AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0717130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0717130 MtrunA17_Chr5g0404981 91.327 392 20 5 1 380 1 390 0.0 617
Msa0717130 MtrunA17_Chr8g0372291 50.000 326 112 9 52 362 1 290 7.22e-86 262
Msa0717130 MtrunA17_Chr4g0035891 40.401 349 128 10 55 380 5 296 9.16e-62 200
Msa0717130 MtrunA17_Chr3g0145121 40.373 322 137 10 55 361 5 286 3.55e-55 183
Msa0717130 MtrunA17_Chr3g0140331 38.966 290 130 8 85 360 67 323 8.74e-43 152
Msa0717130 MtrunA17_Chr1g0146231 43.612 227 97 7 144 360 99 304 1.20e-42 152
Msa0717130 MtrunA17_Chr8g0340401 41.810 232 83 6 142 359 102 295 1.15e-41 149
Msa0717130 MtrunA17_Chr1g0199671 38.306 248 104 9 148 356 71 308 1.04e-38 141
Msa0717130 MtrunA17_Chr1g0213161 41.150 226 104 6 150 358 9 222 1.47e-35 130
Msa0717130 MtrunA17_Chr7g0253101 41.284 218 100 6 155 354 45 252 4.39e-34 127
Msa0717130 MtrunA17_Chr6g0461591 36.820 239 95 8 155 354 35 256 9.45e-33 123
Msa0717130 MtrunA17_Chr1g0169431 71.233 73 21 0 290 362 172 244 1.90e-32 122
Msa0717130 MtrunA17_Chr4g0028961 68.421 76 22 1 289 362 231 306 3.06e-31 120
Msa0717130 MtrunA17_Chr2g0326771 57.447 94 40 0 261 354 187 280 7.87e-30 117
Msa0717130 MtrunA17_Chr5g0395391 67.123 73 24 0 290 362 270 342 1.64e-29 116
Msa0717130 MtrunA17_Chr5g0395391 68.750 64 20 0 290 353 168 231 9.61e-26 106
Msa0717130 MtrunA17_Chr7g0232671 46.341 82 44 0 270 351 167 248 1.42e-20 90.1
Msa0717130 MtrunA17_Chr7g0232701 54.839 62 28 0 290 351 73 134 2.28e-18 80.9
Msa0717130 MtrunA17_Chr7g0232681 53.226 62 29 0 290 351 132 193 6.84e-18 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0717130 AT5G66320.2 43.895 344 167 6 56 380 3 339 2.04e-71 227
Msa0717130 AT5G66320.1 43.895 344 167 6 56 380 3 339 2.04e-71 227
Msa0717130 AT3G51080.1 48.538 342 133 14 52 380 1 312 1.61e-67 216
Msa0717130 AT4G36240.1 44.404 277 91 9 89 357 10 231 2.19e-54 179
Msa0717130 AT4G32890.1 36.972 284 134 9 88 359 16 266 1.01e-45 159
Msa0717130 AT5G25830.1 38.947 285 151 9 89 359 13 288 1.46e-45 159
Msa0717130 AT4G34680.1 38.487 304 122 8 58 359 9 249 5.80e-41 145
Msa0717130 AT4G34680.2 38.487 304 122 8 58 359 9 249 5.80e-41 145
Msa0717130 AT3G60530.1 42.396 217 71 6 142 358 64 226 3.60e-39 140
Msa0717130 AT2G45050.1 40.254 236 70 8 143 360 67 249 1.06e-38 139
Msa0717130 AT3G24050.1 70.667 75 19 1 282 356 189 260 2.89e-33 125
Msa0717130 AT3G54810.1 74.286 70 18 0 288 357 227 296 1.16e-31 122
Msa0717130 AT3G54810.2 74.286 70 18 0 288 357 227 296 1.16e-31 122
Msa0717130 AT1G08010.2 72.464 69 19 0 290 358 220 288 4.03e-31 120
Msa0717130 AT1G08010.1 72.464 69 19 0 290 358 220 288 4.03e-31 120
Msa0717130 AT1G08010.3 72.464 69 19 0 290 358 220 288 4.03e-31 120
Msa0717130 AT1G08000.2 60.920 87 27 1 290 376 218 297 2.46e-29 115
Msa0717130 AT1G08000.1 60.920 87 27 1 290 376 218 297 2.46e-29 115
Msa0717130 AT3G45170.1 67.164 67 22 0 292 358 117 183 8.17e-29 111
Msa0717130 AT2G28340.1 66.154 65 22 0 292 356 193 257 2.54e-25 104
Msa0717130 AT2G18380.1 59.091 44 16 1 279 322 83 124 7.30e-11 61.6

Find 109 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCGTTGAAAACCAGTTTA+AGG 0.224198 5_1:+10756428 Msa0717130:CDS
AGTGTTCTTGTTCTTCTTCT+TGG 0.233910 5_1:-10756573 None:intergenic
GCCGCATTTCAAGCACTTTC+CGG 0.262078 5_1:-10757450 None:intergenic
TGTTAGGGTTTGAAGTTTCA+TGG 0.286423 5_1:-10756621 None:intergenic
TCAAGGTGGTGCGCTGGTTA+TGG 0.302812 5_1:+10757243 Msa0717130:CDS
TGCGGTAGGTTAGGTTAATT+AGG 0.304925 5_1:+10757695 Msa0717130:three_prime_UTR
TTGAGAGAGAGAGTGGTGTT+AGG 0.311796 5_1:-10756637 None:intergenic
AGAGAAGAGGATAGGAAGTT+TGG 0.315573 5_1:-10756169 None:intergenic
AGTTATGTCTTTCCTTAAAC+TGG 0.323165 5_1:-10756440 None:intergenic
GAGTGATGATGTAGCGGATT+TGG 0.332967 5_1:+10756853 Msa0717130:intron
GGAGTTAGGGTTTGGCCATT+CGG 0.338619 5_1:+10757061 Msa0717130:CDS
AAAGAGCCAGAACCGGAGTT+AGG 0.338637 5_1:+10757047 Msa0717130:CDS
TCAGTCCTCAATGCACAAAA+TGG 0.339657 5_1:+10756487 Msa0717130:CDS
TGAGAGAGAGAGTGGTGTTA+GGG 0.347258 5_1:-10756636 None:intergenic
CCAAACCCTAACTCCGGTTC+TGG 0.373049 5_1:-10757053 None:intergenic
CTTCTAGCTTTGGTTTGAAC+CGG 0.384987 5_1:-10757022 None:intergenic
GTTGAAATTGAAGTTGAAAC+TGG 0.389926 5_1:+10757496 Msa0717130:CDS
GAAGATACTGATTCCTTCTC+TGG 0.390652 5_1:+10756896 Msa0717130:CDS
GAGTTAGGGTTTGGCCATTC+GGG 0.398916 5_1:+10757062 Msa0717130:CDS
ACTAGGAACAACCGGAGAAC+GGG 0.415441 5_1:-10757524 None:intergenic
