Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799590 | sp|Q91WU4|TMCO4_MOUSE | 39.542 | 306 | 165 | 5 | 304 | 594 | 219 | 519 | 1.55e-60 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799590 | G7KGC8 | 89.205 | 667 | 10 | 3 | 2 | 606 | 6 | 672 | 0.0 | 1181 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0717170 | Msa0799590 | 0.844149 | 9.042617e-59 | -8.615850e-47 |
| Msa0721340 | Msa0799590 | 0.806401 | 8.373648e-50 | -8.615850e-47 |
| Msa0746170 | Msa0799590 | 0.808498 | 3.006634e-50 | -8.615850e-47 |
| Msa0746210 | Msa0799590 | 0.810717 | 1.003020e-50 | -8.615850e-47 |
| Msa0758240 | Msa0799590 | 0.826186 | 3.114465e-54 | -8.615850e-47 |
| Msa0799590 | Msa0861470 | 0.804205 | 2.415777e-49 | -8.615850e-47 |
| Msa0799590 | Msa0877710 | 0.817857 | 2.652364e-52 | -8.615850e-47 |
| Msa0799590 | Msa1011090 | 0.803516 | 3.358747e-49 | -8.615850e-47 |
| Msa0799590 | Msa1072900 | 0.814128 | 1.803704e-51 | -8.615850e-47 |
| Msa0799590 | Msa1297530 | 0.801084 | 1.063920e-48 | -8.615850e-47 |
| Msa0799590 | Msa1332050 | 0.812415 | 4.289176e-51 | -8.615850e-47 |
| Msa0799590 | Msa1384100 | 0.800028 | 1.746050e-48 | -8.615850e-47 |
| Msa0799590 | Msa1444120 | 0.810182 | 1.308827e-50 | -8.615850e-47 |
| Msa0388730 | Msa0799590 | 0.817774 | 2.769475e-52 | -8.615850e-47 |
| Msa0347750 | Msa0799590 | 0.818359 | 2.043029e-52 | -8.615850e-47 |
| Msa0482940 | Msa0799590 | 0.801955 | 7.051256e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799590 | MtrunA17_Chr5g0405021 | 89.205 | 667 | 10 | 3 | 2 | 606 | 6 | 672 | 0.0 | 1181 |
| Msa0799590 | MtrunA17_Chr8g0372231 | 66.716 | 679 | 149 | 8 | 1 | 602 | 1 | 679 | 0.0 | 787 |
| Msa0799590 | MtrunA17_Chr3g0142241 | 54.932 | 659 | 218 | 10 | 8 | 600 | 4 | 649 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799590 | AT4G36210.3 | 60.896 | 670 | 183 | 7 | 10 | 603 | 6 | 672 | 0.0 | 721 |
| Msa0799590 | AT2G18100.1 | 59.271 | 658 | 197 | 7 | 10 | 603 | 6 | 656 | 0.0 | 690 |
| Msa0799590 | AT4G36210.1 | 66.004 | 553 | 158 | 5 | 78 | 603 | 1 | 550 | 0.0 | 660 |
| Msa0799590 | AT2G18100.4 | 65.257 | 544 | 164 | 6 | 78 | 603 | 1 | 537 | 0.0 | 640 |
| Msa0799590 | AT2G18100.2 | 57.877 | 603 | 183 | 7 | 10 | 548 | 6 | 601 | 0.0 | 602 |
| Msa0799590 | AT4G36210.2 | 59.494 | 553 | 160 | 8 | 78 | 603 | 1 | 516 | 0.0 | 560 |
| Msa0799590 | AT2G18100.3 | 54.455 | 505 | 159 | 7 | 10 | 450 | 6 | 503 | 4.88e-152 | 447 |
Find 176 sgRNAs with CRISPR-Local
Find 515 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAACTCTTCTAGCCATTT+TGG | 0.167539 | 5_3:+12869009 | None:intergenic |
| TTTCTTCTTGTTTGAATATA+AGG | 0.204854 | 5_3:-12865226 | Msa0799590:three_prime_UTR |
| ATGTCTACCTTCTCAGAATT+TGG | 0.225485 | 5_3:+12870886 | None:intergenic |
| GTAGAAAGAGTTGTCCTTCT+TGG | 0.231742 | 5_3:-12866287 | Msa0799590:CDS |
| TGCTGTTAGCACTGCAATTC+AGG | 0.234360 | 5_3:-12867645 | Msa0799590:CDS |
| ATTGGTGCTGCAGCGTTAAC+TGG | 0.234571 | 5_3:-12870130 | Msa0799590:CDS |
| GCTAACAGCAATTAGATTCT+TGG | 0.236840 | 5_3:+12867658 | None:intergenic |
| GCTGCTTGCTGAAGTGTTAT+TGG | 0.241912 | 5_3:-12866722 | Msa0799590:CDS |
| TTGGAAGTGGTTTACTCTTT+AGG | 0.258343 | 5_3:+12865255 | None:intergenic |
| ATGAAAGCGGCTGGGCTAAA+TGG | 0.260246 | 5_3:-12870168 | Msa0799590:CDS |
| GGAGCTTTGATGGCTATTAC+TGG | 0.270982 | 5_3:-12870106 | Msa0799590:CDS |
| TTCAGGCCTGTGACACTTAT+AGG | 0.271286 | 5_3:-12866601 | Msa0799590:intron |
| GGTACTTTGATCCCTGTTAT+TGG | 0.273900 | 5_3:-12869930 | Msa0799590:CDS |
| GGTGCTTTGGCTCCAACTTT+AGG | 0.280082 | 5_3:-12869951 | Msa0799590:CDS |
| TGGAAGCGGGGTGGTATTAT+TGG | 0.283623 | 5_3:-12870148 | Msa0799590:CDS |
| GTTGCTGTTGCTGCCTCATT+TGG | 0.285743 | 5_3:-12869855 | Msa0799590:CDS |
| GCTGCTGGAGCAGGGCTTAC+TGG | 0.292566 | 5_3:-12869034 | Msa0799590:CDS |
| TGGGAGGATTGCAGGGAAAT+AGG | 0.293851 | 5_3:-12866702 | Msa0799590:intron |
| CCAGCAATTGCTGCAGGACT+TGG | 0.300014 | 5_3:-12869972 | Msa0799590:CDS |
| GCTGCTTGTTTGTCGGATAT+TGG | 0.303036 | 5_3:-12870706 | Msa0799590:CDS |
| TGCTGCAGGACTTGGTGCTT+TGG | 0.304867 | 5_3:-12869964 | Msa0799590:CDS |
| CCAAGTCCTGCAGCAATTGC+TGG | 0.316918 | 5_3:+12869972 | None:intergenic |
| AATCCACCTGCTCCAATAAC+AGG | 0.326832 | 5_3:+12869918 | None:intergenic |
| TTTCAAGTGTCTAGAGTGTT+TGG | 0.336058 | 5_3:-12866554 | Msa0799590:CDS |
| TTCCGAAGATCCTGACCTTT+GGG | 0.339715 | 5_3:-12872273 | Msa0799590:CDS |
| GTGTAGAGCAAGGCCGAATA+AGG | 0.353145 | 5_3:+12872382 | None:intergenic |
| GTTCAACCAGCTGCTGGAGC+AGG | 0.355459 | 5_3:-12869043 | Msa0799590:intron |
| AGGGGCACTCTTCATATTTG+TGG | 0.356835 | 5_3:-12865344 | Msa0799590:CDS |
| TTTCCGAAGATCCTGACCTT+TGG | 0.358293 | 5_3:-12872274 | Msa0799590:CDS |
| AGGAAGAATGCTGTTATAAA+CGG | 0.362048 | 5_3:+12865275 | None:intergenic |
| GGAAGGACAGAATGACAATT+TGG | 0.368053 | 5_3:-12868539 | Msa0799590:CDS |
| CTGCTTGCTGAAGTGTTATT+GGG | 0.370710 | 5_3:-12866721 | Msa0799590:CDS |
| GATCTTGGATGAACTTGAAC+TGG | 0.378442 | 5_3:-12865310 | Msa0799590:CDS |
| GTCGGAAGCAGTTGATGCTT+TGG | 0.382178 | 5_3:-12871013 | Msa0799590:CDS |
| TACGCCGCCGGAGCCTTATT+CGG | 0.383035 | 5_3:-12872395 | Msa0799590:CDS |
| TGGAGCACCCATTGCAATCA+AGG | 0.383681 | 5_3:-12866267 | Msa0799590:CDS |
| TTGCAATCAAGGATGTGAAT+TGG | 0.393972 | 5_3:-12866256 | Msa0799590:CDS |
| AGTGTTATTGGGAGGATTGC+AGG | 0.394836 | 5_3:-12866710 | Msa0799590:CDS |
| AACCCAAAGGTCAGGATCTT+CGG | 0.395361 | 5_3:+12872271 | None:intergenic |
| GAATTTGAATTCAGAGCTAT+AGG | 0.402036 | 5_3:-12868977 | Msa0799590:CDS |
| GGGGCACTCTTCATATTTGT+GGG | 0.405661 | 5_3:-12865343 | Msa0799590:CDS |
| TTGATCCCTGTTATTGGAGC+AGG | 0.410189 | 5_3:-12869924 | Msa0799590:CDS |
| ACTTCTCGCTGCTTGTTTGT+CGG | 0.412094 | 5_3:-12870713 | Msa0799590:CDS |
| GTATCACTGTCAAGAGGATC+TGG | 0.414890 | 5_3:-12865189 | Msa0799590:three_prime_UTR |
| TGAGAAGGTAGACATGCATT+TGG | 0.418213 | 5_3:-12870878 | Msa0799590:CDS |
| AGGGCTTACTGGAACCAAAA+TGG | 0.418715 | 5_3:-12869023 | Msa0799590:CDS |
| CTCAATCAAATGAAAGCGGC+TGG | 0.419874 | 5_3:-12870177 | Msa0799590:CDS |
| CTCTACAGCTGCTTGCAACT+TGG | 0.426478 | 5_3:-12870624 | Msa0799590:CDS |
| ATCCAGCCAATCGATATTCC+TGG | 0.430455 | 5_3:-12865585 | Msa0799590:CDS |
| TGCAATCAAGGATGTGAATT+GGG | 0.430976 | 5_3:-12866255 | Msa0799590:CDS |
| TTGGAGTTGCTTTCCGTGCC+AGG | 0.433689 | 5_3:-12866059 | Msa0799590:intron |
| AGCATCATTAACTCTTCAAC+TGG | 0.436371 | 5_3:+12870769 | None:intergenic |
| GGAAGAATGCTGTTATAAAC+GGG | 0.436745 | 5_3:+12865276 | None:intergenic |
| TTCGGAAACCGCAGCGGTGG+CGG | 0.438379 | 5_3:+12872289 | None:intergenic |
| TTCACATCCTTGATTGCAAT+GGG | 0.439203 | 5_3:+12866260 | None:intergenic |
| AGTGCAGCAGGAACTGTTGC+TGG | 0.439323 | 5_3:-12869882 | Msa0799590:CDS |
| CAAGTCCTGCAGCAATTGCT+GGG | 0.440501 | 5_3:+12869973 | None:intergenic |
| GTGGGCTACACAACAGATCT+TGG | 0.444379 | 5_3:-12865325 | Msa0799590:CDS |
| ACCAAAATGGCTAGAAGAGT+TGG | 0.449353 | 5_3:-12869010 | Msa0799590:CDS |
| TTACTTTCTCAAGGTTTAGC+TGG | 0.449702 | 5_3:-12865609 | Msa0799590:CDS |
| AAATGCTTACGCCTTGGTTA+CGG | 0.450112 | 5_3:+12868948 | None:intergenic |
| AGATCAAGAGCTTGCTTTGT+CGG | 0.453941 | 5_3:-12871031 | Msa0799590:CDS |
| CGTGGTCAATTGCTATTGAC+AGG | 0.454328 | 5_3:-12867405 | Msa0799590:intron |
| TTCCAGGAATATCGATTGGC+TGG | 0.457728 | 5_3:+12865583 | None:intergenic |
| ATCCCTGTTATTGGAGCAGG+TGG | 0.457983 | 5_3:-12869921 | Msa0799590:CDS |
| GCTGTTGCTGCCTCATTTGG+AGG | 0.458581 | 5_3:-12869852 | Msa0799590:intron |
| CTTTGGGTTCACGACACCTC+CGG | 0.463768 | 5_3:-12872257 | Msa0799590:CDS |
| AAAATATACTCGGAGAAGAA+AGG | 0.464904 | 5_3:-12870671 | Msa0799590:CDS |
| AAACAAGAAGAAAGTGGGAT+TGG | 0.466158 | 5_3:+12865236 | None:intergenic |
| TCAAGGACCGACTGGATGCT+TGG | 0.466749 | 5_3:-12866078 | Msa0799590:CDS |
| TTCAACCAGCTGCTGGAGCA+GGG | 0.470259 | 5_3:-12869042 | Msa0799590:intron |
| CGGTTGAAAGGCCTAGTGGA+TGG | 0.475310 | 5_3:+12872339 | None:intergenic |
| TTGGTGCTGCAGCGTTAACT+GGG | 0.480718 | 5_3:-12870129 | Msa0799590:CDS |
| TGTATTCTGTAGATGGTAGC+TGG | 0.481297 | 5_3:-12866120 | Msa0799590:intron |
| TCTAGAGTGTTTGGCTGAAA+CGG | 0.481964 | 5_3:-12866545 | Msa0799590:CDS |
| GATTTATAAATGCTTATTCA+AGG | 0.483497 | 5_3:-12866095 | Msa0799590:CDS |
| GCAGCAGCTGCTAGTGCAGC+AGG | 0.484812 | 5_3:-12869894 | Msa0799590:CDS |
