AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0116080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0116080 MtrunA17_Chr1g0211711 86.297 956 85 7 1 927 1 939 0.0 1600
Msa0116080 MtrunA17_Chr1g0211711 95.690 116 5 0 996 1111 936 1051 1.71e-64 238
Msa0116080 MtrunA17_Chr1g0211691 69.990 953 205 14 7 927 42 945 0.0 1204
Msa0116080 MtrunA17_Chr1g0183311 76.702 661 109 5 302 927 120 770 0.0 1001
Msa0116080 MtrunA17_Chr1g0183311 92.035 113 9 0 999 1111 770 882 6.56e-61 225
Msa0116080 MtrunA17_Chr1g0211661 73.539 616 151 4 313 927 209 813 0.0 919
Msa0116080 MtrunA17_Chr1g0211661 79.310 58 12 0 994 1051 808 865 1.78e-21 101
Msa0116080 MtrunA17_Chr5g0426961 71.569 612 155 4 318 927 129 723 0.0 882
Msa0116080 MtrunA17_Chr5g0426961 89.286 112 12 0 999 1110 723 834 1.70e-58 217
Msa0116080 MtrunA17_Chr5g0420361 66.548 562 163 8 385 927 131 686 0.0 740
Msa0116080 MtrunA17_Chr5g0420361 81.132 106 17 1 999 1104 686 788 1.01e-47 184
Msa0116080 MtrunA17_Chr6g0472441 60.637 597 173 12 385 958 73 630 0.0 692
Msa0116080 MtrunA17_Chr6g0472441 67.669 133 33 3 999 1131 608 730 3.20e-45 175
Msa0116080 MtrunA17_Chr5g0448301 59.707 546 187 6 383 927 96 609 0.0 613
Msa0116080 MtrunA17_Chr7g0275771 43.634 699 279 18 325 927 136 815 1.83e-165 514
Msa0116080 MtrunA17_Chr7g0275771 66.949 118 37 1 999 1116 815 930 2.38e-42 168
Msa0116080 MtrunA17_Chr2g0289121 45.242 599 284 11 329 927 156 710 4.06e-152 475
Msa0116080 MtrunA17_Chr2g0289121 74.545 110 28 0 999 1108 710 819 1.10e-44 174
Msa0116080 MtrunA17_Chr4g0075261 42.236 644 293 15 318 927 157 755 1.84e-151 475
Msa0116080 MtrunA17_Chr4g0075261 75.455 110 27 0 999 1108 755 864 1.04e-47 184
Msa0116080 MtrunA17_Chr1g0147021 46.828 536 246 11 323 852 864 1366 1.30e-135 451
Msa0116080 MtrunA17_Chr1g0147021 67.213 122 37 1 999 1117 1586 1707 1.44e-43 173
Msa0116080 MtrunA17_Chr1g0192011 36.597 623 315 15 329 916 267 844 3.15e-109 365
Msa0116080 MtrunA17_Chr1g0192011 46.491 114 61 0 999 1112 851 964 8.24e-28 122
Msa0116080 MtrunA17_Chr2g0281051 32.403 645 362 16 329 916 207 834 5.46e-90 311
Msa0116080 MtrunA17_Chr2g0281051 51.351 111 54 0 999 1109 845 955 1.32e-30 130
Msa0116080 MtrunA17_Chr2g0289031 51.014 296 124 3 634 927 8 284 2.13e-88 290
Msa0116080 MtrunA17_Chr2g0289031 71.818 110 31 0 999 1108 284 393 1.43e-44 166
Msa0116080 MtrunA17_Chr1g0211701 85.965 114 16 0 999 1112 6 119 7.56e-67 222
Msa0116080 MtrunA17_Chr4g0048531 42.345 307 162 6 543 843 720 1017 2.19e-65 242
Msa0116080 MtrunA17_Chr4g0048531 53.153 111 52 0 999 1109 1167 1277 3.09e-32 136
Msa0116080 MtrunA17_Chr4g0048531 34.659 176 103 4 329 494 260 433 1.00e-26 118
Msa0116080 MtrunA17_Chr8g0364421 50.584 257 93 5 439 693 5 229 8.33e-65 219
Msa0116080 MtrunA17_Chr7g0231061 60.963 187 67 2 688 874 8 188 3.80e-63 213
Msa0116080 MtrunA17_Chr8g0361381 54.545 187 81 2 630 816 26 208 1.07e-60 206
Msa0116080 MtrunA17_Chr8g0340381 64.881 168 39 4 729 895 36 184 1.95e-53 185
Msa0116080 MtrunA17_Chr2g0289091 60.714 140 55 0 708 847 23 162 2.63e-48 178
Msa0116080 MtrunA17_Chr2g0289091 77.333 75 17 0 999 1073 346 420 1.44e-32 132
Msa0116080 MtrunA17_Chr2g0289041 42.381 210 112 4 351 559 2 203 4.67e-43 155
Msa0116080 MtrunA17_Chr8g0364411 60.360 111 44 0 329 439 33 143 9.19e-38 138
Msa0116080 MtrunA17_Chr1g0211671 76.190 63 15 0 1050 1112 15 77 6.50e-28 109
Msa0116080 MtrunA17_Chr3g0119761 68.831 77 23 1 802 877 55 131 1.99e-24 99.8
Msa0116080 MtrunA17_Chr8g0361391 81.132 53 9 1 999 1051 86 137 6.73e-23 96.7
Msa0116080 MtrunA17_Chr8g0361391 51.724 58 28 0 870 927 29 86 4.17e-11 62.8
Msa0116080 MtrunA17_Chr2g0289101 34.646 127 78 4 461 586 8 130 2.27e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0116080 AT1G11950.2 47.039 608 282 12 325 928 189 760 7.05e-173 529
Msa0116080 AT1G11950.2 76.744 43 10 0 999 1041 759 801 1.14e-15 82.8
Msa0116080 AT1G11950.1 47.039 608 282 12 325 928 189 760 3.37e-172 530
Msa0116080 AT1G11950.1 71.053 114 33 0 999 1112 759 872 6.07e-48 186
Msa0116080 AT1G11950.3 47.039 608 282 12 325 928 189 760 3.37e-172 530
Msa0116080 AT1G11950.3 71.053 114 33 0 999 1112 759 872 6.07e-48 186
Msa0116080 AT1G62310.1 46.458 607 291 13 328 928 208 786 5.41e-171 527
Msa0116080 AT1G62310.1 76.768 99 23 0 999 1097 785 883 2.77e-43 171
Msa0116080 AT4G00990.2 40.780 667 301 16 329 927 80 720 4.26e-141 445
Msa0116080 AT4G00990.2 70.370 54 16 0 996 1049 717 770 1.93e-17 88.6
Msa0116080 AT4G00990.3 40.780 667 301 16 329 927 80 720 5.42e-141 444
Msa0116080 AT4G00990.3 62.903 62 23 0 996 1057 717 778 3.85e-18 90.9
Msa0116080 AT4G00990.1 40.780 667 301 16 329 927 80 720 1.22e-140 446
Msa0116080 AT4G00990.1 68.269 104 33 0 996 1099 717 820 3.73e-39 158
Msa0116080 AT3G07610.1 52.956 389 161 4 540 927 415 782 1.31e-121 400
Msa0116080 AT3G07610.1 45.918 196 105 1 328 523 154 348 1.41e-50 195
Msa0116080 AT3G07610.1 75.490 102 25 0 999 1100 782 883 8.54e-43 170
Msa0116080 AT3G07610.3 49.755 408 167 5 540 927 415 804 9.04e-114 379
Msa0116080 AT3G07610.3 45.918 196 105 1 328 523 154 348 1.69e-50 195
Msa0116080 AT3G07610.3 75.490 102 25 0 999 1100 804 905 1.04e-42 170
Msa0116080 AT3G07610.2 56.184 283 117 2 540 822 415 690 5.37e-92 312
Msa0116080 AT3G07610.2 45.918 196 105 1 328 523 154 348 2.04e-50 192
Msa0116080 AT1G09060.2 32.000 625 344 18 322 914 197 772 5.34e-82 288
Msa0116080 AT1G09060.2 45.614 114 61 1 999 1112 782 894 9.10e-25 112
Msa0116080 AT1G09060.1 32.000 625 344 18 322 914 197 772 5.34e-82 288
Msa0116080 AT1G09060.1 45.614 114 61 1 999 1112 782 894 9.10e-25 112
Msa0116080 AT1G09060.4 32.000 625 344 18 322 914 211 786 7.15e-82 288
Msa0116080 AT1G09060.4 45.614 114 61 1 999 1112 796 908 9.24e-25 112
Msa0116080 AT1G09060.3 32.000 625 344 18 322 914 211 786 7.15e-82 288
Msa0116080 AT1G09060.3 45.614 114 61 1 999 1112 796 908 9.24e-25 112
Msa0116080 AT4G21430.1 30.928 388 239 6 552 916 412 793 3.00e-49 190
Msa0116080 AT4G21430.1 45.946 111 60 0 999 1109 803 913 3.56e-25 113
Msa0116080 AT4G21430.1 28.261 184 128 4 297 478 196 377 9.95e-13 73.2

Find 244 sgRNAs with CRISPR-Local

Find 858 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGATCTGTATATTCTTTAT+AGG 0.218933 1_3:+34951136 None:intergenic
AAGTACTTTCAGCATATATT+TGG 0.244019 1_3:+34953513 None:intergenic
GTCGCCCTGATTGGCTAAAT+TGG 0.253094 1_3:-34951250 Msa0116080:CDS
TCACCATCACCTTCAGCTTT+TGG 0.263787 1_3:+34952713 None:intergenic
TGCGTTCCAGTCATGGAAAA+TGG 0.264659 1_3:-34950291 Msa0116080:CDS
AATGTGCACCAATTCTTTAC+TGG 0.265399 1_3:-34951284 Msa0116080:CDS
TCATCCAAACGTCTTAAATA+TGG 0.272167 1_3:+34953487 None:intergenic
TTTCTACCGCGTTTCTTTGC+CGG 0.274566 1_3:+34954781 None:intergenic
CCTAAAACATATATTGCTTA+TGG 0.279102 1_3:-34951050 Msa0116080:CDS
ACTGACCAGTGAAAAGAATT+TGG 0.282893 1_3:-34954311 Msa0116080:CDS
CGAGGGCGTGATTATCTTCA+TGG 0.286488 1_3:-34952848 Msa0116080:CDS
TCAGCCTTACTCTTTCTTCC+TGG 0.291739 1_3:+34954913 None:intergenic
GGATGAGGCTGTGAAGAAAA+AGG 0.294538 1_3:-34954626 Msa0116080:CDS
AGTACATTGCTAACAATTAC+AGG 0.298489 1_3:+34952401 None:intergenic
GTTGTACCAATTGTTTAAAC+AGG 0.300702 1_3:+34953949 None:intergenic
TACCAAGCACAAAACACTTT+TGG 0.300838 1_3:-34952312 Msa0116080:CDS
TTTAAATATTCCTCCAACTT+AGG 0.302596 1_3:+34950216 None:intergenic
AGTTGCAGATATCCCTAAAA+AGG 0.306036 1_3:-34953104 Msa0116080:CDS
TGAAGATTACTTGTCGGATT+TGG 0.306329 1_3:-34954647 Msa0116080:CDS
TGCTGAAACGGTGCCGTTAA+AGG 0.315756 1_3:-34955103 Msa0116080:CDS
GCATACCCTGTTTAAACAAT+TGG 0.324245 1_3:-34953955 Msa0116080:intron
ATTCCTTAGACGGTGCTCTC+TGG 0.324744 1_3:-34950263 Msa0116080:CDS
GTGCCAGACATAACAAAATA+TGG 0.324976 1_3:+34942182 None:intergenic
GTTCTTGTTTAAAGCCTGTT+AGG 0.328431 1_3:-34952565 Msa0116080:CDS
CTTTCTTCAAATAAGTTAGA+AGG 0.331972 1_3:+34951197 None:intergenic
GATGAACAAGATGGGGAAAA+TGG 0.335461 1_3:-34954361 Msa0116080:CDS
TGTCATTTCTCTGACATTGA+TGG 0.335478 1_3:+34954023 None:intergenic
AGGAAGGAAATTTCTAGTTC+TGG 0.339985 1_3:-34954493 Msa0116080:CDS
TCTTCCATATTTAAGACGTT+TGG 0.340249 1_3:-34953491 Msa0116080:CDS
AGGAGGCTTAAGGAGGAGTA+TGG 0.344150 1_3:-34944586 Msa0116080:intron
GGATCTGTATATTCTTTATA+GGG 0.347461 1_3:+34951137 None:intergenic
ATCCCAGAGAGCACCGTCTA+AGG 0.348922 1_3:+34950260 None:intergenic
CTTCGTGGCGGAAAGCTTCT+AGG 0.350575 1_3:-34952905 Msa0116080:CDS
TGATGCTGTTCAATGCATTC+AGG 0.352889 1_3:+34954226 None:intergenic
ACCGAAAAGGAAAATAAAAC+AGG 0.357268 1_3:-34954751 Msa0116080:CDS
CACCCAGATCTTGACCATTC+AGG 0.357316 1_3:+34952767 None:intergenic
TATGTAATACCTTCAGATTT+CGG 0.357408 1_3:+34944393 None:intergenic
AGAAGCATTTCAGAGAGTTC+AGG 0.360974 1_3:-34950194 Msa0116080:CDS
AAACAGCATCTCCTAGCTTC+TGG 0.362555 1_3:+34944444 None:intergenic
ATATCCTCTTCATTCCTAAC+AGG 0.364490 1_3:+34952551 None:intergenic
TGTGATTTACCGGAAGTTTA+CGG 0.365363 1_3:+34943376 None:intergenic
GTCCTTCAACGACGCCGTTT+CGG 0.366610 1_3:+34955026 None:intergenic
AGTAACTCAGAGATGCAATT+TGG 0.373196 1_3:+34952656 None:intergenic
GTTCAACAAGAGAAATTCTA+AGG 0.374892 1_3:-34954191 Msa0116080:intron
AGTGATGAAGCTGAACATAA+AGG 0.377667 1_3:-34954556 Msa0116080:CDS
GTGATGAAGCTGAACATAAA+GGG 0.380882 1_3:-34954555 Msa0116080:CDS
TAACCTTGCTGTGAAGTTGC+CGG 0.383168 1_3:-34951099 Msa0116080:CDS
TGAGGCCAATTTAGCCAATC+AGG 0.389236 1_3:+34951245 None:intergenic
AAGATAAACTCAAACTCAAT+TGG 0.397071 1_3:+34952872 None:intergenic
GTTGGAGGAAGCAAGGTTAG+TGG 0.397522 1_3:-34942522 Msa0116080:CDS
TGATAAGAAAATACGGTAGA+AGG 0.397866 1_3:-34954945 Msa0116080:CDS
ATTCCTGAATGGTCAAGATC+TGG 0.400760 1_3:-34952770 Msa0116080:CDS
GCGTTCCAGTCATGGAAAAT+GGG 0.405689 1_3:-34950290 Msa0116080:CDS
GGAGCTACATGGCGATAATC+AGG 0.407696 1_3:-34950379 Msa0116080:CDS
TCTGTGGACCTGTGATTTAC+CGG 0.411222 1_3:+34943366 None:intergenic
TATGGATTTGAGCAGGAACT+TGG 0.416922 1_3:-34951032 Msa0116080:CDS
TTGTGTACCCAGTAAAGAAT+TGG 0.418147 1_3:+34951276 None:intergenic
ATTGAATGAAGATTACTTGT+CGG 0.418626 1_3:-34954653 Msa0116080:CDS
GCCACGTCATCAACCTTTAA+CGG 0.420342 1_3:+34955090 None:intergenic
TACATACACAAAATCATTCA+TGG 0.421917 1_3:+34946876 None:intergenic
AATGTACTTGAATGTACATC+TGG 0.421952 1_3:-34952386 Msa0116080:CDS
CTCAACGTCATGGTCGTTGT+TGG 0.423084 1_3:+34953540 None:intergenic
ACACAAAAGGTCGCCCTGAT+TGG 0.425060 1_3:-34951259 Msa0116080:CDS
AAAAGTTCAAATGGAGAGAA+AGG 0.425443 1_3:+34955156 None:intergenic
CGAGCATAAGAGGAGGCTTA+AGG 0.430431 1_3:-34944596 Msa0116080:CDS
ATACCTTCAGATTTCGGACT+TGG 0.436051 1_3:+34944399 None:intergenic
CACAAAATCAAGAGCAACCT+TGG 0.439982 1_3:+34943443 None:intergenic
TTCAACGTCACTGGAGCAAA+GGG 0.444849 1_3:-34952427 Msa0116080:CDS
GACGATTTAGCTTCTGATGA+AGG 0.445346 1_3:-34955006 Msa0116080:CDS
GTAATGGCCAACTCAAGATT+CGG 0.445687 1_3:-34946856 Msa0116080:CDS
AATGTACATCTGGTTTAAGC+TGG 0.447849 1_3:-34952376 Msa0116080:CDS
ATGAACGGAAATAGAGTTTC+CGG 0.450390 1_3:+34954810 None:intergenic
ATTTGACTATCGAGCATAAG+AGG 0.450485 1_3:-34944606 Msa0116080:CDS
TTCTTTACTGGGTACACAAA+AGG 0.450970 1_3:-34951272 Msa0116080:CDS
TCAAATAAAAGTGCTGATCA+TGG 0.451104 1_3:+34944623 None:intergenic
CAGGTCCACAGAGGACAAAT+TGG 0.454737 1_3:-34943355 Msa0116080:CDS
TTTAGGTTTACACCAAGAAA+AGG 0.454810 1_3:-34946918 Msa0116080:intron
AAGCTATTGATTGCTTAGAT+TGG 0.456101 1_3:-34952283 Msa0116080:CDS
GAAGTGGAGAAGAAATCAAA+TGG 0.457987 1_3:-34946831 Msa0116080:CDS
TAATGGCCAACTCAAGATTC+GGG 0.458601 1_3:-34946855 Msa0116080:CDS
GCTTGATCTGGTGGAGAAGT+TGG 0.461045 1_3:-34942540 Msa0116080:CDS
TATATATGCTATGCTTGATC+TGG 0.462454 1_3:-34942552 Msa0116080:CDS
GAGAGAGGATGTTCCTAAGT+TGG 0.464977 1_3:-34950229 Msa0116080:CDS
TGATTGGCTAAATTGGCCTC+AGG 0.470753 1_3:-34951243 Msa0116080:CDS
CTTTGTTGCTGTGAGCTTCG+TGG 0.470782 1_3:-34952920 Msa0116080:CDS
TTCCTTAGACGGTGCTCTCT+GGG 0.471924 1_3:-34950262 Msa0116080:CDS
CTCCGAAACGGCGTCGTTGA+AGG 0.474138 1_3:-34955028 Msa0116080:CDS
GTTGCAAACTTCACGCCCTC+TGG 0.475965 1_3:-34942500 Msa0116080:intron
AGAATAACCTTTAATATCAT+CGG 0.477151 1_3:+34954273 None:intergenic
TTTAACGGAAGAAGAATCTT+CGG 0.478230 1_3:+34954969 None:intergenic
AAGGTGCTGATGTGGTAGGA+GGG 0.479079 1_3:-34954726 Msa0116080:CDS