TGTATTGAGTGCGGTAGGTT+AGG 0.418208 5_1:+10757686 Msa0717130:three_prime_UTR
CCAGAACCGGAGTTAGGGTT+TGG 0.426023 5_1:+10757053 Msa0717130:CDS
TAACTCGGGTCCCATTGAAC+CGG 0.428789 5_1:-10757641 None:intergenic
ATGTGGGGTCCGTTTCAAAT+CGG 0.430277 5_1:+10757357 Msa0717130:CDS
AACTGGTATGTCCCGTTCTC+CGG 0.445008 5_1:+10757513 Msa0717130:CDS
TTTCAAGCACTTTCCGGTGG+TGG 0.445128 5_1:-10757444 None:intergenic
CATGTTGGTGTAAATCAGTA+AGG 0.448804 5_1:-10757155 None:intergenic
TGTGGGGTCCGTTTCAAATC+GGG 0.450070 5_1:+10757358 Msa0717130:CDS
AGAAAATACCTTCTTCTAAC+GGG 0.463060 5_1:+10757215 Msa0717130:CDS
AGAAGCAAAAGAGCCAGAAC+CGG 0.467532 5_1:+10757040 Msa0717130:CDS
TTATAGTAATAATAAATCCT+TGG 0.467588 5_1:+10756118 Msa0717130:five_prime_UTR
ATTTCATCAACAAATGTTTG+AGG 0.469386 5_1:-10756463 None:intergenic
TTTGGTAAAGCATTGAATGA+AGG 0.471624 5_1:-10756151 None:intergenic
CGGAACGTTGAGTTCGTTGG+TGG 0.479405 5_1:-10756680 None:intergenic
GGGAAGAGAGAGAAAGAAAC+GGG 0.479630 5_1:+10756091 None:intergenic
TAAATCAGTAAGGGACTAGT+TGG 0.479787 5_1:-10757145 None:intergenic
GTCGGGTCAAGGTGGTGCGC+TGG 0.483548 5_1:+10757237 Msa0717130:CDS
CAGTGGAGAAGTGGACCCCT+TGG 0.483789 5_1:+10757313 Msa0717130:CDS
CGGCGGAAGAAGGAGGTTGT+TGG 0.485331 5_1:+10757469 Msa0717130:CDS
TACTGATTCCTTCTCTGGAA+TGG 0.486449 5_1:+10756901 Msa0717130:CDS
GGGACTAGTTGGAGATGAAG+AGG 0.488850 5_1:-10757134 None:intergenic
TCTTCTAACGGGTCGGGTCA+AGG 0.492580 5_1:+10757226 Msa0717130:CDS
TACCGGAACGTTGAGTTCGT+TGG 0.498859 5_1:-10756683 None:intergenic
TTGGTAAAGCATTGAATGAA+GGG 0.499651 5_1:-10756150 None:intergenic
TTATGGCGGCGCCACCGCGA+CGG 0.501029 5_1:+10757260 Msa0717130:CDS
GCTACAAGCGGGTCGATACT+CGG 0.502192 5_1:-10757392 None:intergenic
AAGAGCCAGAACCGGAGTTA+GGG 0.503861 5_1:+10757048 Msa0717130:CDS
GCTTGAAATGCGGCGGAAGA+AGG 0.509175 5_1:+10757459 Msa0717130:CDS
ATACCTTCTTCTAACGGGTC+GGG 0.512415 5_1:+10757220 Msa0717130:CDS
TGTTAAAGCCATTCCAGAGA+AGG 0.512505 5_1:-10756909 None:intergenic
TGCAATTCACTTGAAAATGT+AGG 0.512664 5_1:-10757415 None:intergenic
GCAATTCACTTGAAAATGTA+GGG 0.516502 5_1:-10757414 None:intergenic
CACCAACGAACTCAACGTTC+CGG 0.517043 5_1:+10756681 Msa0717130:CDS
AAGAAAATACCTTCTTCTAA+CGG 0.532786 5_1:+10757214 Msa0717130:CDS
CGGAAGAAGGAGGTTGTTGG+TGG 0.534340 5_1:+10757472 Msa0717130:CDS
TGAAGATGAAGTTGTGGTGG+TGG 0.540481 5_1:-10757110 None:intergenic
CTACAAGCGGGTCGATACTC+GGG 0.540871 5_1:-10757391 None:intergenic
AACCTACCGCACTCAATACA+AGG 0.543060 5_1:-10757683 None:intergenic
AACTAGGAACAACCGGAGAA+CGG 0.545023 5_1:-10757525 None:intergenic
GTCAAAACTTTGAAGCATGT+TGG 0.552102 5_1:-10757170 None:intergenic
AAGACTCCTCAGTGGAGAAG+TGG 0.555433 5_1:+10757304 Msa0717130:CDS
ACAACCGACCCGATTTGAAA+CGG 0.558005 5_1:-10757366 None:intergenic
AATACCTGTGAGTGAGGATG+AGG 0.559728 5_1:-10756281 None:intergenic
AATACCTTCTTCTAACGGGT+CGG 0.563299 5_1:+10757219 Msa0717130:CDS
AAATTGAAAGAGAAGAGGAT+AGG 0.565462 5_1:-10756177 None:intergenic
TGAAAATGTAGGGCTACAAG+CGG 0.567317 5_1:-10757404 None:intergenic
GGTTGAGCTTGAAGAAGAAT+CGG 0.569217 5_1:-10757089 None:intergenic
AGGTGGTGCGCTGGTTATGG+CGG 0.571286 5_1:+10757246 Msa0717130:CDS
GGATGAAATTGAAAGAGAAG+AGG 0.572683 5_1:-10756182 None:intergenic
TTCCTTGTATTGAGTGCGGT+AGG 0.572932 5_1:+10757681 Msa0717130:three_prime_UTR
TATGGTTGAGAGAGGAATGG+TGG 0.573956 5_1:-10756219 None:intergenic
AAAACACTTTGCAATGCATG+TGG 0.576908 5_1:+10757340 Msa0717130:CDS
ATCTTCTTTGAGAGAGAGAG+TGG 0.577619 5_1:-10756644 None:intergenic
ATGAAGGGTGAAAGCGTCCA+AGG 0.577956 5_1:-10756135 None:intergenic
TGACCCGACCCGTTAGAAGA+AGG 0.580832 5_1:-10757223 None:intergenic
TCTTCCTCATCCTCACTCAC+AGG 0.581283 5_1:+10756277 Msa0717130:CDS
GAAGAATCGGTTGACCCGAA+TGG 0.581552 5_1:-10757076 None:intergenic
AACTCGGGTCCCATTGAACC+GGG 0.583930 5_1:-10757640 None:intergenic
AACACTTTGCAATGCATGTG+GGG 0.584364 5_1:+10757342 Msa0717130:CDS
AGTAATAATACCTGTGAGTG+AGG 0.585394 5_1:-10756287 None:intergenic
AAACACTTTGCAATGCATGT+GGG 0.595953 5_1:+10757341 Msa0717130:CDS
TGGGTTCTTCAAACACAACA+AGG 0.596693 5_1:-10756958 None:intergenic
CCGCGACGGTGCAGTCATTG+TGG 0.597226 5_1:+10757274 Msa0717130:CDS
GGAACGTTGAGTTCGTTGGT+GGG 0.602465 5_1:-10756679 None:intergenic
AATTGCACTCAAACCACCAC+CGG 0.603688 5_1:+10757431 Msa0717130:CDS
ACCGGAAAGTGCTTGAAATG+CGG 0.610851 5_1:+10757449 Msa0717130:CDS
CAATGACTGCACCGTCGCGG+TGG 0.613617 5_1:-10757271 None:intergenic
GAAAATGTAGGGCTACAAGC+GGG 0.617357 5_1:-10757403 None:intergenic
CAAGCCGAAACAAGAAAACC+CGG 0.618171 5_1:+10756979 Msa0717130:CDS