| GTGTTATTGGGAGGATTGCA+GGG | 0.490048 | 5_3:-12866709 | Msa0799590:CDS |
| ATCCTCTTGACAGTGATACT+AGG | 0.499651 | 5_3:+12865193 | None:intergenic |
| GGAAACCGCAGCGGTGGCGG+TGG | 0.503743 | 5_3:+12872292 | None:intergenic |
| GAAGAAAGTGGGATTGGAAG+TGG | 0.505061 | 5_3:+12865242 | None:intergenic |
| AAATATACTCGGAGAAGAAA+GGG | 0.505514 | 5_3:-12870670 | Msa0799590:CDS |
| GCTGCCCCAGCAATTGCTGC+AGG | 0.505868 | 5_3:-12869978 | Msa0799590:CDS |
| CGGCTGGGCTAAATGGAAGC+GGG | 0.507116 | 5_3:-12870161 | Msa0799590:CDS |
| GGGTTTGATGAAGTTGTGCT+TGG | 0.508794 | 5_3:+12872360 | None:intergenic |
| TTGTCATTCTGTCCTTCCCA+TGG | 0.510320 | 5_3:+12868544 | None:intergenic |
| TGGATTCCAGGAATATCGAT+TGG | 0.510632 | 5_3:+12865579 | None:intergenic |
| GTGTCGTGAACCCAAAGGTC+AGG | 0.511732 | 5_3:+12872263 | None:intergenic |
| ACAAACAAGCAGCGAGAAGT+TGG | 0.514127 | 5_3:+12870716 | None:intergenic |
| ATTCACATCCTTGATTGCAA+TGG | 0.515597 | 5_3:+12866259 | None:intergenic |
| CACGCCTCAGCCCTCATGCA+TGG | 0.516826 | 5_3:+12865162 | None:intergenic |
| CGTCAAAGTTTGTATAAAAG+CGG | 0.517072 | 5_3:+12872538 | None:intergenic |
| GGTTGAAAGGCCTAGTGGAT+GGG | 0.518842 | 5_3:+12872340 | None:intergenic |
| GGGATCAAAGTACCTAAAGT+TGG | 0.520544 | 5_3:+12869939 | None:intergenic |
| TTGTGCAGCTTACTTTCTCA+AGG | 0.525281 | 5_3:-12865618 | Msa0799590:intron |
| AAGGAAAATCGTCGGTTGAA+AGG | 0.533123 | 5_3:+12872327 | None:intergenic |
| CCAAAATGGCTAGAAGAGTT+GGG | 0.533798 | 5_3:-12869009 | Msa0799590:CDS |
| ATTCCCATGCATGAGGGCTG+AGG | 0.534301 | 5_3:-12865166 | Msa0799590:three_prime_UTR |
| GTAGCGGCAAGCAATGCAGC+TGG | 0.535934 | 5_3:+12867445 | None:intergenic |
| GAATTGGGAAGCTGCTAGAA+AGG | 0.536710 | 5_3:-12866240 | Msa0799590:intron |
| ATGCTTATTCAAGGACCGAC+TGG | 0.538674 | 5_3:-12866086 | Msa0799590:CDS |
| GCGATGGAGCTGATGAAGCA+AGG | 0.546216 | 5_3:-12867514 | Msa0799590:CDS |
| GCGGTGGAACTGCTCGGAGA+AGG | 0.546454 | 5_3:+12872308 | None:intergenic |
| TGTTTGTTACATACTCCCTC+CGG | 0.547632 | 5_3:-12865028 | Msa0799590:three_prime_UTR |
| CATATCTATACCTCCAAATG+AGG | 0.549045 | 5_3:+12869842 | None:intergenic |
| AGCAAGGCCGAATAAGGCTC+CGG | 0.549379 | 5_3:+12872388 | None:intergenic |
| TTAGCACTGCAATTCAGGAC+TGG | 0.550601 | 5_3:-12867640 | Msa0799590:CDS |
| ACACTTATAGGTTACTCACT+TGG | 0.556518 | 5_3:-12866589 | Msa0799590:CDS |
| GAGTAACCTATAAGTGTCAC+AGG | 0.557832 | 5_3:+12866595 | None:intergenic |
| GATAGTTTCTAGTTCTGCAA+TGG | 0.559035 | 5_3:-12870233 | Msa0799590:CDS |
| ACTTTGCTTATAATAGTGAC+CGG | 0.559334 | 5_3:+12865009 | None:intergenic |
| CGATGGAGCTGATGAAGCAA+GGG | 0.561275 | 5_3:-12867513 | Msa0799590:CDS |
| CCGGCGGCGTATCTTTGCGT+CGG | 0.563162 | 5_3:+12872407 | None:intergenic |
| GACGTGACAGATCACATTGA+GGG | 0.564107 | 5_3:-12865363 | Msa0799590:CDS |
| CTCAGAATTTGGTTGAACAT+CGG | 0.566336 | 5_3:+12870897 | None:intergenic |
| ACGCCTCAGCCCTCATGCAT+GGG | 0.566595 | 5_3:+12865163 | None:intergenic |
| TATTCAAACAAGAAGAAAGT+GGG | 0.566950 | 5_3:+12865231 | None:intergenic |
| CTTTACGCGTGCAGAGTGAT+CGG | 0.569485 | 5_3:+12872474 | None:intergenic |
| ATCTTCGGAAACCGCAGCGG+TGG | 0.576598 | 5_3:+12872286 | None:intergenic |
| CTTGCTGAAGTGTTATTGGG+AGG | 0.576868 | 5_3:-12866718 | Msa0799590:CDS |
| GCGGCTGGGCTAAATGGAAG+CGG | 0.579262 | 5_3:-12870162 | Msa0799590:CDS |
| TTGCAATGGGTGCTCCAAGA+AGG | 0.580918 | 5_3:+12866273 | None:intergenic |
| CTGTTAGAAGATCCCTCATG+TGG | 0.581332 | 5_3:+12870808 | None:intergenic |
| CAGTTCCACCGCCACCGCTG+CGG | 0.589897 | 5_3:-12872297 | Msa0799590:CDS |
| GCGGTGGCGGTGGAACTGCT+CGG | 0.590541 | 5_3:+12872302 | None:intergenic |
| ATATTCAAACAAGAAGAAAG+TGG | 0.590551 | 5_3:+12865230 | None:intergenic |
| CTTCATCAAACCCATCCACT+AGG | 0.593594 | 5_3:-12872350 | Msa0799590:CDS |
| AGTTAGGTATGCACTGCAGT+GGG | 0.595357 | 5_3:-12867684 | Msa0799590:intron |
| TGCTTATAATAGTGACCGGA+GGG | 0.596213 | 5_3:+12865013 | None:intergenic |
| CATTCAATAAATGATGTATG+TGG | 0.600412 | 5_3:-12864972 | Msa0799590:three_prime_UTR |
| CAACTTGGCTCGATATCAAG+TGG | 0.603146 | 5_3:-12870609 | Msa0799590:CDS |
| GCTTTGATGGCTATTACTGG+TGG | 0.604486 | 5_3:-12870103 | Msa0799590:intron |
| TCAATCAAATGAAAGCGGCT+GGG | 0.605321 | 5_3:-12870176 | Msa0799590:CDS |
| TGGTGCTGCAGCGTTAACTG+GGG | 0.607305 | 5_3:-12870128 | Msa0799590:CDS |
| TGTTCAACCAAATTCTGAGA+AGG | 0.608278 | 5_3:-12870893 | Msa0799590:CDS |
| AAGTTAGGTATGCACTGCAG+TGG | 0.609080 | 5_3:-12867685 | Msa0799590:intron |
| GGCGTCAGATACGACGGTGA+TGG | 0.609613 | 5_3:+12872428 | None:intergenic |
| ATCTGGATTCCCATGCATGA+GGG | 0.611725 | 5_3:-12865172 | Msa0799590:three_prime_UTR |
| TGATGCATTAGGAATTGCGA+TGG | 0.614024 | 5_3:-12867530 | Msa0799590:intron |
| CCGACGCAAAGATACGCCGC+CGG | 0.617305 | 5_3:-12872407 | Msa0799590:CDS |
| TTCCTAGTATCACTGTCAAG+AGG | 0.620133 | 5_3:-12865195 | Msa0799590:three_prime_UTR |
| TCGTCGGTTGAAAGGCCTAG+TGG | 0.621186 | 5_3:+12872335 | None:intergenic |
| ATCCACCTGCTCCAATAACA+GGG | 0.624992 | 5_3:+12869919 | None:intergenic |
| GATCTGGATTCCCATGCATG+AGG | 0.628572 | 5_3:-12865173 | Msa0799590:three_prime_UTR |
| TGGGCTAAATGGAAGCGGGG+TGG | 0.631302 | 5_3:-12870157 | Msa0799590:CDS |
| TGACGTGACAGATCACATTG+AGG | 0.634800 | 5_3:-12865364 | Msa0799590:CDS |
| TTGCTTATAATAGTGACCGG+AGG | 0.641341 | 5_3:+12865012 | None:intergenic |
| ACGTGACAGATCACATTGAG+GGG | 0.642524 | 5_3:-12865362 | Msa0799590:CDS |
| GAAGCTCAATCAAATGAAAG+CGG | 0.642888 | 5_3:-12870181 | Msa0799590:CDS |
| ATATGATGCTCGACATCGCG+TGG | 0.643770 | 5_3:-12870647 | Msa0799590:CDS |
| TAATGATGCTCAGCTATCAG+AGG | 0.651155 | 5_3:-12870756 | Msa0799590:CDS |
| GCATTTGGAGACTCAGCAAG+AGG | 0.654564 | 5_3:-12870863 | Msa0799590:CDS |
| GGCTGGGCTAAATGGAAGCG+GGG | 0.654811 | 5_3:-12870160 | Msa0799590:CDS |
| TGTGAAGAAGACCCACATGA+GGG | 0.654955 | 5_3:-12870820 | Msa0799590:CDS |
| AGCAACTCCAAGCATCCAGT+CGG | 0.655786 | 5_3:+12866071 | None:intergenic |
| AAGTCCTGCAGCAATTGCTG+GGG | 0.658556 | 5_3:+12869974 | None:intergenic |
| CGGAGGTGTCGTGAACCCAA+AGG | 0.660352 | 5_3:+12872258 | None:intergenic |
| ATGTGAAGAAGACCCACATG+AGG | 0.660740 | 5_3:-12870821 | Msa0799590:CDS |
| AGATACGACGGTGATGGCGA+CGG | 0.662016 | 5_3:+12872434 | None:intergenic |
| AAGGCCGAATAAGGCTCCGG+CGG | 0.663516 | 5_3:+12872391 | None:intergenic |
| CTGATTTCATAGACAGCACG+TGG | 0.666987 | 5_3:-12867423 | Msa0799590:CDS |
| GCTCGGAGAAGGAAAATCGT+CGG | 0.671840 | 5_3:+12872319 | None:intergenic |
| GACAGAATGACAATTTGGAG+AGG | 0.673864 | 5_3:-12868534 | Msa0799590:intron |
| TGCGTCGGCGTCAGATACGA+CGG | 0.673915 | 5_3:+12872422 | None:intergenic |
| GGTGCTGCAGCGTTAACTGG+GGG | 0.675962 | 5_3:-12870127 | Msa0799590:CDS |
| TGTTAGAAGATCCCTCATGT+GGG | 0.677660 | 5_3:+12870809 | None:intergenic |
| ATAGGTGACAACCGTAACCA+AGG | 0.678119 | 5_3:-12868959 | Msa0799590:CDS |
| GCAGAGTGATCGGAGTAACA+CGG | 0.687754 | 5_3:+12872484 | None:intergenic |
| GTTGTGCTTGGTGTAGAGCA+AGG | 0.697211 | 5_3:+12872372 | None:intergenic |
| GATGGAGCTGATGAAGCAAG+GGG | 0.698223 | 5_3:-12867512 | Msa0799590:CDS |
| AGTGATCGGAGTAACACGGT+GGG | 0.699849 | 5_3:+12872488 | None:intergenic |
| AGGATCTTCGGAAACCGCAG+CGG | 0.707050 | 5_3:+12872283 | None:intergenic |
| GCTGTCTATGAAATCAGTAG+CGG | 0.709438 | 5_3:+12867429 | None:intergenic |
| AACGGGGCGAAGCAAACCGG+AGG | 0.710297 | 5_3:+12872241 | None:intergenic |
| TTGGCTGAAACGGAAAACCA+TGG | 0.713308 | 5_3:-12866535 | Msa0799590:intron |
| GAGTGATCGGAGTAACACGG+TGG | 0.750661 | 5_3:+12872487 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGAATTAAATAATTTACT+CGG | - | chr5_3:12865690-12865709 | Msa0799590:intron | 10.0% |
| !!! | GATTATTATTTTTATATGAT+CGG | - | chr5_3:12866962-12866981 | Msa0799590:intron | 10.0% |
| !!! | ATTATTATTTTTATATGATC+GGG | - | chr5_3:12866963-12866982 | Msa0799590:intron | 10.0% |
| !!! | GTTTTAGTTTTTTTTAAATA+AGG | - | chr5_3:12869298-12869317 | Msa0799590:intron | 10.0% |
| !!! | TTTGTTTCTTTTAATATTTT+TGG | - | chr5_3:12871020-12871039 | Msa0799590:CDS | 10.0% |
| !!! | GGATATTTTTAAAATATATT+TGG | - | chr5_3:12872011-12872030 | Msa0799590:intron | 10.0% |
| !!! | CTAATAATTTTAGTATCTTT+TGG | + | chr5_3:12866163-12866182 | None:intergenic | 15.0% |
| !! | AAAAAAACACAAAATATACT+CGG | - | chr5_3:12866838-12866857 | Msa0799590:intron | 15.0% |
| !! | TGATTATATGTTATAAGATT+TGG | - | chr5_3:12867155-12867174 | Msa0799590:intron | 15.0% |
