Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717170 | XP_003612112.2 | 91.904 | 667 | 6 | 2 | 2 | 620 | 6 | 672 | 0.0 | 1226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717170 | sp|Q20035|TMCO4_CAEEL | 35.835 | 413 | 231 | 9 | 202 | 602 | 157 | 547 | 1.08e-62 | 221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717170 | G7KGC8 | 91.904 | 667 | 6 | 2 | 2 | 620 | 6 | 672 | 0.0 | 1226 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0717170 | Msa0758240 | 0.978928 | 7.305873e-147 | -8.615850e-47 |
| Msa0717170 | Msa0799590 | 0.844149 | 9.042617e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717170 | MtrunA17_Chr5g0405021 | 91.904 | 667 | 6 | 2 | 2 | 620 | 6 | 672 | 0.0 | 1226 |
| Msa0717170 | MtrunA17_Chr8g0372231 | 69.072 | 679 | 147 | 7 | 1 | 616 | 1 | 679 | 0.0 | 830 |
| Msa0717170 | MtrunA17_Chr3g0142241 | 56.515 | 660 | 220 | 10 | 8 | 614 | 4 | 649 | 0.0 | 646 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717170 | AT4G36210.3 | 62.985 | 670 | 183 | 6 | 10 | 617 | 6 | 672 | 0.0 | 758 |
| Msa0717170 | AT2G18100.1 | 61.246 | 658 | 198 | 6 | 10 | 617 | 6 | 656 | 0.0 | 726 |
| Msa0717170 | AT4G36210.1 | 68.354 | 553 | 159 | 4 | 78 | 617 | 1 | 550 | 0.0 | 696 |
| Msa0717170 | AT2G18100.4 | 67.647 | 544 | 165 | 5 | 78 | 617 | 1 | 537 | 0.0 | 676 |
| Msa0717170 | AT2G18100.2 | 60.033 | 603 | 184 | 6 | 10 | 562 | 6 | 601 | 0.0 | 637 |
| Msa0717170 | AT4G36210.2 | 61.844 | 553 | 161 | 7 | 78 | 617 | 1 | 516 | 0.0 | 596 |
| Msa0717170 | AT2G18100.3 | 57.030 | 505 | 160 | 6 | 10 | 464 | 6 | 503 | 3.65e-166 | 484 |
Find 184 sgRNAs with CRISPR-Local
Find 507 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAACTCTTCTAGCCATTT+TGG | 0.167539 | 5_1:+10845739 | None:intergenic |
| TTTCTTCTTGTTTGAATATA+AGG | 0.204854 | 5_1:-10842086 | Msa0717170:three_prime_UTR |
| ATGTCTACCTTCTCAGAATT+TGG | 0.225485 | 5_1:+10847616 | None:intergenic |
| GTAGAAAGAGTTGTCCTTCT+TGG | 0.231742 | 5_1:-10843142 | Msa0717170:CDS |
| TGCTGTTAGCACTGCAATTC+AGG | 0.234360 | 5_1:-10844500 | Msa0717170:CDS |
| ATTGGTGCTGCAGCGTTAAC+TGG | 0.234571 | 5_1:-10846860 | Msa0717170:CDS |
| GCTAACAGCAATTAGATTCT+TGG | 0.236840 | 5_1:+10844513 | None:intergenic |
| GCTGCTTGCTGAAGTGTTAT+TGG | 0.241912 | 5_1:-10843577 | Msa0717170:CDS |
| TTGGAAGTGGTTTACTCTTT+AGG | 0.258343 | 5_1:+10842115 | None:intergenic |
| ATGAAAGCGGCTGGGCTAAA+TGG | 0.260246 | 5_1:-10846898 | Msa0717170:CDS |
| GGAGCTTTGATGGCTATTAC+TGG | 0.270982 | 5_1:-10846836 | Msa0717170:CDS |
| TTCAGGCCTGTGACACTTAT+AGG | 0.271286 | 5_1:-10843456 | Msa0717170:intron |
| GGTACTTTGATCCCTGTTAT+TGG | 0.273900 | 5_1:-10846660 | Msa0717170:CDS |
| GGTGCTTTGGCTCCAACTTT+AGG | 0.280082 | 5_1:-10846681 | Msa0717170:CDS |
| TGGAAGCGGGGTGGTATTAT+TGG | 0.283623 | 5_1:-10846878 | Msa0717170:CDS |
| GTTGCTGTTGCTGCCTCATT+TGG | 0.285743 | 5_1:-10846585 | Msa0717170:CDS |
| GCGGTTGAGATATTGGTTTC+CGG | 0.288673 | 5_1:-10845477 | Msa0717170:CDS |
| GCTGCTGGAGCAGGGCTTAC+TGG | 0.292566 | 5_1:-10845764 | Msa0717170:CDS |
| TGGGAGGATTGCAGGGAAAT+AGG | 0.293851 | 5_1:-10843557 | Msa0717170:intron |
| GAGATTGGCGGTTGAGATAT+TGG | 0.296030 | 5_1:-10845484 | Msa0717170:CDS |
| CCAGCAATTGCTGCAGGACT+TGG | 0.300014 | 5_1:-10846702 | Msa0717170:CDS |
| GCTGCTTGTTTGTCGGATAT+TGG | 0.303036 | 5_1:-10847436 | Msa0717170:CDS |
| TGCTGCAGGACTTGGTGCTT+TGG | 0.304867 | 5_1:-10846694 | Msa0717170:CDS |
| CCAAGTCCTGCAGCAATTGC+TGG | 0.316918 | 5_1:+10846702 | None:intergenic |
| AATCCACCTGCTCCAATAAC+AGG | 0.326832 | 5_1:+10846648 | None:intergenic |
| TTTCAAGTGTCTAGAGTGTT+TGG | 0.336058 | 5_1:-10843409 | Msa0717170:CDS |
| TTCCGAAGATCCTGACCTTT+GGG | 0.339715 | 5_1:-10848985 | Msa0717170:CDS |
| GTGTAGAGCAAGGCCGAATA+AGG | 0.353145 | 5_1:+10849094 | None:intergenic |
| GTTCAACCAGCTGCTGGAGC+AGG | 0.355459 | 5_1:-10845773 | Msa0717170:intron |
| AGGGGCACTCTTCATATTTG+TGG | 0.356835 | 5_1:-10842204 | Msa0717170:CDS |
| TTTCCGAAGATCCTGACCTT+TGG | 0.358293 | 5_1:-10848986 | Msa0717170:CDS |
| AAATGCTTACGCCTTGGTTA+TGG | 0.359624 | 5_1:+10845678 | None:intergenic |
| AGGAAGAATGCTGTTATAAA+CGG | 0.362048 | 5_1:+10842135 | None:intergenic |
| GGAAGGACAGAATGACAATT+TGG | 0.368053 | 5_1:-10845418 | Msa0717170:CDS |
| CTGCTTGCTGAAGTGTTATT+GGG | 0.370710 | 5_1:-10843576 | Msa0717170:CDS |
| GTCGGAAGCAGTTGATGCTT+TGG | 0.382178 | 5_1:-10847743 | Msa0717170:CDS |
| TACGCCGCCGGAGCCTTATT+CGG | 0.383035 | 5_1:-10849107 | Msa0717170:CDS |
| TGGAGCACCCATTGCAATCA+AGG | 0.383681 | 5_1:-10843122 | Msa0717170:CDS |
| TTGCAATCAAGGATGTGAAT+TGG | 0.393972 | 5_1:-10843111 | Msa0717170:CDS |
| AGTGTTATTGGGAGGATTGC+AGG | 0.394836 | 5_1:-10843565 | Msa0717170:CDS |
| AACCCAAAGGTCAGGATCTT+CGG | 0.395361 | 5_1:+10848983 | None:intergenic |
| GAATTTGAATTCAGAGCTAT+AGG | 0.402036 | 5_1:-10845707 | Msa0717170:CDS |
| GGGGCACTCTTCATATTTGT+GGG | 0.405661 | 5_1:-10842203 | Msa0717170:CDS |
| TTGATCCCTGTTATTGGAGC+AGG | 0.410189 | 5_1:-10846654 | Msa0717170:CDS |
| ACTTCTCGCTGCTTGTTTGT+CGG | 0.412094 | 5_1:-10847443 | Msa0717170:CDS |
| GTATCACTGTCAAGAGGATC+TGG | 0.414890 | 5_1:-10842049 | Msa0717170:three_prime_UTR |
| TGAGAAGGTAGACATGCATT+TGG | 0.418213 | 5_1:-10847608 | Msa0717170:CDS |
| AGGGCTTACTGGAACCAAAA+TGG | 0.418715 | 5_1:-10845753 | Msa0717170:CDS |
| CTCAATCAAATGAAAGCGGC+TGG | 0.419874 | 5_1:-10846907 | Msa0717170:CDS |
| ATCCAGCCAATCGATATTCC+TGG | 0.430455 | 5_1:-10842442 | Msa0717170:CDS |
| TGCAATCAAGGATGTGAATT+GGG | 0.430976 | 5_1:-10843110 | Msa0717170:CDS |
| TTGGAGTTGCTTTCCGTGCC+AGG | 0.433689 | 5_1:-10842916 | Msa0717170:intron |
| AGCATCATTAACTCTTCAAC+TGG | 0.436371 | 5_1:+10847499 | None:intergenic |
| GGAAGAATGCTGTTATAAAC+GGG | 0.436745 | 5_1:+10842136 | None:intergenic |
| TTCACATCCTTGATTGCAAT+GGG | 0.439203 | 5_1:+10843115 | None:intergenic |
| AGTGCAGCAGGAACTGTTGC+TGG | 0.439323 | 5_1:-10846612 | Msa0717170:CDS |
| CAAGTCCTGCAGCAATTGCT+GGG | 0.440501 | 5_1:+10846703 | None:intergenic |
| GTGGGCTACACAACAGATCT+TGG | 0.444379 | 5_1:-10842185 | Msa0717170:CDS |
| GATCTTGGATGAGCTTGAAC+TGG | 0.448026 | 5_1:-10842170 | Msa0717170:CDS |
| ACCAAAATGGCTAGAAGAGT+TGG | 0.449353 | 5_1:-10845740 | Msa0717170:CDS |
| TTACTTTCTCAAGGTTTAGC+TGG | 0.449702 | 5_1:-10842466 | Msa0717170:CDS |
| AGATCAAGAGCTTGCTTTGT+CGG | 0.453941 | 5_1:-10847761 | Msa0717170:CDS |
| CGTGGTCAATTGCTATTGAC+AGG | 0.454328 | 5_1:-10844260 | Msa0717170:intron |
| CTCTACGGCTGCTTGCAACT+TGG | 0.457134 | 5_1:-10847354 | Msa0717170:CDS |
| TTCCAGGAATATCGATTGGC+TGG | 0.457728 | 5_1:+10842440 | None:intergenic |
| ATCCCTGTTATTGGAGCAGG+TGG | 0.457983 | 5_1:-10846651 | Msa0717170:CDS |
| GCTGTTGCTGCCTCATTTGG+AGG | 0.458581 | 5_1:-10846582 | Msa0717170:intron |
| TTCGGAAACCGCACGGGTGG+AGG | 0.464430 | 5_1:+10849001 | None:intergenic |
| AAAATATACTCGGAGAAGAA+AGG | 0.464904 | 5_1:-10847401 | Msa0717170:CDS |
| CTTTGGGTTCACCACACCTC+CGG | 0.465949 | 5_1:-10848969 | Msa0717170:CDS |
| AAACAAGAAGAAAGTGGGAT+TGG | 0.466158 | 5_1:+10842096 | None:intergenic |
| TCAAGGACCGACTGGATGCT+TGG | 0.466749 | 5_1:-10842935 | Msa0717170:CDS |
| TTCAACCAGCTGCTGGAGCA+GGG | 0.470259 | 5_1:-10845772 | Msa0717170:intron |
| CGGTTGAAAGGCCTAGTGGA+TGG | 0.475310 | 5_1:+10849051 | None:intergenic |
| TTGGTGCTGCAGCGTTAACT+GGG | 0.480718 | 5_1:-10846859 | Msa0717170:CDS |
| TGTATTCTGTAGATGGTAGC+TGG | 0.481297 | 5_1:-10842977 | Msa0717170:intron |
| TCTAGAGTGTTTGGCTGAAA+CGG | 0.481964 | 5_1:-10843400 | Msa0717170:CDS |
| CTCGACATCGCGTGGCTCTA+CGG | 0.482194 | 5_1:-10847369 | Msa0717170:CDS |
| GATTTATAAATGCTTATTCA+AGG | 0.483497 | 5_1:-10842952 | Msa0717170:CDS |
| GCAGCAGCTGCTAGTGCAGC+AGG | 0.484812 | 5_1:-10846624 | Msa0717170:CDS |
| GTGTTATTGGGAGGATTGCA+GGG | 0.490048 | 5_1:-10843564 | Msa0717170:CDS |
| CTTCTGCTTGCAGAGATTGG+CGG | 0.490062 | 5_1:-10845496 | Msa0717170:intron |
| GGAAACCGCACGGGTGGAGG+TGG | 0.497130 | 5_1:+10849004 | None:intergenic |
| ATCCTCTTGACAGTGATACT+AGG | 0.499651 | 5_1:+10842053 | None:intergenic |
| GAAGAAAGTGGGATTGGAAG+TGG | 0.505061 | 5_1:+10842102 | None:intergenic |
| AAATATACTCGGAGAAGAAA+GGG | 0.505514 | 5_1:-10847400 | Msa0717170:CDS |
| GCTGCCCCAGCAATTGCTGC+AGG | 0.505868 | 5_1:-10846708 | Msa0717170:CDS |