TGAAATGCGGCGGAAGAAGG+AGG 0.618269 5_1:+10757462 Msa0717130:CDS
ATGATGTAGCGGATTTGGAA+TGG 0.620800 5_1:+10756858 Msa0717130:CDS
TTTCTTCCTTGTATTGAGTG+CGG 0.621569 5_1:+10757677 Msa0717130:three_prime_UTR
TGTACAGAGTGATGATGTAG+CGG 0.627905 5_1:+10756847 Msa0717130:intron
GGGTCCGTTTCAAATCGGGT+CGG 0.636088 5_1:+10757362 Msa0717130:CDS
GCATTTCAAGCACTTTCCGG+TGG 0.641487 5_1:-10757447 None:intergenic
ATGTTGGTGTAAATCAGTAA+GGG 0.645408 5_1:-10757154 None:intergenic
CAACGTGAGAGAAGTCAAGA+AGG 0.648494 5_1:-10756540 None:intergenic
TGATATGGTTGAGAGAGGAA+TGG 0.652477 5_1:-10756222 None:intergenic
GAAACTGATATGGTTGAGAG+AGG 0.655208 5_1:-10756227 None:intergenic
GAATGGCCAAACCCTAACTC+CGG 0.661642 5_1:-10757059 None:intergenic
GGAAAGTGCTTGAAATGCGG+CGG 0.671374 5_1:+10757452 Msa0717130:CDS
CCACAATGACTGCACCGTCG+CGG 0.674443 5_1:-10757274 None:intergenic
GGTTGAAGATGAAGTTGTGG+TGG 0.679785 5_1:-10757113 None:intergenic
AGAGGTTGAAGATGAAGTTG+TGG 0.694243 5_1:-10757116 None:intergenic
AATGGCTTTAACAACAACAA+CGG 0.712114 5_1:+10756919 Msa0717130:CDS
TCTAACGGGTCGGGTCAAGG+TGG 0.717376 5_1:+10757229 Msa0717130:CDS
GTGTAACAAAGACTCCTCAG+TGG 0.731260 5_1:+10757296 Msa0717130:CDS
ATGGTGGAAGAAGAATGCAA+AGG 0.739289 5_1:-10756203 None:intergenic
AGGGGTCCACTTCTCCACTG+AGG 0.747563 5_1:-10757310 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATAAAAAATTTGTTAC+CGG - chr5_1:10756703-10756722 None:intergenic 10.0%
!! ATAATAATTAATCAAAAACT+AGG - chr5_1:10757544-10757563 None:intergenic 10.0%
!!! AAAAATAAAAAATTTGTTAC+CGG - chr5_1:10756703-10756722 None:intergenic 10.0%
!! ATAATAATTAATCAAAAACT+AGG - chr5_1:10757544-10757563 None:intergenic 10.0%
!! TTATAGTAATAATAAATCCT+TGG + chr5_1:10756118-10756137 Msa0717130:five_prime_UTR 15.0%
!! AGGTTTATAATAAATATTGT+CGG - chr5_1:10756738-10756757 None:intergenic 15.0%
!!! AAAAAAAATGTTTTTTGTGT+TGG + chr5_1:10756798-10756817 Msa0717130:intron 15.0%
!!! AAAAAAATGTTTTTTGTGTT+GGG + chr5_1:10756799-10756818 Msa0717130:intron 15.0%
!! AAATTTATGAAGAAAAAAAG+AGG + chr5_1:10757574-10757593 Msa0717130:three_prime_UTR 15.0%
!! AGAAAAAAATTAGATAGAAA+TGG + chr5_1:10757601-10757620 Msa0717130:three_prime_UTR 15.0%
!! TTATAGTAATAATAAATCCT+TGG + chr5_1:10756118-10756137 Msa0717130:five_prime_UTR 15.0%
!! AGGTTTATAATAAATATTGT+CGG - chr5_1:10756738-10756757 None:intergenic 15.0%
!!! AAAAAAAATGTTTTTTGTGT+TGG + chr5_1:10756798-10756817 Msa0717130:intron 15.0%
!!! AAAAAAATGTTTTTTGTGTT+GGG + chr5_1:10756799-10756818 Msa0717130:intron 15.0%
!! AAATTTATGAAGAAAAAAAG+AGG + chr5_1:10757574-10757593 Msa0717130:three_prime_UTR 15.0%
!! AGAAAAAAATTAGATAGAAA+TGG + chr5_1:10757601-10757620 Msa0717130:three_prime_UTR 15.0%
!!! TTGTTTTGTTTTGTTTTGTT+AGG + chr5_1:10756375-10756394 Msa0717130:intron 20.0%
!!! ACATAGTTTCGATTTTTTTA+AGG - chr5_1:10756758-10756777 None:intergenic 20.0%
!!! TTGTTTTGTTTTGTTTTGTT+AGG + chr5_1:10756375-10756394 Msa0717130:intron 20.0%
!!! ACATAGTTTCGATTTTTTTA+AGG - chr5_1:10756758-10756777 None:intergenic 20.0%
! ATTTCATCAACAAATGTTTG+AGG - chr5_1:10756466-10756485 None:intergenic 25.0%
!!! TTTTGAAAGTAGTAAAAACC+GGG - chr5_1:10757000-10757019 None:intergenic 25.0%
!!! GTTTTGAAAGTAGTAAAAAC+CGG - chr5_1:10757001-10757020 None:intergenic 25.0%
!! TTTTACTACTTTCAAAACAC+CGG + chr5_1:10757003-10757022 Msa0717130:CDS 25.0%
!!! TTAGAAGAAGGTATTTTCTT+CGG - chr5_1:10757214-10757233 None:intergenic 25.0%
! AAGAAAATACCTTCTTCTAA+CGG + chr5_1:10757214-10757233 Msa0717130:CDS 25.0%
! AAAAAATGTGTACACTAACT+CGG - chr5_1:10757659-10757678 None:intergenic 25.0%
! ATTTCATCAACAAATGTTTG+AGG - chr5_1:10756466-10756485 None:intergenic 25.0%
!!! TTTTGAAAGTAGTAAAAACC+GGG - chr5_1:10757000-10757019 None:intergenic 25.0%
!!! GTTTTGAAAGTAGTAAAAAC+CGG - chr5_1:10757001-10757020 None:intergenic 25.0%
!! TTTTACTACTTTCAAAACAC+CGG + chr5_1:10757003-10757022 Msa0717130:CDS 25.0%
!!! TTAGAAGAAGGTATTTTCTT+CGG - chr5_1:10757214-10757233 None:intergenic 25.0%
! AAGAAAATACCTTCTTCTAA+CGG + chr5_1:10757214-10757233 Msa0717130:CDS 25.0%
! AAAAAATGTGTACACTAACT+CGG - chr5_1:10757659-10757678 None:intergenic 25.0%
!! TTGGTAAAGCATTGAATGAA+GGG - chr5_1:10756153-10756172 None:intergenic 30.0%
!! TTTGGTAAAGCATTGAATGA+AGG - chr5_1:10756154-10756173 None:intergenic 30.0%
AAATTGAAAGAGAAGAGGAT+AGG - chr5_1:10756180-10756199 None:intergenic 30.0%
! TTTTTGTGGTGAAACTGATA+TGG - chr5_1:10756240-10756259 None:intergenic 30.0%