| !!! | TTCTATTTTAATCTGTTTTT+AGG | - | chr5_3:12868359-12868378 | Msa0799590:intron | 15.0% |
| !!! | TTACTTTTATTATCTAGAAA+AGG | + | chr5_3:12868443-12868462 | None:intergenic | 15.0% |
| !! | CAATATCAAAAACTAATATA+AGG | + | chr5_3:12869151-12869170 | None:intergenic | 15.0% |
| !!! | AAAACAAATAACTTTTCATA+TGG | - | chr5_3:12869802-12869821 | Msa0799590:intron | 15.0% |
| !! | AATAAATAAGAAATTACGAA+TGG | + | chr5_3:12870729-12870748 | None:intergenic | 15.0% |
| !! | AATATTAAAAGAAACAAAGT+AGG | + | chr5_3:12871018-12871037 | None:intergenic | 15.0% |
| !! | AATTGGAATTTATAGTTTAA+TGG | - | chr5_3:12872094-12872113 | Msa0799590:intron | 15.0% |
| !!! | AATTTATAGTTTAATGGATA+TGG | - | chr5_3:12872100-12872119 | Msa0799590:intron | 15.0% |
| !!! | GTAAAAAGTTTTAAACAGTT+AGG | - | chr5_3:12865543-12865562 | Msa0799590:intron | 20.0% |
| !!! | TAAGTATGCTTTTTAAATCA+TGG | - | chr5_3:12865724-12865743 | Msa0799590:intron | 20.0% |
| !! | TAGAAGAACAAGAATAAAAA+AGG | + | chr5_3:12865992-12866011 | None:intergenic | 20.0% |
| !!! | GTATTTTTGTGTATAAAGTT+TGG | - | chr5_3:12866315-12866334 | Msa0799590:intron | 20.0% |
| !!! | AACCAATTTTTTATATGTTG+AGG | - | chr5_3:12866986-12867005 | Msa0799590:intron | 20.0% |
| !! | AACCTCAACATATAAAAAAT+TGG | + | chr5_3:12866991-12867010 | None:intergenic | 20.0% |
| !! | AATTTAGAAGTAGAAGATAT+GGG | + | chr5_3:12867228-12867247 | None:intergenic | 20.0% |
| !! | AAATTTAGAAGTAGAAGATA+TGG | + | chr5_3:12867229-12867248 | None:intergenic | 20.0% |
| !! | ATAATTAAATTTCACTTTGC+AGG | - | chr5_3:12867250-12867269 | Msa0799590:intron | 20.0% |
| !! | TCAAAACACAAAATATGTTA+TGG | + | chr5_3:12867457-12867476 | None:intergenic | 20.0% |
| !!! | TGTTGTTTAATGATATTATC+AGG | - | chr5_3:12867759-12867778 | Msa0799590:intron | 20.0% |
| !! | TAAGCATATGAATAATGATT+TGG | + | chr5_3:12867789-12867808 | None:intergenic | 20.0% |
| !! | CTTATATTTCTTAGAGATTT+AGG | - | chr5_3:12867805-12867824 | Msa0799590:intron | 20.0% |
| !!! | TACGTCCTATATTTTATTAT+CGG | - | chr5_3:12868287-12868306 | Msa0799590:intron | 20.0% |
| !!! | GTCAACTTTTTCTTATAATA+AGG | + | chr5_3:12868713-12868732 | None:intergenic | 20.0% |
| !!! | TAAGAAAAAGTTGACTTTTT+AGG | - | chr5_3:12868718-12868737 | Msa0799590:intron | 20.0% |
| !!! | TAAGAAACAATTGACTTTTT+TGG | + | chr5_3:12868807-12868826 | None:intergenic | 20.0% |
| !!! | GTCAATTGTTTCTTATAATA+AGG | - | chr5_3:12868812-12868831 | Msa0799590:intron | 20.0% |
| !! | ATTATCGAAATGACATTTAT+TGG | + | chr5_3:12869035-12869054 | None:intergenic | 20.0% |
| !! | CATTTCGATAATCATTATTT+AGG | - | chr5_3:12869043-12869062 | Msa0799590:intron | 20.0% |
| !! | ATCAAAAACTAATATAAGGA+AGG | + | chr5_3:12869147-12869166 | None:intergenic | 20.0% |
| !!! | ATTAGTTTTTGATATTGTGT+TGG | - | chr5_3:12869154-12869173 | Msa0799590:intron | 20.0% |
| !!! | TTTTTAAATAAGGTGATTCA+TGG | - | chr5_3:12869308-12869327 | Msa0799590:intron | 20.0% |
| !! | TCTTAACAATTCAATTAGTT+TGG | - | chr5_3:12869387-12869406 | Msa0799590:intron | 20.0% |
| !!! | TTTCTTTCTTGTCTTTTATT+TGG | - | chr5_3:12869451-12869470 | Msa0799590:intron | 20.0% |
| !! | CAAAAATAAGTGGTATAAAA+AGG | + | chr5_3:12869641-12869660 | None:intergenic | 20.0% |
| !!! | TTTTATGTATGTACTGTAAT+TGG | - | chr5_3:12869709-12869728 | Msa0799590:intron | 20.0% |
| !! | TTTATGTATGTACTGTAATT+GGG | - | chr5_3:12869710-12869729 | Msa0799590:intron | 20.0% |
| !!! | ACAGGTTTAATTTTATCTTT+TGG | - | chr5_3:12870132-12870151 | Msa0799590:CDS | 20.0% |
| !!! | TTTTTTTGAAGAAGCTAAAA+TGG | - | chr5_3:12870229-12870248 | Msa0799590:CDS | 20.0% |
| !! | TTCATAGTTCATATACTTTA+CGG | + | chr5_3:12870606-12870625 | None:intergenic | 20.0% |
| !!! | TATGAAAAATCAATGTGTTT+TGG | - | chr5_3:12870620-12870639 | Msa0799590:CDS | 20.0% |
| !!! | ATGAAAAATCAATGTGTTTT+GGG | - | chr5_3:12870621-12870640 | Msa0799590:CDS | 20.0% |
| !! | AAAGTAAAGTAAACTTAGAT+AGG | + | chr5_3:12870755-12870774 | None:intergenic | 20.0% |
| !!! | ATATTTTTAATCTGAGTTTC+AGG | - | chr5_3:12870901-12870920 | Msa0799590:CDS | 20.0% |
| !! | GATTTATAAATGCTTATTCA+AGG | - | chr5_3:12871424-12871443 | Msa0799590:intron | 20.0% |
| !! | TTCAGTCCAAAATAAAAAAA+TGG | - | chr5_3:12871569-12871588 | Msa0799590:intron | 20.0% |
| !! | TCCAAAATAAAAAAATGGAA+TGG | - | chr5_3:12871574-12871593 | Msa0799590:intron | 20.0% |
| !! | CAAAAAAAAAAACAATTGTG+TGG | + | chr5_3:12871992-12872011 | None:intergenic | 20.0% |
| !!! | CACACAATTGTTTTTTTTTT+TGG | - | chr5_3:12871990-12872009 | Msa0799590:intron | 20.0% |
| !!! | TTTCTTCTTGTTTGAATATA+AGG | - | chr5_3:12872293-12872312 | Msa0799590:CDS | 20.0% |
| ! | ATAGAAACGTACATAAAAAC+GGG | + | chr5_3:12865298-12865317 | None:intergenic | 25.0% |
| ! | GATAGAAACGTACATAAAAA+CGG | + | chr5_3:12865299-12865318 | None:intergenic | 25.0% |
| ! | ATCAAAGTACATCACTAAAA+TGG | + | chr5_3:12865350-12865369 | None:intergenic | 25.0% |
| !!! | AAGTTTTAAACAGTTAGGAA+AGG | - | chr5_3:12865548-12865567 | Msa0799590:intron | 25.0% |
| !!! | TAGTTTTCAATTTGTTTGTG+AGG | - | chr5_3:12866180-12866199 | Msa0799590:intron | 25.0% |
| ! | TAACAGTAATAAACATAGCT+TGG | + | chr5_3:12866224-12866243 | None:intergenic | 25.0% |
| ! | TTCTTTACTTACTATTGCAT+TGG | - | chr5_3:12866285-12866304 | Msa0799590:CDS | 25.0% |
| !! | ATGATGATGATAATGCTAAA+AGG | - | chr5_3:12866463-12866482 | Msa0799590:intron | 25.0% |
| ! | TATAATCATGTAGAAGAATC+AGG | + | chr5_3:12867143-12867162 | None:intergenic | 25.0% |
| ! | ATTTAGAAGTAGAAGATATG+GGG | + | chr5_3:12867227-12867246 | None:intergenic | 25.0% |
| ! | TCTAAAAATCCAATCAAACA+TGG | + | chr5_3:12867704-12867723 | None:intergenic | 25.0% |
| ! | TTTATAGCTCATTAACAATC+TGG | - | chr5_3:12868243-12868262 | Msa0799590:intron | 25.0% |
| ! | AAAATATAGGACGTACTAAT+GGG | + | chr5_3:12868282-12868301 | None:intergenic | 25.0% |
| ! | TAAAATATAGGACGTACTAA+TGG | + | chr5_3:12868283-12868302 | None:intergenic | 25.0% |
| !! | ACGTCCTATATTTTATTATC+GGG | - | chr5_3:12868288-12868307 | Msa0799590:intron | 25.0% |
| ! | CATCATTAGCACTAAAAAAA+GGG | + | chr5_3:12868418-12868437 | None:intergenic | 25.0% |
| ! | ACATCATTAGCACTAAAAAA+AGG | + | chr5_3:12868419-12868438 | None:intergenic | 25.0% |
| !!! | TTTGTCGTATTCTTACTTTT+TGG | - | chr5_3:12868600-12868619 | Msa0799590:intron | 25.0% |
| !! | CTTTTTCTTATAATAAGGAC+CGG | + | chr5_3:12868708-12868727 | None:intergenic | 25.0% |
| !! | TTGTTTCTTATAATAAGGAC+CGG | - | chr5_3:12868817-12868836 | Msa0799590:intron | 25.0% |
| ! | AGACAAAATATATTCACTCA+TGG | + | chr5_3:12869335-12869354 | None:intergenic | 25.0% |
| ! | TACAAATGTAAAGAAACTGT+GGG | + | chr5_3:12869742-12869761 | None:intergenic | 25.0% |
| ! | TTACAAATGTAAAGAAACTG+TGG | + | chr5_3:12869743-12869762 | None:intergenic | 25.0% |
| !!! | GAAAAGTTATTTGTTTTGCT+AGG | + | chr5_3:12869799-12869818 | None:intergenic | 25.0% |
| !! | CAATATTTCTATGATGCATT+AGG | - | chr5_3:12869978-12869997 | Msa0799590:CDS | 25.0% |
| !! | TATAGAATTTTTGCAAAGCA+TGG | - | chr5_3:12870165-12870184 | Msa0799590:CDS | 25.0% |
| ! | TCATAGTTCATATACTTTAC+GGG | + | chr5_3:12870605-12870624 | None:intergenic | 25.0% |
| !! | TGAAAAATCAATGTGTTTTG+GGG | - | chr5_3:12870622-12870641 | Msa0799590:CDS | 25.0% |
| ! | TAGAAAGGTAGAAATGAATT+CGG | - | chr5_3:12871294-12871313 | Msa0799590:intron | 25.0% |
| !!! | GCCATTCCATTTTTTTATTT+TGG | + | chr5_3:12871578-12871597 | None:intergenic | 25.0% |
| !! | AAGCATTAAGTTGTAAGTTA+AGG | - | chr5_3:12871656-12871675 | Msa0799590:intron | 25.0% |
| !! | AGCATTAAGTTGTAAGTTAA+GGG | - | chr5_3:12871657-12871676 | Msa0799590:intron | 25.0% |
| ! | ATAAATCCAAAATCATGACA+AGG | + | chr5_3:12871769-12871788 | None:intergenic | 25.0% |
| ! | TATTCAAACAAGAAGAAAGT+GGG | + | chr5_3:12872291-12872310 | None:intergenic | 25.0% |
| ! | ATATTCAAACAAGAAGAAAG+TGG | + | chr5_3:12872292-12872311 | None:intergenic | 25.0% |
| !!! | ATAAGCAAAGTTGACTTTTT+AGG | - | chr5_3:12872522-12872541 | Msa0799590:five_prime_UTR | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr5_3:12872547-12872566 | Msa0799590:five_prime_UTR | 25.0% |
| CGTCAAAGTTTGTATAAAAG+CGG | + | chr5_3:12864984-12865003 | None:intergenic | 30.0% | |
| TAGAAACGTACATAAAAACG+GGG | + | chr5_3:12865297-12865316 | None:intergenic | 30.0% | |
| ! | ATGCTTTTAGTGATGTGATA+AGG | - | chr5_3:12865624-12865643 | Msa0799590:intron | 30.0% |