| ATCTTCCTCAAAGACAAATC+CGG | 0.507049 | 5_1:+10845458 | None:intergenic |
| CGGCTGGGCTAAATGGAAGC+GGG | 0.507116 | 5_1:-10846891 | Msa0717170:CDS |
| GGGTTTGATGAAGTTGTGCT+TGG | 0.508794 | 5_1:+10849072 | None:intergenic |
| GTGTGGTGAACCCAAAGGTC+AGG | 0.509293 | 5_1:+10848975 | None:intergenic |
| TTGTCATTCTGTCCTTCCCA+TGG | 0.510320 | 5_1:+10845423 | None:intergenic |
| TGGATTCCAGGAATATCGAT+TGG | 0.510632 | 5_1:+10842436 | None:intergenic |
| GGTTTCCGGATTTGTCTTTG+AGG | 0.512449 | 5_1:-10845463 | Msa0717170:CDS |
| ACAAACAAGCAGCGAGAAGT+TGG | 0.514127 | 5_1:+10847446 | None:intergenic |
| ATTCACATCCTTGATTGCAA+TGG | 0.515597 | 5_1:+10843114 | None:intergenic |
| CACGCCTCAGCCCTCATGCA+TGG | 0.516826 | 5_1:+10842022 | None:intergenic |
| CGTCAAAGTTTGTATAAAAG+CGG | 0.517072 | 5_1:+10849250 | None:intergenic |
| GGTTGAAAGGCCTAGTGGAT+GGG | 0.518842 | 5_1:+10849052 | None:intergenic |
| GGGATCAAAGTACCTAAAGT+TGG | 0.520544 | 5_1:+10846669 | None:intergenic |
| TTGTGCAGCTTACTTTCTCA+AGG | 0.525281 | 5_1:-10842475 | Msa0717170:intron |
| AAGGAAAATCGTCGGTTGAA+AGG | 0.533123 | 5_1:+10849039 | None:intergenic |
| CCAAAATGGCTAGAAGAGTT+GGG | 0.533798 | 5_1:-10845739 | Msa0717170:CDS |
| ATTCCCATGCATGAGGGCTG+AGG | 0.534301 | 5_1:-10842026 | Msa0717170:three_prime_UTR |
| GTAGCGGCAAGCAATGCAGC+TGG | 0.535934 | 5_1:+10844300 | None:intergenic |
| GAATTGGGAAGCTGCTAGAA+AGG | 0.536710 | 5_1:-10843095 | Msa0717170:intron |
| ATGCTTATTCAAGGACCGAC+TGG | 0.538674 | 5_1:-10842943 | Msa0717170:CDS |
| GCGATGGAGCTGATGAAGCA+AGG | 0.546216 | 5_1:-10844369 | Msa0717170:CDS |
| GAGGTGGAACTGCTCGGAGA+AGG | 0.546454 | 5_1:+10849020 | None:intergenic |
| TGTTTGTTACATACTCCCTC+CGG | 0.547632 | 5_1:-10841888 | Msa0717170:three_prime_UTR |
| AGCAAGGCCGAATAAGGCTC+CGG | 0.549379 | 5_1:+10849100 | None:intergenic |
| TTAGCACTGCAATTCAGGAC+TGG | 0.550601 | 5_1:-10844495 | Msa0717170:CDS |
| CATATATATACCTCCAAATG+AGG | 0.555950 | 5_1:+10846572 | None:intergenic |
| ACACTTATAGGTTACTCACT+TGG | 0.556518 | 5_1:-10843444 | Msa0717170:CDS |
| GAGTAACCTATAAGTGTCAC+AGG | 0.557832 | 5_1:+10843450 | None:intergenic |
| GATAGTTTCTAGTTCTGCAA+TGG | 0.559035 | 5_1:-10846963 | Msa0717170:CDS |
| ACTTTGCTTATAATAGTGAC+CGG | 0.559334 | 5_1:+10841869 | None:intergenic |
| CGATGGAGCTGATGAAGCAA+GGG | 0.561275 | 5_1:-10844368 | Msa0717170:CDS |
| ATCTTCGGAAACCGCACGGG+TGG | 0.562733 | 5_1:+10848998 | None:intergenic |
| CCGGCGGCGTATCTTTGCGT+CGG | 0.563162 | 5_1:+10849119 | None:intergenic |
| GACGTGACAGATCACATTGA+GGG | 0.564107 | 5_1:-10842223 | Msa0717170:CDS |
| CTCAGAATTTGGTTGAACAT+CGG | 0.566336 | 5_1:+10847627 | None:intergenic |
| ACGCCTCAGCCCTCATGCAT+GGG | 0.566595 | 5_1:+10842023 | None:intergenic |
| TATTCAAACAAGAAGAAAGT+GGG | 0.566950 | 5_1:+10842091 | None:intergenic |
| CTTTACGCGTGCAGAGTGAT+CGG | 0.569485 | 5_1:+10849186 | None:intergenic |
| CTTGCTGAAGTGTTATTGGG+AGG | 0.576868 | 5_1:-10843573 | Msa0717170:CDS |
| GCGGCTGGGCTAAATGGAAG+CGG | 0.579262 | 5_1:-10846892 | Msa0717170:CDS |
| TTGCAATGGGTGCTCCAAGA+AGG | 0.580918 | 5_1:+10843128 | None:intergenic |
| CTGTTAGAAGATCCCTCATG+TGG | 0.581332 | 5_1:+10847538 | None:intergenic |
| GGCGAAGCAAACCGGAGGTG+TGG | 0.586839 | 5_1:+10848958 | None:intergenic |
| ATATTCAAACAAGAAGAAAG+TGG | 0.590551 | 5_1:+10842090 | None:intergenic |
| CTTCATCAAACCCATCCACT+AGG | 0.593594 | 5_1:-10849062 | Msa0717170:CDS |
| AGTTAGGTATGCACTGCAGT+GGG | 0.595357 | 5_1:-10844539 | Msa0717170:intron |
| TGCTTATAATAGTGACCGGA+GGG | 0.596213 | 5_1:+10841873 | None:intergenic |
| CGGGTGGAGGTGGAACTGCT+CGG | 0.599720 | 5_1:+10849014 | None:intergenic |
| CATTCAATAAATGATGTATG+TGG | 0.600412 | 5_1:-10841832 | Msa0717170:three_prime_UTR |
| CAGGATCTTCGGAAACCGCA+CGG | 0.601814 | 5_1:+10848994 | None:intergenic |
| AGGATCTTCGGAAACCGCAC+GGG | 0.602644 | 5_1:+10848995 | None:intergenic |
| CAACTTGGCTCGATATCAAG+TGG | 0.603146 | 5_1:-10847339 | Msa0717170:CDS |
| GCTTTGATGGCTATTACTGG+TGG | 0.604486 | 5_1:-10846833 | Msa0717170:intron |
| TCAATCAAATGAAAGCGGCT+GGG | 0.605321 | 5_1:-10846906 | Msa0717170:CDS |
| TGGTGCTGCAGCGTTAACTG+GGG | 0.607305 | 5_1:-10846858 | Msa0717170:CDS |
| TGTTCAACCAAATTCTGAGA+AGG | 0.608278 | 5_1:-10847623 | Msa0717170:CDS |
| AAGTTAGGTATGCACTGCAG+TGG | 0.609080 | 5_1:-10844540 | Msa0717170:intron |
| GGCGTCAGATACGACGGTGA+TGG | 0.609613 | 5_1:+10849140 | None:intergenic |
| ATCTGGATTCCCATGCATGA+GGG | 0.611725 | 5_1:-10842032 | Msa0717170:three_prime_UTR |
| TGATGCATTAGGAATTGCGA+TGG | 0.614024 | 5_1:-10844385 | Msa0717170:intron |
| CCGACGCAAAGATACGCCGC+CGG | 0.617305 | 5_1:-10849119 | Msa0717170:CDS |
| TTCCTAGTATCACTGTCAAG+AGG | 0.620133 | 5_1:-10842055 | Msa0717170:three_prime_UTR |
| TCGTCGGTTGAAAGGCCTAG+TGG | 0.621186 | 5_1:+10849047 | None:intergenic |
| ATCCACCTGCTCCAATAACA+GGG | 0.624992 | 5_1:+10846649 | None:intergenic |
| GATCTGGATTCCCATGCATG+AGG | 0.628572 | 5_1:-10842033 | Msa0717170:three_prime_UTR |
| TGGGCTAAATGGAAGCGGGG+TGG | 0.631302 | 5_1:-10846887 | Msa0717170:CDS |
| TGACGTGACAGATCACATTG+AGG | 0.634800 | 5_1:-10842224 | Msa0717170:CDS |
| TTGCTTATAATAGTGACCGG+AGG | 0.641341 | 5_1:+10841872 | None:intergenic |
| ACGTGACAGATCACATTGAG+GGG | 0.642524 | 5_1:-10842222 | Msa0717170:CDS |
| GAAGCTCAATCAAATGAAAG+CGG | 0.642888 | 5_1:-10846911 | Msa0717170:CDS |
| ATATGATGCTCGACATCGCG+TGG | 0.643770 | 5_1:-10847377 | Msa0717170:CDS |
| TAATGATGCTCAGCTATCAG+AGG | 0.651155 | 5_1:-10847486 | Msa0717170:CDS |
| GCATTTGGAGACTCAGCAAG+AGG | 0.654564 | 5_1:-10847593 | Msa0717170:CDS |
| GGCTGGGCTAAATGGAAGCG+GGG | 0.654811 | 5_1:-10846890 | Msa0717170:CDS |
| TGTGAAGAAGACCCACATGA+GGG | 0.654955 | 5_1:-10847550 | Msa0717170:CDS |
| AGCAACTCCAAGCATCCAGT+CGG | 0.655786 | 5_1:+10842928 | None:intergenic |
| CGGAGGTGTGGTGAACCCAA+AGG | 0.656500 | 5_1:+10848970 | None:intergenic |
| AAGTCCTGCAGCAATTGCTG+GGG | 0.658556 | 5_1:+10846704 | None:intergenic |
| ATGTGAAGAAGACCCACATG+AGG | 0.660740 | 5_1:-10847551 | Msa0717170:CDS |
| AGATACGACGGTGATGGCGA+CGG | 0.662016 | 5_1:+10849146 | None:intergenic |
| AAGGCCGAATAAGGCTCCGG+CGG | 0.663516 | 5_1:+10849103 | None:intergenic |
| CTGATTTCATAGACAGCACG+TGG | 0.666987 | 5_1:-10844278 | Msa0717170:CDS |
| GCTCGGAGAAGGAAAATCGT+CGG | 0.671840 | 5_1:+10849031 | None:intergenic |
| GACAGAATGACAATTTGGAG+AGG | 0.673864 | 5_1:-10845413 | Msa0717170:intron |
| TGCGTCGGCGTCAGATACGA+CGG | 0.673915 | 5_1:+10849134 | None:intergenic |
| GGTGCTGCAGCGTTAACTGG+GGG | 0.675962 | 5_1:-10846857 | Msa0717170:CDS |
| TGTTAGAAGATCCCTCATGT+GGG | 0.677660 | 5_1:+10847539 | None:intergenic |
| GCAGAGTGATCGGAGTAACA+CGG | 0.687754 | 5_1:+10849196 | None:intergenic |
| GTTGTGCTTGGTGTAGAGCA+AGG | 0.697211 | 5_1:+10849084 | None:intergenic |
| GATGGAGCTGATGAAGCAAG+GGG | 0.698223 | 5_1:-10844367 | Msa0717170:CDS |
| AGTGATCGGAGTAACACGGT+GGG | 0.699849 | 5_1:+10849200 | None:intergenic |
| CAGTTCCACCTCCACCCGTG+CGG | 0.704561 | 5_1:-10849009 | Msa0717170:CDS |
| GCTGTCTATGAAATCAGTAG+CGG | 0.709438 | 5_1:+10844284 | None:intergenic |
| AACGGGGCGAAGCAAACCGG+AGG | 0.710297 | 5_1:+10848953 | None:intergenic |
| TTGGCTGAAACGGAAAACCA+TGG | 0.713308 | 5_1:-10843390 | Msa0717170:intron |
| ATAGGTGACAACCATAACCA+AGG | 0.717351 | 5_1:-10845689 | Msa0717170:CDS |
| GAGTGATCGGAGTAACACGG+TGG | 0.750661 | 5_1:+10849199 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGAATTAAATAATTTACT+CGG | - | chr5_1:10842532-10842551 | Msa0717170:intron | 10.0% |
| !!! | GTTTTAGTTTTTTTTAAATA+AGG | - | chr5_1:10845990-10846009 | Msa0717170:intron | 10.0% |
| !!! | TTTGTTTCTTTTAATATTTT+TGG | - | chr5_1:10847737-10847756 | Msa0717170:CDS | 10.0% |
| !!! | GGATATTTTTAAAATATATT+TGG | - | chr5_1:10848723-10848742 | Msa0717170:intron | 10.0% |
| !!! | CTAATAATTTTAGTATCTTT+TGG | + | chr5_1:10843005-10843024 | None:intergenic | 15.0% |
| !! | AAAAAAACACAAAATATACT+CGG | - | chr5_1:10843680-10843699 | Msa0717170:intron | 15.0% |
| !!! | GATTATTATTTTTATATGCT+CGG | - | chr5_1:10843804-10843823 | Msa0717170:intron | 15.0% |
| !!! | ATTATTATTTTTATATGCTC+GGG | - | chr5_1:10843805-10843824 | Msa0717170:intron | 15.0% |
| !! | TGATTATATGTTATAAGATT+TGG | - | chr5_1:10843997-10844016 | Msa0717170:intron | 15.0% |