! GAAAAGAGAGAAAGTTTTTG+TGG - chr5_1:10756254-10756273 None:intergenic 30.0%
!! GTTTTGTTAGGCTTCAAAAA+CGG + chr5_1:10756387-10756406 Msa0717130:intron 30.0%
AGTTATGTCTTTCCTTAAAC+TGG - chr5_1:10756443-10756462 None:intergenic 30.0%
! AGTTTCATGGTTTTCTTTGA+GGG - chr5_1:10756611-10756630 None:intergenic 30.0%
! AAGTTTCATGGTTTTCTTTG+AGG - chr5_1:10756612-10756631 None:intergenic 30.0%
!! AATGGCTTTAACAACAACAA+CGG + chr5_1:10756919-10756938 Msa0717130:CDS 30.0%
ATGTTGGTGTAAATCAGTAA+GGG - chr5_1:10757157-10757176 None:intergenic 30.0%
AGAAAATACCTTCTTCTAAC+GGG + chr5_1:10757215-10757234 Msa0717130:CDS 30.0%
GCAATTCACTTGAAAATGTA+GGG - chr5_1:10757417-10757436 None:intergenic 30.0%
TGCAATTCACTTGAAAATGT+AGG - chr5_1:10757418-10757437 None:intergenic 30.0%
GTTGAAATTGAAGTTGAAAC+TGG + chr5_1:10757496-10757515 Msa0717130:CDS 30.0%
AATCAAAAACTAGGAACAAC+CGG - chr5_1:10757535-10757554 None:intergenic 30.0%
AAAAATGTGTACACTAACTC+GGG - chr5_1:10757658-10757677 None:intergenic 30.0%
! TTAGGCTTTTGTAACTGTTT+AGG + chr5_1:10757713-10757732 Msa0717130:three_prime_UTR 30.0%
!! TTGGTAAAGCATTGAATGAA+GGG - chr5_1:10756153-10756172 None:intergenic 30.0%
!! TTTGGTAAAGCATTGAATGA+AGG - chr5_1:10756154-10756173 None:intergenic 30.0%
AAATTGAAAGAGAAGAGGAT+AGG - chr5_1:10756180-10756199 None:intergenic 30.0%
! TTTTTGTGGTGAAACTGATA+TGG - chr5_1:10756240-10756259 None:intergenic 30.0%
! GAAAAGAGAGAAAGTTTTTG+TGG - chr5_1:10756254-10756273 None:intergenic 30.0%
!! GTTTTGTTAGGCTTCAAAAA+CGG + chr5_1:10756387-10756406 Msa0717130:intron 30.0%
AGTTATGTCTTTCCTTAAAC+TGG - chr5_1:10756443-10756462 None:intergenic 30.0%
! AGTTTCATGGTTTTCTTTGA+GGG - chr5_1:10756611-10756630 None:intergenic 30.0%
! AAGTTTCATGGTTTTCTTTG+AGG - chr5_1:10756612-10756631 None:intergenic 30.0%
!! AATGGCTTTAACAACAACAA+CGG + chr5_1:10756919-10756938 Msa0717130:CDS 30.0%
ATGTTGGTGTAAATCAGTAA+GGG - chr5_1:10757157-10757176 None:intergenic 30.0%
AGAAAATACCTTCTTCTAAC+GGG + chr5_1:10757215-10757234 Msa0717130:CDS 30.0%
GCAATTCACTTGAAAATGTA+GGG - chr5_1:10757417-10757436 None:intergenic 30.0%
TGCAATTCACTTGAAAATGT+AGG - chr5_1:10757418-10757437 None:intergenic 30.0%
GTTGAAATTGAAGTTGAAAC+TGG + chr5_1:10757496-10757515 Msa0717130:CDS 30.0%
AATCAAAAACTAGGAACAAC+CGG - chr5_1:10757535-10757554 None:intergenic 30.0%
AAAAATGTGTACACTAACTC+GGG - chr5_1:10757658-10757677 None:intergenic 30.0%
! TTAGGCTTTTGTAACTGTTT+AGG + chr5_1:10757713-10757732 Msa0717130:three_prime_UTR 30.0%
GGATGAAATTGAAAGAGAAG+AGG - chr5_1:10756185-10756204 None:intergenic 35.0%
AGTAATAATACCTGTGAGTG+AGG - chr5_1:10756290-10756309 None:intergenic 35.0%
TTAGGCTTCAAAAACGGAAA+TGG + chr5_1:10756393-10756412 Msa0717130:intron 35.0%
! TTGTTCCATTTTGTGCATTG+AGG - chr5_1:10756495-10756514 None:intergenic 35.0%
AGTGTTCTTGTTCTTCTTCT+TGG - chr5_1:10756576-10756595 None:intergenic 35.0%
! TGTTAGGGTTTGAAGTTTCA+TGG - chr5_1:10756624-10756643 None:intergenic 35.0%
! CAAACACAACAAGGCTTTTA+GGG - chr5_1:10756952-10756971 None:intergenic 35.0%
! TCAAACACAACAAGGCTTTT+AGG - chr5_1:10756953-10756972 None:intergenic 35.0%
!! AAAACCGGGTTTTCTTGTTT+CGG - chr5_1:10756986-10757005 None:intergenic 35.0%
! TAAATCAGTAAGGGACTAGT+TGG - chr5_1:10757148-10757167 None:intergenic 35.0%
CATGTTGGTGTAAATCAGTA+AGG - chr5_1:10757158-10757177 None:intergenic 35.0%
!! GTCAAAACTTTGAAGCATGT+TGG - chr5_1:10757173-10757192 None:intergenic 35.0%
!!! CATGCTTCAAAGTTTTGACT+CGG + chr5_1:10757174-10757193 Msa0717130:CDS 35.0%
!!! TCAAAGTTTTGACTCGGTTA+AGG + chr5_1:10757180-10757199 Msa0717130:CDS 35.0%
AAAACACTTTGCAATGCATG+TGG + chr5_1:10757340-10757359 Msa0717130:CDS 35.0%
AAACACTTTGCAATGCATGT+GGG + chr5_1:10757341-10757360 Msa0717130:CDS 35.0%
TTTCTTCCTTGTATTGAGTG+CGG + chr5_1:10757677-10757696 Msa0717130:three_prime_UTR 35.0%
GGATGAAATTGAAAGAGAAG+AGG - chr5_1:10756185-10756204 None:intergenic 35.0%
AGTAATAATACCTGTGAGTG+AGG - chr5_1:10756290-10756309 None:intergenic 35.0%
TTAGGCTTCAAAAACGGAAA+TGG + chr5_1:10756393-10756412 Msa0717130:intron 35.0%
! TTGTTCCATTTTGTGCATTG+AGG - chr5_1:10756495-10756514 None:intergenic 35.0%
AGTGTTCTTGTTCTTCTTCT+TGG - chr5_1:10756576-10756595 None:intergenic 35.0%
! TGTTAGGGTTTGAAGTTTCA+TGG - chr5_1:10756624-10756643 None:intergenic 35.0%
! CAAACACAACAAGGCTTTTA+GGG - chr5_1:10756952-10756971 None:intergenic 35.0%
! TCAAACACAACAAGGCTTTT+AGG - chr5_1:10756953-10756972 None:intergenic 35.0%
!! AAAACCGGGTTTTCTTGTTT+CGG - chr5_1:10756986-10757005 None:intergenic 35.0%