TTCAATGATTTAATCTTCCT+AGG 0.480160 1_3:+34954670 None:intergenic
AGAAGAAACCTGGTAGGAAA+AGG 0.480370 1_3:-34954513 Msa0116080:CDS
TGAGGAAGAGTGAAAGGCCT+AGG 0.480507 1_3:-34954687 Msa0116080:CDS
AATGATGAAGATGAACAAGA+TGG 0.481647 1_3:-34954370 Msa0116080:CDS
ATGATGAAGATGAACAAGAT+GGG 0.482973 1_3:-34954369 Msa0116080:CDS
GTCAGAGAAATGACAAGGGC+AGG 0.483009 1_3:-34954015 Msa0116080:CDS
GAAGGTGCTGATGTGGTAGG+AGG 0.485577 1_3:-34954727 Msa0116080:CDS
TCTTGACCATTCAGGAATCT+CGG 0.486716 1_3:+34952775 None:intergenic
GAAGTGTGCTTCTCAGTTCA+AGG 0.488983 1_3:+34952681 None:intergenic
AAACAACACTGGTGCTGAAA+CGG 0.491743 1_3:-34955115 Msa0116080:CDS
ATGTGCACCAATTCTTTACT+GGG 0.492244 1_3:-34951283 Msa0116080:CDS
ATTTGAGCAGGAACTTGGGC+GGG 0.495309 1_3:-34951027 Msa0116080:CDS
ACGTTTGGATGAAGAGCAAA+TGG 0.496696 1_3:-34953476 Msa0116080:CDS
TGAAGAGCAAATGGCTGAGA+AGG 0.497473 1_3:-34953467 Msa0116080:CDS
ACAGTATAAAATGTTATCAC+TGG 0.497517 1_3:+34952490 None:intergenic
GAAACCAGGAAGAAAGAGTA+AGG 0.501881 1_3:-34954917 Msa0116080:CDS
TATTGCTTATGGATTTGAGC+AGG 0.503016 1_3:-34951039 Msa0116080:CDS
CTTGACCATTCAGGAATCTC+GGG 0.507043 1_3:+34952776 None:intergenic
AGAGGAATTCCGTAAACTTC+CGG 0.508664 1_3:-34943385 Msa0116080:CDS
TGTATATTCTTTATAGGGCA+AGG 0.509994 1_3:+34951142 None:intergenic
TTACTTGTCGGATTTGGATG+AGG 0.510978 1_3:-34954641 Msa0116080:CDS
GTTAAAGTGATAAGAAAATA+CGG 0.512225 1_3:-34954952 Msa0116080:CDS
TTATGTAGATTTACAGCCCT+GGG 0.513523 1_3:+34952467 None:intergenic
AGGAAGAAGAAGGTCATAAT+CGG 0.513842 1_3:-34954592 Msa0116080:CDS
CTGACATTGATGGCACATCA+AGG 0.514049 1_3:+34954033 None:intergenic
ACCATTCAGGAATCTCGGGC+AGG 0.514330 1_3:+34952780 None:intergenic
GCGATCATCTGTACTTATCA+AGG 0.516406 1_3:-34953665 Msa0116080:intron
GGCTGTAAATCTACATAATG+AGG 0.517325 1_3:-34952462 Msa0116080:CDS
AACTCAAGATTCGGGAGAAG+TGG 0.517503 1_3:-34946847 Msa0116080:CDS
TTTCAACGTCACTGGAGCAA+AGG 0.524189 1_3:-34952428 Msa0116080:CDS
TGGTAGAACTGTTAAGATTG+AGG 0.524235 1_3:-34954341 Msa0116080:CDS
TAAAGGTTATTCTTTAAGAA+CGG 0.524469 1_3:-34954263 Msa0116080:CDS
TTTGAGCAGGAACTTGGGCG+GGG 0.525966 1_3:-34951026 Msa0116080:CDS
TGAATTATCAAGCATGATAG+TGG 0.526520 1_3:+34950347 None:intergenic
CTTTGCCGGAGTGGCATGAA+CGG 0.528885 1_3:+34954795 None:intergenic
ATATGCTATGCTTGATCTGG+TGG 0.530201 1_3:-34942549 Msa0116080:CDS
TGGAGGATGATCGATCTGAT+TGG 0.532334 1_3:-34946584 Msa0116080:CDS
GACTTGTAGGAATTGAACCT+TGG 0.533351 1_3:-34944475 Msa0116080:intron
TCTGGCTTTAGAACATCATC+CGG 0.535804 1_3:+34951080 None:intergenic
ATTATGTAGATTTACAGCCC+TGG 0.540030 1_3:+34952466 None:intergenic
ACTTCTCCCGAATCTTGAGT+TGG 0.540519 1_3:+34946849 None:intergenic
ACTTGGTGCGGACAACCAGC+TGG 0.541187 1_3:+34944416 None:intergenic
TTCCTGAATGGTCAAGATCT+GGG 0.542203 1_3:-34952769 Msa0116080:CDS
ATAAAAGTGCTGATCATGGA+TGG 0.542431 1_3:+34944627 None:intergenic
GCACCGTGAGCAAGACAAGA+GGG 0.549677 1_3:-34950400 Msa0116080:CDS
AACTCAGAGATGCAATTTGG+TGG 0.552022 1_3:+34952659 None:intergenic
TCAGATGTACAAAATGCAAA+CGG 0.556532 1_3:-34953988 Msa0116080:CDS
GCTGAAGGTGATGGTGATCA+TGG 0.557225 1_3:-34952707 Msa0116080:CDS
GGTGATGATGACATGGCAGC+CGG 0.559212 1_3:-34954829 Msa0116080:CDS
AAGGTATCCTCACTTGAAAG+AGG 0.562825 1_3:-34953746 Msa0116080:CDS
TATTTCCGTTCATGCCACTC+CGG 0.564491 1_3:-34954800 Msa0116080:CDS
TACCTCCAATTTGTCCTCTG+TGG 0.565315 1_3:+34943350 None:intergenic
ACGGAGGAAGCGTTTGAGAA+CGG 0.565695 1_3:-34954874 Msa0116080:CDS
GGGGAAGGTGCTGATGTGGT+AGG 0.566654 1_3:-34954730 Msa0116080:CDS
AAGTGGAGAAGAAATCAAAT+GGG 0.566767 1_3:-34946830 Msa0116080:intron
ATGTACATCTGGTTTAAGCT+GGG 0.567172 1_3:-34952375 Msa0116080:CDS
ATGGATTTGAGCAGGAACTT+GGG 0.568762 1_3:-34951031 Msa0116080:CDS
TTCAGATTTCGGACTTGGTG+CGG 0.569534 1_3:+34944404 None:intergenic
GCTCCCTCTTGTCTTGCTCA+CGG 0.570052 1_3:+34950397 None:intergenic
GATTTGAGCAGGAACTTGGG+CGG 0.570180 1_3:-34951028 Msa0116080:CDS
ACCGCGTTTCTTTGCCGGAG+TGG 0.570477 1_3:+34954786 None:intergenic
CCCTGCCCGAGATTCCTGAA+TGG 0.574410 1_3:-34952781 Msa0116080:CDS
GTAAACTTCCGGTAAATCAC+AGG 0.577040 1_3:-34943374 Msa0116080:CDS
ACAAGCTATTGTCTCCGAAA+CGG 0.577131 1_3:-34955040 Msa0116080:CDS
GAGTTTGAGTTTATCTTCCG+AGG 0.578175 1_3:-34952866 Msa0116080:CDS
CCACTGCTCTCCTTTAAAGC+AGG 0.579600 1_3:-34950166 Msa0116080:intron
CACGAAGCTCACAGCAACAA+AGG 0.579879 1_3:+34952921 None:intergenic
GAATATACAGATCCTTTCAA+AGG 0.581672 1_3:-34951128 Msa0116080:CDS
AGGTTAAGAACACCTTTGAA+AGG 0.581830 1_3:+34951116 None:intergenic
CAAGACAAGAGGGAGCTACA+TGG 0.584081 1_3:-34950390 Msa0116080:CDS
CGTTCCAGTCATGGAAAATG+GGG 0.586219 1_3:-34950289 Msa0116080:CDS
TCTTTCAATTTCAAAACCTG+AGG 0.586296 1_3:+34951227 None:intergenic
AACAGGGGAAGGTGCTGATG+TGG 0.587266 1_3:-34954734 Msa0116080:CDS
AAGGAAAATAAAACAGGGGA+AGG 0.587449 1_3:-34954745 Msa0116080:CDS
ATGCATTGAACAGCATCAAA+CGG 0.587455 1_3:-34954221 Msa0116080:CDS
TCTTCAAATAAGTTAGAAGG+AGG 0.588526 1_3:+34951200 None:intergenic
TGAAATCGAGAAGGAGAAGA+CGG 0.589053 1_3:-34954893 Msa0116080:CDS
CCGAAAAGGAAAATAAAACA+GGG 0.590176 1_3:-34954750 Msa0116080:CDS
GCTTGGTATTGCTTATCTGA+CGG 0.590810 1_3:+34952327 None:intergenic
TTGGCGTGAGGAAGAGTGAA+AGG 0.593194 1_3:-34954693 Msa0116080:CDS
GCTGGGAACCGCTTGTCATG+TGG 0.594440 1_3:-34952358 Msa0116080:CDS
AGTTTGAGTTTATCTTCCGA+GGG 0.594469 1_3:-34952865 Msa0116080:CDS
CAGAGAAGAAGAAACCTGGT+AGG 0.597254 1_3:-34954519 Msa0116080:CDS
AAGACAGAGAAGAAGAAACC+TGG 0.600967 1_3:-34954523 Msa0116080:CDS
AGCACCGTGAGCAAGACAAG+AGG 0.602066 1_3:-34950401 Msa0116080:CDS
TGATGAAGATGAACAAGATG+GGG 0.602700 1_3:-34954368 Msa0116080:CDS
TGATGTTCTAAAGCCAGACA+TGG 0.603316 1_3:-34951075 Msa0116080:CDS
TAAAAGTGCTGATCATGGAT+GGG 0.604516 1_3:+34944628 None:intergenic
CGAGTGCTTTCGTTTGACAG+AGG 0.605461 1_3:-34943403 Msa0116080:CDS
GAAACGTGGTAGGAAGAAGA+AGG 0.606573 1_3:-34954602 Msa0116080:CDS
TGATGAAGCTGAACATAAAG+GGG 0.606979 1_3:-34954554 Msa0116080:CDS
GAAACCTGGTAGGAAAAGGA+AGG 0.610046 1_3:-34954509 Msa0116080:CDS
GTCCACAGAGGACAAATTGG+AGG 0.610429 1_3:-34943352 Msa0116080:intron
AAAGCCTGTTAGGAATGAAG+AGG 0.611246 1_3:-34952555 Msa0116080:CDS
ATTCCCTGTCCAAAAGCTGA+AGG 0.611859 1_3:-34952722 Msa0116080:CDS
ATTTGGAGAGCTCAACGTCA+TGG 0.614643 1_3:+34953530 None:intergenic
CCTGCTTTAAAGGAGAGCAG+TGG 0.616732 1_3:+34950166 None:intergenic
TGGAGAAGTTGGAGGAAGCA+AGG 0.617868 1_3:-34942529 Msa0116080:CDS
GGGTGGCATGCAAATGATGA+TGG 0.617923 1_3:-34952749 Msa0116080:CDS
GAGATAGAAGCAAAGAGACA+AGG 0.619116 1_3:-34953445 Msa0116080:intron
AGAAGATGACGTTGTTGATG+AGG 0.619855 1_3:-34946624 Msa0116080:CDS
TATACACAATAACACAAGGA+AGG 0.620376 1_3:-34952531 Msa0116080:CDS
GAGTAAGGCTGAAATCGAGA+AGG 0.620431 1_3:-34954902 Msa0116080:CDS
CCATTCAGGAATCTCGGGCA+GGG 0.621141 1_3:+34952781 None:intergenic
TCGGGCAGGGCAGCAGCACG+AGG 0.621316 1_3:+34952794 None:intergenic
ACAAAGGAAGAAACGAGTAA+AGG 0.621927 1_3:-34954850 Msa0116080:CDS
TTCATGGTGGAAAAGAAGAG+AGG 0.621997 1_3:-34952832 Msa0116080:CDS
TTGCAATTACCACAGCACAC+TGG 0.624403 1_3:+34953703 None:intergenic
TCAGAGAAATGACAAGGGCA+GGG 0.624776 1_3:-34954014 Msa0116080:CDS
TCATGGTGGAAAAGAAGAGA+GGG 0.625856 1_3:-34952831 Msa0116080:CDS
GAGGCCAATTTAGCCAATCA+GGG 0.627515 1_3:+34951246 None:intergenic
TGAAGTGAAATTGAAATCTG+AGG 0.628039 1_3:-34950454 Msa0116080:CDS
TTGTACCAATTGTTTAAACA+GGG 0.628105 1_3:+34953950 None:intergenic
GAAGTGAAATTGAAATCTGA+GGG 0.629648 1_3:-34950453 Msa0116080:CDS
CATGAAGATAATCACGCCCT+CGG 0.633290 1_3:+34952849 None:intergenic
TGTCCAAAAGCTGAAGGTGA+TGG 0.639166 1_3:-34952716 Msa0116080:CDS
AGAGGATGTTCCTAAGTTGG+AGG 0.639258 1_3:-34950226 Msa0116080:CDS
GCATAAGAGGAGGCTTAAGG+AGG 0.640950 1_3:-34944593 Msa0116080:CDS
CTACATGGCGATAATCAGGA+TGG 0.644609 1_3:-34950375 Msa0116080:CDS
GCCGTTAAAGGTTGATGACG+TGG 0.646340 1_3:-34955091 Msa0116080:CDS
GAGGCATGTCCAGTGTGCTG+TGG 0.646992 1_3:-34953712 Msa0116080:CDS
TGATCTGGTGGAGAAGTTGG+AGG 0.647545 1_3:-34942537 Msa0116080:CDS
CAATCAACAGTGGATCGAAG+AGG 0.650173 1_3:-34954059 Msa0116080:intron
TTTGTGTCTCCTGAAAATGT+TGG 0.652340 1_3:-34943426 Msa0116080:CDS
TGTTGCTGTGAGCTTCGTGG+CGG 0.653472 1_3:-34952917 Msa0116080:CDS
GAAAGTAATCGTCAACAAGG+TGG 0.658450 1_3:-34946647 Msa0116080:CDS
TCAATGTCAGAGAAATGACA+AGG 0.658738 1_3:-34954020 Msa0116080:CDS
GAGTAAAGGTGATGATGACA+TGG 0.658746 1_3:-34954836 Msa0116080:CDS
TTTAGAGTAGGAAGAAAATG+CGG 0.659328 1_3:+34955187 None:intergenic
GCACCAAGTCCGAAATCTGA+AGG 0.659826 1_3:-34944402 Msa0116080:intron
AGCGTTTGAGAACGGAACAA+AGG 0.661170 1_3:-34954866 Msa0116080:CDS
CGAAAAGGAAAATAAAACAG+GGG 0.664314 1_3:-34954749 Msa0116080:CDS
GATGTTCTAAAGCCAGACAT+GGG 0.664375 1_3:-34951074 Msa0116080:CDS
GCCACTCCGGCAAAGAAACG+CGG 0.668248 1_3:-34954787 Msa0116080:CDS
AAAAGTGCTGATCATGGATG+GGG 0.670907 1_3:+34944629 None:intergenic
CATCCGGCAACTTCACAGCA+AGG 0.672248 1_3:+34951096 None:intergenic
GCGGGTGAAGAAAACAACAC+TGG 0.677579 1_3:-34955126 Msa0116080:CDS
GAAGAAAGTAATCGTCAACA+AGG 0.678728 1_3:-34946650 Msa0116080:CDS
AATGCACGCCACATGACAAG+CGG 0.682465 1_3:+34952350 None:intergenic
GAAAGAGGAGAAAATTGCTG+AGG 0.682762 1_3:-34953731 Msa0116080:CDS
TGATTGCTTAGATTGGTGCG+AGG 0.685495 1_3:-34952276 Msa0116080:intron
TGACTATCGAGCATAAGAGG+AGG 0.692197 1_3:-34944603 Msa0116080:CDS
GGGCGTGATTATCTTCATGG+TGG 0.696150 1_3:-34952845 Msa0116080:CDS
AGGATATACACAATAACACA+AGG 0.701108 1_3:-34952535 Msa0116080:CDS
ATGAACTCAGCACAATGACG+AGG 0.704061 1_3:+34951170 None:intergenic
CGTGGCGGAAAGCTTCTAGG+TGG 0.704429 1_3:-34952902 Msa0116080:CDS
TCAACGTCACTGGAGCAAAG+GGG 0.706731 1_3:-34952426 Msa0116080:CDS
TTCTGATGAAGGTGATGACG+TGG 0.723150 1_3:-34954995 Msa0116080:CDS
CAATGTCAGAGAAATGACAA+GGG 0.723230 1_3:-34954019 Msa0116080:CDS
GTTCCAGTCATGGAAAATGG+GGG 0.732208 1_3:-34950288 Msa0116080:CDS
AATCGAGAAGGAGAAGACGG+AGG 0.733811 1_3:-34954890 Msa0116080:CDS
CTGAATGGTCAAGATCTGGG+TGG 0.752133 1_3:-34952766 Msa0116080:CDS
GGTAAATCACAGGTCCACAG+AGG 0.770669 1_3:-34943364 Msa0116080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTGTAAAAGTATAAT+TGG - chr1_3:34943572-34943591 Msa0116080:intron 10.0%
!! ATGACAAATTTAAAAAAAAT+TGG + chr1_3:34944227-34944246 None:intergenic 10.0%
!!! ATTTTTTTTAAATTTGTCAT+TGG - chr1_3:34944227-34944246 Msa0116080:intron 10.0%
!!! TTTTTTTTAAATTTGTCATT+GGG - chr1_3:34944228-34944247 Msa0116080:intron 10.0%
!!! ATTTTAATTAATTAGTTTGA+TGG + chr1_3:34947737-34947756 None:intergenic 10.0%
!!! TTAAATATACTATTTTTTAC+AGG - chr1_3:34947805-34947824 Msa0116080:intron 10.0%
!! TCAAAAAAATTATTTAAACA+AGG + chr1_3:34950948-34950967 None:intergenic 10.0%
!!! TATAATGTTTTTTAATGTTT+TGG - chr1_3:34952844-34952863 Msa0116080:CDS 10.0%
!!! ATAATGTTTTTTAATGTTTT+GGG - chr1_3:34952845-34952864 Msa0116080:CDS 10.0%
!!! AAATTGTTTTAATAAGAATA+TGG + chr1_3:34953342-34953361 None:intergenic 10.0%
!!! TTCTTATTAAAACAATTTTA+AGG - chr1_3:34953344-34953363 Msa0116080:intron 10.0%
!! CTAATTTATATATCAATTTG+CGG - chr1_3:34943247-34943266 Msa0116080:intron 15.0%
!! AGAAGTAAAAAAAAAATATG+AGG + chr1_3:34945257-34945276 None:intergenic 15.0%
!! AAAAAGGAAAACATAAAAAA+GGG + chr1_3:34945933-34945952 None:intergenic 15.0%
!! AAAAAAGGAAAACATAAAAA+AGG + chr1_3:34945934-34945953 None:intergenic 15.0%
!! GAAAATGAATACAAAAAAAA+AGG + chr1_3:34945949-34945968 None:intergenic 15.0%
!!! TCATTATAAAAGTATTTTCT+TGG - chr1_3:34946710-34946729 Msa0116080:intron 15.0%
!! ATATATACGTTTAACTAATT+TGG - chr1_3:34948954-34948973 Msa0116080:intron 15.0%
!!! ATATAAGTTTTTTCAAATGA+TGG - chr1_3:34949423-34949442 Msa0116080:intron 15.0%
!! TCATTTATTTAACATATTTG+TGG + chr1_3:34949523-34949542 None:intergenic 15.0%
!! TATGTTAAATAAATGACAAA+TGG - chr1_3:34949527-34949546 Msa0116080:intron 15.0%
!!! ATTGAAGTATTTAAAACAAT+GGG + chr1_3:34950439-34950458 None:intergenic 15.0%
!!! AATTGAAGTATTTAAAACAA+TGG + chr1_3:34950440-34950459 None:intergenic 15.0%
!! TTATCTAATTGAATTGAAAT+CGG - chr1_3:34950656-34950675 Msa0116080:intron 15.0%
!!! AGGATGAATTATTAATTTTA+TGG - chr1_3:34950792-34950811 Msa0116080:intron 15.0%
!!! ATGAATTATTAATTTTATGG+AGG - chr1_3:34950795-34950814 Msa0116080:intron 15.0%
!! ATAGAAAAATTACCAATATA+CGG + chr1_3:34951041-34951060 None:intergenic 15.0%