| ATGTGATAAGGATGATTGAT+AGG | - | chr5_3:12865636-12865655 | Msa0799590:intron | 30.0% | |
| GGAAAAAAATAAGAACAGTG+TGG | + | chr5_3:12866262-12866281 | None:intergenic | 30.0% | |
| GCAATAGTAAGTAAAGAAGA+CGG | + | chr5_3:12866283-12866302 | None:intergenic | 30.0% | |
| AAAAAAATTCAGAGTCTTCG+AGG | - | chr5_3:12866541-12866560 | Msa0799590:CDS | 30.0% | |
| AAAATATACTCGGAGAAGAA+AGG | - | chr5_3:12866848-12866867 | Msa0799590:intron | 30.0% | |
| AAATATACTCGGAGAAGAAA+GGG | - | chr5_3:12866849-12866868 | Msa0799590:intron | 30.0% | |
| TTTAGAAGTAGAAGATATGG+GGG | + | chr5_3:12867226-12867245 | None:intergenic | 30.0% | |
| ATTAAATTTCACTTTGCAGG+AGG | - | chr5_3:12867253-12867272 | Msa0799590:intron | 30.0% | |
| GAATTGAACAAGTTTCTTTG+TGG | - | chr5_3:12867480-12867499 | Msa0799590:CDS | 30.0% | |
| !! | TTCACTTTTAAGCACAAAAC+AGG | - | chr5_3:12867514-12867533 | Msa0799590:CDS | 30.0% |
| TAGATATGTCCATGTTTGAT+TGG | - | chr5_3:12867692-12867711 | Msa0799590:intron | 30.0% | |
| ! | GCATATGAATAATGATTTGG+TGG | + | chr5_3:12867786-12867805 | None:intergenic | 30.0% |
| !! | TATTTTCAATCTGGGGTTTT+GGG | - | chr5_3:12867835-12867854 | Msa0799590:intron | 30.0% |
| AACTACTAGTCAAACTGTAA+AGG | - | chr5_3:12867974-12867993 | Msa0799590:intron | 30.0% | |
| ACTACTAGTCAAACTGTAAA+GGG | - | chr5_3:12867975-12867994 | Msa0799590:intron | 30.0% | |
| GTTCAATTCATATACACTGT+CGG | - | chr5_3:12868059-12868078 | Msa0799590:intron | 30.0% | |
| TCATACCTCATTAATTGATG+TGG | - | chr5_3:12868155-12868174 | Msa0799590:intron | 30.0% | |
| TGCTCCCGATAATAAAATAT+AGG | + | chr5_3:12868295-12868314 | None:intergenic | 30.0% | |
| ! | ATATTTTATTATCGGGAGCA+CGG | - | chr5_3:12868295-12868314 | Msa0799590:intron | 30.0% |
| AGGACATATTTATGATCTGT+AGG | - | chr5_3:12868379-12868398 | Msa0799590:intron | 30.0% | |
| GAATTTGAATTCAGAGCTAT+AGG | - | chr5_3:12868542-12868561 | Msa0799590:CDS | 30.0% | |
| GAAGTAATAAGAGTCTGATA+TGG | + | chr5_3:12868886-12868905 | None:intergenic | 30.0% | |
| ! | TTGAGGAAGATGATTTTGTA+AGG | - | chr5_3:12868952-12868971 | Msa0799590:intron | 30.0% |
| GAAATGACATTTATTGGAGA+TGG | + | chr5_3:12869029-12869048 | None:intergenic | 30.0% | |
| GGATTATCAAAGTCAATTGA+AGG | + | chr5_3:12869126-12869145 | None:intergenic | 30.0% | |
| ! | ACAATTCAATTAGTTTGGTC+TGG | - | chr5_3:12869392-12869411 | Msa0799590:intron | 30.0% |
| TGGTCTGGGAAATATTTAAA+AGG | - | chr5_3:12869412-12869431 | Msa0799590:intron | 30.0% | |
| !!! | TATACCACTTATTTTTGTGC+AGG | - | chr5_3:12869644-12869663 | Msa0799590:intron | 30.0% |
| AAAACCTGCACAAAAATAAG+TGG | + | chr5_3:12869651-12869670 | None:intergenic | 30.0% | |
| GTTAATACCCTAATGATTCA+TGG | - | chr5_3:12869772-12869791 | Msa0799590:intron | 30.0% | |
| ! | TATTGCATACGTGTTTTCTT+CGG | + | chr5_3:12870354-12870373 | None:intergenic | 30.0% |
| TATGTAGGTCGTATACTATA+AGG | + | chr5_3:12870390-12870409 | None:intergenic | 30.0% | |
| CATAGTTCATATACTTTACG+GGG | + | chr5_3:12870604-12870623 | None:intergenic | 30.0% | |
| ! | CATGTCGTTTGTCTAAAAAA+GGG | + | chr5_3:12870676-12870695 | None:intergenic | 30.0% |
| ACAAACGACATGGTAAAAAA+AGG | - | chr5_3:12870684-12870703 | Msa0799590:CDS | 30.0% | |
| !! | TTTACTTTTCAGATCAGACA+AGG | - | chr5_3:12870767-12870786 | Msa0799590:CDS | 30.0% |
| ! | TTGCATATTCCATCGTTTTA+AGG | + | chr5_3:12870882-12870901 | None:intergenic | 30.0% |
| ! | GATTGTTTTCCTTTCTTTAC+TGG | - | chr5_3:12871057-12871076 | Msa0799590:intron | 30.0% |
| TAATAGTTCATGTCTATGTG+AGG | - | chr5_3:12871139-12871158 | Msa0799590:intron | 30.0% | |
| AAAATGCTCCTTCTGTTTAT+TGG | - | chr5_3:12871198-12871217 | Msa0799590:intron | 30.0% | |
| ATATCCTTGTATTCTGTAGA+TGG | - | chr5_3:12871392-12871411 | Msa0799590:intron | 30.0% | |
| ! | GCATTAAGTTGTAAGTTAAG+GGG | - | chr5_3:12871658-12871677 | Msa0799590:intron | 30.0% |
| TCAATGCACATATGAAATAC+TGG | + | chr5_3:12871706-12871725 | None:intergenic | 30.0% | |
| ! | AAACTTACATTTTGGATTCC+AGG | + | chr5_3:12871955-12871974 | None:intergenic | 30.0% |
| ! | GGATGGAAAAACTTACATTT+TGG | + | chr5_3:12871963-12871982 | None:intergenic | 30.0% |
| AGGAAGAATGCTGTTATAAA+CGG | + | chr5_3:12872247-12872266 | None:intergenic | 30.0% | |
| ACTTTGCTTATAATAGTGAC+CGG | + | chr5_3:12872513-12872532 | None:intergenic | 30.0% | |
| !! | TTGATATTGATTCTGCAGCA+TGG | - | chr5_3:12865423-12865442 | Msa0799590:intron | 35.0% |
| ATGATACGTAGAATGCATAC+CGG | + | chr5_3:12865500-12865519 | None:intergenic | 35.0% | |
| TATGCATTCTACGTATCATG+TGG | - | chr5_3:12865501-12865520 | Msa0799590:intron | 35.0% | |
| TTAGGAAAGGAAATCACAGT+CGG | - | chr5_3:12865561-12865580 | Msa0799590:intron | 35.0% | |
| ATCCTTTGTTCGTATAGTGA+GGG | - | chr5_3:12865781-12865800 | Msa0799590:intron | 35.0% | |
| !! | TTCGATCAAAAGTGCTACAT+AGG | + | chr5_3:12865822-12865841 | None:intergenic | 35.0% |
| ! | TATGTAGCACTTTTGATCGA+AGG | - | chr5_3:12865821-12865840 | Msa0799590:intron | 35.0% |
| CAGTAATAAACATAGCTTGG+TGG | + | chr5_3:12866221-12866240 | None:intergenic | 35.0% | |
| ! | ACTTACTATTGCATTGGTGT+CGG | - | chr5_3:12866291-12866310 | Msa0799590:CDS | 35.0% |
| CTCAGAATTTGGTTGAACAT+CGG | + | chr5_3:12866625-12866644 | None:intergenic | 35.0% | |
| ! | TGTTCAACCAAATTCTGAGA+AGG | - | chr5_3:12866626-12866645 | Msa0799590:intron | 35.0% |
| ATGTCTACCTTCTCAGAATT+TGG | + | chr5_3:12866636-12866655 | None:intergenic | 35.0% | |
| TCTAACAGTAAGACTGATGA+AGG | - | chr5_3:12866726-12866745 | Msa0799590:CDS | 35.0% | |
| AGCATCATTAACTCTTCAAC+TGG | + | chr5_3:12866753-12866772 | None:intergenic | 35.0% | |
| CGATATCAAGTGGACAAAAA+TGG | - | chr5_3:12866920-12866939 | Msa0799590:intron | 35.0% | |
| !! | GATAGTTTCTAGTTCTGCAA+TGG | - | chr5_3:12867286-12867305 | Msa0799590:intron | 35.0% |
| GAAGCTCAATCAAATGAAAG+CGG | - | chr5_3:12867338-12867357 | Msa0799590:intron | 35.0% | |
| CATATCTATACCTCCAAATG+AGG | + | chr5_3:12867680-12867699 | None:intergenic | 35.0% | |
| !! | CTATTTTCAATCTGGGGTTT+TGG | - | chr5_3:12867834-12867853 | Msa0799590:intron | 35.0% |
| CACAAAAAACCATCACATTG+AGG | + | chr5_3:12867866-12867885 | None:intergenic | 35.0% | |
| !!! | GGTTTTTTGTGCTACATTAC+TGG | - | chr5_3:12867875-12867894 | Msa0799590:intron | 35.0% |
| ! | GTTTGAATTGCCTTTTCACA+AGG | - | chr5_3:12868002-12868021 | Msa0799590:intron | 35.0% |
| ! | AGTTTTACACATGCATCCAA+TGG | - | chr5_3:12868090-12868109 | Msa0799590:intron | 35.0% |
| ATGATGTGTCAATACACCAT+TGG | + | chr5_3:12868109-12868128 | None:intergenic | 35.0% | |
| TGTTGCCACATCAATTAATG+AGG | + | chr5_3:12868163-12868182 | None:intergenic | 35.0% | |
| ATAGCTCATTAACAATCTGG+TGG | - | chr5_3:12868246-12868265 | Msa0799590:intron | 35.0% | |
| !! | TATTTTATTATCGGGAGCAC+GGG | - | chr5_3:12868296-12868315 | Msa0799590:intron | 35.0% |
| ATCAATAAATGCTTACGCCT+TGG | + | chr5_3:12868580-12868599 | None:intergenic | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | + | chr5_3:12868821-12868840 | None:intergenic | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | + | chr5_3:12868820-12868839 | None:intergenic | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | - | chr5_3:12868820-12868839 | Msa0799590:intron | 35.0% | |
| TTGCTATACAATACTTCCTC+CGG | + | chr5_3:12868839-12868858 | None:intergenic | 35.0% | |
| ATCTTCCTCAAAGACAAATC+CGG | + | chr5_3:12868943-12868962 | None:intergenic | 35.0% | |
| ! | AAGATGATTTTGTAAGGCCA+TGG | - | chr5_3:12868958-12868977 | Msa0799590:CDS | 35.0% |
| ! | AGATGATTTTGTAAGGCCAT+GGG | - | chr5_3:12868959-12868978 | Msa0799590:CDS | 35.0% |
| CATTTATTGGAGATGGAAAG+TGG | + | chr5_3:12869022-12869041 | None:intergenic | 35.0% | |
| TGCAATACTGAGAATAGACT+AGG | + | chr5_3:12869180-12869199 | None:intergenic | 35.0% | |
| !!! | TATTTTTTCACCTTTTGCCC+TGG | - | chr5_3:12869527-12869546 | Msa0799590:intron | 35.0% |
| GCTAACAGCAATTAGATTCT+TGG | + | chr5_3:12869864-12869883 | None:intergenic | 35.0% | |
| !! | GGAGTTTCTATCGTTTTTGA+TGG | - | chr5_3:12870186-12870205 | Msa0799590:CDS | 35.0% |
| !!! | TTTCTTCGGTTTTGTTTAGC+CGG | + | chr5_3:12870340-12870359 | None:intergenic | 35.0% |
| AGATACAGGTTCCACTTAAA+GGG | + | chr5_3:12870523-12870542 | None:intergenic | 35.0% | |
| AAACTAATCCTTCGAGATAC+AGG | + | chr5_3:12870537-12870556 | None:intergenic | 35.0% | |
| !! | TATCTCGAAGGATTAGTTTC+TGG | - | chr5_3:12870538-12870557 | Msa0799590:intron | 35.0% |
