AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0717190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0717190 MtrunA17_Chr5g0405061 97.893 617 13 0 644 1260 23 639 0.0 1252
Msa0717190 MtrunA17_Chr5g0405071 97.338 601 16 0 1 601 1 601 0.0 1219
Msa0717190 MtrunA17_Chr3g0145201 55.021 478 196 7 72 537 207 677 7.52e-155 491
Msa0717190 MtrunA17_Chr3g0145241 54.545 407 171 4 207 601 5 409 2.99e-122 384
Msa0717190 MtrunA17_Chr5g0405031 65.236 233 71 6 60 287 33 260 1.10e-90 308
Msa0717190 MtrunA17_Chr5g0405031 38.235 510 201 9 645 1104 249 694 1.41e-77 271
Msa0717190 MtrunA17_Chr3g0109611 29.520 542 330 12 97 610 15 532 1.79e-58 211
Msa0717190 MtrunA17_Chr3g0109631 27.629 485 309 11 97 561 15 477 9.26e-51 187
Msa0717190 MtrunA17_Chr3g0109641 28.718 585 325 19 97 609 15 579 4.43e-50 192
Msa0717190 MtrunA17_Chr3g0109591 28.571 420 274 8 93 495 9 419 2.85e-44 166
Msa0717190 MtrunA17_Chr6g0477441 33.642 324 176 11 303 615 39 334 1.52e-34 136
Msa0717190 MtrunA17_Chr3g0109671 39.695 131 78 1 90 219 7 137 9.04e-30 115
Msa0717190 MtrunA17_Chr7g0274551 37.121 132 75 1 64 195 1 124 2.93e-27 108
Msa0717190 MtrunA17_Chr7g0274561 28.184 369 221 11 207 567 29 361 5.44e-27 115
Msa0717190 MtrunA17_Chr3g0145231 61.667 60 23 0 142 201 4 63 5.93e-25 99.8
Msa0717190 MtrunA17_Chr3g0145221 61.538 78 26 2 72 149 207 280 3.83e-24 105
Msa0717190 MtrunA17_Chr7g0274571 29.617 287 160 9 282 557 64 319 2.88e-23 102
Msa0717190 MtrunA17_Chr3g0145251 47.826 92 47 1 699 789 125 216 4.25e-19 93.2
Msa0717190 MtrunA17_Chr3g0145251 41.441 111 57 6 1152 1259 523 628 2.52e-11 68.2
Msa0717190 MtrunA17_Chr3g0109661 33.333 126 75 3 437 561 41 158 5.22e-13 68.9
Msa0717190 MtrunA17_Chr3g0109581 41.176 85 48 1 523 607 73 155 1.65e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0717190 AT3G51120.1 49.153 767 321 15 64 800 71 798 0.0 674
Msa0717190 AT2G16485.1 44.293 806 350 19 96 816 598 1389 0.0 619
Msa0717190 AT2G16485.2 44.571 792 353 19 96 816 598 1374 0.0 612
Msa0717190 AT2G18090.2 52.778 324 143 3 86 399 68 391 4.13e-114 376
Msa0717190 AT2G18090.2 34.930 355 211 9 723 1068 448 791 8.16e-37 150
Msa0717190 AT2G18090.1 52.778 324 143 3 86 399 68 391 8.69e-114 376
Msa0717190 AT2G18090.1 33.422 377 216 9 723 1068 448 820 5.41e-36 148
Msa0717190 AT5G63700.1 27.437 554 319 15 100 598 25 550 4.83e-54 200
Msa0717190 AT5G63700.2 26.923 520 303 13 100 567 25 519 1.09e-52 194
Msa0717190 AT5G08430.2 33.333 297 170 9 303 598 32 301 8.55e-32 130
Msa0717190 AT5G08430.1 32.660 297 172 8 303 598 32 301 1.27e-31 132
Msa0717190 AT5G23480.3 25.902 305 184 8 303 598 27 298 5.46e-20 95.1