| !!! | TTCTATTTTAATCTGTTTTT+AGG | - | chr5_1:10845201-10845220 | Msa0717170:intron | 15.0% |
| !! | TTACTATTATTATCTAGAAA+AGG | + | chr5_1:10845285-10845304 | None:intergenic | 15.0% |
| !!! | AAAACAAATAACTTTTCATA+TGG | - | chr5_1:10846519-10846538 | Msa0717170:intron | 15.0% |
| !! | AATAAATAAGAAATTACGAA+TGG | + | chr5_1:10847446-10847465 | None:intergenic | 15.0% |
| !! | AATATTAAAAGAAACAAAGT+AGG | + | chr5_1:10847735-10847754 | None:intergenic | 15.0% |
| !! | AATTGGAATTTATAGTTTAA+TGG | - | chr5_1:10848806-10848825 | Msa0717170:intron | 15.0% |
| !!! | AATTTATAGTTTAATGGATA+TGG | - | chr5_1:10848812-10848831 | Msa0717170:intron | 15.0% |
| !!! | GTAAAAAGTTTTAAACAGTT+AGG | - | chr5_1:10842385-10842404 | Msa0717170:intron | 20.0% |
| !!! | TAAGTATGCTTTTTAAATCA+TGG | - | chr5_1:10842566-10842585 | Msa0717170:intron | 20.0% |
| !! | TAGAAGAACAAGAATAAAAA+AGG | + | chr5_1:10842834-10842853 | None:intergenic | 20.0% |
| !!! | GTATTTTTGTGTATAAAGTT+TGG | - | chr5_1:10843157-10843176 | Msa0717170:intron | 20.0% |
| !!! | AACCAATTTTTTATATGTTG+AGG | - | chr5_1:10843828-10843847 | Msa0717170:intron | 20.0% |
| !! | AACCTCAACATATAAAAAAT+TGG | + | chr5_1:10843833-10843852 | None:intergenic | 20.0% |
| !! | ATAATTAAATTTCACTTTGC+AGG | - | chr5_1:10844092-10844111 | Msa0717170:intron | 20.0% |
| !! | TCAAAACACAAAATATGTTA+TGG | + | chr5_1:10844299-10844318 | None:intergenic | 20.0% |
| !!! | TGTTGTTTAATGATATTATC+AGG | - | chr5_1:10844601-10844620 | Msa0717170:intron | 20.0% |
| !! | TAAGCATATGAATAATGATT+TGG | + | chr5_1:10844631-10844650 | None:intergenic | 20.0% |
| !!! | TACGTCCTATATTTTATTAT+CGG | - | chr5_1:10845129-10845148 | Msa0717170:intron | 20.0% |
| !! | ATTATCGAAATGACATTTAT+TGG | + | chr5_1:10845728-10845747 | None:intergenic | 20.0% |
| !! | CATTTCGATAATCATTATTT+AGG | - | chr5_1:10845736-10845755 | Msa0717170:CDS | 20.0% |
| !! | ACAATATCAAAAACTAAAGA+AGG | + | chr5_1:10845844-10845863 | None:intergenic | 20.0% |
| !!! | TTTAGTTTTTGATATTGTGT+TGG | - | chr5_1:10845846-10845865 | Msa0717170:intron | 20.0% |
| !!! | TTTTTAAATAAGGTGATTCA+TGG | - | chr5_1:10846000-10846019 | Msa0717170:intron | 20.0% |
| !! | CTTTAACAATTCAATTAGTT+TGG | - | chr5_1:10846080-10846099 | Msa0717170:intron | 20.0% |
| !!! | TTTCTTTCTTGTCTTTTATT+TGG | - | chr5_1:10846144-10846163 | Msa0717170:intron | 20.0% |
| !! | CAAAAATAAGTGGTATAAAA+AGG | + | chr5_1:10846358-10846377 | None:intergenic | 20.0% |
| !!! | ACAGGTTTAATTTTATCTTT+TGG | - | chr5_1:10846849-10846868 | Msa0717170:CDS | 20.0% |
| !!! | TTTTTTTGAAGAAGCTAAAA+TGG | - | chr5_1:10846946-10846965 | Msa0717170:CDS | 20.0% |
| !! | TTCATAGTTCATATACTTTA+CGG | + | chr5_1:10847323-10847342 | None:intergenic | 20.0% |
| !!! | TATGAAAAATCAATGTGTTT+TGG | - | chr5_1:10847337-10847356 | Msa0717170:CDS | 20.0% |
| !!! | ATGAAAAATCAATGTGTTTT+GGG | - | chr5_1:10847338-10847357 | Msa0717170:CDS | 20.0% |
| !! | AAAGTAAAGTAAACTTAGAT+AGG | + | chr5_1:10847472-10847491 | None:intergenic | 20.0% |
| !!! | ATATTTTTAATCTGAGTTTC+AGG | - | chr5_1:10847618-10847637 | Msa0717170:CDS | 20.0% |
| !! | GATTTATAAATGCTTATTCA+AGG | - | chr5_1:10848139-10848158 | Msa0717170:intron | 20.0% |
| !! | TTCAGTCCAAAATAAAAAAA+TGG | - | chr5_1:10848284-10848303 | Msa0717170:intron | 20.0% |
| !! | TCCAAAATAAAAAAATGGAA+TGG | - | chr5_1:10848289-10848308 | Msa0717170:intron | 20.0% |
| !!! | TTTCTTCTTGTTTGAATATA+AGG | - | chr5_1:10849005-10849024 | Msa0717170:CDS | 20.0% |
| ! | ATAGAAACGTACATAAAAAC+GGG | + | chr5_1:10842158-10842177 | None:intergenic | 25.0% |
| ! | GATAGAAACGTACATAAAAA+CGG | + | chr5_1:10842159-10842178 | None:intergenic | 25.0% |
| !!! | AAGTTTTAAACAGTTAGGAA+AGG | - | chr5_1:10842390-10842409 | Msa0717170:intron | 25.0% |
| !!! | TAGTTTTCAATTTGTTTGTG+AGG | - | chr5_1:10843022-10843041 | Msa0717170:intron | 25.0% |
| ! | TAACAGTAATAAACATAGCT+TGG | + | chr5_1:10843066-10843085 | None:intergenic | 25.0% |
| ! | TTCTTTACTTACTATTGCAT+TGG | - | chr5_1:10843127-10843146 | Msa0717170:CDS | 25.0% |
| !! | ATGATGATGATAATGCTAAA+AGG | - | chr5_1:10843305-10843324 | Msa0717170:intron | 25.0% |
| ! | TATAATCATGTAGAAGAATC+AGG | + | chr5_1:10843985-10844004 | None:intergenic | 25.0% |
| ! | TTTAGAAGTAGAAGATATGA+GGG | + | chr5_1:10844068-10844087 | None:intergenic | 25.0% |
| ! | ATTTAGAAGTAGAAGATATG+AGG | + | chr5_1:10844069-10844088 | None:intergenic | 25.0% |
| ! | TATATATGTCCATGTTTGAT+TGG | - | chr5_1:10844534-10844553 | Msa0717170:CDS | 25.0% |
| ! | TCTAAAAATCCAATCAAACA+TGG | + | chr5_1:10844546-10844565 | None:intergenic | 25.0% |
| ! | CTTATGTTTCTTAGAGATTT+AGG | - | chr5_1:10844647-10844666 | Msa0717170:intron | 25.0% |
| ! | TTTATAGCTCATTAACAATC+TGG | - | chr5_1:10845085-10845104 | Msa0717170:intron | 25.0% |
| ! | AAAATATAGGACGTACTAAT+GGG | + | chr5_1:10845124-10845143 | None:intergenic | 25.0% |
| ! | TAAAATATAGGACGTACTAA+TGG | + | chr5_1:10845125-10845144 | None:intergenic | 25.0% |
| !! | ACGTCCTATATTTTATTATC+GGG | - | chr5_1:10845130-10845149 | Msa0717170:intron | 25.0% |
| ! | CATCATTAGCACTAAAAAAA+GGG | + | chr5_1:10845260-10845279 | None:intergenic | 25.0% |
| ! | ACATCATTAGCACTAAAAAA+AGG | + | chr5_1:10845261-10845280 | None:intergenic | 25.0% |
| !!! | TTTGTCGTATTCTTACTTTT+TGG | - | chr5_1:10845442-10845461 | Msa0717170:CDS | 25.0% |
| !! | AAGTATTGCTATACAATACA+AGG | + | chr5_1:10845537-10845556 | None:intergenic | 25.0% |
| ! | TATCAAAAACTAAAGAAGGA+AGG | + | chr5_1:10845840-10845859 | None:intergenic | 25.0% |
| ! | AGACAAAATATATTCACTCA+TGG | + | chr5_1:10846027-10846046 | None:intergenic | 25.0% |
| ! | TACAAATGTAAAGAAACTGT+GGG | + | chr5_1:10846459-10846478 | None:intergenic | 25.0% |
| ! | TTACAAATGTAAAGAAACTG+TGG | + | chr5_1:10846460-10846479 | None:intergenic | 25.0% |
| !!! | GAAAAGTTATTTGTTTTGCT+AGG | + | chr5_1:10846516-10846535 | None:intergenic | 25.0% |
| !! | CAATATTTCTATGATGCATT+AGG | - | chr5_1:10846695-10846714 | Msa0717170:CDS | 25.0% |
| !! | AATAGAATTTTTGCAAAGCA+TGG | - | chr5_1:10846882-10846901 | Msa0717170:CDS | 25.0% |
| ! | TCATAGTTCATATACTTTAC+GGG | + | chr5_1:10847322-10847341 | None:intergenic | 25.0% |
| !! | TGAAAAATCAATGTGTTTTG+GGG | - | chr5_1:10847339-10847358 | Msa0717170:CDS | 25.0% |
| ! | TAGAAAGGTAGAAATGAATT+CGG | - | chr5_1:10848011-10848030 | Msa0717170:intron | 25.0% |
| !!! | GCCATTCCATTTTTTTATTT+TGG | + | chr5_1:10848293-10848312 | None:intergenic | 25.0% |
| !! | AAGCATTAAGTTGTAAGTTA+AGG | - | chr5_1:10848371-10848390 | Msa0717170:intron | 25.0% |
| !! | AGCATTAAGTTGTAAGTTAA+GGG | - | chr5_1:10848372-10848391 | Msa0717170:intron | 25.0% |
| ! | ATAAATCCAAAATCATGACA+AGG | + | chr5_1:10848484-10848503 | None:intergenic | 25.0% |
| ! | ATCCAAAAAAAACAATTGTG+TGG | + | chr5_1:10848707-10848726 | None:intergenic | 25.0% |
| ! | TATTCAAACAAGAAGAAAGT+GGG | + | chr5_1:10849003-10849022 | None:intergenic | 25.0% |
| ! | ATATTCAAACAAGAAGAAAG+TGG | + | chr5_1:10849004-10849023 | None:intergenic | 25.0% |
| !!! | ATAAGCAAAGTTGACTTTTT+AGG | - | chr5_1:10849234-10849253 | Msa0717170:five_prime_UTR | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr5_1:10849259-10849278 | Msa0717170:five_prime_UTR | 25.0% |
| CGTCAAAGTTTGTATAAAAG+CGG | + | chr5_1:10841844-10841863 | None:intergenic | 30.0% | |
| TAGAAACGTACATAAAAACG+GGG | + | chr5_1:10842157-10842176 | None:intergenic | 30.0% | |
| !! | GAAAGCATTAATCACGAAAA+TGG | + | chr5_1:10842210-10842229 | None:intergenic | 30.0% |
| ! | ATGCTTTTAGTGATGTGATA+AGG | - | chr5_1:10842466-10842485 | Msa0717170:CDS | 30.0% |
| ATGTGATAAGGATGATTGAT+AGG | - | chr5_1:10842478-10842497 | Msa0717170:intron | 30.0% | |
| GGAAAAAAATAAGAACAGTG+TGG | + | chr5_1:10843104-10843123 | None:intergenic | 30.0% | |
| GCAATAGTAAGTAAAGAAGA+CGG | + | chr5_1:10843125-10843144 | None:intergenic | 30.0% | |
| AAAAAAATTCAGAGTCTTCG+AGG | - | chr5_1:10843383-10843402 | Msa0717170:intron | 30.0% | |
| AAAATATACTCGGAGAAGAA+AGG | - | chr5_1:10843690-10843709 | Msa0717170:intron | 30.0% | |
| AAATATACTCGGAGAAGAAA+GGG | - | chr5_1:10843691-10843710 | Msa0717170:intron | 30.0% | |
| ATTAAATTTCACTTTGCAGG+AGG | - | chr5_1:10844095-10844114 | Msa0717170:intron | 30.0% | |