! TAAATCAGTAAGGGACTAGT+TGG - chr5_1:10757148-10757167 None:intergenic 35.0%
CATGTTGGTGTAAATCAGTA+AGG - chr5_1:10757158-10757177 None:intergenic 35.0%
!! GTCAAAACTTTGAAGCATGT+TGG - chr5_1:10757173-10757192 None:intergenic 35.0%
!!! CATGCTTCAAAGTTTTGACT+CGG + chr5_1:10757174-10757193 Msa0717130:CDS 35.0%
!!! TCAAAGTTTTGACTCGGTTA+AGG + chr5_1:10757180-10757199 Msa0717130:CDS 35.0%
AAAACACTTTGCAATGCATG+TGG + chr5_1:10757340-10757359 Msa0717130:CDS 35.0%
AAACACTTTGCAATGCATGT+GGG + chr5_1:10757341-10757360 Msa0717130:CDS 35.0%
TTTCTTCCTTGTATTGAGTG+CGG + chr5_1:10757677-10757696 Msa0717130:three_prime_UTR 35.0%
AGAGAAGAGGATAGGAAGTT+TGG - chr5_1:10756172-10756191 None:intergenic 40.0%
! ATGGTGGAAGAAGAATGCAA+AGG - chr5_1:10756206-10756225 None:intergenic 40.0%
TGATATGGTTGAGAGAGGAA+TGG - chr5_1:10756225-10756244 None:intergenic 40.0%
GAAACTGATATGGTTGAGAG+AGG - chr5_1:10756230-10756249 None:intergenic 40.0%
! CAGCGTTGAAAACCAGTTTA+AGG + chr5_1:10756428-10756447 Msa0717130:CDS 40.0%
TCAGTCCTCAATGCACAAAA+TGG + chr5_1:10756487-10756506 Msa0717130:CDS 40.0%
!! TTTTCTTTGAGGGAGAGACA+AGG - chr5_1:10756601-10756620 None:intergenic 40.0%
! ATCTTCTTTGAGAGAGAGAG+TGG - chr5_1:10756647-10756666 None:intergenic 40.0%
! TGTACAGAGTGATGATGTAG+CGG + chr5_1:10756847-10756866 Msa0717130:intron 40.0%
!! ATGATGTAGCGGATTTGGAA+TGG + chr5_1:10756858-10756877 Msa0717130:CDS 40.0%
!! GAAGATACTGATTCCTTCTC+TGG + chr5_1:10756896-10756915 Msa0717130:CDS 40.0%
!! TACTGATTCCTTCTCTGGAA+TGG + chr5_1:10756901-10756920 Msa0717130:CDS 40.0%
TGTTAAAGCCATTCCAGAGA+AGG - chr5_1:10756912-10756931 None:intergenic 40.0%
TGGGTTCTTCAAACACAACA+AGG - chr5_1:10756961-10756980 None:intergenic 40.0%
!! CTTCTAGCTTTGGTTTGAAC+CGG - chr5_1:10757025-10757044 None:intergenic 40.0%
GGTTGAGCTTGAAGAAGAAT+CGG - chr5_1:10757092-10757111 None:intergenic 40.0%
AGAGGTTGAAGATGAAGTTG+TGG - chr5_1:10757119-10757138 None:intergenic 40.0%
! AATACCTTCTTCTAACGGGT+CGG + chr5_1:10757219-10757238 Msa0717130:CDS 40.0%
!! CAAAGTGTTTTTGCTCCAAG+GGG - chr5_1:10757331-10757350 None:intergenic 40.0%
!! GCAAAGTGTTTTTGCTCCAA+GGG - chr5_1:10757332-10757351 None:intergenic 40.0%
!! TGCAAAGTGTTTTTGCTCCA+AGG - chr5_1:10757333-10757352 None:intergenic 40.0%
AACACTTTGCAATGCATGTG+GGG + chr5_1:10757342-10757361 Msa0717130:CDS 40.0%
TGAAAATGTAGGGCTACAAG+CGG - chr5_1:10757407-10757426 None:intergenic 40.0%
! AGATTTTAGACCCGGTTCAA+TGG + chr5_1:10757630-10757649 Msa0717130:three_prime_UTR 40.0%
! GATTTTAGACCCGGTTCAAT+GGG + chr5_1:10757631-10757650 Msa0717130:three_prime_UTR 40.0%
TGCGGTAGGTTAGGTTAATT+AGG + chr5_1:10757695-10757714 Msa0717130:three_prime_UTR 40.0%
AGAGAAGAGGATAGGAAGTT+TGG - chr5_1:10756172-10756191 None:intergenic 40.0%
! ATGGTGGAAGAAGAATGCAA+AGG - chr5_1:10756206-10756225 None:intergenic 40.0%
TGATATGGTTGAGAGAGGAA+TGG - chr5_1:10756225-10756244 None:intergenic 40.0%
GAAACTGATATGGTTGAGAG+AGG - chr5_1:10756230-10756249 None:intergenic 40.0%
! CAGCGTTGAAAACCAGTTTA+AGG + chr5_1:10756428-10756447 Msa0717130:CDS 40.0%
TCAGTCCTCAATGCACAAAA+TGG + chr5_1:10756487-10756506 Msa0717130:CDS 40.0%
!! TTTTCTTTGAGGGAGAGACA+AGG - chr5_1:10756601-10756620 None:intergenic 40.0%
! ATCTTCTTTGAGAGAGAGAG+TGG - chr5_1:10756647-10756666 None:intergenic 40.0%
! TGTACAGAGTGATGATGTAG+CGG + chr5_1:10756847-10756866 Msa0717130:intron 40.0%
!! ATGATGTAGCGGATTTGGAA+TGG + chr5_1:10756858-10756877 Msa0717130:CDS 40.0%
!! GAAGATACTGATTCCTTCTC+TGG + chr5_1:10756896-10756915 Msa0717130:CDS 40.0%
!! TACTGATTCCTTCTCTGGAA+TGG + chr5_1:10756901-10756920 Msa0717130:CDS 40.0%
TGTTAAAGCCATTCCAGAGA+AGG - chr5_1:10756912-10756931 None:intergenic 40.0%
TGGGTTCTTCAAACACAACA+AGG - chr5_1:10756961-10756980 None:intergenic 40.0%
!! CTTCTAGCTTTGGTTTGAAC+CGG - chr5_1:10757025-10757044 None:intergenic 40.0%
GGTTGAGCTTGAAGAAGAAT+CGG - chr5_1:10757092-10757111 None:intergenic 40.0%
AGAGGTTGAAGATGAAGTTG+TGG - chr5_1:10757119-10757138 None:intergenic 40.0%
! AATACCTTCTTCTAACGGGT+CGG + chr5_1:10757219-10757238 Msa0717130:CDS 40.0%
!! CAAAGTGTTTTTGCTCCAAG+GGG - chr5_1:10757331-10757350 None:intergenic 40.0%
!! GCAAAGTGTTTTTGCTCCAA+GGG - chr5_1:10757332-10757351 None:intergenic 40.0%
!! TGCAAAGTGTTTTTGCTCCA+AGG - chr5_1:10757333-10757352 None:intergenic 40.0%
AACACTTTGCAATGCATGTG+GGG + chr5_1:10757342-10757361 Msa0717130:CDS 40.0%
TGAAAATGTAGGGCTACAAG+CGG - chr5_1:10757407-10757426 None:intergenic 40.0%
! AGATTTTAGACCCGGTTCAA+TGG + chr5_1:10757630-10757649 Msa0717130:three_prime_UTR 40.0%