!! AATTTAATACATTCTTCATA+GGG + chr1_3:34951068-34951087 None:intergenic 15.0%
!! AAATTTAATACATTCTTCAT+AGG + chr1_3:34951069-34951088 None:intergenic 15.0%
!! AAAATATGAAAAGTCTAAAT+TGG + chr1_3:34951153-34951172 None:intergenic 15.0%
!!! TAACAATTTTTCTTACAAAT+TGG - chr1_3:34951232-34951251 Msa0116080:CDS 15.0%
!!! GTTTAAGATAAAAAAAAATG+AGG - chr1_3:34952142-34952161 Msa0116080:intron 15.0%
!!! TAGTTATCACTAATTTTTAA+TGG + chr1_3:34952189-34952208 None:intergenic 15.0%
!!! TGAATTTGTTTTATCTTTAA+TGG - chr1_3:34953035-34953054 Msa0116080:intron 15.0%
!! AAGTTAACTATGATTAATAA+TGG - chr1_3:34953146-34953165 Msa0116080:intron 15.0%
!!! ATATAAGAAAAGTGATTTTT+TGG + chr1_3:34954298-34954317 None:intergenic 15.0%
!!! CTATTTTTTTTCTAAAAAGA+AGG - chr1_3:34954425-34954444 Msa0116080:CDS 15.0%
!!! GTATTTTCTTATCACTTTAA+CGG + chr1_3:34942445-34942464 None:intergenic 20.0%
!! GTTAAAGTGATAAGAAAATA+CGG - chr1_3:34942444-34942463 Msa0116080:intron 20.0%
!! AGAATAACCTTTAATATCAT+CGG + chr1_3:34943126-34943145 None:intergenic 20.0%
!!! TAAAGGTTATTCTTTAAGAA+CGG - chr1_3:34943133-34943152 Msa0116080:intron 20.0%
!!! TTGTAAAAGTATAATTGGTT+TGG - chr1_3:34943577-34943596 Msa0116080:intron 20.0%
!!! TGTAAAAGTATAATTGGTTT+GGG - chr1_3:34943578-34943597 Msa0116080:intron 20.0%
!! TTTGTATTCTACATTTGAAA+TGG - chr1_3:34943792-34943811 Msa0116080:intron 20.0%
!!! CTTATTTTTAATTTCCTACA+GGG + chr1_3:34943829-34943848 None:intergenic 20.0%
!!! TCTTATTTTTAATTTCCTAC+AGG + chr1_3:34943830-34943849 None:intergenic 20.0%
!! GTAGGAAATTAAAAATAAGA+CGG - chr1_3:34943830-34943849 Msa0116080:intron 20.0%
!!! AATTAATTATATGCTCCTTT+TGG - chr1_3:34944105-34944124 Msa0116080:intron 20.0%
!! AATCATGTAAATAATCCAAA+AGG + chr1_3:34944123-34944142 None:intergenic 20.0%
!!! TTGAATTTTATACACGTTTT+TGG - chr1_3:34945316-34945335 Msa0116080:intron 20.0%
!!! ATTAAGAAAAAGTTTCTAGA+TGG - chr1_3:34945494-34945513 Msa0116080:intron 20.0%
!! CCAAATATGTTTATAACTTT+GGG + chr1_3:34945657-34945676 None:intergenic 20.0%
!! TCCAAATATGTTTATAACTT+TGG + chr1_3:34945658-34945677 None:intergenic 20.0%
!! GTTATAAACATATTTGGATA+TGG - chr1_3:34945660-34945679 Msa0116080:intron 20.0%
!! AAAAGGAAAACATAAAAAAG+GGG + chr1_3:34945932-34945951 None:intergenic 20.0%
!! ATAAAAATTGCAGTAATTAC+AGG + chr1_3:34946061-34946080 None:intergenic 20.0%
!!! CATAAGCAATATATGTTTTA+GGG + chr1_3:34946348-34946367 None:intergenic 20.0%
!! TAATTGAGTATCATATTGAA+AGG - chr1_3:34946522-34946541 Msa0116080:intron 20.0%
!! TCAATTCAATTTACTTTAAC+AGG - chr1_3:34946623-34946642 Msa0116080:CDS 20.0%
!! TGAATGTATACTATATTACA+AGG - chr1_3:34946859-34946878 Msa0116080:CDS 20.0%
!!! AATTCATTTTACTAGATACT+TGG - chr1_3:34947647-34947666 Msa0116080:intron 20.0%
!! GTTCTAGTATATGTAATATT+AGG - chr1_3:34948233-34948252 Msa0116080:intron 20.0%
!!! AGATAGTATCAATTTTATCA+TGG + chr1_3:34948268-34948287 None:intergenic 20.0%
!!! CTTTATTTGTTACTTTTCTT+TGG - chr1_3:34948330-34948349 Msa0116080:intron 20.0%
!! AATAGGAGTTTATAATTAGT+TGG + chr1_3:34948530-34948549 None:intergenic 20.0%
!! ATATAACTCAAAGTACAAAT+AGG + chr1_3:34948547-34948566 None:intergenic 20.0%
!! CACTTAAAAATGTTAACATT+TGG + chr1_3:34949060-34949079 None:intergenic 20.0%
!!! CAAATGTTAACATTTTTAAG+TGG - chr1_3:34949058-34949077 Msa0116080:intron 20.0%
!!! CATTTTTAAGTGGAATATTA+CGG - chr1_3:34949068-34949087 Msa0116080:intron 20.0%
!!! CAACATCAAAAAAACTTTTA+TGG - chr1_3:34949670-34949689 Msa0116080:intron 20.0%
!!! AACAATTTTGTATTATACGA+TGG - chr1_3:34949698-34949717 Msa0116080:intron 20.0%
!! TTTGATCTGCTAAAAAATAA+GGG + chr1_3:34949899-34949918 None:intergenic 20.0%
!!! TTGAAGTATTTAAAACAATG+GGG + chr1_3:34950438-34950457 None:intergenic 20.0%
!! TAGATGATCATATTATATGT+AGG + chr1_3:34951008-34951027 None:intergenic 20.0%
!! ATTTAATACATTCTTCATAG+GGG + chr1_3:34951067-34951086 None:intergenic 20.0%
!! GTAAATTAGTAGCATTAATT+AGG - chr1_3:34951176-34951195 Msa0116080:CDS 20.0%
!!! AGCTTTTTAATAAACAAGTT+AGG + chr1_3:34951685-34951704 None:intergenic 20.0%
!! CTCATTAATTTAAATGAATC+AGG - chr1_3:34951703-34951722 Msa0116080:intron 20.0%
!! ATATAATTACACATATGTTC+TGG + chr1_3:34951765-34951784 None:intergenic 20.0%
!!! TTTTTTAGCAAATAATGATG+TGG + chr1_3:34951804-34951823 None:intergenic 20.0%
!!! TTATTTGCTAAAAAATCACA+TGG - chr1_3:34951809-34951828 Msa0116080:intron 20.0%
!!! TTTTTTAGCAAATTTTGATG+TGG - chr1_3:34952307-34952326 Msa0116080:CDS 20.0%
!!! ATTTTTCAATACCACAAATT+TGG - chr1_3:34952386-34952405 Msa0116080:CDS 20.0%
!!! TGCAATTGTTTTTACAATTT+AGG - chr1_3:34952410-34952429 Msa0116080:CDS 20.0%
!! ATGTTAAATTGTCAACAAAA+TGG + chr1_3:34952900-34952919 None:intergenic 20.0%
!! AAAACAAGTATACAACAATT+AGG + chr1_3:34953207-34953226 None:intergenic 20.0%
!!! ATTAAAACAATTTTAAGGTC+AGG - chr1_3:34953349-34953368 Msa0116080:intron 20.0%
!!! AAATTTGGTGAATTTGAATT+AGG + chr1_3:34953417-34953436 None:intergenic 20.0%
!! ATGATCTTATTCTTAGTATT+TGG - chr1_3:34953481-34953500 Msa0116080:CDS 20.0%
!! TGATCTTATTCTTAGTATTT+GGG - chr1_3:34953482-34953501 Msa0116080:CDS 20.0%
!!! TAATTGCAGTTTTAGAATTT+GGG - chr1_3:34954182-34954201 Msa0116080:intron 20.0%
!! TCAAAAAGATCCAAAATAAA+CGG + chr1_3:34954256-34954275 None:intergenic 20.0%
!! CAATACAAATAACAATCTAT+TGG + chr1_3:34954686-34954705 None:intergenic 20.0%
!! TCATATCAATAGATTGTTAT+TGG - chr1_3:34954752-34954771 Msa0116080:CDS 20.0%
!! AATCCATTTACAATTTACAT+TGG + chr1_3:34955098-34955117 None:intergenic 20.0%
!!! AAGGTTTTATGTTTTAGAGT+AGG + chr1_3:34942224-34942243 None:intergenic 25.0%
! TAGAAATACAAAAACCGAAA+AGG - chr1_3:34942632-34942651 Msa0116080:intron 25.0%
! TTCAATGATTTAATCTTCCT+AGG + chr1_3:34942729-34942748 None:intergenic 25.0%
! ATTGAATGAAGATTACTTGT+CGG - chr1_3:34942743-34942762 Msa0116080:intron 25.0%
!! GTTTTATCCGATGATATTAA+AGG - chr1_3:34943116-34943135 Msa0116080:intron 25.0%
! TTGTACCAATTGTTTAAACA+GGG + chr1_3:34943449-34943468 None:intergenic 25.0%
! TTATTGAACAAGACTTATTC+AGG - chr1_3:34943527-34943546 Msa0116080:intron 25.0%
! TATTGAACAAGACTTATTCA+GGG - chr1_3:34943528-34943547 Msa0116080:intron 25.0%
!! GTTTTTATTGCGTCTAATTA+AGG - chr1_3:34943631-34943650 Msa0116080:intron 25.0%
! AATACAAAAAATCACAGGAA+TGG + chr1_3:34943780-34943799 None:intergenic 25.0%
! TGTAGAATACAAAAAATCAC+AGG + chr1_3:34943785-34943804 None:intergenic 25.0%
! AAGTACTTTCAGCATATATT+TGG + chr1_3:34943886-34943905 None:intergenic 25.0%
! TATTAAAAATAGTTCGAAGC+AGG + chr1_3:34944151-34944170 None:intergenic 25.0%
!!! TTCTATTTTTAGCTCAGAAA+GGG + chr1_3:34944273-34944292 None:intergenic 25.0%
! AAGATAAACTCAAACTCAAT+TGG + chr1_3:34944527-34944546 None:intergenic 25.0%
! ACAGTATAAAATGTTATCAC+TGG + chr1_3:34944909-34944928 None:intergenic 25.0%
! AAAAAAAAATATGAGGATCG+AGG + chr1_3:34945250-34945269 None:intergenic 25.0%
!!! TTATACACGTTTTTGGAATT+TGG - chr1_3:34945323-34945342 Msa0116080:intron 25.0%
! TTCTATTAATACCAGAAAGA+TGG + chr1_3:34945354-34945373 None:intergenic 25.0%
!!! TTACTCTTCCAACTATTTTT+GGG - chr1_3:34945458-34945477 Msa0116080:intron 25.0%
! TATGAAGATATATCAGTACA+CGG - chr1_3:34945531-34945550 Msa0116080:intron 25.0%
!!! TTGTCTAAGTTATTTTGTCT+TGG - chr1_3:34945604-34945623 Msa0116080:intron 25.0%
! CCCAAAGTTATAAACATATT+TGG - chr1_3:34945654-34945673 Msa0116080:intron 25.0%
!!! AGGTTTTGAAATTGAAAGAT+TGG - chr1_3:34946173-34946192 Msa0116080:intron 25.0%
! CTTTCTTCAAATAAGTTAGA+AGG + chr1_3:34946202-34946221 None:intergenic 25.0%
! GGATCTGTATATTCTTTATA+GGG + chr1_3:34946262-34946281 None:intergenic 25.0%
! AGGATCTGTATATTCTTTAT+AGG + chr1_3:34946263-34946282 None:intergenic 25.0%
!! CCATAAGCAATATATGTTTT+AGG + chr1_3:34946349-34946368 None:intergenic 25.0%
! CCTAAAACATATATTGCTTA+TGG - chr1_3:34946346-34946365 Msa0116080:intron 25.0%
! TGAAATATGATTATTGCCTT+TGG - chr1_3:34946736-34946755 Msa0116080:intron 25.0%
! ATTACAACTTTCTAATCCAA+AGG + chr1_3:34946755-34946774 None:intergenic 25.0%
! TTTAAATATTCCTCCAACTT+AGG + chr1_3:34947183-34947202 None:intergenic 25.0%
!! ACTAATTTTACCTGCTTTAA+AGG + chr1_3:34947243-34947262 None:intergenic 25.0%
! TTAATGACCGAAGTTAAAAA+GGG + chr1_3:34947297-34947316 None:intergenic 25.0%
! ATTAATGACCGAAGTTAAAA+AGG + chr1_3:34947298-34947317 None:intergenic 25.0%
!!! ATTTTGACTAATGGTATGTT+TGG - chr1_3:34947358-34947377 Msa0116080:intron 25.0%
!!! TTACATGTTGTTTTAACTTG+AGG - chr1_3:34947894-34947913 Msa0116080:intron 25.0%
!!! TACATGTTGTTTTAACTTGA+GGG - chr1_3:34947895-34947914 Msa0116080:intron 25.0%
! TATTACATATACTAGAACCT+AGG + chr1_3:34948231-34948250 None:intergenic 25.0%
! CTAGTATATGTAATATTAGG+AGG - chr1_3:34948236-34948255 Msa0116080:intron 25.0%
! AATGTCAAACTAAACTATGA+AGG + chr1_3:34948402-34948421 None:intergenic 25.0%
!!! ACCTTTACTCTTTTAAAAAG+AGG - chr1_3:34948461-34948480 Msa0116080:intron 25.0%
! TATATTTCTTCACAAGTTTG+AGG + chr1_3:34948939-34948958 None:intergenic 25.0%
!! CACAATTTTGTAAAAGAATG+TGG + chr1_3:34949115-34949134 None:intergenic 25.0%
! AAATTGCATAGATATGATGT+TGG - chr1_3:34949576-34949595 Msa0116080:intron 25.0%
!! ATTTTGTATTATACGATGGT+TGG - chr1_3:34949702-34949721 Msa0116080:intron 25.0%
! TGATTGATTGTATTGTTCAA+GGG + chr1_3:34949848-34949867 None:intergenic 25.0%
! ATGATTGATTGTATTGTTCA+AGG + chr1_3:34949849-34949868 None:intergenic 25.0%
! GTTTGATCTGCTAAAAAATA+AGG + chr1_3:34949900-34949919 None:intergenic 25.0%
!! TTTCTTTGTTTGATCAATGA+TGG - chr1_3:34949955-34949974 Msa0116080:intron 25.0%
! AGATTAAAATTACCTTCCAT+TGG - chr1_3:34950152-34950171 Msa0116080:intron 25.0%
! TTGCAATTTCCAAACATTTA+GGG + chr1_3:34950238-34950257 None:intergenic 25.0%
! TTTGCAATTTCCAAACATTT+AGG + chr1_3:34950239-34950258 None:intergenic 25.0%
! TTTGTAATTTCGGTACAATT+TGG - chr1_3:34950365-34950384 Msa0116080:CDS 25.0%
! TTGTAATTTCGGTACAATTT+GGG - chr1_3:34950366-34950385 Msa0116080:CDS 25.0%
!! TTTCAAATAGTTCCTTTTCT+TGG + chr1_3:34950493-34950512 None:intergenic 25.0%
! TACATACACAAAATCATTCA+TGG + chr1_3:34950523-34950542 None:intergenic 25.0%
!! GAATGATTTTGTGTATGTAA+TGG - chr1_3:34950524-34950543 Msa0116080:intron 25.0%
!!! TTTCGAGTATACTTTAAGAT+TGG - chr1_3:34950855-34950874 Msa0116080:intron 25.0%
!!! TTCGAGTATACTTTAAGATT+GGG - chr1_3:34950856-34950875 Msa0116080:intron 25.0%
!!! TGTTTTATTTTTCGGACTTT+TGG - chr1_3:34950880-34950899 Msa0116080:intron 25.0%
!!! TGGTTTTATGTTATGACTTT+TGG - chr1_3:34950900-34950919 Msa0116080:intron 25.0%
! TTGGATACACTATTATCATA+GGG + chr1_3:34951134-34951153 None:intergenic 25.0%
! ATTGGATACACTATTATCAT+AGG + chr1_3:34951135-34951154 None:intergenic 25.0%
!!! CAAATTGGTGTTCATAATTT+TGG - chr1_3:34951247-34951266 Msa0116080:CDS 25.0%
! TACTTGTATCTATGAAACAT+AGG + chr1_3:34951370-34951389 None:intergenic 25.0%
! TTCATAGATACAAGTATAGT+AGG - chr1_3:34951374-34951393 Msa0116080:intron 25.0%
! TCATAGATACAAGTATAGTA+GGG - chr1_3:34951375-34951394 Msa0116080:intron 25.0%
! AATTAAAACAGTTAGCACAA+CGG + chr1_3:34951894-34951913 None:intergenic 25.0%
!! TTGTGGTATTGAAAAATTGA+AGG + chr1_3:34952383-34952402 None:intergenic 25.0%
!!! TCAAAAGTTTTGTAACTCAT+TGG + chr1_3:34952440-34952459 None:intergenic 25.0%
!!! TCAAAAGTTTTGTAACTCAT+TGG + chr1_3:34952440-34952459 None:intergenic 25.0%
!! ACTTTCTTATTTCAATTCCA+AGG - chr1_3:34952543-34952562 Msa0116080:CDS 25.0%
! AATATTGAAACATGATATGC+AGG - chr1_3:34952642-34952661 Msa0116080:CDS 25.0%
! ATATTGAAACATGATATGCA+GGG - chr1_3:34952643-34952662 Msa0116080:CDS 25.0%
!!! ACAATTTAACATTGACTTGT+AGG - chr1_3:34952908-34952927 Msa0116080:CDS 25.0%
! TATGTAATACCTTCAGATTT+CGG + chr1_3:34953006-34953025 None:intergenic 25.0%
! AAATGCATATGTTGAGTTTA+TGG - chr1_3:34953085-34953104 Msa0116080:intron 25.0%
! AATGCATATGTTGAGTTTAT+GGG - chr1_3:34953086-34953105 Msa0116080:intron 25.0%
!!! TATGGGTTTTAGATAAAAGA+TGG - chr1_3:34953103-34953122 Msa0116080:CDS 25.0%
! TTACGTAAAATATTATTCCG+AGG - chr1_3:34953287-34953306 Msa0116080:intron 25.0%
! ATATTATTCCGAGGTAAAAA+AGG - chr1_3:34953296-34953315 Msa0116080:intron 25.0%
! ACCAAATTTGTATTGAGATT+TGG - chr1_3:34953428-34953447 Msa0116080:intron 25.0%
! AGGACATATTATATGTAATG+TGG - chr1_3:34953569-34953588 Msa0116080:intron 25.0%