| GAATTGAACAAGTTTCTTTG+TGG | - | chr5_1:10844322-10844341 | Msa0717170:CDS | 30.0% | |
| !! | TTCACTTTTAAGCACAAAAC+AGG | - | chr5_1:10844356-10844375 | Msa0717170:CDS | 30.0% |
| CATATATATACCTCCAAATG+AGG | + | chr5_1:10844522-10844541 | None:intergenic | 30.0% | |
| ! | GCATATGAATAATGATTTGG+TGG | + | chr5_1:10844628-10844647 | None:intergenic | 30.0% |
| !! | TATTTTCAATCTGGGGTTTT+GGG | - | chr5_1:10844677-10844696 | Msa0717170:intron | 30.0% |
| AACTACTAGTCAAACTGTAA+AGG | - | chr5_1:10844816-10844835 | Msa0717170:intron | 30.0% | |
| ACTACTAGTCAAACTGTAAA+GGG | - | chr5_1:10844817-10844836 | Msa0717170:intron | 30.0% | |
| GTTCAATTCATATACACTGT+CGG | - | chr5_1:10844901-10844920 | Msa0717170:intron | 30.0% | |
| TCATACCTCATTAATTGATG+TGG | - | chr5_1:10844997-10845016 | Msa0717170:intron | 30.0% | |
| TGCTCCCGATAATAAAATAT+AGG | + | chr5_1:10845137-10845156 | None:intergenic | 30.0% | |
| ! | ATATTTTATTATCGGGAGCA+CGG | - | chr5_1:10845137-10845156 | Msa0717170:intron | 30.0% |
| AGGACATATTTATGATCTGT+AGG | - | chr5_1:10845221-10845240 | Msa0717170:intron | 30.0% | |
| GAATTTGAATTCAGAGCTAT+AGG | - | chr5_1:10845384-10845403 | Msa0717170:intron | 30.0% | |
| GAAGTAATAAGAGTCTGATA+TGG | + | chr5_1:10845579-10845598 | None:intergenic | 30.0% | |
| ! | TTGAGGAAGATGATTTTGTA+AGG | - | chr5_1:10845645-10845664 | Msa0717170:intron | 30.0% |
| GAAATGACATTTATTGGAGA+TGG | + | chr5_1:10845722-10845741 | None:intergenic | 30.0% | |
| GGATTATCAAAGTCAATTGA+AGG | + | chr5_1:10845819-10845838 | None:intergenic | 30.0% | |
| ! | ACAATTCAATTAGTTTGGTC+TGG | - | chr5_1:10846085-10846104 | Msa0717170:intron | 30.0% |
| TGGTCTGGGAAATATTTAAA+AGG | - | chr5_1:10846105-10846124 | Msa0717170:intron | 30.0% | |
| !!! | TATACCACTTATTTTTGTGC+AGG | - | chr5_1:10846361-10846380 | Msa0717170:intron | 30.0% |
| AAAACCTGCACAAAAATAAG+TGG | + | chr5_1:10846368-10846387 | None:intergenic | 30.0% | |
| GTTAATACCCTAATGATTCA+TGG | - | chr5_1:10846489-10846508 | Msa0717170:intron | 30.0% | |
| ! | TATTGCATACGTGTTTTCTT+CGG | + | chr5_1:10847071-10847090 | None:intergenic | 30.0% |
| TATGTAGGTCGTATACTATA+AGG | + | chr5_1:10847107-10847126 | None:intergenic | 30.0% | |
| CATAGTTCATATACTTTACG+GGG | + | chr5_1:10847321-10847340 | None:intergenic | 30.0% | |
| ! | CATGTCGTTTGTCTAAAAAA+GGG | + | chr5_1:10847393-10847412 | None:intergenic | 30.0% |
| ACAAACGACATGGTAAAAAA+AGG | - | chr5_1:10847401-10847420 | Msa0717170:CDS | 30.0% | |
| !! | TTTACTTTTCAGATCAGACA+AGG | - | chr5_1:10847484-10847503 | Msa0717170:CDS | 30.0% |
| ! | TTGCATATTCCATCGTTTTA+AGG | + | chr5_1:10847599-10847618 | None:intergenic | 30.0% |
| ! | GATTGTTTTCCTTTCTTTAC+TGG | - | chr5_1:10847774-10847793 | Msa0717170:intron | 30.0% |
| TAATAGTTCATGTCTATGTG+AGG | - | chr5_1:10847856-10847875 | Msa0717170:intron | 30.0% | |
| AAAAAGCTCCTTCTGTTTAT+TGG | - | chr5_1:10847915-10847934 | Msa0717170:intron | 30.0% | |
| ATATCCTTGTATTCTGTAGA+TGG | - | chr5_1:10848107-10848126 | Msa0717170:intron | 30.0% | |
| ! | GCATTAAGTTGTAAGTTAAG+GGG | - | chr5_1:10848373-10848392 | Msa0717170:intron | 30.0% |
| TCAATGCACATATGAAATAC+TGG | + | chr5_1:10848421-10848440 | None:intergenic | 30.0% | |
| ! | AAACTTACATTTTGGATTCC+AGG | + | chr5_1:10848670-10848689 | None:intergenic | 30.0% |
| ! | GGATGGAAAAACTTACATTT+TGG | + | chr5_1:10848678-10848697 | None:intergenic | 30.0% |
| !!! | CACCACACAATTGTTTTTTT+TGG | - | chr5_1:10848702-10848721 | Msa0717170:intron | 30.0% |
| AGGAAGAATGCTGTTATAAA+CGG | + | chr5_1:10848959-10848978 | None:intergenic | 30.0% | |
| ACTTTGCTTATAATAGTGAC+CGG | + | chr5_1:10849225-10849244 | None:intergenic | 30.0% | |
| !! | TTGATATTGATTCTGCAGCA+TGG | - | chr5_1:10842264-10842283 | Msa0717170:intron | 35.0% |
| TGATACGTAGAATGACATAC+CGG | + | chr5_1:10842341-10842360 | None:intergenic | 35.0% | |
| ATGTCATTCTACGTATCATG+TGG | - | chr5_1:10842343-10842362 | Msa0717170:intron | 35.0% | |
| TTAGGAAAGGAAATCACACT+CGG | - | chr5_1:10842403-10842422 | Msa0717170:intron | 35.0% | |
| ATCCTTTGTTCGTATAGTGA+GGG | - | chr5_1:10842623-10842642 | Msa0717170:intron | 35.0% | |
| !! | TTCGATCAAAAGTGCTACAT+AGG | + | chr5_1:10842664-10842683 | None:intergenic | 35.0% |
| ! | TATGTAGCACTTTTGATCGA+AGG | - | chr5_1:10842663-10842682 | Msa0717170:intron | 35.0% |
| CAGTAATAAACATAGCTTGG+TGG | + | chr5_1:10843063-10843082 | None:intergenic | 35.0% | |
| ! | ACTTACTATTGCATTGGTGT+CGG | - | chr5_1:10843133-10843152 | Msa0717170:CDS | 35.0% |
| CTCAGAATTTGGTTGAACAT+CGG | + | chr5_1:10843467-10843486 | None:intergenic | 35.0% | |
| ! | TGTTCAACCAAATTCTGAGA+AGG | - | chr5_1:10843468-10843487 | Msa0717170:intron | 35.0% |
| ATGTCTACCTTCTCAGAATT+TGG | + | chr5_1:10843478-10843497 | None:intergenic | 35.0% | |
| TCTAACAGTAAGACTGATGA+AGG | - | chr5_1:10843568-10843587 | Msa0717170:CDS | 35.0% | |
| AGCATCATTAACTCTTCAAC+TGG | + | chr5_1:10843595-10843614 | None:intergenic | 35.0% | |
| CGATATCAAGTGGACAAAAA+TGG | - | chr5_1:10843762-10843781 | Msa0717170:intron | 35.0% | |
| !! | GATAGTTTCTAGTTCTGCAA+TGG | - | chr5_1:10844128-10844147 | Msa0717170:intron | 35.0% |
| GAAGCTCAATCAAATGAAAG+CGG | - | chr5_1:10844180-10844199 | Msa0717170:intron | 35.0% | |
| !! | CTATTTTCAATCTGGGGTTT+TGG | - | chr5_1:10844676-10844695 | Msa0717170:intron | 35.0% |
| CACAAAAAACCATCACATTG+AGG | + | chr5_1:10844708-10844727 | None:intergenic | 35.0% | |
| !!! | GGTTTTTTGTGCTACATTAC+TGG | - | chr5_1:10844717-10844736 | Msa0717170:intron | 35.0% |
| ! | GTTTGAATTGCCTTTTCACA+AGG | - | chr5_1:10844844-10844863 | Msa0717170:intron | 35.0% |
| ! | AGTTTTACACATGCATCCAA+TGG | - | chr5_1:10844932-10844951 | Msa0717170:intron | 35.0% |
| ATGATGTGTCAATACACCAT+TGG | + | chr5_1:10844951-10844970 | None:intergenic | 35.0% | |
| TGTTGCCACATCAATTAATG+AGG | + | chr5_1:10845005-10845024 | None:intergenic | 35.0% | |
| ATAGCTCATTAACAATCTGG+TGG | - | chr5_1:10845088-10845107 | Msa0717170:intron | 35.0% | |
| !! | TATTTTATTATCGGGAGCAC+GGG | - | chr5_1:10845138-10845157 | Msa0717170:intron | 35.0% |
| ATCAATAAATGCTTACGCCT+TGG | + | chr5_1:10845422-10845441 | None:intergenic | 35.0% | |
| ATCTTCCTCAAAGACAAATC+CGG | + | chr5_1:10845636-10845655 | None:intergenic | 35.0% | |
| ! | AAGATGATTTTGTAAGGCCA+TGG | - | chr5_1:10845651-10845670 | Msa0717170:intron | 35.0% |
| ! | AGATGATTTTGTAAGGCCAT+GGG | - | chr5_1:10845652-10845671 | Msa0717170:intron | 35.0% |
| CATTTATTGGAGATGGAAAG+TGG | + | chr5_1:10845715-10845734 | None:intergenic | 35.0% | |
| TGCAATACTGAGAATAGACT+AGG | + | chr5_1:10845872-10845891 | None:intergenic | 35.0% | |
| CTCAGTATTGCATTATGTTG+TGG | - | chr5_1:10845880-10845899 | Msa0717170:intron | 35.0% | |
| !!! | TATTTTTTCACCATTTGCCC+TGG | - | chr5_1:10846220-10846239 | Msa0717170:intron | 35.0% |
| TTGAAATAGTTCACAGACCA+GGG | + | chr5_1:10846240-10846259 | None:intergenic | 35.0% | |
| ! | TTTGAAATAGTTCACAGACC+AGG | + | chr5_1:10846241-10846260 | None:intergenic | 35.0% |
| TGGTCTGTGAACTATTTCAA+AGG | - | chr5_1:10846240-10846259 | Msa0717170:intron | 35.0% | |
| GCTAACAGCAATTAGATTCT+TGG | + | chr5_1:10846581-10846600 | None:intergenic | 35.0% | |
| !! | GGAGTTTCTATCGTTTTTGA+TGG | - | chr5_1:10846903-10846922 | Msa0717170:CDS | 35.0% |
| !!! | TTTCTTCGGTTTTGTTTAGC+CGG | + | chr5_1:10847057-10847076 | None:intergenic | 35.0% |
| AGATACAGGTTCCACTTAAA+GGG | + | chr5_1:10847240-10847259 | None:intergenic | 35.0% | |
| AAACTAATCCTTCGAGATAC+AGG | + | chr5_1:10847254-10847273 | None:intergenic | 35.0% | |
| !! | TATCTCGAAGGATTAGTTTC+TGG | - | chr5_1:10847255-10847274 | Msa0717170:intron | 35.0% |
| !!! | TTTACGGGGTTCCTTTTTTT+TGG | + | chr5_1:10847307-10847326 | None:intergenic | 35.0% |
| !!! | AAAATCAATGTGTTTTGGGG+TGG | - | chr5_1:10847342-10847361 | Msa0717170:CDS | 35.0% |
| ! | CCATGTCGTTTGTCTAAAAA+AGG | + | chr5_1:10847394-10847413 | None:intergenic | 35.0% |
| !!! | CCTTTTTTAGACAAACGACA+TGG | - | chr5_1:10847391-10847410 | Msa0717170:CDS | 35.0% |
| ACACTTATAGGTTACTCACT+TGG | - | chr5_1:10847647-10847666 | Msa0717170:CDS | 35.0% | |
| ! | TTTCAAGTGTCTAGAGTGTT+TGG | - | chr5_1:10847682-10847701 | Msa0717170:CDS | 35.0% |
| TTCCTTTCTTTACTGGTCAA+AGG | - | chr5_1:10847781-10847800 | Msa0717170:intron | 35.0% | |