Msa0717190 AT5G23480.2 25.902 305 184 8 303 598 27 298 5.46e-20 95.1
Msa0717190 AT5G23480.5 25.902 305 184 8 303 598 27 298 5.46e-20 95.1
Msa0717190 AT5G23480.4 25.902 305 184 8 303 598 27 298 5.46e-20 95.1
Msa0717190 AT5G23480.6 25.902 305 184 8 303 598 27 298 5.46e-20 95.1
Msa0717190 AT5G23480.1 25.773 291 170 9 303 584 27 280 1.31e-17 87.4

Find 319 sgRNAs with CRISPR-Local

Find 489 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAGAATAAAATGAAAATT+TGG 0.133311 5_1:+10891866 None:intergenic
CCAGGTTAAATTACAATAAT+TGG 0.138948 5_1:+10892018 None:intergenic
AATACTTCCACCCATGATTT+TGG 0.149348 5_1:-10892104 Msa0717190:exon
ACCCCTGCAGAAAATAATTT+TGG 0.173795 5_1:-10895977 Msa0717190:CDS
TTGTTAACTGATGCACTTAA+TGG 0.202378 5_1:-10893536 Msa0717190:CDS
CTCATACAATGAATCCAAAT+TGG 0.204917 5_1:+10894098 None:intergenic
AGAATCACACCAACAAATTA+AGG 0.216582 5_1:-10893226 Msa0717190:CDS
GGAGCTGTTTGTGATAATTT+TGG 0.228997 5_1:+10898685 None:intergenic
CATACTCCAGCAAGAGATTC+TGG 0.236810 5_1:+10896143 None:intergenic
GTTGCAGTTGCCGGTGTTTC+CGG 0.245228 5_1:+10898472 None:intergenic
GTTGCTGAACCTTACAAAAT+TGG 0.246056 5_1:-10895538 Msa0717190:CDS
TGGAAGAAGTATTTACATTA+TGG 0.249164 5_1:+10893051 None:intergenic
TGTACACTCTGACCCCAATT+TGG 0.264861 5_1:-10894112 Msa0717190:CDS
TACCATCTTAAAGATGAAAA+AGG 0.271358 5_1:-10896355 Msa0717190:CDS
ATCAATAATCATGAATAATT+AGG 0.282662 5_1:+10898558 None:intergenic
CTGTAGTAACTCCAAGCTTT+GGG 0.292547 5_1:-10892347 Msa0717190:CDS
TGAATCAGTTTCAGATCTTT+TGG 0.293661 5_1:-10892883 Msa0717190:CDS
CATTTCCATTTCCATGTGTT+AGG 0.299346 5_1:-10898641 Msa0717190:five_prime_UTR
ACCCACAGTTTAGCATATTT+AGG 0.300163 5_1:+10894700 None:intergenic
TCAAATGCGGCCAATGCTAA+TGG 0.306495 5_1:+10892078 None:intergenic
ATGATCCTCCCTTAATTTGT+TGG 0.309490 5_1:+10893217 None:intergenic
AGTAAGCATGTATTCTCAAT+TGG 0.319348 5_1:+10893848 None:intergenic
TACATGTATAGCACATATAA+TGG 0.327124 5_1:+10896846 None:intergenic
GATCACTTCCGTATCTTGTT+TGG 0.332764 5_1:+10892319 None:intergenic
TTGCGTCAAAGTATAAAGTA+TGG 0.336240 5_1:-10895297 Msa0717190:CDS
TCTAGACTAGTAAATTTGTT+TGG 0.338628 5_1:-10896067 Msa0717190:CDS
CAAGAATAAAATGAAAATTT+GGG 0.340376 5_1:+10891867 None:intergenic
ACTACGTGGCAGGCTATTAT+AGG 0.342752 5_1:-10892924 Msa0717190:CDS
CTTCATAACCTCACTGTTCT+CGG 0.347536 5_1:+10898294 None:intergenic
TGATAGATCATGGCATTATC+AGG 0.347539 5_1:-10893681 Msa0717190:CDS
CTCTGATCTGTTCTATGATT+CGG 0.347556 5_1:+10893378 None:intergenic
CAAGACACCATCCCAAATTC+TGG 0.350471 5_1:+10893916 None:intergenic
TAAGAGATGCACAAGTAAAA+AGG 0.350827 5_1:-10895876 Msa0717190:CDS
GAACAGTGCCCAGGGAAATA+AGG 0.351756 5_1:-10896720 Msa0717190:CDS
