTGA+TGG 0.504919 5_1:+7101008 None:intergenic
ACTGGCTAAATACTCACCAT+TGG 0.504998 5_1:+7092788 None:intergenic
GCTTGTGCATGGAGTCCTAC+AGG 0.508560 5_1:-7097772 Msa0714450:CDS
TATTTGTAGCAGGACCAGTT+GGG 0.508917 5_1:+7094421 None:intergenic
GGTCTCAGATCAAGAAGATA+AGG 0.514110 5_1:-7098836 Msa0714450:CDS
CCCTAATAAGAAATTGGTGT+TGG 0.516897 5_1:-7094397 Msa0714450:CDS
GAGGAGGATGGAGCATTTGG+AGG 0.517057 5_1:-7098688 Msa0714450:intron
GCCCTTGAACCTCTTCGTCC+GGG 0.521145 5_1:-7101210 Msa0714450:five_prime_UTR
ATATATTTATGGATTTGTCA+TGG 0.524784 5_1:+7092760 None:intergenic
TCTTGTTACATTTGTTCAGA+AGG 0.525010 5_1:-7099292 Msa0714450:CDS
GAGGGGACACTACTTGCAAC+CGG 0.525092 5_1:-7095978 Msa0714450:CDS
ATAAGAAATTGGTGTTGGCT+AGG 0.535443 5_1:-7094392 Msa0714450:intron
AATCTTGCAAACATGTATCA+TGG 0.536038 5_1:+7095264 None:intergenic
AGCTATGGGATGCGGAACTC+GGG 0.538087 5_1:-7093127 Msa0714450:CDS
CTTGTTACATTTGTTCAGAA+GGG 0.539198 5_1:-7099291 Msa0714450:CDS
CGATGGGTCTGCAATTGTAT+GGG 0.539354 5_1:-7095624 Msa0714450:CDS
TTGTATAGGTCCAGAGCCCA+TGG 0.540242 5_1:-7097968 Msa0714450:intron
GCTAGTAGTTTAGTTAATGA+CGG 0.540262 5_1:-7101241 None:intergenic
GGGACTACAGTTCTTGGAGA+TGG 0.540425 5_1:-7099271 Msa0714450:CDS
TTCCCGGACGAAGAGGTTCA+AGG 0.540852 5_1:+7101208 None:intergenic
TAAGGTTAATGTAAAGCTTG+AGG 0.542812 5_1:-7098707 Msa0714450:CDS
TGGAAATTTGGTACCACCTG+GGG 0.546474 5_1:-7099316 Msa0714450:CDS
AATGTAAAGCTTGAGGAGGA+TGG 0.549555 5_1:-7098700 Msa0714450:CDS
GATGGAAATTTGGTACCACC+TGG 0.553414 5_1:-7099318 Msa0714450:CDS
AAGAAAGGGCCTACCATTAG+CGG 0.554282 5_1:+7095926 None:intergenic
AAGAAGAAGAAAGCGACAGA+GGG 0.556500 5_1:-7099019 Msa0714450:CDS
TGATGTTGTACATATGTCCA+TGG 0.557105 5_1:+7097951 None:intergenic
CAGGATCCTTTCTTGCATCA+GGG 0.558005 5_1:-7097753 Msa0714450:intron
ACGTGAAAAGGATAAAGAGA+AGG 0.558461 5_1:-7098914 Msa0714450:CDS
TGACTCTACCGTAAAGCTAT+GGG 0.561117 5_1:-7093141 Msa0714450:CDS
TTATTTGTAGCAGGACCAGT+TGG 0.561581 5_1:+7094420 None:intergenic
AGGTGTATAAACCTGGTGCC+CGG 0.562381 5_1:+7095213 None:intergenic
AGGAGATATATGCTATCAGA+TGG 0.562544 5_1:-7094446 Msa0714450:CDS
ATAATCATTAGTAACTAGTA+GGG 0.569724 5_1:-7092429 Msa0714450:three_prime_UTR
TACCGTAAAGCTATGGGATG+CGG 0.571449 5_1:-7093135 Msa0714450:CDS
GTTGGTGTTGCAGCACATCA+GGG 0.572151 5_1:-7096504 Msa0714450:CDS
TGCAACACCAACACAGTCGA+AGG 0.580347 5_1:+7096515 None:intergenic
TTACAACGGAGTTACAAGAA+TGG 0.580824 5_1:+7092461 None:intergenic
GAGGTCTGTTGGAACAAGGA+GGG 0.582876 5_1:-7092681 Msa0714450:CDS
ACTATTGCATTCAGCCCCAA+TGG 0.585345 5_1:-7092804 Msa0714450:CDS
GCCATGTTCGTTGAAGAGAA+CGG 0.586331 5_1:+7101033 None:intergenic
CGTATTTGGACAATAGCTGA+AGG 0.595247 5_1:-7096566 Msa0714450:CDS
ATGGAAATTTGGTACCACCT+GGG 0.597709 5_1:-7099317 Msa0714450:CDS
TACCCAATGAGAACATACCT+TGG 0.597919 5_1:+7092315 None:intergenic
TGTCAACGCGGCAGAAGACA+CGG 0.599161 5_1:+7101148 None:intergenic
TCCCGGACGAAGAGGTTCAA+GGG 0.601305 5_1:+7101209 None:intergenic
AAAGAAGAAGAAAGCGACAG+AGG 0.607997 5_1:-7099020 Msa0714450:CDS
TTTGTGTTTGGGAATGAGGG+TGG 0.611504 5_1:-7099360 Msa0714450:CDS
CGAGGCCAGTAATGAACCTG+TGG 0.613287 5_1:+7094770 None:intergenic
ACAAATGTAACAAGAGCCCC+AGG 0.621406 5_1:+7099300 None:intergenic
TATATAATTCCCGGACGAAG+AGG 0.622646 5_1:+7101201 None:intergenic
GAACGACCCTTCGACTGTGT+TGG 0.624305 5_1:-7096522 Msa0714450:CDS
TTCAGATGATAACACTGCAA+AGG 0.624464 5_1:-7094745 Msa0714450:intron
TGTATCAAATGGGATCCCAC+AGG 0.627567 5_1:-7094786 Msa0714450:CDS
GATGTTGTACATATGTCCAT+GGG 0.631848 5_1:+7097952 None:intergenic
AATGGTGAGTATTTAGCCAG+TGG 0.632034 5_1:-7092786 Msa0714450:CDS
AAAACATACAACGGTAATGG+AGG 0.632250 5_1:-7092711 Msa0714450:CDS
CATGATAACGATTATACAGA+CGG 0.632999 5_1:+7092367 None:intergenic
ATGGTGAGTATTTAGCCAGT+GGG 0.634149 5_1:-7092785 Msa0714450:CDS
TGAGGTCTGTTGGAACAAGG+AGG 0.635956 5_1:-7092682 Msa0714450:CDS
AGCAACTAGCCAAAGTAAGG+TGG 0.639749 5_1:+7092583 None:intergenic
GGTTAATGTAAAGCTTGAGG+AGG 0.643371 5_1:-7098704 Msa0714450:CDS
GAGTACATTAAGCAAACACA+AGG 0.647125 5_1:-7095705 Msa0714450:CDS
TTGGTGTTGCAGCACATCAG+GGG 0.650194 5_1:-7096503 Msa0714450:CDS
GATGCAAGAAAGGATCCTGT+AGG 0.654010 5_1:+7097757 None:intergenic
AAGATCATTAAAACATACAA+CGG 0.654641 5_1:-7092720 Msa0714450:CDS
AACGAGATAGTTGAGTTCGA+CGG 0.655202 5_1:+7100999 None:intergenic
AACGCGGCAGAAGACACGGT+GGG 0.660469 5_1:+7101152 None:intergenic
TTTGGAAGGGCATAAGTCGG+AGG 0.660869 5_1:-7097887 Msa0714450:intron
ATTATGCCATAAACTTACAA+CGG 0.661222 5_1:+7092447 None:intergenic
TTCATAGCTTGAATGGACAC+AGG 0.666219 5_1:-7093097 Msa0714450:intron
GAGATAGTTGAGTTCGACGG+AGG 0.668490 5_1:+7101002 None:intergenic
GCAACACCAACACAGTCGAA+GGG 0.676096 5_1:+7096516 None:intergenic
GTATTTGGACAATAGCTGAA+GGG 0.676310 5_1:-7096565 Msa0714450:CDS
AGAAGAAGAAAGCGACAGAG+GGG 0.682574 5_1:-7099018 Msa0714450:CDS
TCTGCTGCCAGATAGCTCCA+AGG 0.682890 5_1:-7092332 Msa0714450:three_prime_UTR
AAAGAGCATGATGGTGACCG+TGG 0.692244 5_1:-7098976 Msa0714450:CDS
GAGGCCAGTAATGAACCTGT+GGG 0.694911 5_1:+7094771 None:intergenic
AGTGTTATCATCTGAACACG+AGG 0.704222 5_1:+7094752 None:intergenic
TGGCTAAATACTCACCATTG+GGG 0.715065 5_1:+7092790 None:intergenic
GTGTGCTGTGTGTGTCAACG+CGG 0.735841 5_1:+7101136 None:intergenic
TCTGACTTAGGAAATTCACA+TGG 0.743110 5_1:+7097919 None:intergenic
GTACCAAATTTCCATCAATG+GGG 0.758288 5_1:+7099325 None:intergenic
AGTACATTAAGCAAACACAA+GGG 0.758457 5_1:-7095704 Msa0714450:CDS
CAACGCGGCAGAAGACACGG+TGG 0.770293 5_1:+7101151 None:intergenic
AATGTAACAAGAGCCCCAGG+TGG 0.785541 5_1:+7099303 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCAAATATAAATTCATTTTA+AGG - chr5_1:7096353-7096372 Msa0714450:intron 10.0%
!! AAAAACTAAATAAATTTGAA+AGG - chr5_1:7096389-7096408 Msa0714450:intron 10.0%
!!! AAAAAAAACATTAAAAGTTT+TGG + chr5_1:7097450-7097469 None:intergenic 10.0%
!!! GTTTTTTTTTTTAAATTTAG+GGG - chr5_1:7097461-7097480 Msa0714450:intron 10.0%
!! TAGAAATTTATGATAAAATT+AGG + chr5_1:7100208-7100227 None:intergenic 10.0%
!! GAGAGAATATTAAAAATATT+AGG - chr5_1:7093549-7093568 Msa0714450:intron 15.0%
!!! CAAACAATAATAAATTGTTT+TGG - chr5_1:7093581-7093600 Msa0714450:intron 15.0%
!!! AAAAACAAAAAAAGATGTTT+TGG - chr5_1:7093623-7093642 Msa0714450:intron 15.0%
!!! AAAACAAAAAAAGATGTTTT+GGG - chr5_1:7093624-7093643 Msa0714450:intron 15.0%
!! TATTATTAATCTTATACCTT+TGG - chr5_1:7093758-7093777 Msa0714450:intron 15.0%
!! AAACAAATATTTCAAAAGTA+TGG + chr5_1:7095226-7095245 None:intergenic 15.0%
!!! AAAAGTGTGATTTTATTTAT+AGG - chr5_1:7096137-7096156 Msa0714450:intron 15.0%
!!! AAAGTGTGATTTTATTTATA+GGG - chr5_1:7096138-7096157 Msa0714450:intron 15.0%
!!! ATAAATTTGAAAGGTATTTT+AGG - chr5_1:7096398-7096417 Msa0714450:intron 15.0%
!! TGAAAGAAATAAAAGATAAT+AGG - chr5_1:7096713-7096732 Msa0714450:intron 15.0%
!! AAAAGATAATAGGATATAAA+AGG - chr5_1:7096723-7096742 Msa0714450:intron 15.0%
!! TTTACTACTAATAAAATGTA+AGG + chr5_1:7096749-7096768 None:intergenic 15.0%
!!! AAAAAACTGATTTTTAAAGT+AGG - chr5_1:7097420-7097439 Msa0714450:intron 15.0%