| ATCCTTTGACCAGTAAAGAA+AGG | + | chr5_1:10847786-10847805 | None:intergenic | 35.0% | |
| TTCACATCCTTGATTGCAAT+GGG | + | chr5_1:10847979-10847998 | None:intergenic | 35.0% | |
| ATTCACATCCTTGATTGCAA+TGG | + | chr5_1:10847980-10847999 | None:intergenic | 35.0% | |
| TTGCAATCAAGGATGTGAAT+TGG | - | chr5_1:10847980-10847999 | Msa0717170:intron | 35.0% | |
| TGCAATCAAGGATGTGAATT+GGG | - | chr5_1:10847981-10848000 | Msa0717170:intron | 35.0% | |
| TAGTACATTCTCATTCTCAC+AGG | - | chr5_1:10848050-10848069 | Msa0717170:intron | 35.0% | |
| GAATTATCCCTATGTACTGT+GGG | + | chr5_1:10848255-10848274 | None:intergenic | 35.0% | |
| AGAATTATCCCTATGTACTG+TGG | + | chr5_1:10848256-10848275 | None:intergenic | 35.0% | |
| ATGGCTTGAAGTTGTATTTG+TGG | - | chr5_1:10848308-10848327 | Msa0717170:intron | 35.0% | |
| TTGACTTCCATATGTTGATC+TGG | - | chr5_1:10848450-10848469 | Msa0717170:intron | 35.0% | |
| TATGGATCCAGATCAACATA+TGG | + | chr5_1:10848460-10848479 | None:intergenic | 35.0% | |
| CCAAAATCATGACAAGGTTA+TGG | + | chr5_1:10848478-10848497 | None:intergenic | 35.0% | |
| ! | CCATAACCTTGTCATGATTT+TGG | - | chr5_1:10848475-10848494 | Msa0717170:intron | 35.0% |
| AACCTATCTCTCTATGGATT+AGG | + | chr5_1:10848560-10848579 | None:intergenic | 35.0% | |
| TTACTTTCTCAAGGTTTAGC+TGG | - | chr5_1:10848625-10848644 | Msa0717170:intron | 35.0% | |
| AAAACAATTGTGTGGTGAAG+AGG | + | chr5_1:10848699-10848718 | None:intergenic | 35.0% | |
| GGAAGAATGCTGTTATAAAC+GGG | + | chr5_1:10848958-10848977 | None:intergenic | 35.0% | |
| TTGGAAGTGGTTTACTCTTT+AGG | + | chr5_1:10848979-10848998 | None:intergenic | 35.0% | |
| AAACAAGAAGAAAGTGGGAT+TGG | + | chr5_1:10848998-10849017 | None:intergenic | 35.0% | |
| ! | AAGGAAAATCGTCGGTTGAA+AGG | + | chr5_1:10842055-10842074 | None:intergenic | 40.0% |
| CTCACTATACGAACAAAGGA+TGG | + | chr5_1:10842624-10842643 | None:intergenic | 40.0% | |
| CATCCTTTGTTCGTATAGTG+AGG | - | chr5_1:10842622-10842641 | Msa0717170:intron | 40.0% | |
| TCCTTTGTTCGTATAGTGAG+GGG | - | chr5_1:10842624-10842643 | Msa0717170:intron | 40.0% | |
| TACTAACACGTGTCAGACAT+CGG | + | chr5_1:10842694-10842713 | None:intergenic | 40.0% | |
| ACGAAACTAACACTTCGACA+TGG | + | chr5_1:10842794-10842813 | None:intergenic | 40.0% | |
| TTTGCCTCTTAGCACGTATT+AGG | - | chr5_1:10842873-10842892 | Msa0717170:intron | 40.0% | |
| TGCTCAGCAAAAGAGTTCAA+AGG | + | chr5_1:10842900-10842919 | None:intergenic | 40.0% | |
| ! | AACTCTTTTGCTGAGCAAGA+TGG | - | chr5_1:10842903-10842922 | Msa0717170:intron | 40.0% |
| !! | GTATAAAGTTTGGTGCTGTG+TGG | - | chr5_1:10843167-10843186 | Msa0717170:intron | 40.0% |
| ! | AGATCAAGAGCTTGCTTTGT+CGG | - | chr5_1:10843330-10843349 | Msa0717170:intron | 40.0% |
| TGAGAAGGTAGACATGCATT+TGG | - | chr5_1:10843483-10843502 | Msa0717170:intron | 40.0% | |
| TGTTAGAAGATCCCTCATGT+GGG | + | chr5_1:10843555-10843574 | None:intergenic | 40.0% | |
| TAATGATGCTCAGCTATCAG+AGG | - | chr5_1:10843605-10843624 | Msa0717170:intron | 40.0% | |
| GTAAAGAATCATCCTCACTC+TGG | - | chr5_1:10843911-10843930 | Msa0717170:intron | 40.0% | |
| TAGAAGATATGAGGGCTATG+GGG | + | chr5_1:10844060-10844079 | None:intergenic | 40.0% | |
| GTAGAAGATATGAGGGCTAT+GGG | + | chr5_1:10844061-10844080 | None:intergenic | 40.0% | |
| AGTAGAAGATATGAGGGCTA+TGG | + | chr5_1:10844062-10844081 | None:intergenic | 40.0% | |
| TCAATCAAATGAAAGCGGCT+GGG | - | chr5_1:10844185-10844204 | Msa0717170:intron | 40.0% | |
| ! | GGGATCAAAGTACCTAAAGT+TGG | + | chr5_1:10844425-10844444 | None:intergenic | 40.0% |
| GGTACTTTGATCCCTGTTAT+TGG | - | chr5_1:10844431-10844450 | Msa0717170:intron | 40.0% | |
| AGAAATCACAGAGAGCTACT+TGG | + | chr5_1:10844580-10844599 | None:intergenic | 40.0% | |
| ! | GCCAGCACTATTTTCAATCT+GGG | - | chr5_1:10844669-10844688 | Msa0717170:intron | 40.0% |
| ! | CCAGCACTATTTTCAATCTG+GGG | - | chr5_1:10844670-10844689 | Msa0717170:intron | 40.0% |
| TTGAAGAAATTACTGCACGC+AGG | + | chr5_1:10844781-10844800 | None:intergenic | 40.0% | |
| TGTGGCAACACATCAATCAA+TGG | - | chr5_1:10845015-10845034 | Msa0717170:intron | 40.0% | |
| GTGGCAACACATCAATCAAT+GGG | - | chr5_1:10845016-10845035 | Msa0717170:intron | 40.0% | |
| ACCAAAATGGCTAGAAGAGT+TGG | - | chr5_1:10845351-10845370 | Msa0717170:intron | 40.0% | |
| CCAAAATGGCTAGAAGAGTT+GGG | - | chr5_1:10845352-10845371 | Msa0717170:intron | 40.0% | |
| ATAGGTGACAACCATAACCA+AGG | - | chr5_1:10845402-10845421 | Msa0717170:intron | 40.0% | |
| AAATGCTTACGCCTTGGTTA+TGG | + | chr5_1:10845416-10845435 | None:intergenic | 40.0% | |
| TTATGATCCATGTGCATGCA+AGG | - | chr5_1:10845487-10845506 | Msa0717170:intron | 40.0% | |
| TTACTTCTGCTTGCAGAGAT+TGG | - | chr5_1:10845592-10845611 | Msa0717170:intron | 40.0% | |
| GGAAGGACAGAATGACAATT+TGG | - | chr5_1:10845673-10845692 | Msa0717170:intron | 40.0% | |
| GACAGAATGACAATTTGGAG+AGG | - | chr5_1:10845678-10845697 | Msa0717170:intron | 40.0% | |
| GCATTATACCTAGCTGATGT+GGG | + | chr5_1:10845787-10845806 | None:intergenic | 40.0% | |
| TGCATTATACCTAGCTGATG+TGG | + | chr5_1:10845788-10845807 | None:intergenic | 40.0% | |
| TTTCCGCAAAACTGGCAAAA+GGG | - | chr5_1:10845903-10845922 | Msa0717170:intron | 40.0% | |
| GAAAGATGTCTTGCCTATAG+TGG | - | chr5_1:10845956-10845975 | Msa0717170:intron | 40.0% | |
| ! | TCAATTAGTTTGGTCTGGTC+TGG | - | chr5_1:10846090-10846109 | Msa0717170:intron | 40.0% |
| ! | CAATTAGTTTGGTCTGGTCT+GGG | - | chr5_1:10846091-10846110 | Msa0717170:intron | 40.0% |
| TTCAAAGGATGCACAGTGAA+AGG | - | chr5_1:10846255-10846274 | Msa0717170:intron | 40.0% | |
| GCTAGGACCATGAATCATTA+GGG | + | chr5_1:10846499-10846518 | None:intergenic | 40.0% | |
| TGCTAGGACCATGAATCATT+AGG | + | chr5_1:10846500-10846519 | None:intergenic | 40.0% | |
| ! | ATATGGCCTTGCCAAAAGTT+AGG | - | chr5_1:10846536-10846555 | Msa0717170:intron | 40.0% |
| ! | TGCATACCTAACTTTTGGCA+AGG | + | chr5_1:10846545-10846564 | None:intergenic | 40.0% |
| ! | TGCAGTGCATACCTAACTTT+TGG | + | chr5_1:10846550-10846569 | None:intergenic | 40.0% |
| TGATGCATTAGGAATTGCGA+TGG | - | chr5_1:10846706-10846725 | Msa0717170:CDS | 40.0% | |
| !! | GAGTGCACTTTTAACTGCAT+TGG | - | chr5_1:10846763-10846782 | Msa0717170:intron | 40.0% |
| !!! | CACTTTTAACTGCATTGGCT+TGG | - | chr5_1:10846768-10846787 | Msa0717170:intron | 40.0% |
| GCTGTCTATGAAATCAGTAG+CGG | + | chr5_1:10846810-10846829 | None:intergenic | 40.0% | |
| CAAGAATCACATGTCCAAAC+CGG | - | chr5_1:10847035-10847054 | Msa0717170:intron | 40.0% | |
| GGTCGTATACTATAAGGCTT+TGG | + | chr5_1:10847101-10847120 | None:intergenic | 40.0% | |
| TGGCACAATTGGCAGATAAT+GGG | - | chr5_1:10847137-10847156 | Msa0717170:intron | 40.0% | |
| !! | CATATGGAAGAGCACTTGTT+GGG | - | chr5_1:10847205-10847224 | Msa0717170:intron | 40.0% |
| GAGATACAGGTTCCACTTAA+AGG | + | chr5_1:10847241-10847260 | None:intergenic | 40.0% | |
| !! | AAGGATTAGTTTCTGGCTTC+CGG | - | chr5_1:10847262-10847281 | Msa0717170:intron | 40.0% |
| !!! | CCTTTTTTTTGGTTGCCCAA+GGG | + | chr5_1:10847296-10847315 | None:intergenic | 40.0% |
| !!! | TCCTTTTTTTTGGTTGCCCA+AGG | + | chr5_1:10847297-10847316 | None:intergenic | 40.0% |
| ! | TTTTCAGATCAGACAAGGCA+GGG | - | chr5_1:10847489-10847508 | Msa0717170:CDS | 40.0% |
| ! | CTGCTTGCTGAAGTGTTATT+GGG | - | chr5_1:10847515-10847534 | Msa0717170:intron | 40.0% |
| AGTTCTGCTCCTTAAAACGA+TGG | - | chr5_1:10847587-10847606 | Msa0717170:CDS | 40.0% | |
| GAGTAACCTATAAGTGTCAC+AGG | + | chr5_1:10847644-10847663 | None:intergenic | 40.0% | |
| ! | TCTAGAGTGTTTGGCTGAAA+CGG | - | chr5_1:10847691-10847710 | Msa0717170:CDS | 40.0% |
| AGAGTCGAAAAGTTGTAAGG+GGG | + | chr5_1:10847818-10847837 | None:intergenic | 40.0% | |
| CAGAGTCGAAAAGTTGTAAG+GGG | + | chr5_1:10847819-10847838 | None:intergenic | 40.0% | |
| CCAGAGTCGAAAAGTTGTAA+GGG | + | chr5_1:10847820-10847839 | None:intergenic | 40.0% | |
| ACCAGAGTCGAAAAGTTGTA+AGG | + | chr5_1:10847821-10847840 | None:intergenic | 40.0% | |
| ! | AACTTTTCGACTCTGGTGAT+GGG | - | chr5_1:10847824-10847843 | Msa0717170:intron | 40.0% |
| TTCAGCTGCCAATAAACAGA+AGG | + | chr5_1:10847926-10847945 | None:intergenic | 40.0% | |
| GTAGAAAGAGTTGTCCTTCT+TGG | - | chr5_1:10847949-10847968 | Msa0717170:intron | 40.0% | |
| GCTACCATCTACAGAATACA+AGG | + | chr5_1:10848114-10848133 | None:intergenic | 40.0% | |