! GATTTTAGACCCGGTTCAAT+GGG + chr5_1:10757631-10757650 Msa0717130:three_prime_UTR 40.0%
TGCGGTAGGTTAGGTTAATT+AGG + chr5_1:10757695-10757714 Msa0717130:three_prime_UTR 40.0%
TATGGTTGAGAGAGGAATGG+TGG - chr5_1:10756222-10756241 None:intergenic 45.0%
AATACCTGTGAGTGAGGATG+AGG - chr5_1:10756284-10756303 None:intergenic 45.0%
CAACGTGAGAGAAGTCAAGA+AGG - chr5_1:10756543-10756562 None:intergenic 45.0%
! TGAGAGAGAGAGTGGTGTTA+GGG - chr5_1:10756639-10756658 None:intergenic 45.0%
TTGAGAGAGAGAGTGGTGTT+AGG - chr5_1:10756640-10756659 None:intergenic 45.0%
!! GAGTGATGATGTAGCGGATT+TGG + chr5_1:10756853-10756872 Msa0717130:intron 45.0%
!! GGGTTTTCTTGTTTCGGCTT+GGG - chr5_1:10756980-10756999 None:intergenic 45.0%
CAAGCCGAAACAAGAAAACC+CGG + chr5_1:10756979-10756998 Msa0717130:CDS 45.0%
!!! GGCTCTTTTGCTTCTAGCTT+TGG - chr5_1:10757035-10757054 None:intergenic 45.0%
AGAAGCAAAAGAGCCAGAAC+CGG + chr5_1:10757040-10757059 Msa0717130:CDS 45.0%
TGAAGATGAAGTTGTGGTGG+TGG - chr5_1:10757113-10757132 None:intergenic 45.0%
GGTTGAAGATGAAGTTGTGG+TGG - chr5_1:10757116-10757135 None:intergenic 45.0%
! ATACCTTCTTCTAACGGGTC+GGG + chr5_1:10757220-10757239 Msa0717130:CDS 45.0%
GTGTAACAAAGACTCCTCAG+TGG + chr5_1:10757296-10757315 Msa0717130:CDS 45.0%
ATGTGGGGTCCGTTTCAAAT+CGG + chr5_1:10757357-10757376 Msa0717130:CDS 45.0%
! ACAACCGACCCGATTTGAAA+CGG - chr5_1:10757369-10757388 None:intergenic 45.0%
GAAAATGTAGGGCTACAAGC+GGG - chr5_1:10757406-10757425 None:intergenic 45.0%
AATTGCACTCAAACCACCAC+CGG + chr5_1:10757431-10757450 Msa0717130:CDS 45.0%
!! ACCGGAAAGTGCTTGAAATG+CGG + chr5_1:10757449-10757468 Msa0717130:CDS 45.0%
AACTAGGAACAACCGGAGAA+CGG - chr5_1:10757528-10757547 None:intergenic 45.0%
! GGTAGTGCAGATTTTAGACC+CGG + chr5_1:10757622-10757641 Msa0717130:three_prime_UTR 45.0%
TTCCTTGTATTGAGTGCGGT+AGG + chr5_1:10757681-10757700 Msa0717130:three_prime_UTR 45.0%
AACCTACCGCACTCAATACA+AGG - chr5_1:10757686-10757705 None:intergenic 45.0%
TGTATTGAGTGCGGTAGGTT+AGG + chr5_1:10757686-10757705 Msa0717130:three_prime_UTR 45.0%
TATGGTTGAGAGAGGAATGG+TGG - chr5_1:10756222-10756241 None:intergenic 45.0%
AATACCTGTGAGTGAGGATG+AGG - chr5_1:10756284-10756303 None:intergenic 45.0%
CAACGTGAGAGAAGTCAAGA+AGG - chr5_1:10756543-10756562 None:intergenic 45.0%
! TGAGAGAGAGAGTGGTGTTA+GGG - chr5_1:10756639-10756658 None:intergenic 45.0%
TTGAGAGAGAGAGTGGTGTT+AGG - chr5_1:10756640-10756659 None:intergenic 45.0%
!! GAGTGATGATGTAGCGGATT+TGG + chr5_1:10756853-10756872 Msa0717130:intron 45.0%
!! GGGTTTTCTTGTTTCGGCTT+GGG - chr5_1:10756980-10756999 None:intergenic 45.0%
CAAGCCGAAACAAGAAAACC+CGG + chr5_1:10756979-10756998 Msa0717130:CDS 45.0%
!!! GGCTCTTTTGCTTCTAGCTT+TGG - chr5_1:10757035-10757054 None:intergenic 45.0%
AGAAGCAAAAGAGCCAGAAC+CGG + chr5_1:10757040-10757059 Msa0717130:CDS 45.0%
TGAAGATGAAGTTGTGGTGG+TGG - chr5_1:10757113-10757132 None:intergenic 45.0%
GGTTGAAGATGAAGTTGTGG+TGG - chr5_1:10757116-10757135 None:intergenic 45.0%
! ATACCTTCTTCTAACGGGTC+GGG + chr5_1:10757220-10757239 Msa0717130:CDS 45.0%
GTGTAACAAAGACTCCTCAG+TGG + chr5_1:10757296-10757315 Msa0717130:CDS 45.0%
ATGTGGGGTCCGTTTCAAAT+CGG + chr5_1:10757357-10757376 Msa0717130:CDS 45.0%
! ACAACCGACCCGATTTGAAA+CGG - chr5_1:10757369-10757388 None:intergenic 45.0%
GAAAATGTAGGGCTACAAGC+GGG - chr5_1:10757406-10757425 None:intergenic 45.0%
AATTGCACTCAAACCACCAC+CGG + chr5_1:10757431-10757450 Msa0717130:CDS 45.0%
!! ACCGGAAAGTGCTTGAAATG+CGG + chr5_1:10757449-10757468 Msa0717130:CDS 45.0%
AACTAGGAACAACCGGAGAA+CGG - chr5_1:10757528-10757547 None:intergenic 45.0%
! GGTAGTGCAGATTTTAGACC+CGG + chr5_1:10757622-10757641 Msa0717130:three_prime_UTR 45.0%
TTCCTTGTATTGAGTGCGGT+AGG + chr5_1:10757681-10757700 Msa0717130:three_prime_UTR 45.0%
AACCTACCGCACTCAATACA+AGG - chr5_1:10757686-10757705 None:intergenic 45.0%
TGTATTGAGTGCGGTAGGTT+AGG + chr5_1:10757686-10757705 Msa0717130:three_prime_UTR 45.0%
!! ATGAAGGGTGAAAGCGTCCA+AGG - chr5_1:10756138-10756157 None:intergenic 50.0%
TCTTCCTCATCCTCACTCAC+AGG + chr5_1:10756277-10756296 Msa0717130:CDS 50.0%
GGAACGTTGAGTTCGTTGGT+GGG - chr5_1:10756682-10756701 None:intergenic 50.0%
CACCAACGAACTCAACGTTC+CGG + chr5_1:10756681-10756700 Msa0717130:CDS 50.0%
TACCGGAACGTTGAGTTCGT+TGG - chr5_1:10756686-10756705 None:intergenic 50.0%
!! CGGGTTTTCTTGTTTCGGCT+TGG - chr5_1:10756981-10757000 None:intergenic 50.0%
AAAGAGCCAGAACCGGAGTT+AGG + chr5_1:10757047-10757066 Msa0717130:CDS 50.0%