!!! AAAAACTGATTTTTAAAGTA+GGG - chr5_1:7097421-7097440 Msa0714450:intron 15.0%
!! ACTAAGATTTATCAAAATAA+AGG + chr5_1:7097682-7097701 None:intergenic 15.0%
!!! ATATTGTTAATTTTTTAAGC+TGG - chr5_1:7097739-7097758 Msa0714450:intron 15.0%
!!! TATTGTTAATTTTTTAAGCT+GGG - chr5_1:7097740-7097759 Msa0714450:intron 15.0%
!! ATAATAATTCAAAACAAGTT+AGG + chr5_1:7098368-7098387 None:intergenic 15.0%
!! TCTATAAAATAATTTCTTGA+TGG + chr5_1:7098874-7098893 None:intergenic 15.0%
!!! AGTTAATTTCACAAATATTT+TGG + chr5_1:7098926-7098945 None:intergenic 15.0%
!!! ATAAGTATATTCATGATTTT+AGG - chr5_1:7099004-7099023 Msa0714450:CDS 15.0%
!!! TAAGTATATTCATGATTTTA+GGG - chr5_1:7099005-7099024 Msa0714450:CDS 15.0%
!! ATATTGTATTTATAGTTGTT+GGG + chr5_1:7099643-7099662 None:intergenic 15.0%
!!! AAAGTTGTTTAATTTGATTA+TGG - chr5_1:7099776-7099795 Msa0714450:intron 15.0%
!!! TTTGGAGATTTTTTCTTTTT+TGG + chr5_1:7092504-7092523 None:intergenic 20.0%
!!! TTTTTTACATTTTCTTCGTT+AGG - chr5_1:7092634-7092653 Msa0714450:CDS 20.0%
!! ATGAAATCAATTAACAAACT+CGG + chr5_1:7092990-7093009 None:intergenic 20.0%
!!! AGTTTGTTAATTGATTTCAT+TGG - chr5_1:7092990-7093009 Msa0714450:intron 20.0%
!!! ATAATAAATTGTTTTGGCAA+AGG - chr5_1:7093587-7093606 Msa0714450:intron 20.0%
!!! AAATATTTCAAAAGTATGGT+TGG + chr5_1:7095222-7095241 None:intergenic 20.0%
!!! AAGTTTTCATTCAATTGTAT+AGG - chr5_1:7095576-7095595 Msa0714450:intron 20.0%
!! CAAAACTGTGAATATTTATA+GGG + chr5_1:7095953-7095972 None:intergenic 20.0%
!! ACAAAACTGTGAATATTTAT+AGG + chr5_1:7095954-7095973 None:intergenic 20.0%
!!! AAAAATTTCCATCAACATTT+TGG + chr5_1:7096045-7096064 None:intergenic 20.0%
!! ACAAAATTCTGAATATTTAC+AGG - chr5_1:7096168-7096187 Msa0714450:intron 20.0%
!! CAAAATTCTGAATATTTACA+GGG - chr5_1:7096169-7096188 Msa0714450:intron 20.0%
!! ATATGAATAAAAGAGGTTAT+TGG - chr5_1:7096326-7096345 Msa0714450:intron 20.0%
!! TAGGAACACTATTATTAAAT+AGG - chr5_1:7096417-7096436 Msa0714450:intron 20.0%
!!! TTTATGTCGTTTAAAACTAA+TGG - chr5_1:7096518-7096537 Msa0714450:CDS 20.0%
!! AAAAGCAATCAATTCAAAAA+GGG + chr5_1:7096577-7096596 None:intergenic 20.0%
!! AAAAAGCAATCAATTCAAAA+AGG + chr5_1:7096578-7096597 None:intergenic 20.0%
!! AAAAATAGACAAAAGTTGTT+AGG + chr5_1:7096636-7096655 None:intergenic 20.0%
!!! CTTTTGTCTATTTTTTTATC+AGG - chr5_1:7096641-7096660 Msa0714450:intron 20.0%
!!! TTCAATAGTTTTTAATGACA+CGG + chr5_1:7096697-7096716 None:intergenic 20.0%
!! AGTAAAATATATATGATGCT+TGG - chr5_1:7096763-7096782 Msa0714450:intron 20.0%
!! GAAATAGATAACAATAACAA+GGG + chr5_1:7096851-7096870 None:intergenic 20.0%
!! AGAAATAGATAACAATAACA+AGG + chr5_1:7096852-7096871 None:intergenic 20.0%
!!! AGGATAATTTTGTTCTTATT+AGG - chr5_1:7097280-7097299 Msa0714450:intron 20.0%
!!! GGATAATTTTGTTCTTATTA+GGG - chr5_1:7097281-7097300 Msa0714450:intron 20.0%
!!! TTTAAGTCTTAAATGCATTT+TGG + chr5_1:7097488-7097507 None:intergenic 20.0%
!!! AAACTCTAAAATAGATTGTA+TGG - chr5_1:7098046-7098065 Msa0714450:intron 20.0%
!!! AACTCTAAAATAGATTGTAT+GGG - chr5_1:7098047-7098066 Msa0714450:intron 20.0%
!! TTATTGTAATAAATGCAGTA+GGG + chr5_1:7098444-7098463 None:intergenic 20.0%
!! TTTATTGTAATAAATGCAGT+AGG + chr5_1:7098445-7098464 None:intergenic 20.0%
!!! TTAGCATTTATTACATGTTT+TGG - chr5_1:7098616-7098635 Msa0714450:intron 20.0%
!! TGAAGTTAATTGTATCAAAT+GGG - chr5_1:7098762-7098781 Msa0714450:CDS 20.0%
!!! TAAATAATGGTTTTTTTCGT+AGG - chr5_1:7099092-7099111 Msa0714450:CDS 20.0%
!! AAATAACCCTAATAAGAAAT+TGG - chr5_1:7099155-7099174 Msa0714450:intron 20.0%
!!! ACTCTAAAAATAGAATTTGT+GGG - chr5_1:7099503-7099522 Msa0714450:intron 20.0%
!! CATATTGTATTTATAGTTGT+TGG + chr5_1:7099644-7099663 None:intergenic 20.0%
!! ACTTTATATGAAAAACTACA+CGG + chr5_1:7099761-7099780 None:intergenic 20.0%
!! TGATAAAAACTAATACTTTG+AGG - chr5_1:7099926-7099945 Msa0714450:intron 20.0%
!!! ATAAGAATTTGAAGAGTTTT+AGG - chr5_1:7100239-7100258 Msa0714450:intron 20.0%
!! TTAAGTATGAAATGAATGTT+AGG + chr5_1:7100607-7100626 None:intergenic 20.0%
!! AACTTCTATTATAGTTTATC+TGG - chr5_1:7100634-7100653 Msa0714450:intron 20.0%
!! TATATTTATGGATTTGTCAT+GGG + chr5_1:7100800-7100819 None:intergenic 20.0%
!! ATATATTTATGGATTTGTCA+TGG + chr5_1:7100801-7100820 None:intergenic 20.0%
!! ATGACAAATCCATAAATATA+TGG - chr5_1:7100800-7100819 Msa0714450:intron 20.0%
!! AAGATCATTAAAACATACAA+CGG - chr5_1:7100838-7100857 Msa0714450:intron 20.0%
!! AAGAATGGTTAAAAACTTAA+AGG + chr5_1:7101085-7101104 None:intergenic 20.0%
!! ATAATCATTAGTAACTAGTA+GGG - chr5_1:7101129-7101148 Msa0714450:five_prime_UTR 20.0%
!!! TTTTTCTTTTTTGGTGTGAA+GGG + chr5_1:7092495-7092514 None:intergenic 25.0%
!!! TTTTTTCTTTTTTGGTGTGA+AGG + chr5_1:7092496-7092515 None:intergenic 25.0%
!! TGTTCGTTAATTGATTTCAT+TGG - chr5_1:7092935-7092954 Msa0714450:intron 25.0%
! ATGAAATCAATTAACGAACT+CGG + chr5_1:7093045-7093064 None:intergenic 25.0%
!! AGTTCGTTAATTGATTTCAT+TGG - chr5_1:7093045-7093064 Msa0714450:intron 25.0%
! ATATAAGGTCAATCTAAACT+CGG + chr5_1:7093100-7093119 None:intergenic 25.0%
! TTTCACAACTATGACATATA+AGG + chr5_1:7093115-7093134 None:intergenic 25.0%
!! GAAATTGAATCATCTTTTCT+TGG + chr5_1:7093296-7093315 None:intergenic 25.0%
!! CACATAATTCGTAATTCTTT+TGG + chr5_1:7093955-7093974 None:intergenic 25.0%
!!! ACAACATATAGTGTTTTTTG+TGG - chr5_1:7094011-7094030 Msa0714450:intron 25.0%
!!! TTTTTAAGCTTTTCATACCT+GGG - chr5_1:7094395-7094414 Msa0714450:CDS 25.0%
! AAAAAGAAAGACAAGGTTAA+TGG - chr5_1:7094771-7094790 Msa0714450:CDS 25.0%
! AAAGAAGATGCTAAAAAAGA+AGG - chr5_1:7094801-7094820 Msa0714450:CDS 25.0%
! AAAAAAGAAGGTAAGGTTAA+TGG - chr5_1:7094813-7094832 Msa0714450:intron 25.0%
! ATAAACTAAATCAGTTGAAC+TGG + chr5_1:7094902-7094921 None:intergenic 25.0%
! AAAATGAGAAAAACTAACAG+AGG + chr5_1:7095043-7095062 None:intergenic 25.0%
! TCTCGATAAAAAAAATACTC+AGG + chr5_1:7095406-7095425 None:intergenic 25.0%
!! ACTTTTCAATCATCTTTTGA+AGG + chr5_1:7095560-7095579 None:intergenic 25.0%
! AAAATTGTTACATCTGACTT+AGG + chr5_1:7095654-7095673 None:intergenic 25.0%
!! TAAGTCAGATGTAACAATTT+TGG - chr5_1:7095653-7095672 Msa0714450:CDS 25.0%
!!! AAACGTGTGTATTTTGTTAT+AGG - chr5_1:7095909-7095928 Msa0714450:intron 25.0%
!!! AACGTGTGTATTTTGTTATA+GGG - chr5_1:7095910-7095929 Msa0714450:intron 25.0%
!!! AAGTGTGATCTTATTTTGTA+AGG + chr5_1:7095984-7096003 None:intergenic 25.0%
!!! ATGTTGATGGAAATTTTTGA+CGG - chr5_1:7096047-7096066 Msa0714450:intron 25.0%
!! ATGCTCATGGAAAATTTTAT+AGG - chr5_1:7096109-7096128 Msa0714450:intron 25.0%
!! TGCTCATGGAAAATTTTATA+GGG - chr5_1:7096110-7096129 Msa0714450:intron 25.0%
! CTAAGGGTTAATTAAGTAAA+TGG + chr5_1:7096196-7096215 None:intergenic 25.0%
!! AACCTCTTTTATTCATATGA+CGG + chr5_1:7096324-7096343 None:intergenic 25.0%
! AAAGCAATCAATTCAAAAAG+GGG + chr5_1:7096576-7096595 None:intergenic 25.0%
! GAAAATAAGTAGACTAATAG+AGG - chr5_1:7096878-7096897 Msa0714450:intron 25.0%
!! TTGTTATCATCTGAACTTTT+AGG - chr5_1:7096951-7096970 Msa0714450:intron 25.0%
!! TAATTTTGTTCTTATTAGGG+AGG - chr5_1:7097284-7097303 Msa0714450:intron 25.0%