| TGTATTCTGTAGATGGTAGC+TGG | - | chr5_1:10848114-10848133 | Msa0717170:intron | 40.0% | |
| ! | ACATTTTCATGTACCTGGCA+CGG | + | chr5_1:10848191-10848210 | None:intergenic | 40.0% |
| ! | CCACTACATTTTCATGTACC+TGG | + | chr5_1:10848196-10848215 | None:intergenic | 40.0% |
| CCAGGTACATGAAAATGTAG+TGG | - | chr5_1:10848193-10848212 | Msa0717170:intron | 40.0% | |
| CTCACGGTCATACACAAAAA+AGG | + | chr5_1:10848526-10848545 | None:intergenic | 40.0% | |
| !!! | CTTTTTTGTGTATGACCGTG+AGG | - | chr5_1:10848524-10848543 | Msa0717170:intron | 40.0% |
| CACCTAATCCATAGAGAGAT+AGG | - | chr5_1:10848555-10848574 | Msa0717170:intron | 40.0% | |
| GTGTTCAACCTATCTCTCTA+TGG | + | chr5_1:10848566-10848585 | None:intergenic | 40.0% | |
| TTGTGCAGCTTACTTTCTCA+AGG | - | chr5_1:10848616-10848635 | Msa0717170:intron | 40.0% | |
| TGGATTCCAGGAATATCGAT+TGG | + | chr5_1:10848658-10848677 | None:intergenic | 40.0% | |
| ! | TATGATTAGTGCTAGTCTGC+TGG | - | chr5_1:10848782-10848801 | Msa0717170:intron | 40.0% |
| ! | GACATTTTGCTAAAACGCAC+TGG | - | chr5_1:10848834-10848853 | Msa0717170:intron | 40.0% |
| ! | CTAAAACGCACTGGATTTTC+AGG | - | chr5_1:10848843-10848862 | Msa0717170:intron | 40.0% |
| TTCCTAGTATCACTGTCAAG+AGG | - | chr5_1:10849036-10849055 | Msa0717170:CDS | 40.0% | |
| ATCCTCTTGACAGTGATACT+AGG | + | chr5_1:10849041-10849060 | None:intergenic | 40.0% | |
| ! | TGTTTGTTACATACTCCCTC+CGG | - | chr5_1:10849203-10849222 | Msa0717170:five_prime_UTR | 40.0% |
| TGCTTATAATAGTGACCGGA+GGG | + | chr5_1:10849221-10849240 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr5_1:10849222-10849241 | None:intergenic | 40.0% | |
| GGGTTTGATGAAGTTGTGCT+TGG | + | chr5_1:10842022-10842041 | None:intergenic | 45.0% | |
| CTTCATCAAACCCATCCACT+AGG | - | chr5_1:10842029-10842048 | Msa0717170:three_prime_UTR | 45.0% | |
| TTTCCGAAGATCCTGACCTT+TGG | - | chr5_1:10842105-10842124 | Msa0717170:three_prime_UTR | 45.0% | |
| TTCCGAAGATCCTGACCTTT+GGG | - | chr5_1:10842106-10842125 | Msa0717170:three_prime_UTR | 45.0% | |
| AACCCAAAGGTCAGGATCTT+CGG | + | chr5_1:10842111-10842130 | None:intergenic | 45.0% | |
| ! | ATTGATTCTGCAGCATGGTC+TGG | - | chr5_1:10842269-10842288 | Msa0717170:intron | 45.0% |
| TCTGGACTTGAGGAAACTTC+TGG | - | chr5_1:10842287-10842306 | Msa0717170:intron | 45.0% | |
| TCCCCTCACTATACGAACAA+AGG | + | chr5_1:10842628-10842647 | None:intergenic | 45.0% | |
| TACATGTGTACGTGTCGTGT+TGG | + | chr5_1:10842735-10842754 | None:intergenic | 45.0% | |
| AGGTCCTAATACGTGCTAAG+AGG | + | chr5_1:10842880-10842899 | None:intergenic | 45.0% | |
| ! | TCTTTTGCTGAGCAAGATGG+TGG | - | chr5_1:10842906-10842925 | Msa0717170:intron | 45.0% |
| TTTATCGACACATCGCAGCT+GGG | + | chr5_1:10842974-10842993 | None:intergenic | 45.0% | |
| ! | TTTTATCGACACATCGCAGC+TGG | + | chr5_1:10842975-10842994 | None:intergenic | 45.0% |
| ATGTGAAGAAGACCCACATG+AGG | - | chr5_1:10843540-10843559 | Msa0717170:intron | 45.0% | |
| TGTGAAGAAGACCCACATGA+GGG | - | chr5_1:10843541-10843560 | Msa0717170:intron | 45.0% | |
| CTGTTAGAAGATCCCTCATG+TGG | + | chr5_1:10843556-10843575 | None:intergenic | 45.0% | |
| ACAAACAAGCAGCGAGAAGT+TGG | + | chr5_1:10843648-10843667 | None:intergenic | 45.0% | |
| ACTTCTCGCTGCTTGTTTGT+CGG | - | chr5_1:10843648-10843667 | Msa0717170:intron | 45.0% | |
| GCTGCTTGTTTGTCGGATAT+TGG | - | chr5_1:10843655-10843674 | Msa0717170:intron | 45.0% | |
| ! | CAACTTGGCTCGATATCAAG+TGG | - | chr5_1:10843752-10843771 | Msa0717170:intron | 45.0% |
| AAGCTGTATTCACCAGAGTG+AGG | + | chr5_1:10843926-10843945 | None:intergenic | 45.0% | |
| CTCAATCAAATGAAAGCGGC+TGG | - | chr5_1:10844184-10844203 | Msa0717170:intron | 45.0% | |
| ! | GGAGCTTTGATGGCTATTAC+TGG | - | chr5_1:10844255-10844274 | Msa0717170:intron | 45.0% |
| ! | GCTTTGATGGCTATTACTGG+TGG | - | chr5_1:10844258-10844277 | Msa0717170:intron | 45.0% |
| TTGATCCCTGTTATTGGAGC+AGG | - | chr5_1:10844437-10844456 | Msa0717170:intron | 45.0% | |
| ATCCACCTGCTCCAATAACA+GGG | + | chr5_1:10844445-10844464 | None:intergenic | 45.0% | |
| AATCCACCTGCTCCAATAAC+AGG | + | chr5_1:10844446-10844465 | None:intergenic | 45.0% | |
| ! | GGCCAGCACTATTTTCAATC+TGG | - | chr5_1:10844668-10844687 | Msa0717170:intron | 45.0% |
| CCCCAGATTGAAAATAGTGC+TGG | + | chr5_1:10844673-10844692 | None:intergenic | 45.0% | |
| !! | TGGGTTGATCCTCAATGTGA+TGG | - | chr5_1:10844696-10844715 | Msa0717170:intron | 45.0% |
| TTCTAACGCGCCTTGTGAAA+AGG | + | chr5_1:10844857-10844876 | None:intergenic | 45.0% | |
| ! | TTTTCACAAGGCGCGTTAGA+AGG | - | chr5_1:10844856-10844875 | Msa0717170:intron | 45.0% |
| TTTCACAAGGCGCGTTAGAA+GGG | - | chr5_1:10844857-10844876 | Msa0717170:intron | 45.0% | |
| AACAATCTGGTGGAAACCAC+AGG | - | chr5_1:10845098-10845117 | Msa0717170:intron | 45.0% | |
| AGGGCTTACTGGAACCAAAA+TGG | - | chr5_1:10845338-10845357 | Msa0717170:intron | 45.0% | |
| ! | CCCAACTCTTCTAGCCATTT+TGG | + | chr5_1:10845355-10845374 | None:intergenic | 45.0% |
| TACATGTCCTTGCATGCACA+TGG | + | chr5_1:10845497-10845516 | None:intergenic | 45.0% | |
| GAGATTGGCGGTTGAGATAT+TGG | - | chr5_1:10845607-10845626 | Msa0717170:intron | 45.0% | |
| !! | GCGGTTGAGATATTGGTTTC+CGG | - | chr5_1:10845614-10845633 | Msa0717170:intron | 45.0% |
| GGTTTCCGGATTTGTCTTTG+AGG | - | chr5_1:10845628-10845647 | Msa0717170:intron | 45.0% | |
| ! | GATTTTGTAAGGCCATGGGA+AGG | - | chr5_1:10845656-10845675 | Msa0717170:intron | 45.0% |
| TTGTCATTCTGTCCTTCCCA+TGG | + | chr5_1:10845671-10845690 | None:intergenic | 45.0% | |
| TGTTGTGGTTTCCGCAAAAC+TGG | - | chr5_1:10845895-10845914 | Msa0717170:intron | 45.0% | |
| GTTTCCGCAAAACTGGCAAA+AGG | - | chr5_1:10845902-10845921 | Msa0717170:intron | 45.0% | |
| TTCCGCAAAACTGGCAAAAG+GGG | - | chr5_1:10845904-10845923 | Msa0717170:intron | 45.0% | |
| ! | CTTGCCTATAGTGGAGTACA+AGG | - | chr5_1:10845965-10845984 | Msa0717170:intron | 45.0% |
| AAGTTAGGTATGCACTGCAG+TGG | - | chr5_1:10846551-10846570 | Msa0717170:intron | 45.0% | |
| AGTTAGGTATGCACTGCAGT+GGG | - | chr5_1:10846552-10846571 | Msa0717170:intron | 45.0% | |
| TGCTGTTAGCACTGCAATTC+AGG | - | chr5_1:10846591-10846610 | Msa0717170:CDS | 45.0% | |
| TTAGCACTGCAATTCAGGAC+TGG | - | chr5_1:10846596-10846615 | Msa0717170:CDS | 45.0% | |
| ! | CGTGGTCAATTGCTATTGAC+AGG | - | chr5_1:10846831-10846850 | Msa0717170:intron | 45.0% |
| ATGCACATCTTGTGCTGGAA+TGG | + | chr5_1:10846990-10847009 | None:intergenic | 45.0% | |
| ATTCCAGCACAAGATGTGCA+TGG | - | chr5_1:10846989-10847008 | Msa0717170:intron | 45.0% | |
| !!! | TCGGTTTTGTTTAGCCGGTT+TGG | + | chr5_1:10847052-10847071 | None:intergenic | 45.0% |
| GACCTACATACTACATAGCG+TGG | - | chr5_1:10847117-10847136 | Msa0717170:intron | 45.0% | |
| TGCCACGCTATGTAGTATGT+AGG | + | chr5_1:10847122-10847141 | None:intergenic | 45.0% | |
| ACTACATAGCGTGGCACAAT+TGG | - | chr5_1:10847126-10847145 | Msa0717170:intron | 45.0% | |
| GTGGCACAATTGGCAGATAA+TGG | - | chr5_1:10847136-10847155 | Msa0717170:intron | 45.0% | |
| GGCACAATTGGCAGATAATG+GGG | - | chr5_1:10847138-10847157 | Msa0717170:intron | 45.0% | |
| TCCCTTAAGCATGTGAGCAT+GGG | - | chr5_1:10847161-10847180 | Msa0717170:intron | 45.0% | |
| ACCCATGCTCACATGCTTAA+GGG | + | chr5_1:10847165-10847184 | None:intergenic | 45.0% | |
| AACCCATGCTCACATGCTTA+AGG | + | chr5_1:10847166-10847185 | None:intergenic | 45.0% | |
| !! | GCATATGGAAGAGCACTTGT+TGG | - | chr5_1:10847204-10847223 | Msa0717170:intron | 45.0% |
| AAGTGGAACCTGTATCTCGA+AGG | - | chr5_1:10847243-10847262 | Msa0717170:intron | 45.0% | |
| CCCTTGGGCAACCAAAAAAA+AGG | - | chr5_1:10847293-10847312 | Msa0717170:intron | 45.0% | |
| ! | CTTTTCAGATCAGACAAGGC+AGG | - | chr5_1:10847488-10847507 | Msa0717170:CDS | 45.0% |
| ! | GCTGCTTGCTGAAGTGTTAT+TGG | - | chr5_1:10847514-10847533 | Msa0717170:intron | 45.0% |
| ! | CTTGCTGAAGTGTTATTGGG+AGG | - | chr5_1:10847518-10847537 | Msa0717170:intron | 45.0% |
| ! | AGTGTTATTGGGAGGATTGC+AGG | - | chr5_1:10847526-10847545 | Msa0717170:intron | 45.0% |
| ! | GTGTTATTGGGAGGATTGCA+GGG | - | chr5_1:10847527-10847546 | Msa0717170:intron | 45.0% |
| TTCAGGCCTGTGACACTTAT+AGG | - | chr5_1:10847635-10847654 | Msa0717170:CDS | 45.0% | |