! GGACATATTATATGTAATGT+GGG - chr1_3:34953570-34953589 Msa0116080:intron 25.0%
! TTAAAATAGACAATCCCAAA+AGG - chr1_3:34953753-34953772 Msa0116080:intron 25.0%
!! TCAAGTAAGTTATTCCTTTT+GGG + chr1_3:34953770-34953789 None:intergenic 25.0%
!! TTCAAGTAAGTTATTCCTTT+TGG + chr1_3:34953771-34953790 None:intergenic 25.0%
!!! CAAATTCTAAAACTGCAATT+AGG + chr1_3:34954183-34954202 None:intergenic 25.0%
!!! CTAATTGCAGTTTTAGAATT+TGG - chr1_3:34954181-34954200 Msa0116080:intron 25.0%
! CAAAAAGATCCAAAATAAAC+GGG + chr1_3:34954255-34954274 None:intergenic 25.0%
! TCAAAATGAAAAACTATTCC+CGG - chr1_3:34954387-34954406 Msa0116080:CDS 25.0%
! TAACAATCTATTGATATGAC+AGG + chr1_3:34954751-34954770 None:intergenic 25.0%
! TAACCAAAGAAGCAAAAATA+AGG + chr1_3:34954807-34954826 None:intergenic 25.0%
!! ATTTTTGCTTCTTTGGTTAA+AGG - chr1_3:34954808-34954827 Msa0116080:CDS 25.0%
! AAAAAATATGCACAAAGACA+AGG + chr1_3:34954990-34955009 None:intergenic 25.0%
! GTTCCAATGTAAATTGTAAA+TGG - chr1_3:34955092-34955111 Msa0116080:CDS 25.0%
!!! AATCCATATTTTGTTATGTC+TGG - chr1_3:34955211-34955230 Msa0116080:five_prime_UTR 25.0%
! TTTAGAGTAGGAAGAAAATG+CGG + chr1_3:34942212-34942231 None:intergenic 30.0%
AAAAGTTCAAATGGAGAGAA+AGG + chr1_3:34942243-34942262 None:intergenic 30.0%
TTTAACGGAAGAAGAATCTT+CGG + chr1_3:34942430-34942449 None:intergenic 30.0%
TGATAAGAAAATACGGTAGA+AGG - chr1_3:34942451-34942470 Msa0116080:intron 30.0%
ACCGAAAAGGAAAATAAAAC+AGG - chr1_3:34942645-34942664 Msa0116080:intron 30.0%
!!! CCCTGTTTTATTTTCCTTTT+CGG + chr1_3:34942649-34942668 None:intergenic 30.0%
CCGAAAAGGAAAATAAAACA+GGG - chr1_3:34942646-34942665 Msa0116080:intron 30.0%
CGAAAAGGAAAATAAAACAG+GGG - chr1_3:34942647-34942666 Msa0116080:intron 30.0%
TGAAAATGAAGCTGAAAAAG+AGG - chr1_3:34942929-34942948 Msa0116080:intron 30.0%
GAAAATGAAGCTGAAAAAGA+GGG - chr1_3:34942930-34942949 Msa0116080:intron 30.0%
AAAGAGGAAAAGAAAAAACC+TGG - chr1_3:34942966-34942985 Msa0116080:intron 30.0%
AAAACCTGGTAGAAAAAAGA+AGG - chr1_3:34942980-34942999 Msa0116080:intron 30.0%
AATGATGAAGATGAACAAGA+TGG - chr1_3:34943026-34943045 Msa0116080:intron 30.0%
ATGATGAAGATGAACAAGAT+GGG - chr1_3:34943027-34943046 Msa0116080:intron 30.0%
GTTCAACAAGAGAAATTCTA+AGG - chr1_3:34943205-34943224 Msa0116080:intron 30.0%
TATGTTTACATGCTTGAGTT+TGG - chr1_3:34943273-34943292 Msa0116080:intron 30.0%
TAATGTTTCTCAATCAACAG+TGG - chr1_3:34943327-34943346 Msa0116080:intron 30.0%
TCAGATGTACAAAATGCAAA+CGG - chr1_3:34943408-34943427 Msa0116080:CDS 30.0%
GTTGTACCAATTGTTTAAAC+AGG + chr1_3:34943450-34943469 None:intergenic 30.0%
ATTGAACAAGACTTATTCAG+GGG - chr1_3:34943529-34943548 Msa0116080:intron 30.0%
! TCTTCCATATTTAAGACGTT+TGG - chr1_3:34943905-34943924 Msa0116080:intron 30.0%
TCATCCAAACGTCTTAAATA+TGG + chr1_3:34943912-34943931 None:intergenic 30.0%
AAGCAACTCACATCAATAAA+AGG + chr1_3:34944050-34944069 None:intergenic 30.0%
TCATTGGGATGAAAATTACA+GGG - chr1_3:34944243-34944262 Msa0116080:intron 30.0%
!!! CTTCTATTTTTAGCTCAGAA+AGG + chr1_3:34944274-34944293 None:intergenic 30.0%
!! CAAAAGAGACTTTTGATAGT+TGG - chr1_3:34944807-34944826 Msa0116080:intron 30.0%
AGGATATACACAATAACACA+AGG - chr1_3:34944861-34944880 Msa0116080:intron 30.0%
TATACACAATAACACAAGGA+AGG - chr1_3:34944865-34944884 Msa0116080:intron 30.0%
! ATAACATTTTATACTGTCCC+AGG - chr1_3:34944912-34944931 Msa0116080:intron 30.0%
! TAACATTTTATACTGTCCCA+GGG - chr1_3:34944913-34944932 Msa0116080:intron 30.0%
AGTACATTGCTAACAATTAC+AGG + chr1_3:34944998-34945017 None:intergenic 30.0%
AATGTACTTGAATGTACATC+TGG - chr1_3:34945010-34945029 Msa0116080:intron 30.0%
! AAGCTATTGATTGCTTAGAT+TGG - chr1_3:34945113-34945132 Msa0116080:intron 30.0%
ATTTGGTATTTCCATCTTTC+TGG - chr1_3:34945340-34945359 Msa0116080:intron 30.0%
TGAGTGTCTTGAAAAGAATT+TGG - chr1_3:34945426-34945445 Msa0116080:intron 30.0%
AAATAGTTGGAAGAGTAACT+TGG + chr1_3:34945456-34945475 None:intergenic 30.0%
! GTTACTCTTCCAACTATTTT+TGG - chr1_3:34945457-34945476 Msa0116080:intron 30.0%
TAGATCAAGCAAAAAGAACA+GGG + chr1_3:34945806-34945825 None:intergenic 30.0%
!! AGGGTAACAAAAAAGTATCT+GGG + chr1_3:34945829-34945848 None:intergenic 30.0%
!! AAGGGTAACAAAAAAGTATC+TGG + chr1_3:34945830-34945849 None:intergenic 30.0%
TGGTCTGTTAAACTATTGAA+AGG + chr1_3:34945971-34945990 None:intergenic 30.0%
TAAGCACGTAGAATTTAATC+TGG + chr1_3:34945991-34946010 None:intergenic 30.0%
TCTTTCAATTTCAAAACCTG+AGG + chr1_3:34946172-34946191 None:intergenic 30.0%
TCTTCAAATAAGTTAGAAGG+AGG + chr1_3:34946199-34946218 None:intergenic 30.0%
TGTATATTCTTTATAGGGCA+AGG + chr1_3:34946257-34946276 None:intergenic 30.0%
GAATATACAGATCCTTTCAA+AGG - chr1_3:34946268-34946287 Msa0116080:intron 30.0%
! ATGTATATGCCTGAACTTTT+TGG - chr1_3:34946556-34946575 Msa0116080:intron 30.0%
TACTAGAAACCAAAACACAA+AGG + chr1_3:34946656-34946675 None:intergenic 30.0%
CCTAAAAAGGCAATTACAAA+AGG + chr1_3:34946900-34946919 None:intergenic 30.0%
! CCTTTTGTAATTGCCTTTTT+AGG - chr1_3:34946897-34946916 Msa0116080:CDS 30.0%
TGAAGTGAAATTGAAATCTG+AGG - chr1_3:34946942-34946961 Msa0116080:intron 30.0%
GAAGTGAAATTGAAATCTGA+GGG - chr1_3:34946943-34946962 Msa0116080:intron 30.0%
! CTTTTGTGTCAGTTTCTTAA+TGG + chr1_3:34946977-34946996 None:intergenic 30.0%
TGAATTATCAAGCATGATAG+TGG + chr1_3:34947052-34947071 None:intergenic 30.0%
!! TTTTTCGTCTGAAGCATTTA+TGG + chr1_3:34947082-34947101 None:intergenic 30.0%
! ATAATTTTCTATGATCCGCT+AGG - chr1_3:34947267-34947286 Msa0116080:intron 30.0%
TAATGACCGAAGTTAAAAAG+GGG + chr1_3:34947296-34947315 None:intergenic 30.0%
TCGGTCATTAATTGTATGTT+TGG - chr1_3:34947306-34947325 Msa0116080:intron 30.0%
!! TAATTGTATGTTTGGTTCTG+TGG - chr1_3:34947314-34947333 Msa0116080:intron 30.0%
!!! AGTGAATCGATTTTGACTAA+TGG - chr1_3:34947349-34947368 Msa0116080:intron 30.0%
CAAGTAGGATAAAGAGAAAT+AGG - chr1_3:34947388-34947407 Msa0116080:intron 30.0%
! GATTGATAACTTCTCTTGTT+TGG - chr1_3:34947431-34947450 Msa0116080:intron 30.0%
! ATAACTTCTCTTGTTTGGTT+AGG - chr1_3:34947436-34947455 Msa0116080:intron 30.0%
!! TACTTTGCTTTAGAGTTCAA+AGG + chr1_3:34947678-34947697 None:intergenic 30.0%
!! TGAACTCTAAAGCAAAGTAT+AGG - chr1_3:34947679-34947698 Msa0116080:intron 30.0%
!! AGGGCATTATTGTCTTTTTA+TGG - chr1_3:34947914-34947933 Msa0116080:intron 30.0%
!! AGCAGATTTGAAGTATTGTT+TGG + chr1_3:34948011-34948030 None:intergenic 30.0%
! ATAAAGTAAAAGCATAAGCC+AGG + chr1_3:34948316-34948335 None:intergenic 30.0%
! ACATTGCAATAGCTTCTTTT+TGG - chr1_3:34948376-34948395 Msa0116080:intron 30.0%
!! GCCTCTTTTTAAAAGAGTAA+AGG + chr1_3:34948465-34948484 None:intergenic 30.0%
GTTGAAGATCACATAAATTG+TGG - chr1_3:34948635-34948654 Msa0116080:intron 30.0%
TCTGAAGATCACATAAATTG+TGG - chr1_3:34948660-34948679 Msa0116080:intron 30.0%
ATAGAAGTGAAAACAAGAGA+GGG + chr1_3:34948844-34948863 None:intergenic 30.0%
AATAGAAGTGAAAACAAGAG+AGG + chr1_3:34948845-34948864 None:intergenic 30.0%
! CAAGTGTAGATACTTTGAAA+TGG - chr1_3:34948885-34948904 Msa0116080:intron 30.0%
TTGGTAAACAGCTACATAAT+AGG - chr1_3:34948973-34948992 Msa0116080:intron 30.0%
!! TTTTAAGTGGAATATTACGG+AGG - chr1_3:34949071-34949090 Msa0116080:intron 30.0%
GATTTCCTTTAATGCAACAA+AGG - chr1_3:34949134-34949153 Msa0116080:intron 30.0%
GTTCTAATTTCATGTCAAGA+TGG + chr1_3:34949219-34949238 None:intergenic 30.0%
!!! AATGAGTTTTGGAGGATTAT+AGG - chr1_3:34949269-34949288 Msa0116080:intron 30.0%
!!! ATGAGTTTTGGAGGATTATA+GGG - chr1_3:34949270-34949289 Msa0116080:intron 30.0%
!!! CTATCTATGTTTTTGGCATA+TGG - chr1_3:34949346-34949365 Msa0116080:intron 30.0%
TCGATGATCAACAAATTACA+AGG - chr1_3:34949494-34949513 Msa0116080:intron 30.0%
! TTGATTCGCTAAAAGATTAG+TGG - chr1_3:34949628-34949647 Msa0116080:intron 30.0%
ATCTGCTAAAAAATAAGGGA+CGG + chr1_3:34949895-34949914 None:intergenic 30.0%
ATCAAACAAAGAAATACGAC+TGG + chr1_3:34949949-34949968 None:intergenic 30.0%
! CTTTTGTAAGTGAGAAGAAT+TGG - chr1_3:34950098-34950117 Msa0116080:intron 30.0%
GTTCAGAAAATTACTGACAA+AGG + chr1_3:34950275-34950294 None:intergenic 30.0%
! TCGAATGTGTTTTTCTTCAT+AGG + chr1_3:34950306-34950325 None:intergenic 30.0%
ACCAACAAAACAAACATTTG+TGG - chr1_3:34950337-34950356 Msa0116080:CDS 30.0%
!!! ACCACAAATGTTTGTTTTGT+TGG + chr1_3:34950341-34950360 None:intergenic 30.0%
! TGTGGTGATGTTTGTAATTT+CGG - chr1_3:34950355-34950374 Msa0116080:CDS 30.0%
! TTTAGGTTTACACCAAGAAA+AGG - chr1_3:34950478-34950497 Msa0116080:CDS 30.0%
AAGTGGAGAAGAAATCAAAT+GGG - chr1_3:34950566-34950585 Msa0116080:intron 30.0%
!! TCGAGTATACTTTAAGATTG+GGG - chr1_3:34950857-34950876 Msa0116080:intron 30.0%
!!! GATTGGGGTGTTTTATTTTT+CGG - chr1_3:34950872-34950891 Msa0116080:intron 30.0%
TAACTGATTAATACTCCTTC+CGG - chr1_3:34950981-34951000 Msa0116080:intron 30.0%
GATCATATTATATGTAGGAC+CGG + chr1_3:34951003-34951022 None:intergenic 30.0%
!! TGTTCATAATTTTGGAGAGA+GGG - chr1_3:34951255-34951274 Msa0116080:CDS 30.0%
CAATGAGGATTTCATATACA+TGG + chr1_3:34951310-34951329 None:intergenic 30.0%
GCAATTATATGCAAACAATG+AGG + chr1_3:34951325-34951344 None:intergenic 30.0%
CATAGATACAAGTATAGTAG+GGG - chr1_3:34951376-34951395 Msa0116080:intron 30.0%
TACAATAGCAAATCTAGATC+CGG - chr1_3:34951596-34951615 Msa0116080:intron 30.0%
! GGTTTTCAAAGATTCAAGTA+AGG + chr1_3:34951991-34952010 None:intergenic 30.0%
AAGGCTTATTGACAGTTAAA+CGG - chr1_3:34952086-34952105 Msa0116080:intron 30.0%
AACAATTGCAACCAAATTTG+TGG + chr1_3:34952400-34952419 None:intergenic 30.0%
!! GTACTTTTGGGTATACTTTT+GGG - chr1_3:34952573-34952592 Msa0116080:CDS 30.0%
ATTCCTTACCCATATTAAGA+GGG + chr1_3:34952604-34952623 None:intergenic 30.0%
AATTCCTTACCCATATTAAG+AGG + chr1_3:34952605-34952624 None:intergenic 30.0%
GAATTGCATTATAGATGACT+TGG - chr1_3:34952665-34952684 Msa0116080:CDS 30.0%
!! TCAAATAAAAGTGCTGATCA+TGG + chr1_3:34952776-34952795 None:intergenic 30.0%
AACTCAACATATGCATTTCT+TGG + chr1_3:34953083-34953102 None:intergenic 30.0%
TATCTTGAGAGAACAATGTT+TGG - chr1_3:34953176-34953195 Msa0116080:intron 30.0%
CAAGTATACAACAATTAGGA+CGG + chr1_3:34953203-34953222 None:intergenic 30.0%
!!! CAATTTTAAGGTCAGGAAAA+TGG - chr1_3:34953356-34953375 Msa0116080:intron 30.0%
GCCAAATCTCAATACAAATT+TGG + chr1_3:34953432-34953451 None:intergenic 30.0%
TGCAACTTATAAACATGTGT+AGG - chr1_3:34953549-34953568 Msa0116080:CDS 30.0%
CAGAATCAAATCAACAAAAG+TGG + chr1_3:34954079-34954098 None:intergenic 30.0%
CTTGTCCAATATTGAGATAT+TGG - chr1_3:34954110-34954129 Msa0116080:intron 30.0%
GACATCCAATATCTCAATAT+TGG + chr1_3:34954118-34954137 None:intergenic 30.0%
AAAGAAGCTAATGACGAAAT+AGG + chr1_3:34954140-34954159 None:intergenic 30.0%
CTTGATATAGCAGAACAATT+TGG - chr1_3:34954205-34954224 Msa0116080:CDS 30.0%
! GGGAATAGTTTTTCATTTTG+AGG + chr1_3:34954388-34954407 None:intergenic 30.0%
! ATAGATTTTGCAAAAGCTAC+CGG + chr1_3:34954409-34954428 None:intergenic 30.0%
!!! CTTCCTTATTTTTGCTTCTT+TGG - chr1_3:34954801-34954820 Msa0116080:CDS 30.0%
TATATATGCTATGCTTGATC+TGG - chr1_3:34954844-34954863 Msa0116080:CDS 30.0%
TACAATTTACATTGGAACCT+TGG + chr1_3:34955090-34955109 None:intergenic 30.0%
TTTCAGAGAATGAATCTAGT+TGG - chr1_3:34955116-34955135 Msa0116080:CDS 30.0%
TTCAGAGAATGAATCTAGTT+GGG - chr1_3:34955117-34955136 Msa0116080:CDS 30.0%
!!! ATTTTTTGAAGCGTGTAGTT+TGG - chr1_3:34955147-34955166 Msa0116080:exon 30.0%
!! TCCATTTGAACTTTTTCCCA+TGG - chr1_3:34942248-34942267 Msa0116080:intron 35.0%
!! ATTTGAACTTTTTCCCATGG+CGG - chr1_3:34942251-34942270 Msa0116080:intron 35.0%
!!! ATAGCTTGTTTTTCACGATC+AGG + chr1_3:34942345-34942364 None:intergenic 35.0%
ACAAAGGAAGAAACGAGTAA+AGG - chr1_3:34942546-34942565 Msa0116080:CDS 35.0%
ATGAACGGAAATAGAGTTTC+CGG + chr1_3:34942589-34942608 None:intergenic 35.0%
AAGGAAAATAAAACAGGGGA+AGG - chr1_3:34942651-34942670 Msa0116080:intron 35.0%
TGAAGATTACTTGTCGGATT+TGG - chr1_3:34942749-34942768 Msa0116080:intron 35.0%
AGGAAGAAGAAGGTCATAAT+CGG - chr1_3:34942804-34942823 Msa0116080:intron 35.0%
AGTGATGAAGCTGAACATAA+AGG - chr1_3:34942840-34942859 Msa0116080:intron 35.0%
GTGATGAAGCTGAACATAAA+GGG - chr1_3:34942841-34942860 Msa0116080:intron 35.0%
TGATGAAGCTGAACATAAAG+GGG - chr1_3:34942842-34942861 Msa0116080:intron 35.0%
!! AGGAAGGAAATTTCTAGTTC+TGG - chr1_3:34942903-34942922 Msa0116080:intron 35.0%