! TTTCCAGAGAAAAGTTAAAT+AGG - chr5_1:7097391-7097410 Msa0714450:intron 25.0%
! TTCCAGAGAAAAGTTAAATA+GGG - chr5_1:7097392-7097411 Msa0714450:intron 25.0%
!! TTTTGATAAATCTTAGTGTC+TGG - chr5_1:7097685-7097704 Msa0714450:intron 25.0%
! AAGTAGAAGATCATAAACAT+GGG + chr5_1:7098186-7098205 None:intergenic 25.0%
! AAAGTAGAAGATCATAAACA+TGG + chr5_1:7098187-7098206 None:intergenic 25.0%
!!! TTTTAATTTCGGCTTTGTTT+AGG - chr5_1:7098212-7098231 Msa0714450:intron 25.0%
! GCTGAGTTAACTATTAAAAT+TGG - chr5_1:7098474-7098493 Msa0714450:intron 25.0%
! GAGTTAACTATTAAAATTGG+TGG - chr5_1:7098477-7098496 Msa0714450:intron 25.0%
!! ATTCCACTAAACTAGTTTAT+TGG - chr5_1:7098647-7098666 Msa0714450:intron 25.0%
! GTGAAGTTAATTGTATCAAA+TGG - chr5_1:7098761-7098780 Msa0714450:CDS 25.0%
! TATCGAAAAACATGCTATTA+TGG + chr5_1:7098846-7098865 None:intergenic 25.0%
! TTTGGTAAAAAGACATTTAC+TGG + chr5_1:7098908-7098927 None:intergenic 25.0%
! AAACATGAATATTCCCTAAT+TGG + chr5_1:7099045-7099064 None:intergenic 25.0%
!!! TTCATGTTTTTGAACTATAC+AGG - chr5_1:7099056-7099075 Msa0714450:CDS 25.0%
! TTGTTGGGAAATCTAAATAA+TGG - chr5_1:7099079-7099098 Msa0714450:CDS 25.0%
! AATTAAAGTATAGTGCTCTA+AGG - chr5_1:7099334-7099353 Msa0714450:CDS 25.0%
! ATTAAAGTATAGTGCTCTAA+GGG - chr5_1:7099335-7099354 Msa0714450:CDS 25.0%
!! CACTCTAAAAATAGAATTTG+TGG - chr5_1:7099502-7099521 Msa0714450:intron 25.0%
! TTGACAGCTTAAAAACATTT+GGG + chr5_1:7099607-7099626 None:intergenic 25.0%
! ATTGACAGCTTAAAAACATT+TGG + chr5_1:7099608-7099627 None:intergenic 25.0%
!!! TTTAATTTGATTATGGTGAC+CGG - chr5_1:7099783-7099802 Msa0714450:intron 25.0%
!!! GCTTGTTGTCTTTTTAAATT+TGG - chr5_1:7099832-7099851 Msa0714450:intron 25.0%
!! AATTTTGTAGAATGTGATGA+GGG + chr5_1:7100134-7100153 None:intergenic 25.0%
! AATGACTAAATAGTGTCAAA+AGG + chr5_1:7100376-7100395 None:intergenic 25.0%
! AAACTAATTCATAGCTTGAA+TGG - chr5_1:7100454-7100473 Msa0714450:intron 25.0%
!! AGCTTTTTATGTTATATCAG+TGG - chr5_1:7100497-7100516 Msa0714450:intron 25.0%
! ATTCAAGGACCATATATTTA+TGG + chr5_1:7100812-7100831 None:intergenic 25.0%
! ATTAAAACATACAACGGTAA+TGG - chr5_1:7100844-7100863 Msa0714450:intron 25.0%
! AACTGTATTGTTAGAAAAAC+AGG + chr5_1:7100917-7100936 None:intergenic 25.0%
!! ATATTGACAGAACTGTATTT+TGG - chr5_1:7101024-7101043 Msa0714450:exon 25.0%
! ATTATGCCATAAACTTACAA+CGG + chr5_1:7101114-7101133 None:intergenic 25.0%
! CATAATCATTAGTAACTAGT+AGG - chr5_1:7101128-7101147 Msa0714450:five_prime_UTR 25.0%
ATGAAATACCTGATTCTTGA+AGG + chr5_1:7092593-7092612 None:intergenic 30.0%
TTTCAATTCATTCAAGCCAA+CGG - chr5_1:7092730-7092749 Msa0714450:CDS 30.0%
GCTGAAAAATTGATACGATT+TGG - chr5_1:7092794-7092813 Msa0714450:CDS 30.0%
! GATAGTGAAGATGCAATTTT+AGG - chr5_1:7093359-7093378 Msa0714450:intron 30.0%
TACTACTAAACTTCATCCAA+AGG + chr5_1:7093777-7093796 None:intergenic 30.0%
GTTCGTAGTGTTAATACTAT+CGG + chr5_1:7093850-7093869 None:intergenic 30.0%
AAAAGAATTTGGTACGTATG+GGG + chr5_1:7093895-7093914 None:intergenic 30.0%
GAAAAGAATTTGGTACGTAT+GGG + chr5_1:7093896-7093915 None:intergenic 30.0%
TGAAAAGAATTTGGTACGTA+TGG + chr5_1:7093897-7093916 None:intergenic 30.0%
! CGTACCAAATTCTTTTCATA+TGG - chr5_1:7093899-7093918 Msa0714450:intron 30.0%
TACGCCATATGAAAAGAATT+TGG + chr5_1:7093906-7093925 None:intergenic 30.0%
!! TAATCTTGCTGTTCTTGTTA+TGG - chr5_1:7094034-7094053 Msa0714450:intron 30.0%
!! AATCTTGCTGTTCTTGTTAT+GGG - chr5_1:7094035-7094054 Msa0714450:intron 30.0%
TGTTATGGCCTTCTTATAAA+GGG + chr5_1:7094107-7094126 None:intergenic 30.0%
ATGTTATGGCCTTCTTATAA+AGG + chr5_1:7094108-7094127 None:intergenic 30.0%
TCTTGTTACATTTGTTCAGA+AGG - chr5_1:7094266-7094285 Msa0714450:intron 30.0%
CTTGTTACATTTGTTCAGAA+GGG - chr5_1:7094267-7094286 Msa0714450:intron 30.0%
!! CTTTTTAAGCTTTTCATACC+TGG - chr5_1:7094394-7094413 Msa0714450:CDS 30.0%
! GGTTTCATGTTGATAAATGT+TGG - chr5_1:7094416-7094435 Msa0714450:CDS 30.0%
! TTTTTCGTTCTTACAACCTT+TGG - chr5_1:7094470-7094489 Msa0714450:intron 30.0%
! TCTTTTGTGATAAGATCCAA+AGG + chr5_1:7094489-7094508 None:intergenic 30.0%
AGAAAAAGAAAGACAGGAAA+GGG - chr5_1:7094614-7094633 Msa0714450:intron 30.0%
AAATCAGATCAGTAGAGAAA+TGG - chr5_1:7094701-7094720 Msa0714450:intron 30.0%
GATCAAGAAGATAAGGTTAA+TGG - chr5_1:7094729-7094748 Msa0714450:intron 30.0%
AGATGCTAAAAAGAAAGACA+AGG - chr5_1:7094764-7094783 Msa0714450:CDS 30.0%
AGATGCTAAAAAAGAAGGTA+AGG - chr5_1:7094806-7094825 Msa0714450:intron 30.0%
! TGGTGCTAAAAAAGAAGATA+AGG - chr5_1:7094833-7094852 Msa0714450:intron 30.0%
TAAGGTTAATGTAAAGCTTG+AGG - chr5_1:7094851-7094870 Msa0714450:intron 30.0%
ATGCAGCAATACAATATGAA+AGG + chr5_1:7094968-7094987 None:intergenic 30.0%
ATTGTATGACATCGATACTT+GGG + chr5_1:7095012-7095031 None:intergenic 30.0%
AATTGTATGACATCGATACT+TGG + chr5_1:7095013-7095032 None:intergenic 30.0%
! ATTTCAAAAGTATGGTTGGA+AGG + chr5_1:7095218-7095237 None:intergenic 30.0%
AATCTTAAATCTGACAGAAG+TGG + chr5_1:7095328-7095347 None:intergenic 30.0%
ACTCAGGATATTGAATAAGA+AGG + chr5_1:7095390-7095409 None:intergenic 30.0%
GTTGCAACTTACAAGTAAAT+TGG + chr5_1:7095446-7095465 None:intergenic 30.0%
! TCAGATGTAACAATTTTGGA+AGG - chr5_1:7095657-7095676 Msa0714450:CDS 30.0%
!! CAGATGTAACAATTTTGGAA+GGG - chr5_1:7095658-7095677 Msa0714450:CDS 30.0%
! AATCCTTCATGTTTGTGTTT+TGG - chr5_1:7095708-7095727 Msa0714450:CDS 30.0%
AAACCAAAACACAAACATGA+AGG + chr5_1:7095714-7095733 None:intergenic 30.0%
! ACATTTTCCTTGAGCATTTT+AGG - chr5_1:7096017-7096036 Msa0714450:intron 30.0%
! CATTTTCCTTGAGCATTTTA+GGG - chr5_1:7096018-7096037 Msa0714450:intron 30.0%
! GCTGACGGAAAAATTTTATA+AGG - chr5_1:7096079-7096098 Msa0714450:intron 30.0%
ATAAGGACTAAAAATGCTCA+TGG - chr5_1:7096096-7096115 Msa0714450:intron 30.0%
AAATGAGAATATTGCGCAAA+TGG + chr5_1:7096257-7096276 None:intergenic 30.0%
! ACCTCTTTTATTCATATGAC+GGG + chr5_1:7096323-7096342 None:intergenic 30.0%
TCGAATATAAGCAAGTTTAG+TGG + chr5_1:7096479-7096498 None:intergenic 30.0%
! AACTTGCTTATATTCGAAAC+TGG - chr5_1:7096482-7096501 Msa0714450:CDS 30.0%
! GACATCTTTATTCTTTTCAG+TGG + chr5_1:7097086-7097105 None:intergenic 30.0%
GAAAAATCAGAAAACTGAAC+AGG + chr5_1:7097185-7097204 None:intergenic 30.0%
GTGGGATAATGAAATGTATA+AGG - chr5_1:7097260-7097279 Msa0714450:intron 30.0%
!!! GTGTAGGTTTTGAAAATAGA+AGG - chr5_1:7097310-7097329 Msa0714450:intron 30.0%
TCCAGAGAAAAGTTAAATAG+GGG - chr5_1:7097393-7097412 Msa0714450:intron 30.0%
TCGTACTTACTTATCTCTTA+TGG - chr5_1:7097524-7097543 Msa0714450:intron 30.0%
!! ATAAAGGTATCACTCAAAGA+AGG + chr5_1:7097666-7097685 None:intergenic 30.0%
AGTACATTAAGCAAACACAA+GGG - chr5_1:7097854-7097873 Msa0714450:intron 30.0%
TTCCACTTCAGAGAAAATAT+GGG + chr5_1:7097881-7097900 None:intergenic 30.0%
ATTCCACTTCAGAGAAAATA+TGG + chr5_1:7097882-7097901 None:intergenic 30.0%
AAAGGAGATTATCTTCTTAC+TGG - chr5_1:7097905-7097924 Msa0714450:CDS 30.0%
!! CAACAATTTGATTTTCACAG+TGG - chr5_1:7098093-7098112 Msa0714450:intron 30.0%
AATCTTGCAAACATGTATCA+TGG + chr5_1:7098297-7098316 None:intergenic 30.0%
ATGATACATGTTTGCAAGAT+TGG - chr5_1:7098296-7098315 Msa0714450:intron 30.0%