| !!! | TTTACGGGGTTCCTTTTTTT+TGG | + | chr5_3:12870590-12870609 | None:intergenic | 35.0% |
| !!! | AAAATCAATGTGTTTTGGGG+TGG | - | chr5_3:12870625-12870644 | Msa0799590:CDS | 35.0% |
| ! | CCATGTCGTTTGTCTAAAAA+AGG | + | chr5_3:12870677-12870696 | None:intergenic | 35.0% |
| !!! | CCTTTTTTAGACAAACGACA+TGG | - | chr5_3:12870674-12870693 | Msa0799590:CDS | 35.0% |
| ACACTTATAGGTTACTCACT+TGG | - | chr5_3:12870930-12870949 | Msa0799590:CDS | 35.0% | |
| ! | TTTCAAGTGTCTAGAGTGTT+TGG | - | chr5_3:12870965-12870984 | Msa0799590:CDS | 35.0% |
| TTCCTTTCTTTACTGGTCAA+AGG | - | chr5_3:12871064-12871083 | Msa0799590:intron | 35.0% | |
| ATCCTTTGACCAGTAAAGAA+AGG | + | chr5_3:12871069-12871088 | None:intergenic | 35.0% | |
| !!! | GAGGTGCTTCTTCTTTTTTT+TGG | - | chr5_3:12871158-12871177 | Msa0799590:intron | 35.0% |
| TTCACATCCTTGATTGCAAT+GGG | + | chr5_3:12871262-12871281 | None:intergenic | 35.0% | |
| ATTCACATCCTTGATTGCAA+TGG | + | chr5_3:12871263-12871282 | None:intergenic | 35.0% | |
| TTGCAATCAAGGATGTGAAT+TGG | - | chr5_3:12871263-12871282 | Msa0799590:intron | 35.0% | |
| TGCAATCAAGGATGTGAATT+GGG | - | chr5_3:12871264-12871283 | Msa0799590:intron | 35.0% | |
| TAGTACATTCTCATTCTCAC+AGG | - | chr5_3:12871333-12871352 | Msa0799590:intron | 35.0% | |
| GAATTATCCCTATGTACTGT+GGG | + | chr5_3:12871540-12871559 | None:intergenic | 35.0% | |
| AGAATTATCCCTATGTACTG+TGG | + | chr5_3:12871541-12871560 | None:intergenic | 35.0% | |
| ATGGCTTGAAGTTGTATTTG+TGG | - | chr5_3:12871593-12871612 | Msa0799590:intron | 35.0% | |
| TTGACTTCCATATGTTGATC+TGG | - | chr5_3:12871735-12871754 | Msa0799590:intron | 35.0% | |
| TATGGATCCAGATCAACATA+TGG | + | chr5_3:12871745-12871764 | None:intergenic | 35.0% | |
| CCAAAATCATGACAAGGTTA+TGG | + | chr5_3:12871763-12871782 | None:intergenic | 35.0% | |
| ! | CCATAACCTTGTCATGATTT+TGG | - | chr5_3:12871760-12871779 | Msa0799590:intron | 35.0% |
| AACCTATCTCTCTATGGATT+AGG | + | chr5_3:12871845-12871864 | None:intergenic | 35.0% | |
| TTACTTTCTCAAGGTTTAGC+TGG | - | chr5_3:12871910-12871929 | Msa0799590:intron | 35.0% | |
| AAAACAATTGTGTGGTGAAG+AGG | + | chr5_3:12871984-12872003 | None:intergenic | 35.0% | |
| GGAAGAATGCTGTTATAAAC+GGG | + | chr5_3:12872246-12872265 | None:intergenic | 35.0% | |
| TTGGAAGTGGTTTACTCTTT+AGG | + | chr5_3:12872267-12872286 | None:intergenic | 35.0% | |
| AAACAAGAAGAAAGTGGGAT+TGG | + | chr5_3:12872286-12872305 | None:intergenic | 35.0% | |
| ! | AAGGAAAATCGTCGGTTGAA+AGG | + | chr5_3:12865195-12865214 | None:intergenic | 40.0% |
| CTCACTATACGAACAAAGGA+TGG | + | chr5_3:12865782-12865801 | None:intergenic | 40.0% | |
| CATCCTTTGTTCGTATAGTG+AGG | - | chr5_3:12865780-12865799 | Msa0799590:intron | 40.0% | |
| TCCTTTGTTCGTATAGTGAG+GGG | - | chr5_3:12865782-12865801 | Msa0799590:intron | 40.0% | |
| TACTAACACGTGTCAGACAT+CGG | + | chr5_3:12865852-12865871 | None:intergenic | 40.0% | |
| ACGAAACTAACACTTCGACA+TGG | + | chr5_3:12865952-12865971 | None:intergenic | 40.0% | |
| TTTGCCTCTTAGCACGTATT+AGG | - | chr5_3:12866031-12866050 | Msa0799590:intron | 40.0% | |
| TGCTCAGCAAAAGAGTTCAA+AGG | + | chr5_3:12866058-12866077 | None:intergenic | 40.0% | |
| ! | AACTCTTTTGCTGAGCAAGA+TGG | - | chr5_3:12866061-12866080 | Msa0799590:CDS | 40.0% |
| !! | GTATAAAGTTTGGTGCTGTG+TGG | - | chr5_3:12866325-12866344 | Msa0799590:intron | 40.0% |
| ! | AGATCAAGAGCTTGCTTTGT+CGG | - | chr5_3:12866488-12866507 | Msa0799590:intron | 40.0% |
| TGAGAAGGTAGACATGCATT+TGG | - | chr5_3:12866641-12866660 | Msa0799590:intron | 40.0% | |
| TGTTAGAAGATCCCTCATGT+GGG | + | chr5_3:12866713-12866732 | None:intergenic | 40.0% | |
| TAATGATGCTCAGCTATCAG+AGG | - | chr5_3:12866763-12866782 | Msa0799590:intron | 40.0% | |
| GTAAAGAATCATCCTCACTC+TGG | - | chr5_3:12867069-12867088 | Msa0799590:intron | 40.0% | |
| TCAATCAAATGAAAGCGGCT+GGG | - | chr5_3:12867343-12867362 | Msa0799590:intron | 40.0% | |
| ! | GGGATCAAAGTACCTAAAGT+TGG | + | chr5_3:12867583-12867602 | None:intergenic | 40.0% |
| GGTACTTTGATCCCTGTTAT+TGG | - | chr5_3:12867589-12867608 | Msa0799590:intron | 40.0% | |
| AGAAATCACAGAGAGCTACT+TGG | + | chr5_3:12867738-12867757 | None:intergenic | 40.0% | |
| ! | GCCAGCACTATTTTCAATCT+GGG | - | chr5_3:12867827-12867846 | Msa0799590:intron | 40.0% |
| ! | CCAGCACTATTTTCAATCTG+GGG | - | chr5_3:12867828-12867847 | Msa0799590:intron | 40.0% |
| TTGAAGAAATTACTGCACGC+AGG | + | chr5_3:12867939-12867958 | None:intergenic | 40.0% | |
| TGTGGCAACACATCAATCAA+TGG | - | chr5_3:12868173-12868192 | Msa0799590:intron | 40.0% | |
| ACCAAAATGGCTAGAAGAGT+TGG | - | chr5_3:12868509-12868528 | Msa0799590:intron | 40.0% | |
| CCAAAATGGCTAGAAGAGTT+GGG | - | chr5_3:12868510-12868529 | Msa0799590:intron | 40.0% | |
| AAATGCTTACGCCTTGGTTA+CGG | + | chr5_3:12868574-12868593 | None:intergenic | 40.0% | |
| TTATGATCCATGTGCATGCA+AGG | - | chr5_3:12868645-12868664 | Msa0799590:intron | 40.0% | |
| ! | TTTTAACCTTGTACTCCCTC+CGG | - | chr5_3:12868686-12868705 | Msa0799590:intron | 40.0% |
| TTACTTCTGCTTGCAGAGAT+TGG | - | chr5_3:12868899-12868918 | Msa0799590:intron | 40.0% | |
| GGAAGGACAGAATGACAATT+TGG | - | chr5_3:12868980-12868999 | Msa0799590:CDS | 40.0% | |
| GACAGAATGACAATTTGGAG+AGG | - | chr5_3:12868985-12869004 | Msa0799590:CDS | 40.0% | |
| GCATTATACCTAGCTGATGT+GGG | + | chr5_3:12869094-12869113 | None:intergenic | 40.0% | |
| TGCATTATACCTAGCTGATG+TGG | + | chr5_3:12869095-12869114 | None:intergenic | 40.0% | |
| TGTTGAGATTTCCGCAAAAC+TGG | - | chr5_3:12869203-12869222 | Msa0799590:intron | 40.0% | |
| ATTTCCGCAAAACTGGCAAA+AGG | - | chr5_3:12869210-12869229 | Msa0799590:intron | 40.0% | |
| TTTCCGCAAAACTGGCAAAA+GGG | - | chr5_3:12869211-12869230 | Msa0799590:intron | 40.0% | |
| GAAAGATGTCTTGCCTATAG+TGG | - | chr5_3:12869264-12869283 | Msa0799590:intron | 40.0% | |
| ! | TCAATTAGTTTGGTCTGGTC+TGG | - | chr5_3:12869397-12869416 | Msa0799590:intron | 40.0% |
| ! | CAATTAGTTTGGTCTGGTCT+GGG | - | chr5_3:12869398-12869417 | Msa0799590:intron | 40.0% |
| CAAATTCCTTTCACAGACCA+GGG | + | chr5_3:12869547-12869566 | None:intergenic | 40.0% | |
| ACAAATTCCTTTCACAGACC+AGG | + | chr5_3:12869548-12869567 | None:intergenic | 40.0% | |
| GCTAGGACCATGAATCATTA+GGG | + | chr5_3:12869782-12869801 | None:intergenic | 40.0% | |
| TGCTAGGACCATGAATCATT+AGG | + | chr5_3:12869783-12869802 | None:intergenic | 40.0% | |
| ! | ATATGGCCTTGCCAAAAGTT+AGG | - | chr5_3:12869819-12869838 | Msa0799590:intron | 40.0% |
| ! | TGCATACCTAACTTTTGGCA+AGG | + | chr5_3:12869828-12869847 | None:intergenic | 40.0% |
| ! | TGCAGTGCATACCTAACTTT+TGG | + | chr5_3:12869833-12869852 | None:intergenic | 40.0% |
| TGATGCATTAGGAATTGCGA+TGG | - | chr5_3:12869989-12870008 | Msa0799590:intron | 40.0% | |
| !! | GAGTGCACTTTTAACTGCAT+TGG | - | chr5_3:12870046-12870065 | Msa0799590:intron | 40.0% |
| !!! | CACTTTTAACTGCATTGGCT+TGG | - | chr5_3:12870051-12870070 | Msa0799590:intron | 40.0% |
| GCTGTCTATGAAATCAGTAG+CGG | + | chr5_3:12870093-12870112 | None:intergenic | 40.0% | |
| CAAGAATCACATGTCCAAAC+CGG | - | chr5_3:12870318-12870337 | Msa0799590:intron | 40.0% | |
| GGTCGTATACTATAAGGCTT+TGG | + | chr5_3:12870384-12870403 | None:intergenic | 40.0% | |
| GACCTACATACTACATAGCT+TGG | - | chr5_3:12870400-12870419 | Msa0799590:intron | 40.0% | |
| TGCCAAGCTATGTAGTATGT+AGG | + | chr5_3:12870405-12870424 | None:intergenic | 40.0% | |
| !! | CATATGGAAGAGCACTTGTT+GGG | - | chr5_3:12870488-12870507 | Msa0799590:intron | 40.0% |
| GAGATACAGGTTCCACTTAA+AGG | + | chr5_3:12870524-12870543 | None:intergenic | 40.0% | |
| !! | AAGGATTAGTTTCTGGCTTC+CGG | - | chr5_3:12870545-12870564 | Msa0799590:intron | 40.0% |
| !!! | CCTTTTTTTTGGTTGCCCAA+GGG | + | chr5_3:12870579-12870598 | None:intergenic | 40.0% |
| !!! | TCCTTTTTTTTGGTTGCCCA+AGG | + | chr5_3:12870580-12870599 | None:intergenic | 40.0% |
| ! | TTTTCAGATCAGACAAGGCA+GGG | - | chr5_3:12870772-12870791 | Msa0799590:CDS | 40.0% |
| ! | CTGCTTGCTGAAGTGTTATT+GGG | - | chr5_3:12870798-12870817 | Msa0799590:intron | 40.0% |
| AGTTCTGCTCCTTAAAACGA+TGG | - | chr5_3:12870870-12870889 | Msa0799590:CDS | 40.0% | |
| GAGTAACCTATAAGTGTCAC+AGG | + | chr5_3:12870927-12870946 | None:intergenic | 40.0% | |
| ! | TCTAGAGTGTTTGGCTGAAA+CGG | - | chr5_3:12870974-12870993 | Msa0799590:CDS | 40.0% |
| AGAGTCGAAAAGTTGTAAGG+GGG | + | chr5_3:12871101-12871120 | None:intergenic | 40.0% | |