AAGAGCCAGAACCGGAGTTA+GGG + chr5_1:10757048-10757067 Msa0717130:CDS 50.0%
GAATGGCCAAACCCTAACTC+CGG - chr5_1:10757062-10757081 None:intergenic 50.0%
GGAGTTAGGGTTTGGCCATT+CGG + chr5_1:10757061-10757080 Msa0717130:CDS 50.0%
GAGTTAGGGTTTGGCCATTC+GGG + chr5_1:10757062-10757081 Msa0717130:CDS 50.0%
GAAGAATCGGTTGACCCGAA+TGG - chr5_1:10757079-10757098 None:intergenic 50.0%
!! GGGACTAGTTGGAGATGAAG+AGG - chr5_1:10757137-10757156 None:intergenic 50.0%
AAGACTCCTCAGTGGAGAAG+TGG + chr5_1:10757304-10757323 Msa0717130:CDS 50.0%
TGTGGGGTCCGTTTCAAATC+GGG + chr5_1:10757358-10757377 Msa0717130:CDS 50.0%
TTTCAAGCACTTTCCGGTGG+TGG - chr5_1:10757447-10757466 None:intergenic 50.0%
GCATTTCAAGCACTTTCCGG+TGG - chr5_1:10757450-10757469 None:intergenic 50.0%
GCCGCATTTCAAGCACTTTC+CGG - chr5_1:10757453-10757472 None:intergenic 50.0%
!! GGAAAGTGCTTGAAATGCGG+CGG + chr5_1:10757452-10757471 Msa0717130:CDS 50.0%
AACTGGTATGTCCCGTTCTC+CGG + chr5_1:10757513-10757532 Msa0717130:CDS 50.0%
ACTAGGAACAACCGGAGAAC+GGG - chr5_1:10757527-10757546 None:intergenic 50.0%
TAACTCGGGTCCCATTGAAC+CGG - chr5_1:10757644-10757663 None:intergenic 50.0%
!! ATGAAGGGTGAAAGCGTCCA+AGG - chr5_1:10756138-10756157 None:intergenic 50.0%
TCTTCCTCATCCTCACTCAC+AGG + chr5_1:10756277-10756296 Msa0717130:CDS 50.0%
GGAACGTTGAGTTCGTTGGT+GGG - chr5_1:10756682-10756701 None:intergenic 50.0%
CACCAACGAACTCAACGTTC+CGG + chr5_1:10756681-10756700 Msa0717130:CDS 50.0%
TACCGGAACGTTGAGTTCGT+TGG - chr5_1:10756686-10756705 None:intergenic 50.0%
!! CGGGTTTTCTTGTTTCGGCT+TGG - chr5_1:10756981-10757000 None:intergenic 50.0%
AAAGAGCCAGAACCGGAGTT+AGG + chr5_1:10757047-10757066 Msa0717130:CDS 50.0%
AAGAGCCAGAACCGGAGTTA+GGG + chr5_1:10757048-10757067 Msa0717130:CDS 50.0%
GAATGGCCAAACCCTAACTC+CGG - chr5_1:10757062-10757081 None:intergenic 50.0%
GGAGTTAGGGTTTGGCCATT+CGG + chr5_1:10757061-10757080 Msa0717130:CDS 50.0%
GAGTTAGGGTTTGGCCATTC+GGG + chr5_1:10757062-10757081 Msa0717130:CDS 50.0%
GAAGAATCGGTTGACCCGAA+TGG - chr5_1:10757079-10757098 None:intergenic 50.0%
!! GGGACTAGTTGGAGATGAAG+AGG - chr5_1:10757137-10757156 None:intergenic 50.0%
AAGACTCCTCAGTGGAGAAG+TGG + chr5_1:10757304-10757323 Msa0717130:CDS 50.0%
TGTGGGGTCCGTTTCAAATC+GGG + chr5_1:10757358-10757377 Msa0717130:CDS 50.0%
TTTCAAGCACTTTCCGGTGG+TGG - chr5_1:10757447-10757466 None:intergenic 50.0%
GCATTTCAAGCACTTTCCGG+TGG - chr5_1:10757450-10757469 None:intergenic 50.0%
GCCGCATTTCAAGCACTTTC+CGG - chr5_1:10757453-10757472 None:intergenic 50.0%
!! GGAAAGTGCTTGAAATGCGG+CGG + chr5_1:10757452-10757471 Msa0717130:CDS 50.0%
AACTGGTATGTCCCGTTCTC+CGG + chr5_1:10757513-10757532 Msa0717130:CDS 50.0%
ACTAGGAACAACCGGAGAAC+GGG - chr5_1:10757527-10757546 None:intergenic 50.0%
TAACTCGGGTCCCATTGAAC+CGG - chr5_1:10757644-10757663 None:intergenic 50.0%
CGGAACGTTGAGTTCGTTGG+TGG - chr5_1:10756683-10756702 None:intergenic 55.0%
CCAAACCCTAACTCCGGTTC+TGG - chr5_1:10757056-10757075 None:intergenic 55.0%
CCAGAACCGGAGTTAGGGTT+TGG + chr5_1:10757053-10757072 Msa0717130:CDS 55.0%
TGACCCGACCCGTTAGAAGA+AGG - chr5_1:10757226-10757245 None:intergenic 55.0%
! TCTTCTAACGGGTCGGGTCA+AGG + chr5_1:10757226-10757245 Msa0717130:CDS 55.0%
!! TCAAGGTGGTGCGCTGGTTA+TGG + chr5_1:10757243-10757262 Msa0717130:CDS 55.0%
GGGTCCGTTTCAAATCGGGT+CGG + chr5_1:10757362-10757381 Msa0717130:CDS 55.0%
CTACAAGCGGGTCGATACTC+GGG - chr5_1:10757394-10757413 None:intergenic 55.0%
GCTACAAGCGGGTCGATACT+CGG - chr5_1:10757395-10757414 None:intergenic 55.0%
GCTTGAAATGCGGCGGAAGA+AGG + chr5_1:10757459-10757478 Msa0717130:CDS 55.0%
TGAAATGCGGCGGAAGAAGG+AGG + chr5_1:10757462-10757481 Msa0717130:CDS 55.0%
CGGAAGAAGGAGGTTGTTGG+TGG + chr5_1:10757472-10757491 Msa0717130:CDS 55.0%
AACTCGGGTCCCATTGAACC+GGG - chr5_1:10757643-10757662 None:intergenic 55.0%
CGGAACGTTGAGTTCGTTGG+TGG - chr5_1:10756683-10756702 None:intergenic 55.0%
CCAAACCCTAACTCCGGTTC+TGG - chr5_1:10757056-10757075 None:intergenic 55.0%
CCAGAACCGGAGTTAGGGTT+TGG + chr5_1:10757053-10757072 Msa0717130:CDS 55.0%
TGACCCGACCCGTTAGAAGA+AGG - chr5_1:10757226-10757245 None:intergenic 55.0%
! TCTTCTAACGGGTCGGGTCA+AGG + chr5_1:10757226-10757245 Msa0717130:CDS 55.0%
!! TCAAGGTGGTGCGCTGGTTA+TGG + chr5_1:10757243-10757262 Msa0717130:CDS 55.0%
GGGTCCGTTTCAAATCGGGT+CGG + chr5_1:10757362-10757381 Msa0717130:CDS 55.0%
CTACAAGCGGGTCGATACTC+GGG - chr5_1:10757394-10757413 None:intergenic 55.0%
GCTACAAGCGGGTCGATACT+CGG - chr5_1:10757395-10757414 None:intergenic 55.0%