TGAATTATTATTCTGTGCAC+TGG - chr5_1:7098377-7098396 Msa0714450:intron 30.0%
! TTAAAATTGGTGGATAACCT+TGG - chr5_1:7098487-7098506 Msa0714450:intron 30.0%
! TAAAATTGGTGGATAACCTT+GGG - chr5_1:7098488-7098507 Msa0714450:intron 30.0%
GTCAGATACATTAGAGATTT+GGG + chr5_1:7098534-7098553 None:intergenic 30.0%
AGTCAGATACATTAGAGATT+TGG + chr5_1:7098535-7098554 None:intergenic 30.0%
TCTAATGTATCTGACTACTT+GGG - chr5_1:7098539-7098558 Msa0714450:intron 30.0%
! GAACCAATAAACTAGTTTAG+TGG + chr5_1:7098653-7098672 None:intergenic 30.0%
! TGTTTCTCGTTTTGTAGATA+TGG - chr5_1:7098968-7098987 Msa0714450:CDS 30.0%
! TTTTGAACTATACAGGTTGT+TGG - chr5_1:7099063-7099082 Msa0714450:CDS 30.0%
TTTGAACTATACAGGTTGTT+GGG - chr5_1:7099064-7099083 Msa0714450:CDS 30.0%
TTATTAGGGTTATTTGTAGC+AGG + chr5_1:7099150-7099169 None:intergenic 30.0%
CCAACACCAATTTCTTATTA+GGG + chr5_1:7099164-7099183 None:intergenic 30.0%
AAATAGTTTCTCAAAGTGTG+CGG + chr5_1:7099462-7099481 None:intergenic 30.0%
AAAATAGAATTTGTGGGTGA+TGG - chr5_1:7099509-7099528 Msa0714450:intron 30.0%
AAATAGAATTTGTGGGTGAT+GGG - chr5_1:7099510-7099529 Msa0714450:intron 30.0%
TGTTCGTAATTTCTTCTTTG+GGG + chr5_1:7099563-7099582 None:intergenic 30.0%
GTGTTCGTAATTTCTTCTTT+GGG + chr5_1:7099564-7099583 None:intergenic 30.0%
TGTGTTCGTAATTTCTTCTT+TGG + chr5_1:7099565-7099584 None:intergenic 30.0%
TGACAGCTTAAAAACATTTG+GGG + chr5_1:7099606-7099625 None:intergenic 30.0%
TACAATATGATTATCAACCC+CGG - chr5_1:7099655-7099674 Msa0714450:intron 30.0%
TACTAGCTAATGTGTGATAT+TGG - chr5_1:7099877-7099896 Msa0714450:intron 30.0%
! CAAGGTTTAAAACAATGTAG+TGG + chr5_1:7100012-7100031 None:intergenic 30.0%
!! ATATTTTGAACAGTGAGTAG+TGG + chr5_1:7100037-7100056 None:intergenic 30.0%
! AATTTTGTAGAATGCGATGA+GGG + chr5_1:7100090-7100109 None:intergenic 30.0%
! ATTTTGTAGAATGTGATGAG+GGG + chr5_1:7100133-7100152 None:intergenic 30.0%
! GAATTTTGTAGAATGTGATG+AGG + chr5_1:7100135-7100154 None:intergenic 30.0%
ATATCAGTGGCAAGAATATA+TGG - chr5_1:7100510-7100529 Msa0714450:intron 30.0%
ATTATAGTTTATCTGGTGTC+TGG - chr5_1:7100641-7100660 Msa0714450:intron 30.0%
!!! TTGGTTTTGACTGGTTTATT+TGG - chr5_1:7100710-7100729 Msa0714450:intron 30.0%
AATATATGGTCCTTGAATGA+TGG - chr5_1:7100814-7100833 Msa0714450:intron 30.0%
! TAACAATACAGTTTGCGTTT+TGG - chr5_1:7100924-7100943 Msa0714450:intron 30.0%
ATACAGTTCTGTCAATATCA+TGG + chr5_1:7101022-7101041 None:intergenic 30.0%
! CATGATAACGATTATACAGA+CGG + chr5_1:7101194-7101213 None:intergenic 30.0%
!!! TTTTTTGGTGTGAAGGGTTT+GGG + chr5_1:7092489-7092508 None:intergenic 35.0%
TGGTTGACAGGAAAAGATTA+AGG + chr5_1:7092665-7092684 None:intergenic 35.0%
AAGTCTAAACCCTTGACATT+TGG + chr5_1:7092685-7092704 None:intergenic 35.0%
AGCAACAACATTATAACCGT+TGG + chr5_1:7092749-7092768 None:intergenic 35.0%
AATGTTGTTGCTACCGAATT+AGG - chr5_1:7092757-7092776 Msa0714450:CDS 35.0%
ATGTTGTTGCTACCGAATTA+GGG - chr5_1:7092758-7092777 Msa0714450:CDS 35.0%
ACAGTGACTAAACCCTAATT+CGG + chr5_1:7092773-7092792 None:intergenic 35.0%
! TGTGAAACTTTTGCACGTTT+TGG - chr5_1:7093128-7093147 Msa0714450:CDS 35.0%
GAAATCGAAACTGGAAAACA+CGG + chr5_1:7093318-7093337 None:intergenic 35.0%
CTTGATGTTGAAATCGAAAC+TGG + chr5_1:7093327-7093346 None:intergenic 35.0%
AGATTCAGAGAGAAAGAAAC+AGG - chr5_1:7093391-7093410 Msa0714450:intron 35.0%
!!! GAGACTTTTTTTCTCGATGA+TGG - chr5_1:7093527-7093546 Msa0714450:intron 35.0%
AAAGAATTTGGTACGTATGG+GGG + chr5_1:7093894-7093913 None:intergenic 35.0%
! TTCGTAATTCTTTTGGTACG+CGG + chr5_1:7093948-7093967 None:intergenic 35.0%
TGCTTTGCACATTCATGTTA+TGG + chr5_1:7094122-7094141 None:intergenic 35.0%
AATGTGCAAAGCAACTGAAT+TGG - chr5_1:7094129-7094148 Msa0714450:intron 35.0%
! TGAATTGGTTTACATTGTGC+TGG - chr5_1:7094144-7094163 Msa0714450:intron 35.0%
!! ACACATTCTGCTTTTGTGTT+TGG - chr5_1:7094186-7094205 Msa0714450:intron 35.0%
!! CACATTCTGCTTTTGTGTTT+GGG - chr5_1:7094187-7094206 Msa0714450:intron 35.0%
ATTAACAAATGCCCCATTGA+TGG - chr5_1:7094222-7094241 Msa0714450:intron 35.0%
GTACCAAATTTCCATCAATG+GGG + chr5_1:7094236-7094255 None:intergenic 35.0%
GGTACCAAATTTCCATCAAT+GGG + chr5_1:7094237-7094256 None:intergenic 35.0%
TGGTACCAAATTTCCATCAA+TGG + chr5_1:7094238-7094257 None:intergenic 35.0%
CATTTATCAACATGAAACCC+AGG + chr5_1:7094415-7094434 None:intergenic 35.0%
! GAATCTGAAAAAGAGCATGA+TGG - chr5_1:7094573-7094592 Msa0714450:CDS 35.0%
! TGTCTTTCTTTTTCTCTCGT+CGG + chr5_1:7094609-7094628 None:intergenic 35.0%
GAGAAAAAGAAAGACAGGAA+AGG - chr5_1:7094613-7094632 Msa0714450:intron 35.0%
ACGTGAAAAGGATAAAGAGA+AGG - chr5_1:7094644-7094663 Msa0714450:intron 35.0%
AACTAAATCAGTTGAACTGG+TGG + chr5_1:7094899-7094918 None:intergenic 35.0%
TTGTATGACATCGATACTTG+GGG + chr5_1:7095011-7095030 None:intergenic 35.0%
ATTGCTTCCGTATAGTGATT+AGG - chr5_1:7095122-7095141 Msa0714450:intron 35.0%
TTCATCGCCTAATCACTATA+CGG + chr5_1:7095132-7095151 None:intergenic 35.0%
ATTAGGCGATGAAGAGTAAT+GGG - chr5_1:7095139-7095158 Msa0714450:intron 35.0%
ACTAGCTGTTCATATCATCA+GGG + chr5_1:7095179-7095198 None:intergenic 35.0%
TACTAGCTGTTCATATCATC+AGG + chr5_1:7095180-7095199 None:intergenic 35.0%
TCGAATGAGTAGTTTACTAC+TGG - chr5_1:7095302-7095321 Msa0714450:CDS 35.0%
ATTCCCACATAGATCAAGTA+GGG + chr5_1:7095493-7095512 None:intergenic 35.0%
TATTCCCACATAGATCAAGT+AGG + chr5_1:7095494-7095513 None:intergenic 35.0%
GATGTTGTACATATGTCCAT+GGG + chr5_1:7095609-7095628 None:intergenic 35.0%
TGATGTTGTACATATGTCCA+TGG + chr5_1:7095610-7095629 None:intergenic 35.0%
TCTGACTTAGGAAATTCACA+TGG + chr5_1:7095642-7095661 None:intergenic 35.0%
!! AATTTTGGAAGGGCATAAGT+CGG - chr5_1:7095668-7095687 Msa0714450:CDS 35.0%
TTTAGGGACCAAAATGTTGA+TGG - chr5_1:7096034-7096053 Msa0714450:intron 35.0%
GCGCAAATGGAAATGTAAAA+TGG + chr5_1:7096244-7096263 None:intergenic 35.0%
ACCCGTCATATGAATAAAAG+AGG - chr5_1:7096319-7096338 Msa0714450:intron 35.0%
TTGCTTATATTCGAAACTGG+AGG - chr5_1:7096485-7096504 Msa0714450:CDS 35.0%
ATGGAAACATAGAATAGACG+AGG - chr5_1:7096537-7096556 Msa0714450:CDS 35.0%
TGGAAACATAGAATAGACGA+GGG - chr5_1:7096538-7096557 Msa0714450:CDS 35.0%
AGTAGACTAATAGAGGACAT+TGG - chr5_1:7096885-7096904 Msa0714450:intron 35.0%
!! ATCATCTGAACTTTTAGGTC+TGG - chr5_1:7096956-7096975 Msa0714450:intron 35.0%
!! TCATCTGAACTTTTAGGTCT+GGG - chr5_1:7096957-7096976 Msa0714450:intron 35.0%
GTATTTGGACAATAGCTGAA+GGG - chr5_1:7096993-7097012 Msa0714450:intron 35.0%
AAGATGTCACTACACTTGAT+TGG - chr5_1:7097098-7097117 Msa0714450:intron 35.0%
TGATTGGAATGTGAGTTTGA+TGG - chr5_1:7097114-7097133 Msa0714450:intron 35.0%
! GATTACTGATAGTGACTTCA+AGG - chr5_1:7097158-7097177 Msa0714450:intron 35.0%
CGGGTGAGAAAAAATAGAAA+CGG + chr5_1:7097212-7097231 None:intergenic 35.0%
CCAGAGAAAAGTTAAATAGG+GGG - chr5_1:7097394-7097413 Msa0714450:intron 35.0%
! AATGTACTCTTTAGTTCACC+TGG + chr5_1:7097842-7097861 None:intergenic 35.0%
GAGTACATTAAGCAAACACA+AGG - chr5_1:7097853-7097872 Msa0714450:intron 35.0%
!! TCTCTGAAGTGGAATAAGAA+AGG - chr5_1:7097887-7097906 Msa0714450:intron 35.0%