| CAGAGTCGAAAAGTTGTAAG+GGG | + | chr5_3:12871102-12871121 | None:intergenic | 40.0% | |
| CCAGAGTCGAAAAGTTGTAA+GGG | + | chr5_3:12871103-12871122 | None:intergenic | 40.0% | |
| ACCAGAGTCGAAAAGTTGTA+AGG | + | chr5_3:12871104-12871123 | None:intergenic | 40.0% | |
| TTCAGCTGCCAATAAACAGA+AGG | + | chr5_3:12871209-12871228 | None:intergenic | 40.0% | |
| GTAGAAAGAGTTGTCCTTCT+TGG | - | chr5_3:12871232-12871251 | Msa0799590:intron | 40.0% | |
| GCTACCATCTACAGAATACA+AGG | + | chr5_3:12871399-12871418 | None:intergenic | 40.0% | |
| TGTATTCTGTAGATGGTAGC+TGG | - | chr5_3:12871399-12871418 | Msa0799590:intron | 40.0% | |
| ! | ACATTTTCATGTACCTGGCA+CGG | + | chr5_3:12871476-12871495 | None:intergenic | 40.0% |
| ! | CCACTACATTTTCATGTACC+TGG | + | chr5_3:12871481-12871500 | None:intergenic | 40.0% |
| CCAGGTACATGAAAATGTAG+TGG | - | chr5_3:12871478-12871497 | Msa0799590:intron | 40.0% | |
| CTCACGGTCATACACAAAAA+AGG | + | chr5_3:12871811-12871830 | None:intergenic | 40.0% | |
| !!! | CTTTTTTGTGTATGACCGTG+AGG | - | chr5_3:12871809-12871828 | Msa0799590:intron | 40.0% |
| CACCTAATCCATAGAGAGAT+AGG | - | chr5_3:12871840-12871859 | Msa0799590:intron | 40.0% | |
| GTGTTCAACCTATCTCTCTA+TGG | + | chr5_3:12871851-12871870 | None:intergenic | 40.0% | |
| TTGTGCAGCTTACTTTCTCA+AGG | - | chr5_3:12871901-12871920 | Msa0799590:intron | 40.0% | |
| TGGATTCCAGGAATATCGAT+TGG | + | chr5_3:12871943-12871962 | None:intergenic | 40.0% | |
| ! | TATGATTAGTGCTAGTCTGC+TGG | - | chr5_3:12872070-12872089 | Msa0799590:intron | 40.0% |
| ! | GACATTTTGCTAAAACGCAC+TGG | - | chr5_3:12872122-12872141 | Msa0799590:intron | 40.0% |
| ! | CTAAAACGCACTGGATTTTC+AGG | - | chr5_3:12872131-12872150 | Msa0799590:intron | 40.0% |
| GATCTTGGATGAACTTGAAC+TGG | - | chr5_3:12872209-12872228 | Msa0799590:intron | 40.0% | |
| TTCCTAGTATCACTGTCAAG+AGG | - | chr5_3:12872324-12872343 | Msa0799590:CDS | 40.0% | |
| ATCCTCTTGACAGTGATACT+AGG | + | chr5_3:12872329-12872348 | None:intergenic | 40.0% | |
| ! | TGTTTGTTACATACTCCCTC+CGG | - | chr5_3:12872491-12872510 | Msa0799590:five_prime_UTR | 40.0% |
| TGCTTATAATAGTGACCGGA+GGG | + | chr5_3:12872509-12872528 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr5_3:12872510-12872529 | None:intergenic | 40.0% | |
| GGGTTTGATGAAGTTGTGCT+TGG | + | chr5_3:12865162-12865181 | None:intergenic | 45.0% | |
| CTTCATCAAACCCATCCACT+AGG | - | chr5_3:12865169-12865188 | Msa0799590:three_prime_UTR | 45.0% | |
| TTTCCGAAGATCCTGACCTT+TGG | - | chr5_3:12865245-12865264 | Msa0799590:three_prime_UTR | 45.0% | |
| TTCCGAAGATCCTGACCTTT+GGG | - | chr5_3:12865246-12865265 | Msa0799590:three_prime_UTR | 45.0% | |
| AACCCAAAGGTCAGGATCTT+CGG | + | chr5_3:12865251-12865270 | None:intergenic | 45.0% | |
| ! | ATTGATTCTGCAGCATGGTC+TGG | - | chr5_3:12865428-12865447 | Msa0799590:intron | 45.0% |
| TCTGGACTTGAGGAAACTTC+TGG | - | chr5_3:12865446-12865465 | Msa0799590:intron | 45.0% | |
| TCCCCTCACTATACGAACAA+AGG | + | chr5_3:12865786-12865805 | None:intergenic | 45.0% | |
| TACATGTGTACGTGTCGTGT+TGG | + | chr5_3:12865893-12865912 | None:intergenic | 45.0% | |
| AGGTCCTAATACGTGCTAAG+AGG | + | chr5_3:12866038-12866057 | None:intergenic | 45.0% | |
| ! | TCTTTTGCTGAGCAAGATGG+TGG | - | chr5_3:12866064-12866083 | Msa0799590:CDS | 45.0% |
| TTTATCGACACATCGCAGCT+GGG | + | chr5_3:12866132-12866151 | None:intergenic | 45.0% | |
| ! | TTTTATCGACACATCGCAGC+TGG | + | chr5_3:12866133-12866152 | None:intergenic | 45.0% |
| ATGTGAAGAAGACCCACATG+AGG | - | chr5_3:12866698-12866717 | Msa0799590:intron | 45.0% | |
| TGTGAAGAAGACCCACATGA+GGG | - | chr5_3:12866699-12866718 | Msa0799590:intron | 45.0% | |
| CTGTTAGAAGATCCCTCATG+TGG | + | chr5_3:12866714-12866733 | None:intergenic | 45.0% | |
| ACAAACAAGCAGCGAGAAGT+TGG | + | chr5_3:12866806-12866825 | None:intergenic | 45.0% | |
| ACTTCTCGCTGCTTGTTTGT+CGG | - | chr5_3:12866806-12866825 | Msa0799590:intron | 45.0% | |
| GCTGCTTGTTTGTCGGATAT+TGG | - | chr5_3:12866813-12866832 | Msa0799590:intron | 45.0% | |
| ! | CAACTTGGCTCGATATCAAG+TGG | - | chr5_3:12866910-12866929 | Msa0799590:intron | 45.0% |
| AAGCTGTATTCACCAGAGTG+AGG | + | chr5_3:12867084-12867103 | None:intergenic | 45.0% | |
| TAGAAGATATGGGGGCTATG+GGG | + | chr5_3:12867218-12867237 | None:intergenic | 45.0% | |
| GTAGAAGATATGGGGGCTAT+GGG | + | chr5_3:12867219-12867238 | None:intergenic | 45.0% | |
| AGTAGAAGATATGGGGGCTA+TGG | + | chr5_3:12867220-12867239 | None:intergenic | 45.0% | |
| CTCAATCAAATGAAAGCGGC+TGG | - | chr5_3:12867342-12867361 | Msa0799590:intron | 45.0% | |
| ! | GGAGCTTTGATGGCTATTAC+TGG | - | chr5_3:12867413-12867432 | Msa0799590:CDS | 45.0% |
| ! | GCTTTGATGGCTATTACTGG+TGG | - | chr5_3:12867416-12867435 | Msa0799590:CDS | 45.0% |
| TTGATCCCTGTTATTGGAGC+AGG | - | chr5_3:12867595-12867614 | Msa0799590:intron | 45.0% | |
| ATCCACCTGCTCCAATAACA+GGG | + | chr5_3:12867603-12867622 | None:intergenic | 45.0% | |
| AATCCACCTGCTCCAATAAC+AGG | + | chr5_3:12867604-12867623 | None:intergenic | 45.0% | |
| ! | GGCCAGCACTATTTTCAATC+TGG | - | chr5_3:12867826-12867845 | Msa0799590:intron | 45.0% |
| CCCCAGATTGAAAATAGTGC+TGG | + | chr5_3:12867831-12867850 | None:intergenic | 45.0% | |
| !! | TGGGTTGATCCTCAATGTGA+TGG | - | chr5_3:12867854-12867873 | Msa0799590:intron | 45.0% |
| TTCTAACGCGCCTTGTGAAA+AGG | + | chr5_3:12868015-12868034 | None:intergenic | 45.0% | |
| ! | TTTTCACAAGGCGCGTTAGA+AGG | - | chr5_3:12868014-12868033 | Msa0799590:intron | 45.0% |
| TTTCACAAGGCGCGTTAGAA+GGG | - | chr5_3:12868015-12868034 | Msa0799590:intron | 45.0% | |
| AACAATCTGGTGGAAACCAC+AGG | - | chr5_3:12868256-12868275 | Msa0799590:intron | 45.0% | |
| AGGGCTTACTGGAACCAAAA+TGG | - | chr5_3:12868496-12868515 | Msa0799590:intron | 45.0% | |
| ! | CCCAACTCTTCTAGCCATTT+TGG | + | chr5_3:12868513-12868532 | None:intergenic | 45.0% |
| ATAGGTGACAACCGTAACCA+AGG | - | chr5_3:12868560-12868579 | Msa0799590:CDS | 45.0% | |
| TACATGTCCTTGCATGCACA+TGG | + | chr5_3:12868655-12868674 | None:intergenic | 45.0% | |
| GAGATTGGCGGTTGAGATAT+TGG | - | chr5_3:12868914-12868933 | Msa0799590:intron | 45.0% | |
| !! | GCGGTTGAGATATTGGTTTC+CGG | - | chr5_3:12868921-12868940 | Msa0799590:intron | 45.0% |
| GGTTTCCGGATTTGTCTTTG+AGG | - | chr5_3:12868935-12868954 | Msa0799590:intron | 45.0% | |
| ! | GATTTTGTAAGGCCATGGGA+AGG | - | chr5_3:12868963-12868982 | Msa0799590:CDS | 45.0% |
| TTGTCATTCTGTCCTTCCCA+TGG | + | chr5_3:12868978-12868997 | None:intergenic | 45.0% | |
| TTCCGCAAAACTGGCAAAAG+GGG | - | chr5_3:12869212-12869231 | Msa0799590:intron | 45.0% | |
| ! | CTTGCCTATAGTGGAGTACA+AGG | - | chr5_3:12869273-12869292 | Msa0799590:intron | 45.0% |
| AAGTTAGGTATGCACTGCAG+TGG | - | chr5_3:12869834-12869853 | Msa0799590:intron | 45.0% | |
| AGTTAGGTATGCACTGCAGT+GGG | - | chr5_3:12869835-12869854 | Msa0799590:intron | 45.0% | |
| TGCTGTTAGCACTGCAATTC+AGG | - | chr5_3:12869874-12869893 | Msa0799590:CDS | 45.0% | |
| TTAGCACTGCAATTCAGGAC+TGG | - | chr5_3:12869879-12869898 | Msa0799590:CDS | 45.0% | |
| CTGATTTCATAGACAGCACG+TGG | - | chr5_3:12870096-12870115 | Msa0799590:intron | 45.0% | |
| ! | CGTGGTCAATTGCTATTGAC+AGG | - | chr5_3:12870114-12870133 | Msa0799590:CDS | 45.0% |
| ATGCACATCTTGTGCTGGAA+TGG | + | chr5_3:12870273-12870292 | None:intergenic | 45.0% | |
| ATTCCAGCACAAGATGTGCA+TGG | - | chr5_3:12870272-12870291 | Msa0799590:intron | 45.0% | |
| !!! | TCGGTTTTGTTTAGCCGGTT+TGG | + | chr5_3:12870335-12870354 | None:intergenic | 45.0% |
| ACTACATAGCTTGGCACAGT+TGG | - | chr5_3:12870409-12870428 | Msa0799590:intron | 45.0% | |
| TTGGCACAGTTGGCAGATAA+TGG | - | chr5_3:12870419-12870438 | Msa0799590:intron | 45.0% | |
| TGGCACAGTTGGCAGATAAT+GGG | - | chr5_3:12870420-12870439 | Msa0799590:intron | 45.0% | |
| TCCCTTAAGCATGTGAGCAT+GGG | - | chr5_3:12870444-12870463 | Msa0799590:intron | 45.0% | |
| ACCCATGCTCACATGCTTAA+GGG | + | chr5_3:12870448-12870467 | None:intergenic | 45.0% | |
| AACCCATGCTCACATGCTTA+AGG | + | chr5_3:12870449-12870468 | None:intergenic | 45.0% | |
| !! | GCATATGGAAGAGCACTTGT+TGG | - | chr5_3:12870487-12870506 | Msa0799590:intron | 45.0% |
| AAGTGGAACCTGTATCTCGA+AGG | - | chr5_3:12870526-12870545 | Msa0799590:intron | 45.0% | |
| CCCTTGGGCAACCAAAAAAA+AGG | - | chr5_3:12870576-12870595 | Msa0799590:intron | 45.0% | |