| TTGGCTGAAACGGAAAACCA+TGG | - | chr5_1:10847701-10847720 | Msa0717170:CDS | 45.0% | |
| CTGAAACGGAAAACCATGGT+AGG | - | chr5_1:10847705-10847724 | Msa0717170:CDS | 45.0% | |
| CAAAGTAGGAACACCTACCA+TGG | + | chr5_1:10847721-10847740 | None:intergenic | 45.0% | |
| GAGTCGAAAAGTTGTAAGGG+GGG | + | chr5_1:10847817-10847836 | None:intergenic | 45.0% | |
| ! | CCCTTACAACTTTTCGACTC+TGG | - | chr5_1:10847817-10847836 | Msa0717170:intron | 45.0% |
| ! | CAACTTTTCGACTCTGGTGA+TGG | - | chr5_1:10847823-10847842 | Msa0717170:intron | 45.0% |
| !! | ACTTTTCGACTCTGGTGATG+GGG | - | chr5_1:10847825-10847844 | Msa0717170:intron | 45.0% |
| !!! | GAGGTGCTGCTTCTGTTTTT+TGG | - | chr5_1:10847875-10847894 | Msa0717170:intron | 45.0% |
| GAATTGGGAAGCTGCTAGAA+AGG | - | chr5_1:10847996-10848015 | Msa0717170:intron | 45.0% | |
| ATGCTTATTCAAGGACCGAC+TGG | - | chr5_1:10848148-10848167 | Msa0717170:intron | 45.0% | |
| GGGTCAACTGAAAGAATCGA+TGG | + | chr5_1:10848235-10848254 | None:intergenic | 45.0% | |
| TCAGTTGACCCACAGTACAT+AGG | - | chr5_1:10848244-10848263 | Msa0717170:intron | 45.0% | |
| CAGTTGACCCACAGTACATA+GGG | - | chr5_1:10848245-10848264 | Msa0717170:intron | 45.0% | |
| ATCCAGCCAATCGATATTCC+TGG | - | chr5_1:10848649-10848668 | Msa0717170:intron | 45.0% | |
| ! | TTCCAGGAATATCGATTGGC+TGG | + | chr5_1:10848654-10848673 | None:intergenic | 45.0% |
| CAATTGTGTGGTGAAGAGGA+TGG | + | chr5_1:10848695-10848714 | None:intergenic | 45.0% | |
| ! | AGTGCTAGTCTGCTGGAAAT+TGG | - | chr5_1:10848789-10848808 | Msa0717170:intron | 45.0% |
| TGACGTGACAGATCACATTG+AGG | - | chr5_1:10848867-10848886 | Msa0717170:intron | 45.0% | |
| GACGTGACAGATCACATTGA+GGG | - | chr5_1:10848868-10848887 | Msa0717170:intron | 45.0% | |
| ACGTGACAGATCACATTGAG+GGG | - | chr5_1:10848869-10848888 | Msa0717170:intron | 45.0% | |
| !! | AGGGGCACTCTTCATATTTG+TGG | - | chr5_1:10848887-10848906 | Msa0717170:intron | 45.0% |
| ! | GGGGCACTCTTCATATTTGT+GGG | - | chr5_1:10848888-10848907 | Msa0717170:intron | 45.0% |
| GATCTTGGATGAGCTTGAAC+TGG | - | chr5_1:10848921-10848940 | Msa0717170:intron | 45.0% | |
| GAAGAAAGTGGGATTGGAAG+TGG | + | chr5_1:10848992-10849011 | None:intergenic | 45.0% | |
| GTATCACTGTCAAGAGGATC+TGG | - | chr5_1:10849042-10849061 | Msa0717170:CDS | 45.0% | |
| ATCTGGATTCCCATGCATGA+GGG | - | chr5_1:10849059-10849078 | Msa0717170:CDS | 45.0% | |
| !!! | GATATTTTTAAAATATATTT+GGG | - | chr5_1:10848724-10848743 | Msa0717170:intron | 5.0% |
| AGTGATCGGAGTAACACGGT+GGG | + | chr5_1:10841894-10841913 | None:intergenic | 50.0% | |
| GCAGAGTGATCGGAGTAACA+CGG | + | chr5_1:10841898-10841917 | None:intergenic | 50.0% | |
| CTTTACGCGTGCAGAGTGAT+CGG | + | chr5_1:10841908-10841927 | None:intergenic | 50.0% | |
| GTGTAGAGCAAGGCCGAATA+AGG | + | chr5_1:10842000-10842019 | None:intergenic | 50.0% | |
| !! | GTTGTGCTTGGTGTAGAGCA+AGG | + | chr5_1:10842010-10842029 | None:intergenic | 50.0% |
| ! | GGTTGAAAGGCCTAGTGGAT+GGG | + | chr5_1:10842042-10842061 | None:intergenic | 50.0% |
| GCTCGGAGAAGGAAAATCGT+CGG | + | chr5_1:10842063-10842082 | None:intergenic | 50.0% | |
| AAAAACGGGGCGAAGCAAAC+CGG | + | chr5_1:10842144-10842163 | None:intergenic | 50.0% | |
| !! | GGAAACTTCTGGCTCTTCTG+TGG | - | chr5_1:10842298-10842317 | Msa0717170:intron | 50.0% |
| !! | GTGTCGTGTTGGTGTTGTGT+TGG | + | chr5_1:10842724-10842743 | None:intergenic | 50.0% |
| ! | GTCGGAAGCAGTTGATGCTT+TGG | - | chr5_1:10843348-10843367 | Msa0717170:intron | 50.0% |
| GCATTTGGAGACTCAGCAAG+AGG | - | chr5_1:10843498-10843517 | Msa0717170:intron | 50.0% | |
| ATATGATGCTCGACATCGCG+TGG | - | chr5_1:10843714-10843733 | Msa0717170:intron | 50.0% | |
| ATGAAAGCGGCTGGGCTAAA+TGG | - | chr5_1:10844193-10844212 | Msa0717170:intron | 50.0% | |
| TGGAAGCGGGGTGGTATTAT+TGG | - | chr5_1:10844213-10844232 | Msa0717170:intron | 50.0% | |
| !! | ATTGGTGCTGCAGCGTTAAC+TGG | - | chr5_1:10844231-10844250 | Msa0717170:intron | 50.0% |
| !! | TTGGTGCTGCAGCGTTAACT+GGG | - | chr5_1:10844232-10844251 | Msa0717170:intron | 50.0% |
| ! | GTTAACTGGGGGAGCTTTGA+TGG | - | chr5_1:10844245-10844264 | Msa0717170:intron | 50.0% |
| AAGTCCTGCAGCAATTGCTG+GGG | + | chr5_1:10844390-10844409 | None:intergenic | 50.0% | |
| CAAGTCCTGCAGCAATTGCT+GGG | + | chr5_1:10844391-10844410 | None:intergenic | 50.0% | |
| ! | GGTGCTTTGGCTCCAACTTT+AGG | - | chr5_1:10844410-10844429 | Msa0717170:intron | 50.0% |
| ATCCCTGTTATTGGAGCAGG+TGG | - | chr5_1:10844440-10844459 | Msa0717170:intron | 50.0% | |
| ! | GTTGCTGTTGCTGCCTCATT+TGG | - | chr5_1:10844506-10844525 | Msa0717170:CDS | 50.0% |
| GCGCGTTAGAAGGGTTGTAT+GGG | - | chr5_1:10844866-10844885 | Msa0717170:intron | 50.0% | |
| CTCTTTGTTCAACCAGCTGC+TGG | - | chr5_1:10845312-10845331 | Msa0717170:intron | 50.0% | |
| CTTCTGCTTGCAGAGATTGG+CGG | - | chr5_1:10845595-10845614 | Msa0717170:intron | 50.0% | |
| GTTAAGCTCCCACATCAGCT+AGG | - | chr5_1:10845776-10845795 | Msa0717170:intron | 50.0% | |
| ! | AGCCCCTTTTGCCAGTTTTG+CGG | + | chr5_1:10845909-10845928 | None:intergenic | 50.0% |
| ACTGGCAAAAGGGGCTAAAG+TGG | - | chr5_1:10845913-10845932 | Msa0717170:intron | 50.0% | |
| ! | GCCTATAGTGGAGTACAAGG+CGG | - | chr5_1:10845968-10845987 | Msa0717170:intron | 50.0% |
| ACCGCCTTGTACTCCACTAT+AGG | + | chr5_1:10845972-10845991 | None:intergenic | 50.0% | |
| AGTTCACAGACCAGGGCAAA+TGG | + | chr5_1:10846233-10846252 | None:intergenic | 50.0% | |
| CGATGGAGCTGATGAAGCAA+GGG | - | chr5_1:10846723-10846742 | Msa0717170:intron | 50.0% | |
| GATGGAGCTGATGAAGCAAG+GGG | - | chr5_1:10846724-10846743 | Msa0717170:intron | 50.0% | |
| ACTCCATGCACATCTTGTGC+TGG | + | chr5_1:10846995-10847014 | None:intergenic | 50.0% | |
| AGCACAAGATGTGCATGGAG+TGG | - | chr5_1:10846994-10847013 | Msa0717170:intron | 50.0% | |
| GTCCCTTAAGCATGTGAGCA+TGG | - | chr5_1:10847160-10847179 | Msa0717170:intron | 50.0% | |
| TCCATATGCACCACCAAGCA+GGG | + | chr5_1:10847193-10847212 | None:intergenic | 50.0% | |
| TTCCATATGCACCACCAAGC+AGG | + | chr5_1:10847194-10847213 | None:intergenic | 50.0% | |
| GGAGAGGTCAACCCTTTAAG+TGG | - | chr5_1:10847226-10847245 | Msa0717170:intron | 50.0% | |
| !! | ATTAGTTTCTGGCTTCCGGC+TGG | - | chr5_1:10847266-10847285 | Msa0717170:intron | 50.0% |
| !! | TTAGTTTCTGGCTTCCGGCT+GGG | - | chr5_1:10847267-10847286 | Msa0717170:intron | 50.0% |
| TGGGAGGATTGCAGGGAAAT+AGG | - | chr5_1:10847534-10847553 | Msa0717170:intron | 50.0% | |
| TTGCAATGGGTGCTCCAAGA+AGG | + | chr5_1:10847966-10847985 | None:intergenic | 50.0% | |
| ! | TGGAGCACCCATTGCAATCA+AGG | - | chr5_1:10847969-10847988 | Msa0717170:intron | 50.0% |
| AGCAACTCCAAGCATCCAGT+CGG | + | chr5_1:10848166-10848185 | None:intergenic | 50.0% | |
| TTAGGTGAGACAGTGCCTCA+CGG | + | chr5_1:10848542-10848561 | None:intergenic | 50.0% | |
| ! | GTGGGCTACACAACAGATCT+TGG | - | chr5_1:10848906-10848925 | Msa0717170:intron | 50.0% |
| GATCTGGATTCCCATGCATG+AGG | - | chr5_1:10849058-10849077 | Msa0717170:CDS | 50.0% | |
| GAGTGATCGGAGTAACACGG+TGG | + | chr5_1:10841895-10841914 | None:intergenic | 55.0% | |
| ! | AGATACGACGGTGATGGCGA+CGG | + | chr5_1:10841948-10841967 | None:intergenic | 55.0% |
| AGCAAGGCCGAATAAGGCTC+CGG | + | chr5_1:10841994-10842013 | None:intergenic | 55.0% | |
| CGGTTGAAAGGCCTAGTGGA+TGG | + | chr5_1:10842043-10842062 | None:intergenic | 55.0% | |
| ! | TCGTCGGTTGAAAGGCCTAG+TGG | + | chr5_1:10842047-10842066 | None:intergenic | 55.0% |
| AGGATCTTCGGAAACCGCAC+GGG | + | chr5_1:10842099-10842118 | None:intergenic | 55.0% | |
| CAGGATCTTCGGAAACCGCA+CGG | + | chr5_1:10842100-10842119 | None:intergenic | 55.0% | |
| GTGTGGTGAACCCAAAGGTC+AGG | + | chr5_1:10842119-10842138 | None:intergenic | 55.0% | |
| ! | CTTTGGGTTCACCACACCTC+CGG | - | chr5_1:10842122-10842141 | Msa0717170:exon | 55.0% |
| TGCAGCATGGTCTGGACTTG+AGG | - | chr5_1:10842277-10842296 | Msa0717170:intron | 55.0% | |
| TTCTGTGGCTACGCGTCATG+TGG | - | chr5_1:10842313-10842332 | Msa0717170:intron | 55.0% | |
| TCTGTGGCTACGCGTCATGT+GGG | - | chr5_1:10842314-10842333 | Msa0717170:intron | 55.0% | |
| CTCTACGGCTGCTTGCAACT+TGG | - | chr5_1:10843737-10843756 | Msa0717170:intron | 55.0% | |
| !! | TGGTGCTGCAGCGTTAACTG+GGG | - | chr5_1:10844233-10844252 | Msa0717170:intron | 55.0% |