TTCTTACTGGAAGTTTCGAT+GGG - chr5_1:7097918-7097937 Msa0714450:CDS 35.0%
!! CAGCAATTTGATTTTCACAG+CGG - chr5_1:7097980-7097999 Msa0714450:intron 35.0%
!! AACATGTATCATGGTGTCAT+TGG + chr5_1:7098288-7098307 None:intergenic 35.0%
! AACCCAGTAAAAACTTTTGC+CGG - chr5_1:7098326-7098345 Msa0714450:intron 35.0%
ACAAGTTAGGTGTATAAACC+TGG + chr5_1:7098355-7098374 None:intergenic 35.0%
CTCTAATGTATCTGACTACT+TGG - chr5_1:7098538-7098557 Msa0714450:intron 35.0%
!! TTCACTCTGAAATAGCAGAA+AGG + chr5_1:7098746-7098765 None:intergenic 35.0%
TTCAGATGATAACACTGCAA+AGG - chr5_1:7098813-7098832 Msa0714450:CDS 35.0%
ATATTCCCTAATTGGTACCT+TGG + chr5_1:7099037-7099056 None:intergenic 35.0%
AGGAGATATATGCTATCAGA+TGG - chr5_1:7099112-7099131 Msa0714450:CDS 35.0%
CCCTAATAAGAAATTGGTGT+TGG - chr5_1:7099161-7099180 Msa0714450:intron 35.0%
GCCAACACCAATTTCTTATT+AGG + chr5_1:7099165-7099184 None:intergenic 35.0%
!! ATAAGAAATTGGTGTTGGCT+AGG - chr5_1:7099166-7099185 Msa0714450:intron 35.0%
GACGAGGAAAACAGATTATA+GGG + chr5_1:7099273-7099292 None:intergenic 35.0%
TGACGAGGAAAACAGATTAT+AGG + chr5_1:7099274-7099293 None:intergenic 35.0%
ACAGCTTAAAAACATTTGGG+GGG + chr5_1:7099604-7099623 None:intergenic 35.0%
GACAGCTTAAAAACATTTGG+GGG + chr5_1:7099605-7099624 None:intergenic 35.0%
ATTTATAGTTGTTGGGCTCT+GGG + chr5_1:7099636-7099655 None:intergenic 35.0%
TATTTATAGTTGTTGGGCTC+TGG + chr5_1:7099637-7099656 None:intergenic 35.0%
! ATTTTGTAGAATGCGATGAG+GGG + chr5_1:7100089-7100108 None:intergenic 35.0%
! GAATTTTGTAGAATGCGATG+AGG + chr5_1:7100091-7100110 None:intergenic 35.0%
! TTTTGTAGAATGTGATGAGG+GGG + chr5_1:7100132-7100151 None:intergenic 35.0%
! TGTTTTCTTGGCAACATTTC+AGG - chr5_1:7100665-7100684 Msa0714450:intron 35.0%
CCAGTCAAAACCAAAAGAAT+TGG + chr5_1:7100704-7100723 None:intergenic 35.0%
!!! CCAATTCTTTTGGTTTTGAC+TGG - chr5_1:7100701-7100720 Msa0714450:intron 35.0%
!! ACTGGTTTATTTGGTTCTAC+AGG - chr5_1:7100719-7100738 Msa0714450:intron 35.0%
!! CTGGTTTATTTGGTTCTACA+GGG - chr5_1:7100720-7100739 Msa0714450:intron 35.0%
AATGATCTTGCCATCATTCA+AGG + chr5_1:7100827-7100846 None:intergenic 35.0%
! AAAACATACAACGGTAATGG+AGG - chr5_1:7100847-7100866 Msa0714450:intron 35.0%
!!! GACAGAACTGTATTTTGGTT+CGG - chr5_1:7101029-7101048 Msa0714450:exon 35.0%
TTACAACGGAGTTACAAGAA+TGG + chr5_1:7101100-7101119 None:intergenic 35.0%
GTAACTCCGTTGTAAGTTTA+TGG - chr5_1:7101105-7101124 Msa0714450:five_prime_UTR 35.0%
TATATAATTCCCGGACGAAG+AGG + chr5_1:7092360-7092379 None:intergenic 40.0%
TCTTCGTCCGGGAATTATAT+AGG - chr5_1:7092359-7092378 Msa0714450:three_prime_UTR 40.0%
GGCAAGTCCTATATAATTCC+CGG + chr5_1:7092369-7092388 None:intergenic 40.0%
!! TTTTTGGTGTGAAGGGTTTG+GGG + chr5_1:7092488-7092507 None:intergenic 40.0%
!!! CTTTTTTGGTGTGAAGGGTT+TGG + chr5_1:7092490-7092509 None:intergenic 40.0%
AACGAGATAGTTGAGTTCGA+CGG + chr5_1:7092562-7092581 None:intergenic 40.0%
TTTCGCTACCTTCAAGAATC+AGG - chr5_1:7092582-7092601 Msa0714450:three_prime_UTR 40.0%
TTCCTGTCAACCAAATGTCA+AGG - chr5_1:7092672-7092691 Msa0714450:CDS 40.0%
TCCTGTCAACCAAATGTCAA+GGG - chr5_1:7092673-7092692 Msa0714450:CDS 40.0%
AAGTCAGCGTACCATAGAAA+TGG - chr5_1:7093261-7093280 Msa0714450:intron 40.0%
ACTCAACCTTTCGTCTTCAA+CGG + chr5_1:7093447-7093466 None:intergenic 40.0%
! AATTCTTTTGGTACGCGGTA+CGG + chr5_1:7093943-7093962 None:intergenic 40.0%
! TGCTTTTGTGTTTGGGAATG+AGG - chr5_1:7094194-7094213 Msa0714450:intron 40.0%
! GCTTTTGTGTTTGGGAATGA+GGG - chr5_1:7094195-7094214 Msa0714450:intron 40.0%
ATGCCCCATTGATGGAAATT+TGG - chr5_1:7094230-7094249 Msa0714450:intron 40.0%
ATGGAAATTTGGTACCACCT+GGG - chr5_1:7094241-7094260 Msa0714450:intron 40.0%
AAAGAAGAAGAAAGCGACAG+AGG - chr5_1:7094538-7094557 Msa0714450:intron 40.0%
AAGAAGAAGAAAGCGACAGA+GGG - chr5_1:7094539-7094558 Msa0714450:intron 40.0%
GACGAGAGAAAAAGAAAGAC+AGG - chr5_1:7094608-7094627 Msa0714450:intron 40.0%
AAGGGAGAAAGAACGTGAAA+AGG - chr5_1:7094632-7094651 Msa0714450:intron 40.0%
GGTCTCAGATCAAGAAGATA+AGG - chr5_1:7094722-7094741 Msa0714450:intron 40.0%
GGTTAATGTAAAGCTTGAGG+AGG - chr5_1:7094854-7094873 Msa0714450:intron 40.0%
AATGTAAAGCTTGAGGAGGA+TGG - chr5_1:7094858-7094877 Msa0714450:intron 40.0%
TCTCTGTTCTGTTGCATGTT+TGG - chr5_1:7094942-7094961 Msa0714450:intron 40.0%
GATTAGGCGATGAAGAGTAA+TGG - chr5_1:7095138-7095157 Msa0714450:intron 40.0%
TTAGGCGATGAAGAGTAATG+GGG - chr5_1:7095140-7095159 Msa0714450:intron 40.0%
AAAGTATGGTTGGAAGGAGA+TGG + chr5_1:7095212-7095231 None:intergenic 40.0%
TACTCATTCGAAATTCGCCA+GGG + chr5_1:7095293-7095312 None:intergenic 40.0%
TTCCCACATAGATCAAGTAG+GGG + chr5_1:7095492-7095511 None:intergenic 40.0%
TGCTCAAGGAAAATGTCACA+AGG + chr5_1:7096013-7096032 None:intergenic 40.0%
TTTGGTCCCTAAAATGCTCA+AGG + chr5_1:7096027-7096046 None:intergenic 40.0%
!! TGACGGACTAAAAATGCTGA+CGG - chr5_1:7096064-7096083 Msa0714450:intron 40.0%
! TGCACGTGGGTTATAACTAA+GGG + chr5_1:7096212-7096231 None:intergenic 40.0%
!! CATCTGAACTTTTAGGTCTG+GGG - chr5_1:7096958-7096977 Msa0714450:intron 40.0%
CGTATTTGGACAATAGCTGA+AGG - chr5_1:7096992-7097011 Msa0714450:intron 40.0%
TCTGCTGAAGAAAGCTTCAA+CGG + chr5_1:7097232-7097251 None:intergenic 40.0%
! TCTTCAGCAGAGCAATTTTG+TGG - chr5_1:7097241-7097260 Msa0714450:intron 40.0%
! CTTCAGCAGAGCAATTTTGT+GGG - chr5_1:7097242-7097261 Msa0714450:intron 40.0%
CTTATTAGGGAGGTTTGTGT+AGG - chr5_1:7097294-7097313 Msa0714450:intron 40.0%
!! CCCCCTATTTAACTTTTCTC+TGG + chr5_1:7097397-7097416 None:intergenic 40.0%
TGCTTGACCATCATAAGAAC+CGG + chr5_1:7097602-7097621 None:intergenic 40.0%
ATGATGGTCAAGCACGAATT+TGG - chr5_1:7097608-7097627 Msa0714450:intron 40.0%
AGAAGGAAAGGCAGAAGAAA+GGG + chr5_1:7097649-7097668 None:intergenic 40.0%
AAGAAGGAAAGGCAGAAGAA+AGG + chr5_1:7097650-7097669 None:intergenic 40.0%
GGTATCACTCAAAGAAGGAA+AGG + chr5_1:7097661-7097680 None:intergenic 40.0%
! GTCTGGTTTAGTTGCATTTG+TGG - chr5_1:7097702-7097721 Msa0714450:intron 40.0%
!! GACCCATATTTTCTCTGAAG+TGG - chr5_1:7097876-7097895 Msa0714450:intron 40.0%
CTTCTTACTGGAAGTTTCGA+TGG - chr5_1:7097917-7097936 Msa0714450:CDS 40.0%
! ACCCAGTAAAAACTTTTGCC+GGG - chr5_1:7098327-7098346 Msa0714450:intron 40.0%
! GATAGTTTTCCCTCCCAAAA+AGG + chr5_1:7098422-7098441 None:intergenic 40.0%
!! ATCTAGAAAGCATCATCCCA+AGG + chr5_1:7098507-7098526 None:intergenic 40.0%
AGTGTTATCATCTGAACACG+AGG + chr5_1:7098809-7098828 None:intergenic 40.0%
!!! TGATTTTAGGGAGCATTCCA+AGG - chr5_1:7099017-7099036 Msa0714450:CDS 40.0%
! AGCATTCCAAGGTACCAATT+AGG - chr5_1:7099028-7099047 Msa0714450:CDS 40.0%
! GCATTCCAAGGTACCAATTA+GGG - chr5_1:7099029-7099048 Msa0714450:CDS 40.0%
TATTTGTAGCAGGACCAGTT+GGG + chr5_1:7099140-7099159 None:intergenic 40.0%
TTATTTGTAGCAGGACCAGT+TGG + chr5_1:7099141-7099160 None:intergenic 40.0%
!! CACTCTTTCATTGACTTGCA+TGG - chr5_1:7099211-7099230 Msa0714450:intron 40.0%
CAGTTAGCAACCTAAGATTC+AGG + chr5_1:7099297-7099316 None:intergenic 40.0%
!! TAGTGCTCTAAGGGAGTATT+TGG - chr5_1:7099344-7099363 Msa0714450:CDS 40.0%