| ! | CTTTTCAGATCAGACAAGGC+AGG | - | chr5_3:12870771-12870790 | Msa0799590:CDS | 45.0% |
| ! | GCTGCTTGCTGAAGTGTTAT+TGG | - | chr5_3:12870797-12870816 | Msa0799590:intron | 45.0% |
| ! | CTTGCTGAAGTGTTATTGGG+AGG | - | chr5_3:12870801-12870820 | Msa0799590:intron | 45.0% |
| ! | AGTGTTATTGGGAGGATTGC+AGG | - | chr5_3:12870809-12870828 | Msa0799590:CDS | 45.0% |
| ! | GTGTTATTGGGAGGATTGCA+GGG | - | chr5_3:12870810-12870829 | Msa0799590:CDS | 45.0% |
| TTCAGGCCTGTGACACTTAT+AGG | - | chr5_3:12870918-12870937 | Msa0799590:CDS | 45.0% | |
| TTGGCTGAAACGGAAAACCA+TGG | - | chr5_3:12870984-12871003 | Msa0799590:CDS | 45.0% | |
| CTGAAACGGAAAACCATGGT+AGG | - | chr5_3:12870988-12871007 | Msa0799590:CDS | 45.0% | |
| CAAAGTAGGAACACCTACCA+TGG | + | chr5_3:12871004-12871023 | None:intergenic | 45.0% | |
| GAGTCGAAAAGTTGTAAGGG+GGG | + | chr5_3:12871100-12871119 | None:intergenic | 45.0% | |
| ! | CCCTTACAACTTTTCGACTC+TGG | - | chr5_3:12871100-12871119 | Msa0799590:intron | 45.0% |
| !! | ACTTTTCGACTCTGGTGATG+AGG | - | chr5_3:12871108-12871127 | Msa0799590:intron | 45.0% |
| GAATTGGGAAGCTGCTAGAA+AGG | - | chr5_3:12871279-12871298 | Msa0799590:intron | 45.0% | |
| ATGCTTATTCAAGGACCGAC+TGG | - | chr5_3:12871433-12871452 | Msa0799590:intron | 45.0% | |
| GGGTCAACTGAAAGAATCGA+TGG | + | chr5_3:12871520-12871539 | None:intergenic | 45.0% | |
| TCAGTTGACCCACAGTACAT+AGG | - | chr5_3:12871529-12871548 | Msa0799590:intron | 45.0% | |
| CAGTTGACCCACAGTACATA+GGG | - | chr5_3:12871530-12871549 | Msa0799590:intron | 45.0% | |
| ATCCAGCCAATCGATATTCC+TGG | - | chr5_3:12871934-12871953 | Msa0799590:intron | 45.0% | |
| ! | TTCCAGGAATATCGATTGGC+TGG | + | chr5_3:12871939-12871958 | None:intergenic | 45.0% |
| CAATTGTGTGGTGAAGAGGA+TGG | + | chr5_3:12871980-12871999 | None:intergenic | 45.0% | |
| ! | AGTGCTAGTCTGCTGGAAAT+TGG | - | chr5_3:12872077-12872096 | Msa0799590:intron | 45.0% |
| TGACGTGACAGATCACATTG+AGG | - | chr5_3:12872155-12872174 | Msa0799590:intron | 45.0% | |
| GACGTGACAGATCACATTGA+GGG | - | chr5_3:12872156-12872175 | Msa0799590:intron | 45.0% | |
| ACGTGACAGATCACATTGAG+GGG | - | chr5_3:12872157-12872176 | Msa0799590:intron | 45.0% | |
| !! | AGGGGCACTCTTCATATTTG+TGG | - | chr5_3:12872175-12872194 | Msa0799590:intron | 45.0% |
| ! | GGGGCACTCTTCATATTTGT+GGG | - | chr5_3:12872176-12872195 | Msa0799590:intron | 45.0% |
| GAAGAAAGTGGGATTGGAAG+TGG | + | chr5_3:12872280-12872299 | None:intergenic | 45.0% | |
| GTATCACTGTCAAGAGGATC+TGG | - | chr5_3:12872330-12872349 | Msa0799590:CDS | 45.0% | |
| ATCTGGATTCCCATGCATGA+GGG | - | chr5_3:12872347-12872366 | Msa0799590:CDS | 45.0% | |
| !!! | GATATTTTTAAAATATATTT+GGG | - | chr5_3:12872012-12872031 | Msa0799590:intron | 5.0% |
| AGTGATCGGAGTAACACGGT+GGG | + | chr5_3:12865034-12865053 | None:intergenic | 50.0% | |
| GCAGAGTGATCGGAGTAACA+CGG | + | chr5_3:12865038-12865057 | None:intergenic | 50.0% | |
| CTTTACGCGTGCAGAGTGAT+CGG | + | chr5_3:12865048-12865067 | None:intergenic | 50.0% | |
| GTGTAGAGCAAGGCCGAATA+AGG | + | chr5_3:12865140-12865159 | None:intergenic | 50.0% | |
| !! | GTTGTGCTTGGTGTAGAGCA+AGG | + | chr5_3:12865150-12865169 | None:intergenic | 50.0% |
| ! | GGTTGAAAGGCCTAGTGGAT+GGG | + | chr5_3:12865182-12865201 | None:intergenic | 50.0% |
| GCTCGGAGAAGGAAAATCGT+CGG | + | chr5_3:12865203-12865222 | None:intergenic | 50.0% | |
| AAAAACGGGGCGAAGCAAAC+CGG | + | chr5_3:12865284-12865303 | None:intergenic | 50.0% | |
| !! | GGAAACTTCTGGCTCTTCTG+TGG | - | chr5_3:12865457-12865476 | Msa0799590:intron | 50.0% |
| !! | GTGTCGTGTTGGTGTTGTGT+TGG | + | chr5_3:12865882-12865901 | None:intergenic | 50.0% |
| ! | GTCGGAAGCAGTTGATGCTT+TGG | - | chr5_3:12866506-12866525 | Msa0799590:intron | 50.0% |
| GCATTTGGAGACTCAGCAAG+AGG | - | chr5_3:12866656-12866675 | Msa0799590:intron | 50.0% | |
| ATATGATGCTCGACATCGCG+TGG | - | chr5_3:12866872-12866891 | Msa0799590:intron | 50.0% | |
| CTCTACAGCTGCTTGCAACT+TGG | - | chr5_3:12866895-12866914 | Msa0799590:intron | 50.0% | |
| ATGAAAGCGGCTGGGCTAAA+TGG | - | chr5_3:12867351-12867370 | Msa0799590:intron | 50.0% | |
| TGGAAGCGGGGTGGTATTAT+TGG | - | chr5_3:12867371-12867390 | Msa0799590:intron | 50.0% | |
| !! | ATTGGTGCTGCAGCGTTAAC+TGG | - | chr5_3:12867389-12867408 | Msa0799590:intron | 50.0% |
| !! | TTGGTGCTGCAGCGTTAACT+GGG | - | chr5_3:12867390-12867409 | Msa0799590:intron | 50.0% |
| ! | GTTAACTGGGGGAGCTTTGA+TGG | - | chr5_3:12867403-12867422 | Msa0799590:intron | 50.0% |
| AAGTCCTGCAGCAATTGCTG+GGG | + | chr5_3:12867548-12867567 | None:intergenic | 50.0% | |
| CAAGTCCTGCAGCAATTGCT+GGG | + | chr5_3:12867549-12867568 | None:intergenic | 50.0% | |
| ! | GGTGCTTTGGCTCCAACTTT+AGG | - | chr5_3:12867568-12867587 | Msa0799590:intron | 50.0% |
| ATCCCTGTTATTGGAGCAGG+TGG | - | chr5_3:12867598-12867617 | Msa0799590:intron | 50.0% | |
| ! | GTTGCTGTTGCTGCCTCATT+TGG | - | chr5_3:12867664-12867683 | Msa0799590:CDS | 50.0% |
| GCGCGTTAGAAGGGTTGTAT+GGG | - | chr5_3:12868024-12868043 | Msa0799590:intron | 50.0% | |
| CTCTTTGTTCAACCAGCTGC+TGG | - | chr5_3:12868470-12868489 | Msa0799590:intron | 50.0% | |
| CTTCTGCTTGCAGAGATTGG+CGG | - | chr5_3:12868902-12868921 | Msa0799590:intron | 50.0% | |
| GTTAAGCTCCCACATCAGCT+AGG | - | chr5_3:12869083-12869102 | Msa0799590:intron | 50.0% | |
| ! | AGCCCCTTTTGCCAGTTTTG+CGG | + | chr5_3:12869217-12869236 | None:intergenic | 50.0% |
| ACTGGCAAAAGGGGCTAAAG+TGG | - | chr5_3:12869221-12869240 | Msa0799590:intron | 50.0% | |
| ! | GCCTATAGTGGAGTACAAGG+CGG | - | chr5_3:12869276-12869295 | Msa0799590:intron | 50.0% |
| ACCGCCTTGTACTCCACTAT+AGG | + | chr5_3:12869280-12869299 | None:intergenic | 50.0% | |
| CTTTCACAGACCAGGGCAAA+AGG | + | chr5_3:12869540-12869559 | None:intergenic | 50.0% | |
| ! | CTTTTGCCCTGGTCTGTGAA+AGG | - | chr5_3:12869538-12869557 | Msa0799590:intron | 50.0% |
| CGATGGAGCTGATGAAGCAA+GGG | - | chr5_3:12870006-12870025 | Msa0799590:intron | 50.0% | |
| GATGGAGCTGATGAAGCAAG+GGG | - | chr5_3:12870007-12870026 | Msa0799590:intron | 50.0% | |
| ACTCCATGCACATCTTGTGC+TGG | + | chr5_3:12870278-12870297 | None:intergenic | 50.0% | |
| AGCACAAGATGTGCATGGAG+TGG | - | chr5_3:12870277-12870296 | Msa0799590:intron | 50.0% | |
| GGCACAGTTGGCAGATAATG+GGG | - | chr5_3:12870421-12870440 | Msa0799590:intron | 50.0% | |
| GTCCCTTAAGCATGTGAGCA+TGG | - | chr5_3:12870443-12870462 | Msa0799590:intron | 50.0% | |
| TCCATATGCACCACCAAGCA+GGG | + | chr5_3:12870476-12870495 | None:intergenic | 50.0% | |
| TTCCATATGCACCACCAAGC+AGG | + | chr5_3:12870477-12870496 | None:intergenic | 50.0% | |
| GGAGAGGTCAACCCTTTAAG+TGG | - | chr5_3:12870509-12870528 | Msa0799590:intron | 50.0% | |
| !! | ATTAGTTTCTGGCTTCCGGC+TGG | - | chr5_3:12870549-12870568 | Msa0799590:intron | 50.0% |
| !! | TTAGTTTCTGGCTTCCGGCT+GGG | - | chr5_3:12870550-12870569 | Msa0799590:intron | 50.0% |
| TGGGAGGATTGCAGGGAAAT+AGG | - | chr5_3:12870817-12870836 | Msa0799590:CDS | 50.0% | |
| TTGCAATGGGTGCTCCAAGA+AGG | + | chr5_3:12871249-12871268 | None:intergenic | 50.0% | |
| ! | TGGAGCACCCATTGCAATCA+AGG | - | chr5_3:12871252-12871271 | Msa0799590:intron | 50.0% |
| AGCAACTCCAAGCATCCAGT+CGG | + | chr5_3:12871451-12871470 | None:intergenic | 50.0% | |
| TTAGGTGAGACAGTGCCTCA+CGG | + | chr5_3:12871827-12871846 | None:intergenic | 50.0% | |
| ! | GTGGGCTACACAACAGATCT+TGG | - | chr5_3:12872194-12872213 | Msa0799590:intron | 50.0% |
| GATCTGGATTCCCATGCATG+AGG | - | chr5_3:12872346-12872365 | Msa0799590:CDS | 50.0% | |
| GAGTGATCGGAGTAACACGG+TGG | + | chr5_3:12865035-12865054 | None:intergenic | 55.0% | |
| ! | AGATACGACGGTGATGGCGA+CGG | + | chr5_3:12865088-12865107 | None:intergenic | 55.0% |
| AGCAAGGCCGAATAAGGCTC+CGG | + | chr5_3:12865134-12865153 | None:intergenic | 55.0% | |
| CGGTTGAAAGGCCTAGTGGA+TGG | + | chr5_3:12865183-12865202 | None:intergenic | 55.0% | |
| ! | TCGTCGGTTGAAAGGCCTAG+TGG | + | chr5_3:12865187-12865206 | None:intergenic | 55.0% |
| AGGATCTTCGGAAACCGCAG+CGG | + | chr5_3:12865239-12865258 | None:intergenic | 55.0% | |
| GTGTCGTGAACCCAAAGGTC+AGG | + | chr5_3:12865259-12865278 | None:intergenic | 55.0% | |
| ! | CTTTGGGTTCACGACACCTC+CGG | - | chr5_3:12865262-12865281 | Msa0799590:exon | 55.0% |
| TGCAGCATGGTCTGGACTTG+AGG | - | chr5_3:12865436-12865455 | Msa0799590:intron | 55.0% | |
| TTCTGTGGCTACGCGTCATG+TGG | - | chr5_3:12865472-12865491 | Msa0799590:intron | 55.0% | |