| CCAAGTCCTGCAGCAATTGC+TGG | + | chr5_1:10844392-10844411 | None:intergenic | 55.0% | |
| CCAGCAATTGCTGCAGGACT+TGG | - | chr5_1:10844389-10844408 | Msa0717170:intron | 55.0% | |
| !! | TGCTGCAGGACTTGGTGCTT+TGG | - | chr5_1:10844397-10844416 | Msa0717170:intron | 55.0% |
| AGTGCAGCAGGAACTGTTGC+TGG | - | chr5_1:10844479-10844498 | Msa0717170:intron | 55.0% | |
| GCTGTTGCTGCCTCATTTGG+AGG | - | chr5_1:10844509-10844528 | Msa0717170:CDS | 55.0% | |
| GGCGCGTTAGAAGGGTTGTA+TGG | - | chr5_1:10844865-10844884 | Msa0717170:intron | 55.0% | |
| ! | AGGACGTACTAATGGGCCTG+TGG | + | chr5_1:10845117-10845136 | None:intergenic | 55.0% |
| TTCAACCAGCTGCTGGAGCA+GGG | - | chr5_1:10845319-10845338 | Msa0717170:intron | 55.0% | |
| GCGATGGAGCTGATGAAGCA+AGG | - | chr5_1:10846722-10846741 | Msa0717170:intron | 55.0% | |
| GCATGGGTTTGATCCCTGCT+TGG | - | chr5_1:10847177-10847196 | Msa0717170:intron | 55.0% | |
| TGGGTTTGATCCCTGCTTGG+TGG | - | chr5_1:10847180-10847199 | Msa0717170:intron | 55.0% | |
| !! | TCCCTGCTTGGTGGTGCATA+TGG | - | chr5_1:10847189-10847208 | Msa0717170:intron | 55.0% |
| !! | GGAAGAGCACTTGTTGGGAG+AGG | - | chr5_1:10847210-10847229 | Msa0717170:intron | 55.0% |
| !! | TAGTTTCTGGCTTCCGGCTG+GGG | - | chr5_1:10847268-10847287 | Msa0717170:intron | 55.0% |
| TCAAGGACCGACTGGATGCT+TGG | - | chr5_1:10848156-10848175 | Msa0717170:intron | 55.0% | |
| ! | TTGGAGTTGCTTTCCGTGCC+AGG | - | chr5_1:10848175-10848194 | Msa0717170:intron | 55.0% |
| ATTCCCATGCATGAGGGCTG+AGG | - | chr5_1:10849065-10849084 | Msa0717170:CDS | 55.0% | |
| GGCGTCAGATACGACGGTGA+TGG | + | chr5_1:10841954-10841973 | None:intergenic | 60.0% | |
| ! | TGCGTCGGCGTCAGATACGA+CGG | + | chr5_1:10841960-10841979 | None:intergenic | 60.0% |
| !! | TACGCCGCCGGAGCCTTATT+CGG | - | chr5_1:10841984-10842003 | Msa0717170:three_prime_UTR | 60.0% |
| AAGGCCGAATAAGGCTCCGG+CGG | + | chr5_1:10841991-10842010 | None:intergenic | 60.0% | |
| GAGGTGGAACTGCTCGGAGA+AGG | + | chr5_1:10842074-10842093 | None:intergenic | 60.0% | |
| ATCTTCGGAAACCGCACGGG+TGG | + | chr5_1:10842096-10842115 | None:intergenic | 60.0% | |
| ! | CGGAGGTGTGGTGAACCCAA+AGG | + | chr5_1:10842124-10842143 | None:intergenic | 60.0% |
| ! | CTCGACATCGCGTGGCTCTA+CGG | - | chr5_1:10843722-10843741 | Msa0717170:intron | 60.0% |
| GCGGCTGGGCTAAATGGAAG+CGG | - | chr5_1:10844199-10844218 | Msa0717170:intron | 60.0% | |
| CGGCTGGGCTAAATGGAAGC+GGG | - | chr5_1:10844200-10844219 | Msa0717170:intron | 60.0% | |
| GGCTGGGCTAAATGGAAGCG+GGG | - | chr5_1:10844201-10844220 | Msa0717170:intron | 60.0% | |
| TGGGCTAAATGGAAGCGGGG+TGG | - | chr5_1:10844204-10844223 | Msa0717170:intron | 60.0% | |
| ! | GGTGCTGCAGCGTTAACTGG+GGG | - | chr5_1:10844234-10844253 | Msa0717170:intron | 60.0% |
| GTTCAACCAGCTGCTGGAGC+AGG | - | chr5_1:10845318-10845337 | Msa0717170:intron | 60.0% | |
| GTAGCGGCAAGCAATGCAGC+TGG | + | chr5_1:10846794-10846813 | None:intergenic | 60.0% | |
| ACGCCTCAGCCCTCATGCAT+GGG | + | chr5_1:10849071-10849090 | None:intergenic | 60.0% | |
| CCGGCGGCGTATCTTTGCGT+CGG | + | chr5_1:10841975-10841994 | None:intergenic | 65.0% | |
| CCGACGCAAAGATACGCCGC+CGG | - | chr5_1:10841972-10841991 | Msa0717170:three_prime_UTR | 65.0% | |
| CGGGTGGAGGTGGAACTGCT+CGG | + | chr5_1:10842080-10842099 | None:intergenic | 65.0% | |
| CAGTTCCACCTCCACCCGTG+CGG | - | chr5_1:10842082-10842101 | Msa0717170:three_prime_UTR | 65.0% | |
| TTCGGAAACCGCACGGGTGG+AGG | + | chr5_1:10842093-10842112 | None:intergenic | 65.0% | |
| GGCGAAGCAAACCGGAGGTG+TGG | + | chr5_1:10842136-10842155 | None:intergenic | 65.0% | |
| AACGGGGCGAAGCAAACCGG+AGG | + | chr5_1:10842141-10842160 | None:intergenic | 65.0% | |
| GGCTACGCGTCATGTGGGAC+CGG | - | chr5_1:10842319-10842338 | Msa0717170:intron | 65.0% | |
| GCTGCCCCAGCAATTGCTGC+AGG | - | chr5_1:10844383-10844402 | Msa0717170:intron | 65.0% | |
| GCAGCAGCTGCTAGTGCAGC+AGG | - | chr5_1:10844467-10844486 | Msa0717170:intron | 65.0% | |
| GTAAGCCCTGCTCCAGCAGC+TGG | + | chr5_1:10845327-10845346 | None:intergenic | 65.0% | |
| GCTGCTGGAGCAGGGCTTAC+TGG | - | chr5_1:10845327-10845346 | Msa0717170:intron | 65.0% | |
| CTTCCGGCTGGGGATCCCTT+GGG | - | chr5_1:10847278-10847297 | Msa0717170:intron | 65.0% | |
| TTGCCCAAGGGATCCCCAGC+CGG | + | chr5_1:10847284-10847303 | None:intergenic | 65.0% | |
| CACGCCTCAGCCCTCATGCA+TGG | + | chr5_1:10849072-10849091 | None:intergenic | 65.0% | |
| GGAAACCGCACGGGTGGAGG+TGG | + | chr5_1:10842090-10842109 | None:intergenic | 70.0% | |
| GCTTCCGGCTGGGGATCCCT+TGG | - | chr5_1:10847277-10847296 | Msa0717170:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 10841830 | 10849283 | 10841830 | ID=Msa0717170;Name=Msa0717170 |
| chr5_1 | mRNA | 10841830 | 10849283 | 10841830 | ID=Msa0717170-mRNA-1;Parent=Msa0717170;Name=Msa0717170-mRNA-1;_AED=0.13;_eAED=0.13;_QI=103|0.85|0.86|1|0.71|0.8|15|296|620 |
| chr5_1 | exon | 10841830 | 10842248 | 10841830 | ID=Msa0717170-mRNA-1:exon:4430;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10842432 | 10842489 | 10842432 | ID=Msa0717170-mRNA-1:exon:4429;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10842917 | 10842987 | 10842917 | ID=Msa0717170-mRNA-1:exon:4428;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10843096 | 10843172 | 10843096 | ID=Msa0717170-mRNA-1:exon:4427;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10843391 | 10843473 | 10843391 | ID=Msa0717170-mRNA-1:exon:4426;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10843558 | 10843617 | 10843558 | ID=Msa0717170-mRNA-1:exon:4425;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10844261 | 10844396 | 10844261 | ID=Msa0717170-mRNA-1:exon:4424;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10844485 | 10844555 | 10844485 | ID=Msa0717170-mRNA-1:exon:4423;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10845414 | 10845505 | 10845414 | ID=Msa0717170-mRNA-1:exon:4422;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10845688 | 10845785 | 10845688 | ID=Msa0717170-mRNA-1:exon:4421;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10846583 | 10846735 | 10846583 | ID=Msa0717170-mRNA-1:exon:4420;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10846834 | 10846999 | 10846834 | ID=Msa0717170-mRNA-1:exon:4419;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10847330 | 10847523 | 10847330 | ID=Msa0717170-mRNA-1:exon:4418;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10847539 | 10847786 | 10847539 | ID=Msa0717170-mRNA-1:exon:4417;Parent=Msa0717170-mRNA-1 |
| chr5_1 | exon | 10848948 | 10849283 | 10848948 | ID=Msa0717170-mRNA-1:exon:4416;Parent=Msa0717170-mRNA-1 |
| chr5_1 | five_prime_UTR | 10849181 | 10849283 | 10849181 | ID=Msa0717170-mRNA-1:five_prime_utr;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10848948 | 10849180 | 10848948 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10847539 | 10847786 | 10847539 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10847330 | 10847523 | 10847330 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10846834 | 10846999 | 10846834 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10846583 | 10846735 | 10846583 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10845688 | 10845785 | 10845688 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10845414 | 10845505 | 10845414 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10844485 | 10844555 | 10844485 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10844261 | 10844396 | 10844261 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10843558 | 10843617 | 10843558 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10843391 | 10843473 | 10843391 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10843096 | 10843172 | 10843096 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10842917 | 10842987 | 10842917 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10842432 | 10842489 | 10842432 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | CDS | 10842126 | 10842248 | 10842126 | ID=Msa0717170-mRNA-1:cds;Parent=Msa0717170-mRNA-1 |
| chr5_1 | three_prime_UTR | 10841830 | 10842125 | 10841830 | ID=Msa0717170-mRNA-1:three_prime_utr;Parent=Msa0717170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