GGGAGTAAATGTCAAAAAAG+AGG - chr1_3:34942950-34942969 Msa0116080:intron 35.0%
!!! CTTACCTTCTTTTTTCTACC+AGG + chr1_3:34942987-34943006 None:intergenic 35.0%
TGATGAAGATGAACAAGATG+GGG - chr1_3:34943028-34943047 Msa0116080:intron 35.0%
TGGTAGAACTGTTAAGATTG+AGG - chr1_3:34943055-34943074 Msa0116080:intron 35.0%
ACTGACCAGTGAAAAGAATT+TGG - chr1_3:34943085-34943104 Msa0116080:intron 35.0%
! ACTCTCCAAATTCTTTTCAC+TGG + chr1_3:34943093-34943112 None:intergenic 35.0%
ATGCATTGAACAGCATCAAA+CGG - chr1_3:34943175-34943194 Msa0116080:intron 35.0%
! TGTCATTTCTCTGACATTGA+TGG + chr1_3:34943376-34943395 None:intergenic 35.0%
TCAATGTCAGAGAAATGACA+AGG - chr1_3:34943376-34943395 Msa0116080:CDS 35.0%
CAATGTCAGAGAAATGACAA+GGG - chr1_3:34943377-34943396 Msa0116080:CDS 35.0%
GCATACCCTGTTTAAACAAT+TGG - chr1_3:34943441-34943460 Msa0116080:CDS 35.0%
!! TAACTTGCTTCATCGTTTGT+TGG - chr1_3:34943496-34943515 Msa0116080:intron 35.0%
!! AGTATAATTGGTTTGGGTTG+TGG - chr1_3:34943584-34943603 Msa0116080:intron 35.0%
GACGCAATAAAAACATACAC+TGG + chr1_3:34943625-34943644 None:intergenic 35.0%
!! ATTTTCTCCTCTTTCAAGTG+AGG + chr1_3:34943660-34943679 None:intergenic 35.0%
GAATCAAAACCATGAAGAGA+TGG + chr1_3:34944014-34944033 None:intergenic 35.0%
GTCATTGGGATGAAAATTAC+AGG - chr1_3:34944242-34944261 Msa0116080:intron 35.0%
AGTTGCAGATATCCCTAAAA+AGG - chr1_3:34944292-34944311 Msa0116080:intron 35.0%
! AGTTTGAGTTTATCTTCCGA+GGG - chr1_3:34944531-34944550 Msa0116080:intron 35.0%
AGTAACTCAGAGATGCAATT+TGG + chr1_3:34944743-34944762 None:intergenic 35.0%
! GTTCTTGTTTAAAGCCTGTT+AGG - chr1_3:34944831-34944850 Msa0116080:intron 35.0%
ATATCCTCTTCATTCCTAAC+AGG + chr1_3:34944848-34944867 None:intergenic 35.0%
TTATGTAGATTTACAGCCCT+GGG + chr1_3:34944932-34944951 None:intergenic 35.0%
ATTATGTAGATTTACAGCCC+TGG + chr1_3:34944933-34944952 None:intergenic 35.0%
GGCTGTAAATCTACATAATG+AGG - chr1_3:34944934-34944953 Msa0116080:intron 35.0%
! AATGTACATCTGGTTTAAGC+TGG - chr1_3:34945020-34945039 Msa0116080:intron 35.0%
! ATGTACATCTGGTTTAAGCT+GGG - chr1_3:34945021-34945040 Msa0116080:intron 35.0%
! TACCAAGCACAAAACACTTT+TGG - chr1_3:34945084-34945103 Msa0116080:intron 35.0%
!!! ATCCAAAAGTGTTTTGTGCT+TGG + chr1_3:34945089-34945108 None:intergenic 35.0%
GAAAAGTTCAAAACAAGCTC+AGG + chr1_3:34945195-34945214 None:intergenic 35.0%
AGGATCGAGGATTATGAAAA+TGG + chr1_3:34945237-34945256 None:intergenic 35.0%
!! CTTTTCAAGACACTCATGAA+AGG + chr1_3:34945422-34945441 None:intergenic 35.0%
ACTGTCAACCCAAAAATAGT+TGG + chr1_3:34945469-34945488 None:intergenic 35.0%
CTGATATATCTTCATAACCC+AGG + chr1_3:34945527-34945546 None:intergenic 35.0%
ATGTATATCAGCACACAGAT+AGG + chr1_3:34945564-34945583 None:intergenic 35.0%
!! AGTTATTTTGTCTTGGTCCT+TGG - chr1_3:34945611-34945630 Msa0116080:intron 35.0%
CTCATCTTTCTCTTAGTCAT+AGG - chr1_3:34945718-34945737 Msa0116080:intron 35.0%
GTAGATCAAGCAAAAAGAAC+AGG + chr1_3:34945807-34945826 None:intergenic 35.0%
TTAGAGGATGCACAAGAAAA+AGG + chr1_3:34945890-34945909 None:intergenic 35.0%
AACATCAGCTAGATGATTAG+AGG + chr1_3:34945906-34945925 None:intergenic 35.0%
AGATAGACATGTCAGGTAAA+AGG + chr1_3:34946034-34946053 None:intergenic 35.0%
! TGAGTTGTTGATTGAATGCA+GGG - chr1_3:34946082-34946101 Msa0116080:intron 35.0%
AATGTGCACCAATTCTTTAC+TGG - chr1_3:34946112-34946131 Msa0116080:intron 35.0%
ATGTGCACCAATTCTTTACT+GGG - chr1_3:34946113-34946132 Msa0116080:intron 35.0%
TTGTGTACCCAGTAAAGAAT+TGG + chr1_3:34946123-34946142 None:intergenic 35.0%
TTCTTTACTGGGTACACAAA+AGG - chr1_3:34946124-34946143 Msa0116080:intron 35.0%
AGGTTAAGAACACCTTTGAA+AGG + chr1_3:34946283-34946302 None:intergenic 35.0%
TATTGCTTATGGATTTGAGC+AGG - chr1_3:34946357-34946376 Msa0116080:intron 35.0%
! GTATCATATTGAAAGGTGCA+TGG - chr1_3:34946529-34946548 Msa0116080:intron 35.0%
!! GGTTACTTTCCTTTGTGTTT+TGG - chr1_3:34946644-34946663 Msa0116080:CDS 35.0%
GTCAGCACATTTACCTAAAA+AGG + chr1_3:34946913-34946932 None:intergenic 35.0%
AAAAAATTGCGTTCCAGTCA+TGG - chr1_3:34947098-34947117 Msa0116080:intron 35.0%
ATGTTTGGTAGAGTACAAGT+AGG - chr1_3:34947373-34947392 Msa0116080:intron 35.0%
AGGAGAGAATTTGTAAAGAG+AGG - chr1_3:34947456-34947475 Msa0116080:intron 35.0%
GAGAGAAATGTAAAAGCTGT+GGG + chr1_3:34947498-34947517 None:intergenic 35.0%
TCTCACTTTCTCATCATAAG+TGG + chr1_3:34947520-34947539 None:intergenic 35.0%
TTTGGTTGTGAGAAAATGAG+AGG + chr1_3:34948053-34948072 None:intergenic 35.0%
! CATTTTCTCACAACCAAACA+TGG - chr1_3:34948055-34948074 Msa0116080:intron 35.0%
ACTCACTATTACACCATGTT+TGG + chr1_3:34948071-34948090 None:intergenic 35.0%
AATCGTAAGCTACAAATCCT+AGG - chr1_3:34948158-34948177 Msa0116080:intron 35.0%
TCCTAGGTTCAAGTAGAATT+TGG - chr1_3:34948174-34948193 Msa0116080:intron 35.0%
TCCAAATTCTACTTGAACCT+AGG + chr1_3:34948178-34948197 None:intergenic 35.0%
TAGGTTCAAGTAGAATTTGG+AGG - chr1_3:34948177-34948196 Msa0116080:intron 35.0%
ATGCTTGAACAACTAATCCT+AGG - chr1_3:34948211-34948230 Msa0116080:intron 35.0%
AGTAAGACAAGACATATGGA+TGG + chr1_3:34948425-34948444 None:intergenic 35.0%
TCCATATGTCTTGTCTTACT+TGG - chr1_3:34948425-34948444 Msa0116080:intron 35.0%
TCCAAGTAAGACAAGACATA+TGG + chr1_3:34948429-34948448 None:intergenic 35.0%
TATGTCTTGTCTTACTTGGA+AGG - chr1_3:34948429-34948448 Msa0116080:intron 35.0%
! GTGCACAAAATCTTTTTGCT+TGG - chr1_3:34948599-34948618 Msa0116080:intron 35.0%
! GGTTGAAATTGGGATTTTCA+AGG + chr1_3:34948745-34948764 None:intergenic 35.0%
AGAGTCAAAGGGTTGAAATT+GGG + chr1_3:34948755-34948774 None:intergenic 35.0%
AACAAGAGAGGGAAAAGATA+TGG + chr1_3:34948833-34948852 None:intergenic 35.0%
! ACTTCTATTTCTTTGCTCCT+CGG - chr1_3:34948856-34948875 Msa0116080:intron 35.0%
AAAAGAATGTGGCAACTTGT+AGG + chr1_3:34949104-34949123 None:intergenic 35.0%
CTAATTTCATGTCAAGATGG+TGG + chr1_3:34949216-34949235 None:intergenic 35.0%
! GTTGTGATGACAATGAGTTT+TGG - chr1_3:34949258-34949277 Msa0116080:intron 35.0%
AATCTATGGTAGAAGACCTA+CGG - chr1_3:34949318-34949337 Msa0116080:intron 35.0%
! GGAAGGACTATCTATGTTTT+TGG - chr1_3:34949339-34949358 Msa0116080:intron 35.0%
TCCTTAGGTTACATTCTTTG+AGG - chr1_3:34949369-34949388 Msa0116080:intron 35.0%
ACCTCAAAGAATGTAACCTA+AGG + chr1_3:34949373-34949392 None:intergenic 35.0%
!! TCAAATGATGGATGCAATTG+TGG - chr1_3:34949435-34949454 Msa0116080:intron 35.0%
GTTGATCATCGATACGAATT+TGG + chr1_3:34949486-34949505 None:intergenic 35.0%
TCTATGCAATTTGCAACACA+AGG + chr1_3:34949568-34949587 None:intergenic 35.0%
TTGTATTATACGATGGTTGG+TGG - chr1_3:34949705-34949724 Msa0116080:intron 35.0%
TGTTAGACATCTTGTACTTC+AGG - chr1_3:34949745-34949764 Msa0116080:intron 35.0%
AGTTGTGTTGTGGTTTAGTA+TGG - chr1_3:34949773-34949792 Msa0116080:intron 35.0%
GTTGTGTTGTGGTTTAGTAT+GGG - chr1_3:34949774-34949793 Msa0116080:intron 35.0%
TTCAAGGGACTAGACAAATT+GGG + chr1_3:34949833-34949852 None:intergenic 35.0%
AGAACAAAACTCAAGCTCAA+TGG - chr1_3:34950005-34950024 Msa0116080:intron 35.0%
! TTTTCCCTTAACAACACCAA+TGG + chr1_3:34950171-34950190 None:intergenic 35.0%
! TTAAGGGAAAACGTCCATTT+TGG - chr1_3:34950180-34950199 Msa0116080:CDS 35.0%
CAAACATTTAGGGACTAAAC+TGG + chr1_3:34950228-34950247 None:intergenic 35.0%
CAGTTTAGTCCCTAAATGTT+TGG - chr1_3:34950226-34950245 Msa0116080:CDS 35.0%
AGGACTTCTAATGACCAAAA+TGG - chr1_3:34950406-34950425 Msa0116080:CDS 35.0%
ACTTCTAATGACCAAAATGG+TGG - chr1_3:34950409-34950428 Msa0116080:CDS 35.0%
GAAGTGGAGAAGAAATCAAA+TGG - chr1_3:34950565-34950584 Msa0116080:intron 35.0%
TGATCAAGATGACTGAAATG+TGG - chr1_3:34950600-34950619 Msa0116080:intron 35.0%
GAAGAAAGTAATCGTCAACA+AGG - chr1_3:34950746-34950765 Msa0116080:intron 35.0%
ATATTATATGTAGGACCGGA+AGG + chr1_3:34950999-34951018 None:intergenic 35.0%
TATTGCGAAGTTCCGTATAT+TGG - chr1_3:34951026-34951045 Msa0116080:CDS 35.0%
!! GTGTTCATAATTTTGGAGAG+AGG - chr1_3:34951254-34951273 Msa0116080:CDS 35.0%
ACAATAGCAAATCTAGATCC+GGG - chr1_3:34951597-34951616 Msa0116080:intron 35.0%
AAGCTGGACTTTAAATAAGC+CGG + chr1_3:34951660-34951679 None:intergenic 35.0%
TGAATCAGGCTAAGACTTAA+AGG - chr1_3:34951717-34951736 Msa0116080:intron 35.0%
CACATATGTTCTGGTATGAT+AGG + chr1_3:34951756-34951775 None:intergenic 35.0%
AAGATTCAAGTAAGGATCTG+CGG + chr1_3:34951983-34952002 None:intergenic 35.0%
GTTAGAGTCGAAAGTTAGAT+GGG + chr1_3:34952012-34952031 None:intergenic 35.0%
GAAAATGTTAGCCATACTGA+AGG - chr1_3:34952067-34952086 Msa0116080:intron 35.0%
AATTAACTACCATTGTGCCA+GGG + chr1_3:34952225-34952244 None:intergenic 35.0%
AACTGCAATTATCTACCGTT+CGG + chr1_3:34952260-34952279 None:intergenic 35.0%
AACGGTAGATAATTGCAGTT+GGG - chr1_3:34952260-34952279 Msa0116080:intron 35.0%
!! CAAGGAGTATACGTACTTTT+GGG - chr1_3:34952561-34952580 Msa0116080:CDS 35.0%
!! CGTACTTTTGGGTATACTTT+TGG - chr1_3:34952572-34952591 Msa0116080:CDS 35.0%
TGGGTATTACCCTCTTAATA+TGG - chr1_3:34952592-34952611 Msa0116080:CDS 35.0%
GGGTATTACCCTCTTAATAT+GGG - chr1_3:34952593-34952612 Msa0116080:CDS 35.0%
TTACCCTCTTAATATGGGTA+AGG - chr1_3:34952598-34952617 Msa0116080:CDS 35.0%
!! TAAAAGTGCTGATCATGGAT+GGG + chr1_3:34952771-34952790 None:intergenic 35.0%
!! ATAAAAGTGCTGATCATGGA+TGG + chr1_3:34952772-34952791 None:intergenic 35.0%
ATTTGACTATCGAGCATAAG+AGG - chr1_3:34952790-34952809 Msa0116080:CDS 35.0%
ATTGAGATTTGGCAATCGAA+TGG - chr1_3:34953439-34953458 Msa0116080:intron 35.0%
! TCACATAGTGAGTTTGAGTT+CGG + chr1_3:34953513-34953532 None:intergenic 35.0%
TTATAGCATGCCCAGAAATA+AGG + chr1_3:34953655-34953674 None:intergenic 35.0%
!! TATTTCTGGGCATGCTATAA+AGG - chr1_3:34953655-34953674 Msa0116080:intron 35.0%
! ACTCCCATCAGTATTTTCAT+GGG - chr1_3:34953715-34953734 Msa0116080:CDS 35.0%
GTACCCATGAAAATACTGAT+GGG + chr1_3:34953721-34953740 None:intergenic 35.0%
AGTACCCATGAAAATACTGA+TGG + chr1_3:34953722-34953741 None:intergenic 35.0%
!! CCAACATTGATTTCACAGAT+CGG + chr1_3:34953799-34953818 None:intergenic 35.0%
TCTGTGAAATCAATGTTGGA+TGG - chr1_3:34953800-34953819 Msa0116080:intron 35.0%
AAATCAATGTTGGATGGCAA+AGG - chr1_3:34953806-34953825 Msa0116080:intron 35.0%
AGCAACAGAGACATAAAAAG+TGG + chr1_3:34953862-34953881 None:intergenic 35.0%
TTTGTGTCTCCTGAAAATGT+TGG - chr1_3:34953970-34953989 Msa0116080:CDS 35.0%
TGTGATTTACCGGAAGTTTA+CGG + chr1_3:34954023-34954042 None:intergenic 35.0%
TCAAATCAACAAAAGTGGCA+TGG + chr1_3:34954074-34954093 None:intergenic 35.0%
! GTCATTAGCTTCTTTCAACT+AGG - chr1_3:34954145-34954164 Msa0116080:intron 35.0%
CCTGAAGATAGCAAAAAATC+AGG + chr1_3:34954231-34954250 None:intergenic 35.0%
!!! CCTGATTTTTTGCTATCTTC+AGG - chr1_3:34954228-34954247 Msa0116080:CDS 35.0%
! TAGATTTTGCAAAAGCTACC+GGG + chr1_3:34954408-34954427 None:intergenic 35.0%
ACTGTTATGCTGCATTTACT+TGG - chr1_3:34954613-34954632 Msa0116080:CDS 35.0%
!! GAGTATGTAGGTTCTGAAAT+AGG + chr1_3:34954724-34954743 None:intergenic 35.0%
ATTTCAGAACCTACATACTC+TGG - chr1_3:34954724-34954743 Msa0116080:CDS 35.0%
ATCATCAATCCATAACCAGA+GGG + chr1_3:34954914-34954933 None:intergenic 35.0%
TATCATCAATCCATAACCAG+AGG + chr1_3:34954915-34954934 None:intergenic 35.0%
ATGACTGTCATTCAACTTAC+AGG - chr1_3:34955054-34955073 Msa0116080:CDS 35.0%
TCAGAGAATGAATCTAGTTG+GGG - chr1_3:34955118-34955137 Msa0116080:CDS 35.0%
!!! GTTTTTTGTATTGCAGCTGT+AGG - chr1_3:34955184-34955203 Msa0116080:five_prime_UTR 35.0%
GTGCCAGACATAACAAAATA+TGG + chr1_3:34955217-34955236 None:intergenic 35.0%
GCCATGGGAAAAAGTTCAAA+TGG + chr1_3:34942252-34942271 None:intergenic 40.0%
!! TTTGAACTTTTTCCCATGGC+GGG - chr1_3:34942252-34942271 Msa0116080:intron 40.0%
! AAACAACACTGGTGCTGAAA+CGG - chr1_3:34942281-34942300 Msa0116080:intron 40.0%
ACAAGCTATTGTCTCCGAAA+CGG - chr1_3:34942356-34942375 Msa0116080:intron 40.0%
! GACGATTTAGCTTCTGATGA+AGG - chr1_3:34942390-34942409 Msa0116080:intron 40.0%
GGTAGAAGGAAAAAGAAACC+AGG - chr1_3:34942465-34942484 Msa0116080:intron 40.0%
GAAACCAGGAAGAAAGAGTA+AGG - chr1_3:34942479-34942498 Msa0116080:intron 40.0%
TGAAATCGAGAAGGAGAAGA+CGG - chr1_3:34942503-34942522 Msa0116080:CDS 40.0%
! GAGTAAAGGTGATGATGACA+TGG - chr1_3:34942560-34942579 Msa0116080:CDS 40.0%
TTACTTGTCGGATTTGGATG+AGG - chr1_3:34942755-34942774 Msa0116080:intron 40.0%
GATGAGGCTGTGAAGAAAAA+GGG - chr1_3:34942771-34942790 Msa0116080:intron 40.0%