! TCGTAATTTCTTCTTTGGGG+TGG + chr5_1:7099560-7099579 None:intergenic 40.0%
TTAAAAACATTTGGGGGGAG+GGG + chr5_1:7099599-7099618 None:intergenic 40.0%
CTTAAAAACATTTGGGGGGA+GGG + chr5_1:7099600-7099619 None:intergenic 40.0%
AAGACAACAAGCATAGTTGC+AGG + chr5_1:7099824-7099843 None:intergenic 40.0%
TTGACTCTACCGTAAAGCTA+TGG - chr5_1:7100416-7100435 Msa0714450:intron 40.0%
TGACTCTACCGTAAAGCTAT+GGG - chr5_1:7100417-7100436 Msa0714450:intron 40.0%
TTCATAGCTTGAATGGACAC+AGG - chr5_1:7100461-7100480 Msa0714450:intron 40.0%
CAGTGGCAAGAATATATGGA+TGG - chr5_1:7100514-7100533 Msa0714450:intron 40.0%
!!! GTAGTTGGTGCCAATTCTTT+TGG - chr5_1:7100691-7100710 Msa0714450:intron 40.0%
TGGCTAAATACTCACCATTG+GGG + chr5_1:7100771-7100790 None:intergenic 40.0%
CTGGCTAAATACTCACCATT+GGG + chr5_1:7100772-7100791 None:intergenic 40.0%
ACTGGCTAAATACTCACCAT+TGG + chr5_1:7100773-7100792 None:intergenic 40.0%
AATGGTGAGTATTTAGCCAG+TGG - chr5_1:7100772-7100791 Msa0714450:intron 40.0%
ATGGTGAGTATTTAGCCAGT+GGG - chr5_1:7100773-7100792 Msa0714450:intron 40.0%
!!! CGGTAATGGAGGTATTTTTG+AGG - chr5_1:7100858-7100877 Msa0714450:intron 40.0%
!!! GAGGTATTTTTGAGGTCTGT+TGG - chr5_1:7100866-7100885 Msa0714450:intron 40.0%
!!! TTTTGAGGTCTGTTGGAACA+AGG - chr5_1:7100873-7100892 Msa0714450:intron 40.0%
TTGAGCAACTAGCCAAAGTA+AGG + chr5_1:7100981-7101000 None:intergenic 40.0%
AATGCTAACAAGTGCACCTA+CGG + chr5_1:7101060-7101079 None:intergenic 40.0%
TGGGAAAAAAGGGCAGTAAG+CGG + chr5_1:7092390-7092409 None:intergenic 45.0%
GAAGACACGGTGGGAAAAAA+GGG + chr5_1:7092400-7092419 None:intergenic 45.0%
AGAAGACACGGTGGGAAAAA+AGG + chr5_1:7092401-7092420 None:intergenic 45.0%
! TTCGTTGAAGAGAACGGGTT+TGG + chr5_1:7092522-7092541 None:intergenic 45.0%
CCATGTTCGTTGAAGAGAAC+GGG + chr5_1:7092527-7092546 None:intergenic 45.0%
GCCATGTTCGTTGAAGAGAA+CGG + chr5_1:7092528-7092547 None:intergenic 45.0%
ACCCTTGACATTTGGTTGAC+AGG + chr5_1:7092677-7092696 None:intergenic 45.0%
AATTTGCGGTTCGCTAGCAA+GGG + chr5_1:7093187-7093206 None:intergenic 45.0%
! AAGTACCGCGAACCAATTTG+CGG + chr5_1:7093201-7093220 None:intergenic 45.0%
CTGCGAATTCTGCAGGAATT+TGG + chr5_1:7093241-7093260 None:intergenic 45.0%
GGTTCGCTCTTCCATTTCTA+TGG + chr5_1:7093275-7093294 None:intergenic 45.0%
GAGAGAAAGAAACAGGAGAG+AGG - chr5_1:7093398-7093417 Msa0714450:intron 45.0%
TTGGAACCGTTGAAGACGAA+AGG - chr5_1:7093438-7093457 Msa0714450:intron 45.0%
TGAAGACGAAAGGTTGAGTG+AGG - chr5_1:7093448-7093467 Msa0714450:intron 45.0%
GAAGACGAAAGGTTGAGTGA+GGG - chr5_1:7093449-7093468 Msa0714450:intron 45.0%
GTATAGAGCTTCGGTATGCT+CGG + chr5_1:7093872-7093891 None:intergenic 45.0%
! ATTCTTTTGGTACGCGGTAC+GGG + chr5_1:7093942-7093961 None:intergenic 45.0%
!!! TGTGCTGGTTTTATGACTGC+AGG - chr5_1:7094159-7094178 Msa0714450:intron 45.0%
TTTGTGTTTGGGAATGAGGG+TGG - chr5_1:7094198-7094217 Msa0714450:intron 45.0%
GATGGAAATTTGGTACCACC+TGG - chr5_1:7094240-7094259 Msa0714450:intron 45.0%
TGGAAATTTGGTACCACCTG+GGG - chr5_1:7094242-7094261 Msa0714450:intron 45.0%
ACAAATGTAACAAGAGCCCC+AGG + chr5_1:7094261-7094280 None:intergenic 45.0%
TCAGAAGGGACTACAGTTCT+TGG - chr5_1:7094281-7094300 Msa0714450:intron 45.0%
GAAGTCTGCATCACACTGAT+AGG + chr5_1:7094442-7094461 None:intergenic 45.0%
AGAAGAAGAAAGCGACAGAG+GGG - chr5_1:7094540-7094559 Msa0714450:intron 45.0%
GCGACAGAGGGGTAAAAATA+AGG - chr5_1:7094551-7094570 Msa0714450:CDS 45.0%
! TGTTATCTTGTTTGCTGCCC+TGG - chr5_1:7095273-7095292 Msa0714450:CDS 45.0%
CTACTCATTCGAAATTCGCC+AGG + chr5_1:7095294-7095313 None:intergenic 45.0%
! CATAGATCAAGTAGGGGCAT+GGG + chr5_1:7095486-7095505 None:intergenic 45.0%
ACATAGATCAAGTAGGGGCA+TGG + chr5_1:7095487-7095506 None:intergenic 45.0%
ATGCCCCTACTTGATCTATG+TGG - chr5_1:7095486-7095505 Msa0714450:intron 45.0%
TGCCCCTACTTGATCTATGT+GGG - chr5_1:7095487-7095506 Msa0714450:intron 45.0%
AGCCTGTTTACCATCCACTT+AGG - chr5_1:7095758-7095777 Msa0714450:intron 45.0%
GACCTAAGTGGATGGTAAAC+AGG + chr5_1:7095763-7095782 None:intergenic 45.0%
GATGCAAGAAAGGATCCTGT+AGG + chr5_1:7095804-7095823 None:intergenic 45.0%
ACAGGATCCTTTCTTGCATC+AGG - chr5_1:7095804-7095823 Msa0714450:intron 45.0%
CAGGATCCTTTCTTGCATCA+GGG - chr5_1:7095805-7095824 Msa0714450:intron 45.0%
ATCCTTTCTTGCATCAGGGT+CGG - chr5_1:7095809-7095828 Msa0714450:intron 45.0%
! GTGCACGTGGGTTATAACTA+AGG + chr5_1:7096213-7096232 None:intergenic 45.0%
ATGGACAATACTGTGCACGT+GGG + chr5_1:7096225-7096244 None:intergenic 45.0%
AATGGACAATACTGTGCACG+TGG + chr5_1:7096226-7096245 None:intergenic 45.0%
ATAGAATAGACGAGGGCAAG+TGG - chr5_1:7096545-7096564 Msa0714450:CDS 45.0%
! AAGGGCGTGTAGAATCAGAA+AGG + chr5_1:7096833-7096852 None:intergenic 45.0%
GGGATTCAACAGCTCGTATT+TGG - chr5_1:7096978-7096997 Msa0714450:intron 45.0%
CTGCTGAAGAAAGCTTCAAC+GGG + chr5_1:7097231-7097250 None:intergenic 45.0%
CTTATGGAGAGCTTGACCTT+TGG - chr5_1:7097540-7097559 Msa0714450:intron 45.0%
! ACCTTTGGTTGCTGTTGTAC+AGG - chr5_1:7097555-7097574 Msa0714450:intron 45.0%
! CCTTTGGTTGCTGTTGTACA+GGG - chr5_1:7097556-7097575 Msa0714450:intron 45.0%
! CTTTGGTTGCTGTTGTACAG+GGG - chr5_1:7097557-7097576 Msa0714450:intron 45.0%
! TTTGGTTGCTGTTGTACAGG+GGG - chr5_1:7097558-7097577 Msa0714450:intron 45.0%
! CTTGCAACCGGTTCTTATGA+TGG - chr5_1:7097592-7097611 Msa0714450:intron 45.0%
GAATTTGGACCGCTAATGGT+AGG - chr5_1:7097623-7097642 Msa0714450:intron 45.0%
AAGAAAGGGCCTACCATTAG+CGG + chr5_1:7097635-7097654 None:intergenic 45.0%
TCGATGGGTCTGCAATTGTA+TGG - chr5_1:7097933-7097952 Msa0714450:CDS 45.0%
CGATGGGTCTGCAATTGTAT+GGG - chr5_1:7097934-7097953 Msa0714450:CDS 45.0%
GTTCAACACTCGACGTTGAT+TGG - chr5_1:7098234-7098253 Msa0714450:intron 45.0%
! GCCCGGCAAAAGTTTTTACT+GGG + chr5_1:7098331-7098350 None:intergenic 45.0%
! TGCCCGGCAAAAGTTTTTAC+TGG + chr5_1:7098332-7098351 None:intergenic 45.0%
! TGATGCCGTGCTTACCTTTT+TGG - chr5_1:7098405-7098424 Msa0714450:intron 45.0%
! GATGCCGTGCTTACCTTTTT+GGG - chr5_1:7098406-7098425 Msa0714450:intron 45.0%
TTTCGAATTCACCAGCAGTG+TGG - chr5_1:7098572-7098591 Msa0714450:intron 45.0%
TTCGAATTCACCAGCAGTGT+GGG - chr5_1:7098573-7098592 Msa0714450:intron 45.0%
TGTATCAAATGGGATCCCAC+AGG - chr5_1:7098772-7098791 Msa0714450:CDS 45.0%
TTCCTCGTCACCTGAATCTT+AGG - chr5_1:7099284-7099303 Msa0714450:CDS 45.0%
AACCTAAGATTCAGGTGACG+AGG + chr5_1:7099289-7099308 None:intergenic 45.0%
TAAAAACATTTGGGGGGAGG+GGG + chr5_1:7099598-7099617 None:intergenic 45.0%
GCTTAAAAACATTTGGGGGG+AGG + chr5_1:7099601-7099620 None:intergenic 45.0%
TGATTATCAACCCCGGTTGT+AGG - chr5_1:7099662-7099681 Msa0714450:intron 45.0%
GATTATCAACCCCGGTTGTA+GGG - chr5_1:7099663-7099682 Msa0714450:intron 45.0%
ATTATCAACCCCGGTTGTAG+GGG - chr5_1:7099664-7099683 Msa0714450:intron 45.0%
! GAACAGTGAGTAGTGGAACA+AGG + chr5_1:7100030-7100049 None:intergenic 45.0%
CAACTGATGCACTGTACAGA+AGG + chr5_1:7100399-7100418 None:intergenic 45.0%
TACCGTAAAGCTATGGGATG+CGG - chr5_1:7100423-7100442 Msa0714450:intron 45.0%
! TTCCGCATCCCATAGCTTTA+CGG + chr5_1:7100428-7100447 None:intergenic 45.0%