GCTTGAAATGCGGCGGAAGA+AGG + chr5_1:10757459-10757478 Msa0717130:CDS 55.0%
TGAAATGCGGCGGAAGAAGG+AGG + chr5_1:10757462-10757481 Msa0717130:CDS 55.0%
CGGAAGAAGGAGGTTGTTGG+TGG + chr5_1:10757472-10757491 Msa0717130:CDS 55.0%
AACTCGGGTCCCATTGAACC+GGG - chr5_1:10757643-10757662 None:intergenic 55.0%
! TCTAACGGGTCGGGTCAAGG+TGG + chr5_1:10757229-10757248 Msa0717130:CDS 60.0%
!! AGGTGGTGCGCTGGTTATGG+CGG + chr5_1:10757246-10757265 Msa0717130:CDS 60.0%
CCACAATGACTGCACCGTCG+CGG - chr5_1:10757277-10757296 None:intergenic 60.0%
AGGGGTCCACTTCTCCACTG+AGG - chr5_1:10757313-10757332 None:intergenic 60.0%
CAGTGGAGAAGTGGACCCCT+TGG + chr5_1:10757313-10757332 Msa0717130:CDS 60.0%
CGGCGGAAGAAGGAGGTTGT+TGG + chr5_1:10757469-10757488 Msa0717130:CDS 60.0%
! TCTAACGGGTCGGGTCAAGG+TGG + chr5_1:10757229-10757248 Msa0717130:CDS 60.0%
!! AGGTGGTGCGCTGGTTATGG+CGG + chr5_1:10757246-10757265 Msa0717130:CDS 60.0%
CCACAATGACTGCACCGTCG+CGG - chr5_1:10757277-10757296 None:intergenic 60.0%
AGGGGTCCACTTCTCCACTG+AGG - chr5_1:10757313-10757332 None:intergenic 60.0%
CAGTGGAGAAGTGGACCCCT+TGG + chr5_1:10757313-10757332 Msa0717130:CDS 60.0%
CGGCGGAAGAAGGAGGTTGT+TGG + chr5_1:10757469-10757488 Msa0717130:CDS 60.0%
CAATGACTGCACCGTCGCGG+TGG - chr5_1:10757274-10757293 None:intergenic 65.0%
CCGCGACGGTGCAGTCATTG+TGG + chr5_1:10757274-10757293 Msa0717130:CDS 65.0%
CAATGACTGCACCGTCGCGG+TGG - chr5_1:10757274-10757293 None:intergenic 65.0%
CCGCGACGGTGCAGTCATTG+TGG + chr5_1:10757274-10757293 Msa0717130:CDS 65.0%
GTCGGGTCAAGGTGGTGCGC+TGG + chr5_1:10757237-10757256 Msa0717130:CDS 70.0%
TTATGGCGGCGCCACCGCGA+CGG + chr5_1:10757260-10757279 Msa0717130:CDS 70.0%
GTCGGGTCAAGGTGGTGCGC+TGG + chr5_1:10757237-10757256 Msa0717130:CDS 70.0%
TTATGGCGGCGCCACCGCGA+CGG + chr5_1:10757260-10757279 Msa0717130:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 10756106 10757753 10756106 ID=Msa0717130;Name=Msa0717130
chr5_1 mRNA 10756106 10757753 10756106 ID=Msa0717130-mRNA-1;Parent=Msa0717130;Name=Msa0717130-mRNA-1;_AED=0.01;_eAED=0.01;_QI=55|1|1|1|1|1|3|201|380
chr5_1 exon 10756106 10756298 10756106 ID=Msa0717130-mRNA-1:exon:4389;Parent=Msa0717130-mRNA-1
chr5_1 exon 10756397 10756702 10756397 ID=Msa0717130-mRNA-1:exon:4390;Parent=Msa0717130-mRNA-1
chr5_1 exon 10756854 10757753 10756854 ID=Msa0717130-mRNA-1:exon:4391;Parent=Msa0717130-mRNA-1
chr5_1 five_prime_UTR 10756106 10756160 10756106 ID=Msa0717130-mRNA-1:five_prime_utr;Parent=Msa0717130-mRNA-1
chr5_1 CDS 10756161 10756298 10756161 ID=Msa0717130-mRNA-1:cds;Parent=Msa0717130-mRNA-1
chr5_1 CDS 10756397 10756702 10756397 ID=Msa0717130-mRNA-1:cds;Parent=Msa0717130-mRNA-1
chr5_1 CDS 10756854 10757552 10756854 ID=Msa0717130-mRNA-1:cds;Parent=Msa0717130-mRNA-1
chr5_1 three_prime_UTR 10757553 10757753 10757553 ID=Msa0717130-mRNA-1:three_prime_utr;Parent=Msa0717130-mRNA-1
Gene Sequence

>Msa0717130

ATGCTTTACCAAACTTCCTATCCTCTTCTCTTTCAATTTCATCCTTTGCATTCTTCTTCCACCATTCCTCTCTCAACCATATCAGTTTCACCACAAAAACTTTCTCTCTTTTCTCATCTTCCTCATCCTCACTCACAGGCTTCAAAAACGGAAATGGAGTGCGTTGAAACAGCGTTGAAAACCAGTTTAAGGAAAGACATAACTCCTCAAACATTTGTTGATGAAATTTCAGTCCTCAATGCACAAAATGGAACAACTTCTGATGATTTTTTCGTTGACGACCTTCTTGACTTCTCTCACGTTGAAGAACAACACCAAGAAGAAGAACAAGAACACTCTCCTTGTCTCTCCCTCAAAGAAAACCATGAAACTTCAAACCCTAACACCACTCTCTCTCTCAAAGAAGATTATTCTTCTCTACCCACCAACGAACTCAACGTTCCGAGTGATGATGTAGCGGATTTGGAATGGCTTTCACATTTCGTTGAAGATACTGATTCCTTCTCTGGAATGGCTTTAACAACAACAACGGAGAAAAACCCTAAAAGCCTTGTTGTGTTTGAAGAACCCAAGCCGAAACAAGAAAACCCGGTTTTTACTACTTTCAAAACACCGGTTCAAACCAAAGCTAGAAGCAAAAGAGCCAGAACCGGAGTTAGGGTTTGGCCATTCGGGTCAACCGATTCTTCTTCAAGCTCAACCACCACCACAACTTCATCTTCAACCTCTTCATCTCCAACTAGTCCCTTACTGATTTACACCAACATGCTTCAAAGTTTTGACTCGGTTAAGGTAAAGAAACCGAAGAAAATACCTTCTTCTAACGGGTCGGGTCAAGGTGGTGCGCTGGTTATGGCGGCGCCACCGCGACGGTGCAGTCATTGTGGTGTAACAAAGACTCCTCAGTGGAGAAGTGGACCCCTTGGAGCAAAAACACTTTGCAATGCATGTGGGGTCCGTTTCAAATCGGGTCGGTTGTTACCCGAGTATCGACCCGCTTGTAGCCCTACATTTTCAAGTGAATTGCACTCAAACCACCACCGGAAAGTGCTTGAAATGCGGCGGAAGAAGGAGGTTGTTGGTGGTGTTGAAATTGAAGTTGAAACTGGTATGTCCCGTTCTCCGGTTGTTCCTAGTTTTTGA
Protein sequence

>Msa0717130

MLYQTSYPLLFQFHPLHSSSTIPLSTISVSPQKLSLFSHLPHPHSQASKTEMECVETALKTSLRKDITPQTFVDEISVLNAQNGTTSDDFFVDDLLDFSHVEEQHQEEEQEHSPCLSLKENHETSNPNTTLSLKEDYSSLPTNELNVPSDDVADLEWLSHFVEDTDSFSGMALTTTTEKNPKSLVVFEEPKPKQENPVFTTFKTPVQTKARSKRARTGVRVWPFGSTDSSSSSTTTTTSSSTSSSPTSPLLIYTNMLQSFDSVKVKKPKKIPSSNGSGQGGALVMAAPPRRCSHCGVTKTPQWRSGPLGAKTLCNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKEVVGGVEIEVETGMSRSPVVPSF*