ATGAGGCTGTGAAGAAAAAG+GGG - chr1_3:34942772-34942791 Msa0116080:intron 40.0%
AAGACAGAGAAGAAGAAACC+TGG - chr1_3:34942873-34942892 Msa0116080:intron 40.0%
AGAAGAAACCTGGTAGGAAA+AGG - chr1_3:34942883-34942902 Msa0116080:intron 40.0%
! ATTTCCTTCCTTTTCCTACC+AGG + chr1_3:34942894-34942913 None:intergenic 40.0%
GATGAACAAGATGGGGAAAA+TGG - chr1_3:34943035-34943054 Msa0116080:intron 40.0%
TGATGCTGTTCAATGCATTC+AGG + chr1_3:34943173-34943192 None:intergenic 40.0%
! AAGGTATCCTCACTTGAAAG+AGG - chr1_3:34943650-34943669 Msa0116080:intron 40.0%
GAAAGAGGAGAAAATTGCTG+AGG - chr1_3:34943665-34943684 Msa0116080:intron 40.0%
GCGATCATCTGTACTTATCA+AGG - chr1_3:34943731-34943750 Msa0116080:intron 40.0%
AGGAATGGCTAATCTATGAG+GGG + chr1_3:34943765-34943784 None:intergenic 40.0%
CAGGAATGGCTAATCTATGA+GGG + chr1_3:34943766-34943785 None:intergenic 40.0%
ACAGGAATGGCTAATCTATG+AGG + chr1_3:34943767-34943786 None:intergenic 40.0%
TGGATAATCTTGTTCCCTGT+AGG - chr1_3:34943812-34943831 Msa0116080:intron 40.0%
ACGTTTGGATGAAGAGCAAA+TGG - chr1_3:34943920-34943939 Msa0116080:intron 40.0%
GAGATAGAAGCAAAGAGACA+AGG - chr1_3:34943951-34943970 Msa0116080:intron 40.0%
GCAAGAAGTAAGACTCTTTG+CGG + chr1_3:34943984-34944003 None:intergenic 40.0%
GCAATCAATCCATCTCTTCA+TGG - chr1_3:34944002-34944021 Msa0116080:intron 40.0%
GAGTCAAAACCATGAAGCAT+GGG + chr1_3:34944075-34944094 None:intergenic 40.0%
AGAGTCAAAACCATGAAGCA+TGG + chr1_3:34944076-34944095 None:intergenic 40.0%
! AGTACACACGCTCCTTTTTA+GGG + chr1_3:34944307-34944326 None:intergenic 40.0%
! GAGTTTGAGTTTATCTTCCG+AGG - chr1_3:34944530-34944549 Msa0116080:intron 40.0%
! TTCATGGTGGAAAAGAAGAG+AGG - chr1_3:34944564-34944583 Msa0116080:intron 40.0%
! TCATGGTGGAAAAGAAGAGA+GGG - chr1_3:34944565-34944584 Msa0116080:intron 40.0%
TCTTGACCATTCAGGAATCT+CGG + chr1_3:34944624-34944643 None:intergenic 40.0%
ATTCCTGAATGGTCAAGATC+TGG - chr1_3:34944626-34944645 Msa0116080:CDS 40.0%
TTCCTGAATGGTCAAGATCT+GGG - chr1_3:34944627-34944646 Msa0116080:CDS 40.0%
AACTCAGAGATGCAATTTGG+TGG + chr1_3:34944740-34944759 None:intergenic 40.0%
AAAGCCTGTTAGGAATGAAG+AGG - chr1_3:34944841-34944860 Msa0116080:intron 40.0%
GCTTGGTATTGCTTATCTGA+CGG + chr1_3:34945072-34945091 None:intergenic 40.0%
CAATTTCTCACTCTTGAGCA+TGG - chr1_3:34945149-34945168 Msa0116080:intron 40.0%
! CTCATGAAAGGTATGATGCA+TGG + chr1_3:34945410-34945429 None:intergenic 40.0%
TTTGTTACCCTTGCATCTTC+TGG - chr1_3:34945838-34945857 Msa0116080:intron 40.0%
ACAGAAACCAGAAGATGCAA+GGG + chr1_3:34945848-34945867 None:intergenic 40.0%
AACAGAAACCAGAAGATGCA+AGG + chr1_3:34945849-34945868 None:intergenic 40.0%
! CTGAGTTGTTGATTGAATGC+AGG - chr1_3:34946081-34946100 Msa0116080:intron 40.0%
!! TCTGGCTTTAGAACATCATC+CGG + chr1_3:34946319-34946338 None:intergenic 40.0%
!! TGATGTTCTAAAGCCAGACA+TGG - chr1_3:34946321-34946340 Msa0116080:intron 40.0%
!! GATGTTCTAAAGCCAGACAT+GGG - chr1_3:34946322-34946341 Msa0116080:intron 40.0%
TATGGATTTGAGCAGGAACT+TGG - chr1_3:34946364-34946383 Msa0116080:intron 40.0%
ATGGATTTGAGCAGGAACTT+GGG - chr1_3:34946365-34946384 Msa0116080:intron 40.0%
! CTTTCTAGCACTTGTGTTTC+TGG - chr1_3:34946452-34946471 Msa0116080:intron 40.0%
GTGCAACATCCAAAAAGTTC+AGG + chr1_3:34946568-34946587 None:intergenic 40.0%
GCACAGACAAAAAATTGACC+AGG + chr1_3:34946810-34946829 None:intergenic 40.0%
!!! GTGCTCTCTGGGATATTTTT+CGG - chr1_3:34947145-34947164 Msa0116080:intron 40.0%
!! AGAAGCATTTCAGAGAGTTC+AGG - chr1_3:34947202-34947221 Msa0116080:intron 40.0%
!!! AGGATGCCCCTTTTTAACTT+CGG - chr1_3:34947287-34947306 Msa0116080:intron 40.0%
AAGAGAGGCTAAAAACCAGT+AGG - chr1_3:34947471-34947490 Msa0116080:intron 40.0%
GGAGAGAAATGTAAAAGCTG+TGG + chr1_3:34947499-34947518 None:intergenic 40.0%
GAAAACGAGATTTGCATGTG+TGG + chr1_3:34947706-34947725 None:intergenic 40.0%
TATCTATTTGACCTACGTCC+TGG - chr1_3:34948295-34948314 Msa0116080:intron 40.0%
ATCGTGTGTGCTCAAACATT+CGG - chr1_3:34948684-34948703 Msa0116080:intron 40.0%
!! AAATTGGGATTTTCAAGGCG+TGG + chr1_3:34948740-34948759 None:intergenic 40.0%
GAGAGTCAAAGGGTTGAAAT+TGG + chr1_3:34948756-34948775 None:intergenic 40.0%
AGAGAGGGAAAAGATATGGA+TGG + chr1_3:34948829-34948848 None:intergenic 40.0%
CTCGTCAACAAATTCAGCAT+TGG + chr1_3:34949006-34949025 None:intergenic 40.0%
!! CAATGCTGAATTTGTTGACG+AGG - chr1_3:34949004-34949023 Msa0116080:intron 40.0%
CGTGTCCTTTGTTGCATTAA+AGG + chr1_3:34949142-34949161 None:intergenic 40.0%
AGAGTAGTTCACACACATTC+TGG + chr1_3:34949169-34949188 None:intergenic 40.0%
AGAATGTGTGTGAACTACTC+TGG - chr1_3:34949168-34949187 Msa0116080:intron 40.0%
GAATGTGTGTGAACTACTCT+GGG - chr1_3:34949169-34949188 Msa0116080:intron 40.0%
AATGTGTGTGAACTACTCTG+GGG - chr1_3:34949170-34949189 Msa0116080:intron 40.0%
! TGAACTACTCTGGGGATTAT+GGG - chr1_3:34949178-34949197 Msa0116080:intron 40.0%
!! GTGATGACAATGAGTTTTGG+AGG - chr1_3:34949261-34949280 Msa0116080:intron 40.0%
TGGAGGATTATAGGGATGTT+TGG - chr1_3:34949278-34949297 Msa0116080:intron 40.0%
AAGCTCGAACTGCAAATCTA+TGG - chr1_3:34949304-34949323 Msa0116080:intron 40.0%
AACATAGATAGTCCTTCCGT+AGG + chr1_3:34949337-34949356 None:intergenic 40.0%
!!! GTTTTTGGCATATGGTCCTT+AGG - chr1_3:34949354-34949373 Msa0116080:intron 40.0%
!! AATGATGGATGCAATTGTGG+AGG - chr1_3:34949438-34949457 Msa0116080:intron 40.0%
!!! GTTGGTGGTGAAGGTTATTT+TGG - chr1_3:34949720-34949739 Msa0116080:intron 40.0%
TCAGGCAAAAAGTTGTGTTG+TGG - chr1_3:34949763-34949782 Msa0116080:intron 40.0%
TCAAGGGACTAGACAAATTG+GGG + chr1_3:34949832-34949851 None:intergenic 40.0%
GTTCAAGGGACTAGACAAAT+TGG + chr1_3:34949834-34949853 None:intergenic 40.0%
! ATACGACTGGTTCTTTGCAA+TGG + chr1_3:34949936-34949955 None:intergenic 40.0%
GCTCAATGGTGAGAGTTATA+TGG - chr1_3:34950019-34950038 Msa0116080:intron 40.0%
!! GAATTGGAGTGCTTTTGAGT+CGG - chr1_3:34950114-34950133 Msa0116080:intron 40.0%
!! ACCTTCCATTGGTGTTGTTA+AGG - chr1_3:34950163-34950182 Msa0116080:intron 40.0%
!! CCTTCCATTGGTGTTGTTAA+GGG - chr1_3:34950164-34950183 Msa0116080:intron 40.0%
AACGCATTCACAGACCAAAA+TGG + chr1_3:34950197-34950216 None:intergenic 40.0%
! TTTTGGTCTGTGAATGCGTT+AGG - chr1_3:34950197-34950216 Msa0116080:CDS 40.0%
! GGTACAATTTGGGATCATTG+TGG - chr1_3:34950376-34950395 Msa0116080:CDS 40.0%
GTAATGGCCAACTCAAGATT+CGG - chr1_3:34950540-34950559 Msa0116080:intron 40.0%
TAATGGCCAACTCAAGATTC+GGG - chr1_3:34950541-34950560 Msa0116080:intron 40.0%
GAAAGTAATCGTCAACAAGG+TGG - chr1_3:34950749-34950768 Msa0116080:intron 40.0%
AGAAGATGACGTTGTTGATG+AGG - chr1_3:34950772-34950791 Msa0116080:intron 40.0%
TGCTCACAACTTATGTGCTT+AGG - chr1_3:34951342-34951361 Msa0116080:intron 40.0%
AGATACAAGTATAGTAGGGG+TGG - chr1_3:34951379-34951398 Msa0116080:intron 40.0%
GATACAAGTATAGTAGGGGT+GGG - chr1_3:34951380-34951399 Msa0116080:intron 40.0%
TTGAAATCCGTGCTGTGAAT+TGG + chr1_3:34951491-34951510 None:intergenic 40.0%
ACCGTTCACTTCAGATTAGA+CGG - chr1_3:34951536-34951555 Msa0116080:intron 40.0%
! ACCGTCTAATCTGAAGTGAA+CGG + chr1_3:34951540-34951559 None:intergenic 40.0%
AATATACCAGAAGGTCTGTC+AGG - chr1_3:34951624-34951643 Msa0116080:intron 40.0%
ATATACCAGAAGGTCTGTCA+GGG - chr1_3:34951625-34951644 Msa0116080:intron 40.0%
CTTTAAATAAGCCGGACCAT+AGG + chr1_3:34951652-34951671 None:intergenic 40.0%
! GGCTTATTTAAAGTCCAGCT+TGG - chr1_3:34951659-34951678 Msa0116080:intron 40.0%
ATAAACAAGTTAGGCCAAGC+TGG + chr1_3:34951676-34951695 None:intergenic 40.0%
GACTTAAAGGAAAGCCTACT+TGG - chr1_3:34951730-34951749 Msa0116080:intron 40.0%
ACCAGAACCATAGTTAGTTG+CGG + chr1_3:34951852-34951871 None:intergenic 40.0%
ACCACAAAGCGACAACAATT+TGG - chr1_3:34951939-34951958 Msa0116080:intron 40.0%
!! ACCAAATTGTTGTCGCTTTG+TGG + chr1_3:34951943-34951962 None:intergenic 40.0%
CGTTAGAGTCGAAAGTTAGA+TGG + chr1_3:34952013-34952032 None:intergenic 40.0%
CTGTCAATAAGCCTTCAGTA+TGG + chr1_3:34952081-34952100 None:intergenic 40.0%
ATTGACAGTTAAACGGAGAG+TGG - chr1_3:34952093-34952112 Msa0116080:intron 40.0%
! ACTACACATTTAGAGTTCCC+TGG - chr1_3:34952205-34952224 Msa0116080:intron 40.0%
CAATTAACTACCATTGTGCC+AGG + chr1_3:34952226-34952245 None:intergenic 40.0%
ACTGCAATTATCTACCGTTC+GGG + chr1_3:34952259-34952278 None:intergenic 40.0%
GAACGGTAGATAATTGCAGT+TGG - chr1_3:34952259-34952278 Msa0116080:intron 40.0%
ACGGTAGATAATTGCAGTTG+GGG - chr1_3:34952261-34952280 Msa0116080:intron 40.0%
! CCAAAAGTACGTATACTCGT+GGG + chr1_3:34952484-34952503 None:intergenic 40.0%
! CCACGAGTATACGTACTTTT+GGG - chr1_3:34952482-34952501 Msa0116080:CDS 40.0%
! CCAAAAGTACGTATACTCCT+TGG + chr1_3:34952563-34952582 None:intergenic 40.0%
!! CCAAGGAGTATACGTACTTT+TGG - chr1_3:34952560-34952579 Msa0116080:CDS 40.0%
! GACACGTCTTTTGATCATGT+AGG - chr1_3:34952737-34952756 Msa0116080:CDS 40.0%
!! AAAAGTGCTGATCATGGATG+GGG + chr1_3:34952770-34952789 None:intergenic 40.0%
!!! AATGTTTTGGGTTTGAGCAG+CGG - chr1_3:34952857-34952876 Msa0116080:CDS 40.0%
GACTTGTAGGAATTGAACCT+TGG - chr1_3:34952921-34952940 Msa0116080:CDS 40.0%
! AGCTTCTGGAAAAAAGTCCA+AGG + chr1_3:34952941-34952960 None:intergenic 40.0%
!!! TGGACTTTTTTCCAGAAGCT+AGG - chr1_3:34952941-34952960 Msa0116080:CDS 40.0%
ATACCTTCAGATTTCGGACT+TGG + chr1_3:34953000-34953019 None:intergenic 40.0%
!!! ACCTCGAACCTTTTTTACCT+CGG + chr1_3:34953307-34953326 None:intergenic 40.0%
TTTGGCAATCGAATGGAGTT+AGG - chr1_3:34953446-34953465 Msa0116080:CDS 40.0%
! TCCCATAGCTACCTTATTTC+TGG - chr1_3:34953641-34953660 Msa0116080:intron 40.0%
CCCAGAAATAAGGTAGCTAT+GGG + chr1_3:34953645-34953664 None:intergenic 40.0%
! CCCATAGCTACCTTATTTCT+GGG - chr1_3:34953642-34953661 Msa0116080:intron 40.0%
! GACTCCCATCAGTATTTTCA+TGG - chr1_3:34953714-34953733 Msa0116080:CDS 40.0%
TTTCATGGGTACTCTTCACA+TGG - chr1_3:34953729-34953748 Msa0116080:CDS 40.0%
CCGATCTGTGAAATCAATGT+TGG - chr1_3:34953796-34953815 Msa0116080:intron 40.0%
CACAAAATCAAGAGCAACCT+TGG + chr1_3:34953956-34953975 None:intergenic 40.0%
AGAGGAATTCCGTAAACTTC+CGG - chr1_3:34954011-34954030 Msa0116080:CDS 40.0%
GTAAACTTCCGGTAAATCAC+AGG - chr1_3:34954022-34954041 Msa0116080:CDS 40.0%
! TCTTCAGGTCCCGTTTATTT+TGG - chr1_3:34954243-34954262 Msa0116080:CDS 40.0%
CTATCACTAGGTGAAACTGA+GGG + chr1_3:34954592-34954611 None:intergenic 40.0%
AGCATAACAGTGCTATCACT+AGG + chr1_3:34954604-34954623 None:intergenic 40.0%
CTGCATTTACTTGGTTGAAC+TGG - chr1_3:34954622-34954641 Msa0116080:CDS 40.0%
ATATGCTATGCTTGATCTGG+TGG - chr1_3:34954847-34954866 Msa0116080:CDS 40.0%
! GTTGTTCACTTTGCTGTGAA+AGG - chr1_3:34954950-34954969 Msa0116080:CDS 40.0%
TGTCATTCAACTTACAGGTC+TGG - chr1_3:34955059-34955078 Msa0116080:CDS 40.0%
TTACAGGTCTGGAAAAACCA+AGG - chr1_3:34955070-34955089 Msa0116080:CDS 40.0%
!! TAGTTTGGTGTGGTGATCTT+GGG - chr1_3:34955162-34955181 Msa0116080:five_prime_UTR 40.0%
! TTGTTTTCTTCACCCGCCAT+GGG + chr1_3:34942267-34942286 None:intergenic 45.0%
GCCACGTCATCAACCTTTAA+CGG + chr1_3:34942309-34942328 None:intergenic 45.0%
! TTCTGATGAAGGTGATGACG+TGG - chr1_3:34942401-34942420 Msa0116080:intron 45.0%
TCAGCCTTACTCTTTCTTCC+TGG + chr1_3:34942486-34942505 None:intergenic 45.0%
GAGTAAGGCTGAAATCGAGA+AGG - chr1_3:34942494-34942513 Msa0116080:intron 45.0%
AGCGTTTGAGAACGGAACAA+AGG - chr1_3:34942530-34942549 Msa0116080:CDS 45.0%
TATTTCCGTTCATGCCACTC+CGG - chr1_3:34942596-34942615 Msa0116080:intron 45.0%
TTTCTACCGCGTTTCTTTGC+CGG + chr1_3:34942618-34942637 None:intergenic 45.0%
! GTAGGAGGGTTTTCTTCTGT+TGG - chr1_3:34942684-34942703 Msa0116080:intron 45.0%
GGATGAGGCTGTGAAGAAAA+AGG - chr1_3:34942770-34942789 Msa0116080:intron 45.0%
GTGAAGAAAAAGGGGAAACG+TGG - chr1_3:34942780-34942799 Msa0116080:intron 45.0%
AGAAAAAGGGGAAACGTGGT+AGG - chr1_3:34942784-34942803 Msa0116080:intron 45.0%
GAAACGTGGTAGGAAGAAGA+AGG - chr1_3:34942794-34942813 Msa0116080:intron 45.0%
CAGAGAAGAAGAAACCTGGT+AGG - chr1_3:34942877-34942896 Msa0116080:intron 45.0%
GAAACCTGGTAGGAAAAGGA+AGG - chr1_3:34942887-34942906 Msa0116080:intron 45.0%
CAATCAACAGTGGATCGAAG+AGG - chr1_3:34943337-34943356 Msa0116080:intron 45.0%
! CTGACATTGATGGCACATCA+AGG + chr1_3:34943366-34943385 None:intergenic 45.0%
TCAGAGAAATGACAAGGGCA+GGG - chr1_3:34943382-34943401 Msa0116080:CDS 45.0%