CACATTACAAGCAGGATGCT+GGG + chr5_1:7100564-7100583 None:intergenic 45.0%
AGCATCCTGCTTGTAATGTG+CGG - chr5_1:7100564-7100583 Msa0714450:intron 45.0%
!! CTGGTGTCTGGTTGTTTTCT+TGG - chr5_1:7100653-7100672 Msa0714450:intron 45.0%
TTCTTGGCAACATTTCAGGC+TGG - chr5_1:7100669-7100688 Msa0714450:intron 45.0%
CAACATTTCAGGCTGGTAGT+TGG - chr5_1:7100676-7100695 Msa0714450:intron 45.0%
ACTATTGCATTCAGCCCCAA+TGG - chr5_1:7100754-7100773 Msa0714450:intron 45.0%
AAAGTAAGGTGGCTCTTCTC+AGG + chr5_1:7100967-7100986 None:intergenic 45.0%
TGAGAAGAGCCACCTTACTT+TGG - chr5_1:7100966-7100985 Msa0714450:intron 45.0%
AGCAACTAGCCAAAGTAAGG+TGG + chr5_1:7100978-7100997 None:intergenic 45.0%
!!! TGTATATTATAAATTTTATA+AGG + chr5_1:7095099-7095118 None:intergenic 5.0%
!!! TAAAATAAATAAAAATTTTC+AGG - chr5_1:7097342-7097361 Msa0714450:intron 5.0%
!!! ATGTTTTTTTTTTTAAATTT+AGG - chr5_1:7097459-7097478 Msa0714450:intron 5.0%
!!! TGTTTTTTTTTTTAAATTTA+GGG - chr5_1:7097460-7097479 Msa0714450:intron 5.0%
!!! TACTTTTATTTTTTTAATTT+CGG - chr5_1:7098201-7098220 Msa0714450:intron 5.0%
CCCGTTCTCTTCAACGAACA+TGG - chr5_1:7092524-7092543 Msa0714450:three_prime_UTR 50.0%
GAGATAGTTGAGTTCGACGG+AGG + chr5_1:7092559-7092578 None:intergenic 50.0%
CAATTTGCGGTTCGCTAGCA+AGG + chr5_1:7093188-7093207 None:intergenic 50.0%
CTTGCTAGCGAACCGCAAAT+TGG - chr5_1:7093186-7093205 Msa0714450:intron 50.0%
! TTCGCGGTACTTTTGCGAAC+CGG - chr5_1:7093209-7093228 Msa0714450:intron 50.0%
TGCAGGAATTTGGACGAACC+CGG + chr5_1:7093231-7093250 None:intergenic 50.0%
CTGACTTCTGCGAATTCTGC+AGG + chr5_1:7093248-7093267 None:intergenic 50.0%
AGGAGAGAGGAAGAAACGAG+TGG - chr5_1:7093411-7093430 Msa0714450:intron 50.0%
GGAAGAAACGAGTGGAGTGT+TGG - chr5_1:7093419-7093438 Msa0714450:intron 50.0%
! CGTATGGGGGTATAGAGCTT+CGG + chr5_1:7093881-7093900 None:intergenic 50.0%
TGTTATGGGTTTCCCCTCCT+CGG - chr5_1:7094049-7094068 Msa0714450:intron 50.0%
TCGGGCTGCCCTTTATAAGA+AGG - chr5_1:7094096-7094115 Msa0714450:intron 50.0%
AATGTAACAAGAGCCCCAGG+TGG + chr5_1:7094258-7094277 None:intergenic 50.0%
GGGACTACAGTTCTTGGAGA+TGG - chr5_1:7094287-7094306 Msa0714450:intron 50.0%
! AAAGAGCATGATGGTGACCG+TGG - chr5_1:7094582-7094601 Msa0714450:intron 50.0%
! CTTTTTCTCTCGTCGGTCCA+CGG + chr5_1:7094602-7094621 None:intergenic 50.0%
! CTTGAGGAGGATGGAGCATT+TGG - chr5_1:7094867-7094886 Msa0714450:intron 50.0%
TTGTATAGGTCCAGAGCCCA+TGG - chr5_1:7095590-7095609 Msa0714450:CDS 50.0%
GTACATATGTCCATGGGCTC+TGG + chr5_1:7095603-7095622 None:intergenic 50.0%
! TTTGGAAGGGCATAAGTCGG+AGG - chr5_1:7095671-7095690 Msa0714450:CDS 50.0%
CAAGCACAGACCTAAGTGGA+TGG + chr5_1:7095771-7095790 None:intergenic 50.0%
TGCACAAGCACAGACCTAAG+TGG + chr5_1:7095775-7095794 None:intergenic 50.0%
CTTAGGTCTGTGCTTGTGCA+TGG - chr5_1:7095775-7095794 Msa0714450:intron 50.0%
TACCGACCCTGATGCAAGAA+AGG + chr5_1:7095814-7095833 None:intergenic 50.0%
GCAACACCAACACAGTCGAA+GGG + chr5_1:7097045-7097064 None:intergenic 50.0%
TGCAACACCAACACAGTCGA+AGG + chr5_1:7097046-7097065 None:intergenic 50.0%
!! TGTTGGTGTTGCAGCACATC+AGG - chr5_1:7097053-7097072 Msa0714450:intron 50.0%
!! GTTGGTGTTGCAGCACATCA+GGG - chr5_1:7097054-7097073 Msa0714450:intron 50.0%
!! TTGGTGTTGCAGCACATCAG+GGG - chr5_1:7097055-7097074 Msa0714450:intron 50.0%
CCCTGTACAACAGCAACCAA+AGG + chr5_1:7097559-7097578 None:intergenic 50.0%
GCACGAATTTGGACCGCTAA+TGG - chr5_1:7097619-7097638 Msa0714450:intron 50.0%
! AAAAACTTTTGCCGGGCACC+AGG - chr5_1:7098334-7098353 Msa0714450:intron 50.0%
AGGTGTATAAACCTGGTGCC+CGG + chr5_1:7098348-7098367 None:intergenic 50.0%
CCCTCCCAAAAAGGTAAGCA+CGG + chr5_1:7098413-7098432 None:intergenic 50.0%
!! CCGTGCTTACCTTTTTGGGA+GGG - chr5_1:7098410-7098429 Msa0714450:intron 50.0%
CAGCAGTGTGGGACTTCATT+GGG - chr5_1:7098584-7098603 Msa0714450:intron 50.0%
GGATCCCACAGGTTCATTAC+TGG - chr5_1:7098783-7098802 Msa0714450:CDS 50.0%
GAGGCCAGTAATGAACCTGT+GGG + chr5_1:7098790-7098809 None:intergenic 50.0%
GATGGGAATCAGAGTGTGGA+CGG - chr5_1:7099527-7099546 Msa0714450:intron 50.0%
AAAAACATTTGGGGGGAGGG+GGG + chr5_1:7099597-7099616 None:intergenic 50.0%
ACAAGCATAGTTGCAGGTGC+AGG + chr5_1:7099818-7099837 None:intergenic 50.0%
AAGCTATGGGATGCGGAACT+CGG - chr5_1:7100430-7100449 Msa0714450:intron 50.0%
ATTACAAGCAGGATGCTGGG+AGG + chr5_1:7100561-7100580 None:intergenic 50.0%
GCACATTACAAGCAGGATGC+TGG + chr5_1:7100565-7100584 None:intergenic 50.0%
GTTGACCGCACATTACAAGC+AGG + chr5_1:7100572-7100591 None:intergenic 50.0%
TGAGGTCTGTTGGAACAAGG+AGG - chr5_1:7100876-7100895 Msa0714450:intron 50.0%
GAGGTCTGTTGGAACAAGGA+GGG - chr5_1:7100877-7100896 Msa0714450:intron 50.0%
!!! TTTTGGTTCGGTAGTGCCGT+AGG - chr5_1:7101041-7101060 Msa0714450:five_prime_UTR 50.0%
TCCCGGACGAAGAGGTTCAA+GGG + chr5_1:7092352-7092371 None:intergenic 55.0%
TTCCCGGACGAAGAGGTTCA+AGG + chr5_1:7092353-7092372 None:intergenic 55.0%
TGTCAACGCGGCAGAAGACA+CGG + chr5_1:7092413-7092432 None:intergenic 55.0%
GTGTGCTGTGTGTGTCAACG+CGG + chr5_1:7092425-7092444 None:intergenic 55.0%
GTTGAGTTCGACGGAGGTGA+TGG + chr5_1:7092553-7092572 None:intergenic 55.0%
!! GCGAACCGCAAATTGGTTCG+CGG - chr5_1:7093193-7093212 Msa0714450:intron 55.0%
! TCGCGGTACTTTTGCGAACC+GGG - chr5_1:7093210-7093229 Msa0714450:intron 55.0%
TTTGGTACGCGGTACGGGAA+CGG + chr5_1:7093937-7093956 None:intergenic 55.0%
! GAGGAGGATGGAGCATTTGG+AGG - chr5_1:7094870-7094889 Msa0714450:intron 55.0%
GCTTGTGCATGGAGTCCTAC+AGG - chr5_1:7095786-7095805 Msa0714450:intron 55.0%
CACAGTCGAAGGGTCGTTCT+TGG + chr5_1:7097035-7097054 None:intergenic 55.0%
GAACGACCCTTCGACTGTGT+TGG - chr5_1:7097036-7097055 Msa0714450:intron 55.0%
! GTTGCTGTTGTACAGGGGGA+GGG - chr5_1:7097562-7097581 Msa0714450:intron 55.0%
! TTGCTGTTGTACAGGGGGAG+GGG - chr5_1:7097563-7097582 Msa0714450:intron 55.0%
GAGGGGACACTACTTGCAAC+CGG - chr5_1:7097580-7097599 Msa0714450:intron 55.0%
!! GCCGTGCTTACCTTTTTGGG+AGG - chr5_1:7098409-7098428 Msa0714450:intron 55.0%
CCAATGAAGTCCCACACTGC+TGG + chr5_1:7098586-7098605 None:intergenic 55.0%
CCAGCAGTGTGGGACTTCAT+TGG - chr5_1:7098583-7098602 Msa0714450:intron 55.0%
CGAGGCCAGTAATGAACCTG+TGG + chr5_1:7098791-7098810 None:intergenic 55.0%
GCTATCAGATGGAGCCCAAC+TGG - chr5_1:7099123-7099142 Msa0714450:intron 55.0%
!! GGGTGATGGGAATCAGAGTG+TGG - chr5_1:7099523-7099542 Msa0714450:intron 55.0%
CAGGTGCAGGCACAGATATC+CGG + chr5_1:7099805-7099824 None:intergenic 55.0%
AGCTATGGGATGCGGAACTC+GGG - chr5_1:7100431-7100450 Msa0714450:intron 55.0%
GGATTTGTCATGGGACCCAC+TGG + chr5_1:7100791-7100810 None:intergenic 55.0%
TCTGCTGCCAGATAGCTCCA+AGG - chr5_1:7101226-7101245 Msa0714450:five_prime_UTR 55.0%
GGCCCTTGAACCTCTTCGTC+CGG - chr5_1:7092347-7092366 Msa0714450:three_prime_UTR 60.0%
GCCCTTGAACCTCTTCGTCC+GGG - chr5_1:7092348-7092367 Msa0714450:three_prime_UTR 60.0%
AACGCGGCAGAAGACACGGT+GGG + chr5_1:7092409-7092428 None:intergenic 60.0%
TTGGTACGCGGTACGGGAAC+GGG + chr5_1:7093936-7093955 None:intergenic 60.0%
TGCACTAAAGCTCCCGCGCA+GGG + chr5_1:7094076-7094095 None:intergenic 60.0%
ATGCACTAAAGCTCCCGCGC+AGG + chr5_1:7094077-7094096 None:intergenic 60.0%