| TCTGTGGCTACGCGTCATGT+GGG | - | chr5_3:12865473-12865492 | Msa0799590:intron | 55.0% | |
| !! | TGGTGCTGCAGCGTTAACTG+GGG | - | chr5_3:12867391-12867410 | Msa0799590:intron | 55.0% |
| CCAAGTCCTGCAGCAATTGC+TGG | + | chr5_3:12867550-12867569 | None:intergenic | 55.0% | |
| CCAGCAATTGCTGCAGGACT+TGG | - | chr5_3:12867547-12867566 | Msa0799590:intron | 55.0% | |
| !! | TGCTGCAGGACTTGGTGCTT+TGG | - | chr5_3:12867555-12867574 | Msa0799590:intron | 55.0% |
| AGTGCAGCAGGAACTGTTGC+TGG | - | chr5_3:12867637-12867656 | Msa0799590:CDS | 55.0% | |
| GCTGTTGCTGCCTCATTTGG+AGG | - | chr5_3:12867667-12867686 | Msa0799590:CDS | 55.0% | |
| GGCGCGTTAGAAGGGTTGTA+TGG | - | chr5_3:12868023-12868042 | Msa0799590:intron | 55.0% | |
| ! | AGGACGTACTAATGGGCCTG+TGG | + | chr5_3:12868275-12868294 | None:intergenic | 55.0% |
| TTCAACCAGCTGCTGGAGCA+GGG | - | chr5_3:12868477-12868496 | Msa0799590:intron | 55.0% | |
| ! | TAAGGACCGGAGGGAGTACA+AGG | + | chr5_3:12868695-12868714 | None:intergenic | 55.0% |
| GCGATGGAGCTGATGAAGCA+AGG | - | chr5_3:12870005-12870024 | Msa0799590:intron | 55.0% | |
| GCATGGGTTTGATCCCTGCT+TGG | - | chr5_3:12870460-12870479 | Msa0799590:intron | 55.0% | |
| TGGGTTTGATCCCTGCTTGG+TGG | - | chr5_3:12870463-12870482 | Msa0799590:intron | 55.0% | |
| !! | TCCCTGCTTGGTGGTGCATA+TGG | - | chr5_3:12870472-12870491 | Msa0799590:intron | 55.0% |
| !! | GGAAGAGCACTTGTTGGGAG+AGG | - | chr5_3:12870493-12870512 | Msa0799590:intron | 55.0% |
| !! | TAGTTTCTGGCTTCCGGCTG+GGG | - | chr5_3:12870551-12870570 | Msa0799590:intron | 55.0% |
| TCAAGGACCGACTGGATGCT+TGG | - | chr5_3:12871441-12871460 | Msa0799590:intron | 55.0% | |
| ! | TTGGAGTTGCTTTCCGTGCC+AGG | - | chr5_3:12871460-12871479 | Msa0799590:intron | 55.0% |
| ATTCCCATGCATGAGGGCTG+AGG | - | chr5_3:12872353-12872372 | Msa0799590:CDS | 55.0% | |
| GGCGTCAGATACGACGGTGA+TGG | + | chr5_3:12865094-12865113 | None:intergenic | 60.0% | |
| ! | TGCGTCGGCGTCAGATACGA+CGG | + | chr5_3:12865100-12865119 | None:intergenic | 60.0% |
| !! | TACGCCGCCGGAGCCTTATT+CGG | - | chr5_3:12865124-12865143 | Msa0799590:three_prime_UTR | 60.0% |
| AAGGCCGAATAAGGCTCCGG+CGG | + | chr5_3:12865131-12865150 | None:intergenic | 60.0% | |
| ATCTTCGGAAACCGCAGCGG+TGG | + | chr5_3:12865236-12865255 | None:intergenic | 60.0% | |
| !! | CGGAGGTGTCGTGAACCCAA+AGG | + | chr5_3:12865264-12865283 | None:intergenic | 60.0% |
| GCGGCTGGGCTAAATGGAAG+CGG | - | chr5_3:12867357-12867376 | Msa0799590:intron | 60.0% | |
| CGGCTGGGCTAAATGGAAGC+GGG | - | chr5_3:12867358-12867377 | Msa0799590:intron | 60.0% | |
| GGCTGGGCTAAATGGAAGCG+GGG | - | chr5_3:12867359-12867378 | Msa0799590:intron | 60.0% | |
| TGGGCTAAATGGAAGCGGGG+TGG | - | chr5_3:12867362-12867381 | Msa0799590:intron | 60.0% | |
| ! | GGTGCTGCAGCGTTAACTGG+GGG | - | chr5_3:12867392-12867411 | Msa0799590:intron | 60.0% |
| GTTCAACCAGCTGCTGGAGC+AGG | - | chr5_3:12868476-12868495 | Msa0799590:intron | 60.0% | |
| GTAGCGGCAAGCAATGCAGC+TGG | + | chr5_3:12870077-12870096 | None:intergenic | 60.0% | |
| ACGCCTCAGCCCTCATGCAT+GGG | + | chr5_3:12872359-12872378 | None:intergenic | 60.0% | |
| CCGGCGGCGTATCTTTGCGT+CGG | + | chr5_3:12865115-12865134 | None:intergenic | 65.0% | |
| CCGACGCAAAGATACGCCGC+CGG | - | chr5_3:12865112-12865131 | Msa0799590:three_prime_UTR | 65.0% | |
| GCGGTGGAACTGCTCGGAGA+AGG | + | chr5_3:12865214-12865233 | None:intergenic | 65.0% | |
| TTCGGAAACCGCAGCGGTGG+CGG | + | chr5_3:12865233-12865252 | None:intergenic | 65.0% | |
| AACGGGGCGAAGCAAACCGG+AGG | + | chr5_3:12865281-12865300 | None:intergenic | 65.0% | |
| GGCTACGCGTCATGTGGGAC+CGG | - | chr5_3:12865478-12865497 | Msa0799590:intron | 65.0% | |
| GCTGCCCCAGCAATTGCTGC+AGG | - | chr5_3:12867541-12867560 | Msa0799590:intron | 65.0% | |
| GCAGCAGCTGCTAGTGCAGC+AGG | - | chr5_3:12867625-12867644 | Msa0799590:intron | 65.0% | |
| GTAAGCCCTGCTCCAGCAGC+TGG | + | chr5_3:12868485-12868504 | None:intergenic | 65.0% | |
| GCTGCTGGAGCAGGGCTTAC+TGG | - | chr5_3:12868485-12868504 | Msa0799590:intron | 65.0% | |
| CTTCCGGCTGGGGATCCCTT+GGG | - | chr5_3:12870561-12870580 | Msa0799590:intron | 65.0% | |
| TTGCCCAAGGGATCCCCAGC+CGG | + | chr5_3:12870567-12870586 | None:intergenic | 65.0% | |
| CACGCCTCAGCCCTCATGCA+TGG | + | chr5_3:12872360-12872379 | None:intergenic | 65.0% | |
| ! | GCGGTGGCGGTGGAACTGCT+CGG | + | chr5_3:12865220-12865239 | None:intergenic | 70.0% |
| CAGTTCCACCGCCACCGCTG+CGG | - | chr5_3:12865222-12865241 | Msa0799590:three_prime_UTR | 70.0% | |
| GCTTCCGGCTGGGGATCCCT+TGG | - | chr5_3:12870560-12870579 | Msa0799590:intron | 70.0% | |
| ! | GGAAACCGCAGCGGTGGCGG+TGG | + | chr5_3:12865230-12865249 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 12864970 | 12872571 | 12864970 | ID=Msa0799590;Name=Msa0799590 |
| chr5_3 | mRNA | 12864970 | 12872571 | 12864970 | ID=Msa0799590-mRNA-1;Parent=Msa0799590;Name=Msa0799590-mRNA-1;_AED=0.10;_eAED=0.10;_QI=103|0.78|0.8|1|0.71|0.8|15|296|606 |
| chr5_3 | exon | 12864970 | 12865388 | 12864970 | ID=Msa0799590-mRNA-1:exon:5307;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12865575 | 12865632 | 12865575 | ID=Msa0799590-mRNA-1:exon:5306;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12866060 | 12866130 | 12866060 | ID=Msa0799590-mRNA-1:exon:5305;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12866241 | 12866317 | 12866241 | ID=Msa0799590-mRNA-1:exon:5304;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12866536 | 12866618 | 12866536 | ID=Msa0799590-mRNA-1:exon:5303;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12866703 | 12866762 | 12866703 | ID=Msa0799590-mRNA-1:exon:5302;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12867406 | 12867541 | 12867406 | ID=Msa0799590-mRNA-1:exon:5301;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12867630 | 12867700 | 12867630 | ID=Msa0799590-mRNA-1:exon:5300;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12868535 | 12868584 | 12868535 | ID=Msa0799590-mRNA-1:exon:5299;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12868958 | 12869055 | 12868958 | ID=Msa0799590-mRNA-1:exon:5298;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12869853 | 12870005 | 12869853 | ID=Msa0799590-mRNA-1:exon:5297;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12870104 | 12870269 | 12870104 | ID=Msa0799590-mRNA-1:exon:5296;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12870600 | 12870793 | 12870600 | ID=Msa0799590-mRNA-1:exon:5295;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12870809 | 12871056 | 12870809 | ID=Msa0799590-mRNA-1:exon:5294;Parent=Msa0799590-mRNA-1 |
| chr5_3 | exon | 12872236 | 12872571 | 12872236 | ID=Msa0799590-mRNA-1:exon:5293;Parent=Msa0799590-mRNA-1 |
| chr5_3 | five_prime_UTR | 12872469 | 12872571 | 12872469 | ID=Msa0799590-mRNA-1:five_prime_utr;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12872236 | 12872468 | 12872236 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12870809 | 12871056 | 12870809 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12870600 | 12870793 | 12870600 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12870104 | 12870269 | 12870104 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12869853 | 12870005 | 12869853 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12868958 | 12869055 | 12868958 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12868535 | 12868584 | 12868535 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12867630 | 12867700 | 12867630 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12867406 | 12867541 | 12867406 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12866703 | 12866762 | 12866703 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12866536 | 12866618 | 12866536 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12866241 | 12866317 | 12866241 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12866060 | 12866130 | 12866060 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12865575 | 12865632 | 12865575 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | CDS | 12865266 | 12865388 | 12865266 | ID=Msa0799590-mRNA-1:cds;Parent=Msa0799590-mRNA-1 |
| chr5_3 | three_prime_UTR | 12864970 | 12865265 | 12864970 | ID=Msa0799590-mRNA-1:three_prime_utr;Parent=Msa0799590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