TTGCAATTACCACAGCACAC+TGG + chr1_3:34943696-34943715 None:intergenic 45.0%
GAATGGCTAATCTATGAGGG+GGG + chr1_3:34943763-34943782 None:intergenic 45.0%
GGAATGGCTAATCTATGAGG+GGG + chr1_3:34943764-34943783 None:intergenic 45.0%
ATTTGGAGAGCTCAACGTCA+TGG + chr1_3:34943869-34943888 None:intergenic 45.0%
TGAAGAGCAAATGGCTGAGA+AGG - chr1_3:34943929-34943948 Msa0116080:intron 45.0%
!!! GTTGCTTTTCCCATGCTTCA+TGG - chr1_3:34944063-34944082 Msa0116080:intron 45.0%
! CAGTACACACGCTCCTTTTT+AGG + chr1_3:34944308-34944327 None:intergenic 45.0%
! CTAAAAAGGAGCGTGTGTAC+TGG - chr1_3:34944306-34944325 Msa0116080:intron 45.0%
! TGTACTGGTAGGGGCTTATT+TGG - chr1_3:34944321-34944340 Msa0116080:intron 45.0%
! AGCATTTTGCACAGCTTCTG+TGG + chr1_3:34944439-34944458 None:intergenic 45.0%
CATGAAGATAATCACGCCCT+CGG + chr1_3:34944550-34944569 None:intergenic 45.0%
CTTGACCATTCAGGAATCTC+GGG + chr1_3:34944623-34944642 None:intergenic 45.0%
ATTCCCTGTCCAAAAGCTGA+AGG - chr1_3:34944674-34944693 Msa0116080:intron 45.0%
! TCACCTTCAGCTTTTGGACA+GGG + chr1_3:34944680-34944699 None:intergenic 45.0%
! ATCACCTTCAGCTTTTGGAC+AGG + chr1_3:34944681-34944700 None:intergenic 45.0%
TGTCCAAAAGCTGAAGGTGA+TGG - chr1_3:34944680-34944699 Msa0116080:intron 45.0%
! TCACCATCACCTTCAGCTTT+TGG + chr1_3:34944686-34944705 None:intergenic 45.0%
GAAGTGTGCTTCTCAGTTCA+AGG + chr1_3:34944718-34944737 None:intergenic 45.0%
! TGCGACATTTTCAACGTCAC+TGG - chr1_3:34944960-34944979 Msa0116080:intron 45.0%
TTTCAACGTCACTGGAGCAA+AGG - chr1_3:34944968-34944987 Msa0116080:intron 45.0%
TTCAACGTCACTGGAGCAAA+GGG - chr1_3:34944969-34944988 Msa0116080:intron 45.0%
TGATTGCTTAGATTGGTGCG+AGG - chr1_3:34945120-34945139 Msa0116080:intron 45.0%
AGGCAACAGATAGACATGTC+AGG + chr1_3:34946041-34946060 None:intergenic 45.0%
GAGGCCAATTTAGCCAATCA+GGG + chr1_3:34946153-34946172 None:intergenic 45.0%
TGAGGCCAATTTAGCCAATC+AGG + chr1_3:34946154-34946173 None:intergenic 45.0%
! TGATTGGCTAAATTGGCCTC+AGG - chr1_3:34946153-34946172 Msa0116080:intron 45.0%
ATGAACTCAGCACAATGACG+AGG + chr1_3:34946229-34946248 None:intergenic 45.0%
! TAACCTTGCTGTGAAGTTGC+CGG - chr1_3:34946297-34946316 Msa0116080:intron 45.0%
!!! TATGTTTTAGGGCCCATGTC+TGG + chr1_3:34946337-34946356 None:intergenic 45.0%
ATCAGATGCATCGTCTTTCC+TGG - chr1_3:34946789-34946808 Msa0116080:intron 45.0%
CTACATGGCGATAATCAGGA+TGG - chr1_3:34947021-34947040 Msa0116080:intron 45.0%
TGCGTTCCAGTCATGGAAAA+TGG - chr1_3:34947105-34947124 Msa0116080:intron 45.0%
GCGTTCCAGTCATGGAAAAT+GGG - chr1_3:34947106-34947125 Msa0116080:intron 45.0%
CGTTCCAGTCATGGAAAATG+GGG - chr1_3:34947107-34947126 Msa0116080:intron 45.0%
GTTCCAGTCATGGAAAATGG+GGG - chr1_3:34947108-34947127 Msa0116080:intron 45.0%
AATGGGGGTGATTCCTTAGA+CGG - chr1_3:34947123-34947142 Msa0116080:intron 45.0%
!! GTTAAAAAGGGGCATCCTAG+CGG + chr1_3:34947285-34947304 None:intergenic 45.0%
! AAAAGCATAAGCCAGGACGT+AGG + chr1_3:34948309-34948328 None:intergenic 45.0%
TCGTGTGTGCTCAAACATTC+GGG - chr1_3:34948685-34948704 Msa0116080:intron 45.0%
! TGCTCAAACATTCGGGTTAG+CGG - chr1_3:34948692-34948711 Msa0116080:intron 45.0%
ATCTACACTTGACAGAACCG+AGG + chr1_3:34948876-34948895 None:intergenic 45.0%
!! TGCTGAATTTGTTGACGAGG+AGG - chr1_3:34949007-34949026 Msa0116080:intron 45.0%
!! GCTGAATTTGTTGACGAGGA+GGG - chr1_3:34949008-34949027 Msa0116080:intron 45.0%
!! CTGAATTTGTTGACGAGGAG+GGG - chr1_3:34949009-34949028 Msa0116080:intron 45.0%
GAATGTGGCAACTTGTAGGT+TGG + chr1_3:34949100-34949119 None:intergenic 45.0%
! GTGAACTACTCTGGGGATTA+TGG - chr1_3:34949177-34949196 Msa0116080:intron 45.0%
! TACTCTGGGGATTATGGGAT+CGG - chr1_3:34949183-34949202 Msa0116080:intron 45.0%
TATGGTAGAAGACCTACGGA+AGG - chr1_3:34949322-34949341 Msa0116080:intron 45.0%
GATGCAATTGTGGAGGAAGT+CGG - chr1_3:34949445-34949464 Msa0116080:intron 45.0%
!! TATACGATGGTTGGTGGTGA+AGG - chr1_3:34949711-34949730 Msa0116080:intron 45.0%
ACTAGACAAATTGGGGGCAA+AGG + chr1_3:34949825-34949844 None:intergenic 45.0%
CAAGGGACTAGACAAATTGG+GGG + chr1_3:34949831-34949850 None:intergenic 45.0%
CCCTTAACAACACCAATGGA+AGG + chr1_3:34950167-34950186 None:intergenic 45.0%
! CAATGGGGAAACCACCATTT+TGG + chr1_3:34950423-34950442 None:intergenic 45.0%
ACTTCTCCCGAATCTTGAGT+TGG + chr1_3:34950550-34950569 None:intergenic 45.0%
AACTCAAGATTCGGGAGAAG+TGG - chr1_3:34950549-34950568 Msa0116080:intron 45.0%
TGGAGGATGATCGATCTGAT+TGG - chr1_3:34950812-34950831 Msa0116080:intron 45.0%
AAGTATAGTAGGGGTGGGAA+TGG - chr1_3:34951385-34951404 Msa0116080:intron 45.0%
!! ACGGTTGAGATTTGCTACTG+CGG + chr1_3:34951448-34951467 None:intergenic 45.0%
ACCGTCAATCCATGATCTGA+CGG - chr1_3:34951463-34951482 Msa0116080:intron 45.0%
! ACCGTCAGATCATGGATTGA+CGG + chr1_3:34951467-34951486 None:intergenic 45.0%
GAATTGGAACCGTCAGATCA+TGG + chr1_3:34951475-34951494 None:intergenic 45.0%
ATAGCAAATCTAGATCCGGG+TGG - chr1_3:34951600-34951619 Msa0116080:intron 45.0%
CCTTCTGGTATATTTCCACC+CGG + chr1_3:34951618-34951637 None:intergenic 45.0%
TATACCAGAAGGTCTGTCAG+GGG - chr1_3:34951626-34951645 Msa0116080:intron 45.0%
TCTGGTATGATAGGCCAAGT+AGG + chr1_3:34951747-34951766 None:intergenic 45.0%
AGTTAGTTGCGGGGGTAAAA+TGG + chr1_3:34951841-34951860 None:intergenic 45.0%
TTTACCCCCGCAACTAACTA+TGG - chr1_3:34951842-34951861 Msa0116080:intron 45.0%
AGAACCATAGTTAGTTGCGG+GGG + chr1_3:34951849-34951868 None:intergenic 45.0%
CAGAACCATAGTTAGTTGCG+GGG + chr1_3:34951850-34951869 None:intergenic 45.0%
CCAGAACCATAGTTAGTTGC+GGG + chr1_3:34951851-34951870 None:intergenic 45.0%
! TTTAGAGTTCCCTGGCACAA+TGG - chr1_3:34952213-34952232 Msa0116080:intron 45.0%
! CCCACGAGTATACGTACTTT+TGG - chr1_3:34952481-34952500 Msa0116080:CDS 45.0%
! CCCAAAAGTACGTATACTCG+TGG + chr1_3:34952485-34952504 None:intergenic 45.0%
TGACTATCGAGCATAAGAGG+AGG - chr1_3:34952793-34952812 Msa0116080:CDS 45.0%
CAGCGGTGATCAATTGACAT+GGG - chr1_3:34952874-34952893 Msa0116080:CDS 45.0%
AAACAGCATCTCCTAGCTTC+TGG + chr1_3:34952955-34952974 None:intergenic 45.0%
!!! GATGCTGTTTTCATTCCAGC+TGG - chr1_3:34952965-34952984 Msa0116080:CDS 45.0%
!! TTCAGATTTCGGACTTGGTG+CGG + chr1_3:34952995-34953014 None:intergenic 45.0%
TCCGAGGTAAAAAAGGTTCG+AGG - chr1_3:34953303-34953322 Msa0116080:intron 45.0%
! AGGAAAATGGACTCTCCAAG+AGG - chr1_3:34953369-34953388 Msa0116080:intron 45.0%
! AAAATGGACTCTCCAAGAGG+TGG - chr1_3:34953372-34953391 Msa0116080:intron 45.0%
CAAATTCGAAGACCACCTCT+TGG + chr1_3:34953387-34953406 None:intergenic 45.0%
CAAGAGGTGGTCTTCGAATT+TGG - chr1_3:34953385-34953404 Msa0116080:intron 45.0%
ATGTAATGTGGGCTCACAAC+AGG - chr1_3:34953581-34953600 Msa0116080:intron 45.0%
GCCCAGAAATAAGGTAGCTA+TGG + chr1_3:34953646-34953665 None:intergenic 45.0%
! CACAGTCGTCGGTAGTTTTT+AGG + chr1_3:34953695-34953714 None:intergenic 45.0%
! CTTGGTGCATGACTGCAAAA+TGG + chr1_3:34953938-34953957 None:intergenic 45.0%
! CATTTTGCAGTCATGCACCA+AGG - chr1_3:34953936-34953955 Msa0116080:intron 45.0%
! AAGCACTCGCCAACATTTTC+AGG + chr1_3:34953982-34954001 None:intergenic 45.0%
TCTGTGGACCTGTGATTTAC+CGG + chr1_3:34954033-34954052 None:intergenic 45.0%
TACCTCCAATTTGTCCTCTG+TGG + chr1_3:34954049-34954068 None:intergenic 45.0%
!! AACTGAGGGTGCGTTAGTTT+TGG + chr1_3:34954578-34954597 None:intergenic 45.0%
GCTATCACTAGGTGAAACTG+AGG + chr1_3:34954593-34954612 None:intergenic 45.0%
ATGACAGGACCAGAGTATGT+AGG + chr1_3:34954736-34954755 None:intergenic 45.0%
! TTGAAGCGTGTAGTTTGGTG+TGG - chr1_3:34955152-34955171 Msa0116080:five_prime_UTR 45.0%
!! GTAGTTTGGTGTGGTGATCT+TGG - chr1_3:34955161-34955180 Msa0116080:five_prime_UTR 45.0%
!!! ACATTATTTTTAAATTTTTT+AGG - chr1_3:34950461-34950480 Msa0116080:CDS 5.0%
!!! CTATTATATTAATAATTTTT+TGG - chr1_3:34952355-34952374 Msa0116080:CDS 5.0%
!! GTTGTTTTCTTCACCCGCCA+TGG + chr1_3:34942268-34942287 None:intergenic 50.0%
GCGGGTGAAGAAAACAACAC+TGG - chr1_3:34942270-34942289 Msa0116080:intron 50.0%
!! TGCTGAAACGGTGCCGTTAA+AGG - chr1_3:34942293-34942312 Msa0116080:intron 50.0%
!! GCCGTTAAAGGTTGATGACG+TGG - chr1_3:34942305-34942324 Msa0116080:intron 50.0%
AATCGAGAAGGAGAAGACGG+AGG - chr1_3:34942506-34942525 Msa0116080:CDS 50.0%
!! ACGGAGGAAGCGTTTGAGAA+CGG - chr1_3:34942522-34942541 Msa0116080:CDS 50.0%
!! AAGGTGCTGATGTGGTAGGA+GGG - chr1_3:34942670-34942689 Msa0116080:intron 50.0%
! GGTTTTCTTCTGTTGGCGTG+AGG - chr1_3:34942691-34942710 Msa0116080:intron 50.0%
TTGGCGTGAGGAAGAGTGAA+AGG - chr1_3:34942703-34942722 Msa0116080:intron 50.0%
TGAGGAAGAGTGAAAGGCCT+AGG - chr1_3:34942709-34942728 Msa0116080:intron 50.0%
GTCAGAGAAATGACAAGGGC+AGG - chr1_3:34943381-34943400 Msa0116080:CDS 50.0%
CTCAACGTCATGGTCGTTGT+TGG + chr1_3:34943859-34943878 None:intergenic 50.0%
! AAAGGAGCGTGTGTACTGGT+AGG - chr1_3:34944310-34944329 Msa0116080:intron 50.0%
! AAGGAGCGTGTGTACTGGTA+GGG - chr1_3:34944311-34944330 Msa0116080:intron 50.0%
CACGAAGCTCACAGCAACAA+AGG + chr1_3:34944478-34944497 None:intergenic 50.0%
CTTTGTTGCTGTGAGCTTCG+TGG - chr1_3:34944476-34944495 Msa0116080:intron 50.0%
! CGAGGGCGTGATTATCTTCA+TGG - chr1_3:34944548-34944567 Msa0116080:intron 50.0%
GGGCGTGATTATCTTCATGG+TGG - chr1_3:34944551-34944570 Msa0116080:intron 50.0%
CACCCAGATCTTGACCATTC+AGG + chr1_3:34944632-34944651 None:intergenic 50.0%
CTGAATGGTCAAGATCTGGG+TGG - chr1_3:34944630-34944649 Msa0116080:CDS 50.0%
GGGTGGCATGCAAATGATGA+TGG - chr1_3:34944647-34944666 Msa0116080:intron 50.0%
! GCTGAAGGTGATGGTGATCA+TGG - chr1_3:34944689-34944708 Msa0116080:intron 50.0%
TCAACGTCACTGGAGCAAAG+GGG - chr1_3:34944970-34944989 Msa0116080:intron 50.0%
AATGCACGCCACATGACAAG+CGG + chr1_3:34945049-34945068 None:intergenic 50.0%
TTTCTAGATGGTCTGCTGCC+TGG - chr1_3:34945506-34945525 Msa0116080:intron 50.0%
TTCTAGATGGTCTGCTGCCT+GGG - chr1_3:34945507-34945526 Msa0116080:intron 50.0%
! ACAGCATTTTACGCGCACCA+AGG + chr1_3:34945631-34945650 None:intergenic 50.0%
ACACAAAAGGTCGCCCTGAT+TGG - chr1_3:34946137-34946156 Msa0116080:intron 50.0%
! GTCGCCCTGATTGGCTAAAT+TGG - chr1_3:34946146-34946165 Msa0116080:intron 50.0%
GATTTGAGCAGGAACTTGGG+CGG - chr1_3:34946368-34946387 Msa0116080:intron 50.0%
ATTTGAGCAGGAACTTGGGC+GGG - chr1_3:34946369-34946388 Msa0116080:intron 50.0%
CAAGACAAGAGGGAGCTACA+TGG - chr1_3:34947006-34947025 Msa0116080:intron 50.0%
GGAGCTACATGGCGATAATC+AGG - chr1_3:34947017-34947036 Msa0116080:intron 50.0%
! TCACCCCCATTTTCCATGAC+TGG + chr1_3:34947114-34947133 None:intergenic 50.0%
ATTCCTTAGACGGTGCTCTC+TGG - chr1_3:34947133-34947152 Msa0116080:intron 50.0%
TTCCTTAGACGGTGCTCTCT+GGG - chr1_3:34947134-34947153 Msa0116080:intron 50.0%
!! CCTGCTTTAAAGGAGAGCAG+TGG + chr1_3:34947233-34947252 None:intergenic 50.0%
!! CCACTGCTCTCCTTTAAAGC+AGG - chr1_3:34947230-34947249 Msa0116080:intron 50.0%
GTAAAAGCTGTGGGACCTAC+TGG + chr1_3:34947489-34947508 None:intergenic 50.0%
GAGAGAGAGAGAGAGGGAAT+GGG + chr1_3:34947951-34947970 None:intergenic 50.0%
AGAGAGAGAGAGAGAGGGAA+TGG + chr1_3:34947952-34947971 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + chr1_3:34947957-34947976 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr1_3:34947956-34947975 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+GGG + chr1_3:34947956-34947975 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + chr1_3:34947957-34947976 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr1_3:34947956-34947975 None:intergenic 50.0%
!! GGAGTGCTTTTGAGTCGGTA+TGG - chr1_3:34950119-34950138 Msa0116080:intron 50.0%
GGGATCATTGTGGCACAAGT+AGG - chr1_3:34950386-34950405 Msa0116080:CDS 50.0%
ATGCGCAGCTATCACGAGTT+GGG + chr1_3:34950713-34950732 None:intergenic 50.0%
GACGGTTCCAATTCACAGCA+CGG - chr1_3:34951481-34951500 Msa0116080:intron 50.0%
ACGGTGAAGAACAGCTACTG+CGG - chr1_3:34951555-34951574 Msa0116080:intron 50.0%
CCGGGTGGAAATATACCAGA+AGG - chr1_3:34951615-34951634 Msa0116080:intron 50.0%
CCCGCAACTAACTATGGTTC+TGG - chr1_3:34951848-34951867 Msa0116080:intron 50.0%
ATTGCAGTTAGCTGCCCGAA+CGG - chr1_3:34952242-34952261 Msa0116080:intron 50.0%
CGAGCATAAGAGGAGGCTTA+AGG - chr1_3:34952800-34952819 Msa0116080:CDS 50.0%
GCATAAGAGGAGGCTTAAGG+AGG - chr1_3:34952803-34952822 Msa0116080:CDS 50.0%