! GCGCGGGAGCTTTAGTGCAT+CGG - chr5_1:7094077-7094096 Msa0714450:intron 60.0%
! CGCGGGAGCTTTAGTGCATC+GGG - chr5_1:7094078-7094097 Msa0714450:intron 60.0%
! GGTTGCTGTTGTACAGGGGG+AGG - chr5_1:7097561-7097580 Msa0714450:intron 60.0%
GGGAATCAGAGTGTGGACGG+AGG - chr5_1:7099530-7099549 Msa0714450:intron 60.0%
ATCAGAGTGTGGACGGAGGC+AGG - chr5_1:7099534-7099553 Msa0714450:intron 60.0%
TCCCAGCTGACCCCTACAAC+CGG + chr5_1:7099677-7099696 None:intergenic 60.0%
ACAAGCAGGATGCTGGGAGG+AGG + chr5_1:7100558-7100577 None:intergenic 60.0%
CAACGCGGCAGAAGACACGG+TGG + chr5_1:7092410-7092429 None:intergenic 65.0%
CCAGCTGACCCCTACAACCG+GGG + chr5_1:7099675-7099694 None:intergenic 65.0%
CCCAGCTGACCCCTACAACC+GGG + chr5_1:7099676-7099695 None:intergenic 65.0%
CCCGGTTGTAGGGGTCAGCT+GGG - chr5_1:7099673-7099692 Msa0714450:intron 65.0%
CCCCGGTTGTAGGGGTCAGC+TGG - chr5_1:7099672-7099691 Msa0714450:intron 70.0%
TCCCCTCCTCGGACCCTGCG+CGG - chr5_1:7094060-7094079 Msa0714450:intron 75.0%
TCCCGCGCAGGGTCCGAGGA+GGG + chr5_1:7094065-7094084 None:intergenic 75.0%
AAGCTCCCGCGCAGGGTCCG+AGG + chr5_1:7094069-7094088 None:intergenic 75.0%
! CCCGCGCAGGGTCCGAGGAG+GGG + chr5_1:7094064-7094083 None:intergenic 80.0%
! CCCCTCCTCGGACCCTGCGC+GGG - chr5_1:7094061-7094080 Msa0714450:intron 80.0%
! CTCCCGCGCAGGGTCCGAGG+AGG + chr5_1:7094066-7094085 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 7092329 7101251 7092329 ID=Msa0714450;Name=Msa0714450
chr5_1 mRNA 7092329 7101251 7092329 ID=Msa0714450-mRNA-1;Parent=Msa0714450;Name=Msa0714450-mRNA-1;_AED=0.32;_eAED=0.32;_QI=214|1|0.93|1|0.92|0.86|15|270|595
chr5_1 exon 7092329 7092496 7092329 ID=Msa0714450-mRNA-1:exon:3015;Parent=Msa0714450-mRNA-1
chr5_1 exon 7092518 7092839 7092518 ID=Msa0714450-mRNA-1:exon:3014;Parent=Msa0714450-mRNA-1
chr5_1 exon 7093098 7093172 7093098 ID=Msa0714450-mRNA-1:exon:3013;Parent=Msa0714450-mRNA-1
chr5_1 exon 7094393 7094466 7094393 ID=Msa0714450-mRNA-1:exon:3012;Parent=Msa0714450-mRNA-1
chr5_1 exon 7094542 7094595 7094542 ID=Msa0714450-mRNA-1:exon:3011;Parent=Msa0714450-mRNA-1
chr5_1 exon 7094746 7094820 7094746 ID=Msa0714450-mRNA-1:exon:3010;Parent=Msa0714450-mRNA-1
chr5_1 exon 7095225 7095346 7095225 ID=Msa0714450-mRNA-1:exon:3009;Parent=Msa0714450-mRNA-1
chr5_1 exon 7095579 7095737 7095579 ID=Msa0714450-mRNA-1:exon:3008;Parent=Msa0714450-mRNA-1
chr5_1 exon 7095940 7096003 7095940 ID=Msa0714450-mRNA-1:exon:3007;Parent=Msa0714450-mRNA-1
chr5_1 exon 7096457 7096607 7096457 ID=Msa0714450-mRNA-1:exon:3006;Parent=Msa0714450-mRNA-1
chr5_1 exon 7097754 7097800 7097754 ID=Msa0714450-mRNA-1:exon:3005;Parent=Msa0714450-mRNA-1
chr5_1 exon 7097888 7097982 7097888 ID=Msa0714450-mRNA-1:exon:3004;Parent=Msa0714450-mRNA-1
chr5_1 exon 7098689 7099133 7098689 ID=Msa0714450-mRNA-1:exon:3003;Parent=Msa0714450-mRNA-1
chr5_1 exon 7099254 7099399 7099254 ID=Msa0714450-mRNA-1:exon:3002;Parent=Msa0714450-mRNA-1
chr5_1 exon 7100977 7101251 7100977 ID=Msa0714450-mRNA-1:exon:3001;Parent=Msa0714450-mRNA-1
chr5_1 five_prime_UTR 7101038 7101251 7101038 ID=Msa0714450-mRNA-1:five_prime_utr;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7100977 7101037 7100977 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7099254 7099399 7099254 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7098689 7099133 7098689 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7097888 7097982 7097888 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7097754 7097800 7097754 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7096457 7096607 7096457 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7095940 7096003 7095940 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7095579 7095737 7095579 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7095225 7095346 7095225 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7094746 7094820 7094746 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7094542 7094595 7094542 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7094393 7094466 7094393 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7093098 7093172 7093098 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 CDS 7092620 7092839 7092620 ID=Msa0714450-mRNA-1:cds;Parent=Msa0714450-mRNA-1
chr5_1 three_prime_UTR 7092518 7092619 7092518 ID=Msa0714450-mRNA-1:three_prime_utr;Parent=Msa0714450-mRNA-1
chr5_1 three_prime_UTR 7092329 7092496 7092329 ID=Msa0714450-mRNA-1:three_prime_utr;Parent=Msa0714450-mRNA-1
Gene Sequence

>Msa0714450

ATGGCTTCCATCACCTCCGTCGAACTCAACTATCTCGTTTTTCGCTACCTTCAAGAATCAGGTTTCACACATTCTGCTTTTGTGTTTGGGAATGAGGGTGGCATTAACAAATGCCCCATTGATGGAAATTTGGTACCACCTGGGGCTCTTGTTACATTTGTTCAGAAGGGACTACAGTTCTTGGAGATGGAAGCTAACTTGAATAATTGTGATGCAGACTTCGATGAAGATTTTTCGTTCTTACAACCTTTGGATCTTATCACAAAAGACGTACATGAACTGAAGAAAATGATAAATGAAAGAAGAAGAAAGCGACAGAGGGGTAAAAATAAGGAATCTGAAAAAGAGCATGATGGTGACCGTGGACCGACGAGAGAAAAAGAAAGACAGGAAAGGGAGAAAGAACGTGAAAAGGATAAAGAGAAGGTAGAAAATCATAAAGAGCAAGAACTGCAAAATGAAAATCAGATCAGTAGAGAAATGGTCTCAGATCAAGAAGATAAGGTTAATGGTGCTAAAAAAGAAGATGCTAAAAAGAAAGACAAGGTTAATGGTACTAAAAAAGAAGATGCTAAAAAAGAAGGTAAGGTTAATGGTGCTAAAAAAGAAGATAAGGTTAATGTAAAGCTTGAGGAGGATGGAGCATTTGGAGGTCCAGAGCCCATGGACATATGTACAACATCAGCATCTCAGCCATGTGAATTTCCTAAGTCAGATGTAACAATTTTGGAAGGGCATAAGTCGGAGGTCTGTGCTTGTGCATGGAGTCCTACAGGATCCTTTCTTGCATCAGGGTCTGGGGATTCAACAGCTCGTATTTGGACAATAGCTGAAGGGACGCGTAAATTAGATTCCAAGAACGACCCTTCGACTGTGTTGGTGTTGCAGCACATCAGGGGTACAACCACTGAAAAGAATAAAGATGTCACTACACTTGATTGGAATGGGGAGGGGACACTACTTGCAACCGGTTCTTATGATGGTCAAGCACGAATTTGGACCGCTAATGGTGAACTAAAGAGTACATTAAGCAAACACAAGGGACCCATATTTTCTCTGAAGTGGAATAAGAAAGGAGATTATCTTCTTACTGGAAGTTTCGATGGGTCTGCAATTGTATGGGATGTTCAAGCTGAGAAATCGAAACAGCAATTTGATTTTCACAGCGGTTCAACACTCGACGTTGATTGGCGCAATAATGTGTCATTTGCATCAAGCTCCAATGACACCATGATACATGTTTGCAAGATTGGCGAAAACAACCCAGTAAAAACTTTTGCCGGGCACCAGAGTGAAGTTAATTGTATCAAATGGGATCCCACAGGTTCATTACTGGCCTCGTGTTCAGATGATAACACTGCAAAGATATGGAGTATGAAGCAAGATAAGTATATTCATGATTTTAGGGAGCATTCCAAGGAGATATATGCTATCAGATGGAGCCCAACTGGTCCTGCTACAAATAACCCTAATAAGAAATTGGTGTTGGCTAGTGCATCAGTTGACTCTACCGTAAAGCTATGGGATGCGGAACTCGGGAAACTAATTCATAGCTTGAATGGACACAGGGATCGTGTATATACTATTGCATTCAGCCCCAATGGTGAGTATTTAGCCAGTGGGTCCCATGACAAATCCATAAATATATGGTCCTTGAATGATGGCAAGATCATTAAAACATACAACGGTAATGGAGGTATTTTTGAGGTCTGTTGGAACAAGGAGGGTGACAAGATCGCTGCCTGTTTTTCTAACAATACAGTTTGCGTTTTGGATTTCAGAATGTAA
Protein sequence

>Msa0714450

MASITSVELNYLVFRYLQESGFTHSAFVFGNEGGINKCPIDGNLVPPGALVTFVQKGLQFLEMEANLNNCDADFDEDFSFLQPLDLITKDVHELKKMINERRRKRQRGKNKESEKEHDGDRGPTREKERQEREKEREKDKEKVENHKEQELQNENQISREMVSDQEDKVNGAKKEDAKKKDKVNGTKKEDAKKEGKVNGAKKEDKVNVKLEEDGAFGGPEPMDICTTSASQPCEFPKSDVTILEGHKSEVCACAWSPTGSFLASGSGDSTARIWTIAEGTRKLDSKNDPSTVLVLQHIRGTTTEKNKDVTTLDWNGEGTLLATGSYDGQARIWTANGELKSTLSKHKGPIFSLKWNKKGDYLLTGSFDGSAIVWDVQAEKSKQQFDFHSGSTLDVDWRNNVSFASSSNDTMIHVCKIGENNPVKTFAGHQSEVNCIKWDPTGSLLASCSDDNTAKIWSMKQDKYIHDFREHSKEIYAIRWSPTGPATNNPNKKLVLASASVDSTVKLWDAELGKLIHSLNGHRDRVYTIAFSPNGEYLASGSHDKSINIWSLNDGKIIKTYNGNGGIFEVCWNKEGDKIAACFSNNTVCVLDFRM*