AGGAGGCTTAAGGAGGAGTA+TGG - chr1_3:34952810-34952829 Msa0116080:CDS 50.0%
GCAGCGGTGATCAATTGACA+TGG - chr1_3:34952873-34952892 Msa0116080:CDS 50.0%
GCACCAAGTCCGAAATCTGA+AGG - chr1_3:34952994-34953013 Msa0116080:intron 50.0%
TAATGTGGGCTCACAACAGG+TGG - chr1_3:34953584-34953603 Msa0116080:intron 50.0%
AATGTGGGCTCACAACAGGT+GGG - chr1_3:34953585-34953604 Msa0116080:intron 50.0%
CGAGTGCTTTCGTTTGACAG+AGG - chr1_3:34953993-34954012 Msa0116080:CDS 50.0%
GGTAAATCACAGGTCCACAG+AGG - chr1_3:34954032-34954051 Msa0116080:CDS 50.0%
CAGGTCCACAGAGGACAAAT+TGG - chr1_3:34954041-34954060 Msa0116080:CDS 50.0%
GTCCACAGAGGACAAATTGG+AGG - chr1_3:34954044-34954063 Msa0116080:CDS 50.0%
GCTTGATCTGGTGGAGAAGT+TGG - chr1_3:34954856-34954875 Msa0116080:CDS 50.0%
TGATCTGGTGGAGAAGTTGG+AGG - chr1_3:34954859-34954878 Msa0116080:CDS 50.0%
TGGAGAAGTTGGAGGAAGCA+AGG - chr1_3:34954867-34954886 Msa0116080:CDS 50.0%
GTTGGAGGAAGCAAGGTTAG+TGG - chr1_3:34954874-34954893 Msa0116080:CDS 50.0%
AACTTCACGCCCTCTGGTTA+TGG - chr1_3:34954902-34954921 Msa0116080:CDS 50.0%
GTCCTTCAACGACGCCGTTT+CGG + chr1_3:34942373-34942392 None:intergenic 55.0%
! GGTGATGATGACATGGCAGC+CGG - chr1_3:34942567-34942586 Msa0116080:CDS 55.0%
CTTTGCCGGAGTGGCATGAA+CGG + chr1_3:34942604-34942623 None:intergenic 55.0%
!! AACAGGGGAAGGTGCTGATG+TGG - chr1_3:34942662-34942681 Msa0116080:intron 55.0%
!! GAAGGTGCTGATGTGGTAGG+AGG - chr1_3:34942669-34942688 Msa0116080:intron 55.0%
! AGGAGCGTGTGTACTGGTAG+GGG - chr1_3:34944312-34944331 Msa0116080:intron 55.0%
TGTTGCTGTGAGCTTCGTGG+CGG - chr1_3:34944479-34944498 Msa0116080:intron 55.0%
! CTTCGTGGCGGAAAGCTTCT+AGG - chr1_3:34944491-34944510 Msa0116080:intron 55.0%
CCATTCAGGAATCTCGGGCA+GGG + chr1_3:34944618-34944637 None:intergenic 55.0%
ACCATTCAGGAATCTCGGGC+AGG + chr1_3:34944619-34944638 None:intergenic 55.0%
CATCCGGCAACTTCACAGCA+AGG + chr1_3:34946303-34946322 None:intergenic 55.0%
TTTGAGCAGGAACTTGGGCG+GGG - chr1_3:34946370-34946389 Msa0116080:intron 55.0%
AGCACCGTGAGCAAGACAAG+AGG - chr1_3:34946995-34947014 Msa0116080:intron 55.0%
GCACCGTGAGCAAGACAAGA+GGG - chr1_3:34946996-34947015 Msa0116080:intron 55.0%
GCTCCCTCTTGTCTTGCTCA+CGG + chr1_3:34947002-34947021 None:intergenic 55.0%
!! ATCCCAGAGAGCACCGTCTA+AGG + chr1_3:34947139-34947158 None:intergenic 55.0%
GAGAGAGAGAGAGAGAGAGG+GGG + chr1_3:34947955-34947974 None:intergenic 55.0%
CGAGGAGGGGAAAAAGCTAG+AGG - chr1_3:34949022-34949041 Msa0116080:intron 55.0%
CATGCGCAGCTATCACGAGT+TGG + chr1_3:34950714-34950733 None:intergenic 55.0%
AGTAGGGGTGGGAATGGATC+TGG - chr1_3:34951391-34951410 Msa0116080:intron 55.0%
CTGATGGGAGTCACAGTCGT+CGG + chr1_3:34953706-34953725 None:intergenic 55.0%
GTTGCAAACTTCACGCCCTC+TGG - chr1_3:34954896-34954915 Msa0116080:CDS 55.0%
CTCCGAAACGGCGTCGTTGA+AGG - chr1_3:34942368-34942387 Msa0116080:intron 60.0%
GCCACTCCGGCAAAGAAACG+CGG - chr1_3:34942609-34942628 Msa0116080:intron 60.0%
ACCGCGTTTCTTTGCCGGAG+TGG + chr1_3:34942613-34942632 None:intergenic 60.0%
!! GGGGAAGGTGCTGATGTGGT+AGG - chr1_3:34942666-34942685 Msa0116080:intron 60.0%
GAGGCATGTCCAGTGTGCTG+TGG - chr1_3:34943684-34943703 Msa0116080:intron 60.0%
! CGTGGCGGAAAGCTTCTAGG+TGG - chr1_3:34944494-34944513 Msa0116080:intron 60.0%
CCCTGCCCGAGATTCCTGAA+TGG - chr1_3:34944615-34944634 Msa0116080:CDS 60.0%
GCTGGGAACCGCTTGTCATG+TGG - chr1_3:34945038-34945057 Msa0116080:intron 60.0%
GGGAGGGAGGGAGAGTCAAA+GGG + chr1_3:34948766-34948785 None:intergenic 60.0%
GAGAGAGAGAGAGAGGGGGA+GGG + chr1_3:34948782-34948801 None:intergenic 60.0%
AGAGAGAGAGAGAGAGGGGG+AGG + chr1_3:34948783-34948802 None:intergenic 60.0%
TAGGCCCCTGACAGACCTTC+TGG + chr1_3:34951633-34951652 None:intergenic 60.0%
GAAGGTCTGTCAGGGGCCTA+TGG - chr1_3:34951633-34951652 Msa0116080:intron 60.0%
TCTGTCAGGGGCCTATGGTC+CGG - chr1_3:34951638-34951657 Msa0116080:intron 60.0%
!! ACTTGGTGCGGACAACCAGC+TGG + chr1_3:34952983-34953002 None:intergenic 60.0%
GGGGAGGGAGGGAGAGTCAA+AGG + chr1_3:34948767-34948786 None:intergenic 65.0%
GAGAGAGAGAGGGGGAGGGA+GGG + chr1_3:34948778-34948797 None:intergenic 65.0%
AGAGAGAGAGAGGGGGAGGG+AGG + chr1_3:34948779-34948798 None:intergenic 65.0%
TCGGGCAGGGCAGCAGCACG+AGG + chr1_3:34944605-34944624 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 34942175 34955243 34942175 ID=Msa0116080;Name=Msa0116080
chr1_3 mRNA 34942175 34955243 34942175 ID=Msa0116080-mRNA-1;Parent=Msa0116080;Name=Msa0116080-mRNA-1;_AED=0.13;_eAED=0.14;_QI=92|0.78|0.73|1|1|1|15|0|1134
chr1_3 exon 34942175 34942218 34942175 ID=Msa0116080-mRNA-1:exon:11165;Parent=Msa0116080-mRNA-1
chr1_3 exon 34942501 34942588 34942501 ID=Msa0116080-mRNA-1:exon:11164;Parent=Msa0116080-mRNA-1
chr1_3 exon 34943353 34943472 34943353 ID=Msa0116080-mRNA-1:exon:11163;Parent=Msa0116080-mRNA-1
chr1_3 exon 34944403 34944488 34944403 ID=Msa0116080-mRNA-1:exon:11162;Parent=Msa0116080-mRNA-1
chr1_3 exon 34944587 34944659 34944587 ID=Msa0116080-mRNA-1:exon:11161;Parent=Msa0116080-mRNA-1
chr1_3 exon 34946583 34946693 34946583 ID=Msa0116080-mRNA-1:exon:11160;Parent=Msa0116080-mRNA-1
chr1_3 exon 34946831 34946935 34946831 ID=Msa0116080-mRNA-1:exon:11159;Parent=Msa0116080-mRNA-1
chr1_3 exon 34950167 34950499 34950167 ID=Msa0116080-mRNA-1:exon:11158;Parent=Msa0116080-mRNA-1
chr1_3 exon 34950986 34951315 34950986 ID=Msa0116080-mRNA-1:exon:11157;Parent=Msa0116080-mRNA-1
chr1_3 exon 34952277 34953012 34952277 ID=Msa0116080-mRNA-1:exon:11156;Parent=Msa0116080-mRNA-1
chr1_3 exon 34953091 34953154 34953091 ID=Msa0116080-mRNA-1:exon:11155;Parent=Msa0116080-mRNA-1
chr1_3 exon 34953446 34953584 34953446 ID=Msa0116080-mRNA-1:exon:11154;Parent=Msa0116080-mRNA-1
chr1_3 exon 34953666 34953765 34953666 ID=Msa0116080-mRNA-1:exon:11153;Parent=Msa0116080-mRNA-1
chr1_3 exon 34953956 34954071 34953956 ID=Msa0116080-mRNA-1:exon:11152;Parent=Msa0116080-mRNA-1
chr1_3 exon 34954192 34955243 34954192 ID=Msa0116080-mRNA-1:exon:11151;Parent=Msa0116080-mRNA-1
chr1_3 five_prime_UTR 34955152 34955243 34955152 ID=Msa0116080-mRNA-1:five_prime_utr;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34954192 34955151 34954192 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34953956 34954071 34953956 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34953666 34953765 34953666 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34953446 34953584 34953446 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34953091 34953154 34953091 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34952277 34953012 34952277 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34950986 34951315 34950986 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34950167 34950499 34950167 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34946831 34946935 34946831 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34946583 34946693 34946583 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34944587 34944659 34944587 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34944403 34944488 34944403 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34943353 34943472 34943353 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34942501 34942588 34942501 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
chr1_3 CDS 34942175 34942218 34942175 ID=Msa0116080-mRNA-1:cds;Parent=Msa0116080-mRNA-1
Gene Sequence

>Msa0116080

ATGGCGGGTGAAGAAAACAACACTGGTGCTGAAACGGTGCCGTTAAAGGTTGATGACGTGGCACAAGAATCAGTTCCTGATCGTGAAAAACAAGCTATTGTCTCCGAAACGGCGTCGTTGAAGGACGATTTAGCTTCTGATGAAGGTGATGACGTGGCAGCCGAAGATTCTTCTTCCGTTAAAGTGATAAGAAAATACGGTAGAAGGAAAAAGAAACCAGGAAGAAAGAGTAAGGCTGAAATCGAGAAGGAGAAGACGGAGGAAGCGTTTGAGAACGGAACAAAGGAAGAAACGAGTAAAGGTGATGATGACATGGCAGCCGGAAACTCTATTTCCGTTCATGCCACTCCGGCAAAGAAACGCGGTAGAAATACAAAAACCGAAAAGGAAAATAAAACAGGGGAAGGTGCTGATGTGGTAGGAGGGTTTTCTTCTGTTGGCGTGAGGAAGAGTGAAAGGCCTAGGAAGATTAAATCATTGAATGAAGATTACTTGTCGGATTTGGATGAGGCTGTGAAGAAAAAGGGGAAACGTGGTAGGAAGAAGAAGGTCATAATCGGTGTTTCTGATGAAAGTGATGAAGCTGAACATAAAGGGGAAAATGTGAAGACAGAGAAGAAGAAACCTGGTAGGAAAAGGAAGGAAATTTCTAGTTCTGGAGATGAAAATGAAGCTGAAAAAGAGGGAGTAAATGTCAAAAAAGAGGAAAAGAAAAAACCTGGTAGAAAAAAGAAGGTAAGTCATAATAGCTCTGAAGAAAATGATGAAGATGAACAAGATGGGGAAAATGGTAGAACTGTTAAGATTGAGGAGAATGAACTGACCAGTGAAAAGAATTTGGAGAGTAGTGTTTTATCCGATGATATTAAAGGTTATTCTTTAAGAACGGCTAAAAAAATCAAGCCTGAATGCATTGAACAGCATCAAACGGTCGCAAAGTTCAACAAGAGAAATTCTAAGTGGATCGAAGAGGAATCCTTGATGTGCCATCAATGTCAGAGAAATGACAAGGGCAGGGTTGTCAGATGTACAAAATGCAAACGGAAAAGATATTGCATACCCTGTTTAAACAATTGGTATCCTCACTTGAAAGAGGAGAAAATTGCTGAGGCATGTCCAGTGTGCTGTGGTAATTGCAATTGCAAAGCTTGCTTGCGATCATCTGTACTTATCAAGGAAATTAAAAATAAGACGGAAACCAACAACGACCATGACGTTGAGCTCTCCAAATATATGCTGAAAGTACTTCTTCCATATTTAAGACGTTTGGATGAAGAGCAAATGGCTGAGAAGGAGATAGAAGCAAAGAGACAAGGGCGCTCCCTTTCTGAGCTAAAAATAGAAGTTGCAGATATCCCTAAAAAGGAGCGTGTGTACTGTGACATCTGCAAAACGTCAATATTCGACTACCACAGAAGCTGTGCAAAATGCTCTTTTGACATTTGTCTCCTTTGTTGCTGTGAGCTTCGTGGCGGAAAGCTTCTAGGTGGTGCAGATCCAATTGAGTTTGAGTTTATCTTCCGAGGGCGTGATTATCTTCATGGTGGAAAAGAAGAGAGGGTAAAAAAAAAAGAACCTCGTGCTGCTGCCCTGCCCGAGATTCCTGAATGGTCAAGATCTGGGTGGCATGCAAATGATGATGGTAGCATTCCCTGTCCAAAAGCTGAAGGTGATGGTGATCATGGTGTCCTTGAACTGAGAAGCACACTTCCACCAAATTGCATCTCTGAGTTACTATGTAAAGCAAAAGAACTTGAAGCAACAATTGCGCTTCAAGATGCAAAAGAGACTTTTGATAGTTGGTGTTCTTGTTTAAAGCCTGTTAGGAATGAAGAGGATATACACAATAACACAAGGAAGGCAGCTTCTCGTGAAGATTCCAGTGATAACATTTTATACTGTCCCAGGGCTGTAAATCTACATAATGAGGATTTGCGACATTTTCAACGTCACTGGAGCAAAGGGGAGCCTGTAATTGTTAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCGCTTGTCATGTGGCGTGCATTCCGTCAGATAAGCAATACCAAGCACAAAACACTTTTGGATGTGAAAGCTATTGATTGCTTAGATTGGTGCGAGGGAGATATTAATGTGCACCAATTCTTTACTGGGTACACAAAAGGTCGCCCTGATTGGCTAAATTGGCCTCAGGTTTTGAAATTGAAAGATTGGCCTCCTTCTAACTTATTTGAAGAAAGTTTGCCTCGTCATTGTGCTGAGTTCATATCTTCCTTGCCCTATAAAGAATATACAGATCCTTTCAAAGGTGTTCTTAACCTTGCTGTGAAGTTGCCGGATGATGTTCTAAAGCCAGACATGGGCCCTAAAACATATATTGCTTATGGATTTGAGCAGGAACTTGGGCGGGGTGATTCTGTGACTAAGCTTCATTGTGATATGTCTGATGCAGTAAATGTGCTGACTCATATTGCTGAAGTGAAATTGAAATCTGAGGGCATTACTGCCATTAAGAAACTGACACAAAAGCACCGTGAGCAAGACAAGAGGGAGCTACATGGCGATAATCAGGATGGAGAGACCACTATCATGCTTGATAATTCATCTTCTTCCATAAATGCTTCAGACGAAAAAAATTGCGTTCCAGTCATGGAAAATGGGGGTGATTCCTTAGACGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTTCCTAAGTTGGAGGAATATTTAAAGAAGCATTTCAGAGAGTTCAGGCATGTCCACTGCTCTCCTTTAAAGCAGGTTTACACCAAGAAAAGGAACTATTTGAAACAAAATACCATGAATGATTTTGTGTATGTAATGGCCAACTCAAGATTCGGGAGAAGTGGAGAAGAAATCAAATGGCTGCGCATGAAAGATGAATTTGAAGAAAGTAATCGTCAACAAGGTGGAGAAGATGACGTTGTTGATGAGGATGAATTATTAATTTTATGGAGGATGATCGATCTGATTGGCGTTATTCACCCCATCCATGATCAGCACTTTTATTTGACTATCGAGCATAAGAGGAGGCTTAAGGAGGAGTATGGAATTGAACCTTGGACTTTTTTCCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCGCACCAAGTCCGAAATCTGAAGTCATGCACCAAGGTTGCTCTTGATTTTGTGTCTCCTGAAAATGTTGGCGAGTGCTTTCGTTTGACAGAGGAATTCCGTAAACTTCCGGTAAATCACAGGTCCACAGAGGACAAATTGGAGGTGAAGAAAATGATTATATATGCTATGCTTGATCTGGTGGAGAAGTTGGAGGAAGCAAGGTTAGTGGTTGCAAACTTCACGCCCTCTGCTGTAGGAAAGAATCCATATTTTGTTATGTCTGGCACACCTTGA
Protein sequence

>Msa0116080

MAGEENNTGAETVPLKVDDVAQESVPDREKQAIVSETASLKDDLASDEGDDVAAEDSSSVKVIRKYGRRKKKPGRKSKAEIEKEKTEEAFENGTKEETSKGDDDMAAGNSISVHATPAKKRGRNTKTEKENKTGEGADVVGGFSSVGVRKSERPRKIKSLNEDYLSDLDEAVKKKGKRGRKKKVIIGVSDESDEAEHKGENVKTEKKKPGRKRKEISSSGDENEAEKEGVNVKKEEKKKPGRKKKVSHNSSEENDEDEQDGENGRTVKIEENELTSEKNLESSVLSDDIKGYSLRTAKKIKPECIEQHQTVAKFNKRNSKWIEEESLMCHQCQRNDKGRVVRCTKCKRKRYCIPCLNNWYPHLKEEKIAEACPVCCGNCNCKACLRSSVLIKEIKNKTETNNDHDVELSKYMLKVLLPYLRRLDEEQMAEKEIEAKRQGRSLSELKIEVADIPKKERVYCDICKTSIFDYHRSCAKCSFDICLLCCCELRGGKLLGGADPIEFEFIFRGRDYLHGGKEERVKKKEPRAAALPEIPEWSRSGWHANDDGSIPCPKAEGDGDHGVLELRSTLPPNCISELLCKAKELEATIALQDAKETFDSWCSCLKPVRNEEDIHNNTRKAASREDSSDNILYCPRAVNLHNEDLRHFQRHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRQISNTKHKTLLDVKAIDCLDWCEGDINVHQFFTGYTKGRPDWLNWPQVLKLKDWPPSNLFEESLPRHCAEFISSLPYKEYTDPFKGVLNLAVKLPDDVLKPDMGPKTYIAYGFEQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLKSEGITAIKKLTQKHREQDKRELHGDNQDGETTIMLDNSSSSINASDEKNCVPVMENGGDSLDGALWDIFRREDVPKLEEYLKKHFREFRHVHCSPLKQVYTKKRNYLKQNTMNDFVYVMANSRFGRSGEEIKWLRMKDEFEESNRQQGGEDDVVDEDELLILWRMIDLIGVIHPIHDQHFYLTIEHKRRLKEEYGIEPWTFFQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECFRLTEEFRKLPVNHRSTEDKLEVKKMIIYAMLDLVEKLEEARLVVANFTPSAVGKNPYFVMSGTP*