ATGGTGTCTTGAATGGTGTT+GGG 0.358098 5_1:-10893904 Msa0717190:CDS
ACCAGGAAAACCCCGATCTC+TGG 0.361017 5_1:+10892284 None:intergenic
CCGCCATTTGGTGTTGGAAA+TGG 0.361150 5_1:-10892210 Msa0717190:CDS
TCATCAATAGGAGTTTCGTT+TGG 0.363221 5_1:+10893809 None:intergenic
CAAAATACCGCAATTCCATT+TGG 0.365981 5_1:+10897873 None:intergenic
AGGGAACCAGGTTTAGTTAG+AGG 0.373757 5_1:-10892255 Msa0717190:CDS
GACAGTTCCGGCGACAGTTC+CGG 0.375702 5_1:-10898446 Msa0717190:CDS
TCATACAATGAATCCAAATT+GGG 0.377658 5_1:+10894099 None:intergenic
TACAGCTGCAACATAGAAAA+AGG 0.377698 5_1:+10893635 None:intergenic
TCCCTCCAGATCTCAAAGTA+TGG 0.380048 5_1:-10893589 Msa0717190:CDS
ATTGCATGCTGGAGGGGAAG+GGG 0.380816 5_1:+10892950 None:intergenic
GTTTCTGTTAGAGAAAATAA+AGG 0.383747 5_1:-10896782 Msa0717190:CDS
TGTTAACTGATGCACTTAAT+GGG 0.385550 5_1:-10893535 Msa0717190:CDS
GATCCATTCCTCCCCATTCC+AGG 0.385876 5_1:+10892445 None:intergenic
TCCCAAATTCTGGAGAAAAT+AGG 0.386571 5_1:+10893926 None:intergenic
CATGACTCAAACAGGACTTC+TGG 0.386601 5_1:-10893161 Msa0717190:CDS
TCTGTAGTAACTCCAAGCTT+TGG 0.386688 5_1:-10892348 Msa0717190:CDS
CATCAATAGGAGTTTCGTTT+GGG 0.387224 5_1:+10893810 None:intergenic
GATGGTGTCTTGAATGGTGT+TGG 0.389454 5_1:-10893905 Msa0717190:CDS
ATTGCGGCTTAATAATCTTC+GGG 0.390772 5_1:-10894778 Msa0717190:CDS
TCTTCCTTCTTGATCTGCTT+CGG 0.391127 5_1:+10898223 None:intergenic
TTTACAAACTCGCTGCCCTT+TGG 0.394552 5_1:+10892167 None:intergenic
TATAGACTTGTCCAAGTTGT+AGG 0.396375 5_1:-10895665 Msa0717190:intron
ATATTTAGGAAAGAAGTAAA+TGG 0.401021 5_1:+10894714 None:intergenic
TTACAAACTCGCTGCCCTTT+GGG 0.401113 5_1:+10892168 None:intergenic
CATTGCATGCTGGAGGGGAA+GGG 0.401547 5_1:+10892949 None:intergenic
GACAGTTCCGGTGGCCGTTA+CGG 0.402343 5_1:-10898434 Msa0717190:CDS
TCAAGTAACCAGTGGGAGTC+AGG 0.405251 5_1:-10892555 Msa0717190:CDS
CCTGGTCATGGTAGGGAACC+AGG 0.405604 5_1:-10892267 Msa0717190:CDS
GATAGACGAGATTTCGAATC+AGG 0.407835 5_1:-10895455 Msa0717190:CDS
TCATCTCCACTTATCTCTAC+AGG 0.407890 5_1:-10893734 Msa0717190:CDS
ACTGTCGCCGTTGCAGTTGC+CGG 0.409937 5_1:+10898463 None:intergenic
CTCATTCAAATTCTCAGAAA+AGG 0.410353 5_1:+10893247 None:intergenic
AAATACTTCTTCCAATTGCT+TGG 0.413010 5_1:-10893042 Msa0717190:CDS
CTTTAAGATGGTAAAGTTTG+TGG 0.413487 5_1:+10896365 None:intergenic
ATTTCCATTTCCATGTGTTA+GGG 0.414761 5_1:-10898640 Msa0717190:five_prime_UTR
ACGAAATGCAAACACGAGTT+GGG 0.415413 5_1:-10892421 Msa0717190:CDS
CTAACACATGGAAATGGAAA+TGG 0.415532 5_1:+10898642 None:intergenic
GGCAATCTTCGGCACAAAGC+TGG 0.416012 5_1:-10893079 Msa0717190:CDS
AATTGCGGCTTAATAATCTT+CGG 0.416863 5_1:-10894779 Msa0717190:CDS
ATTCATCTTTACCATTAGAC+TGG 0.419959 5_1:+10893330 None:intergenic
AACAGCCTATTGCTCTCTTT+AGG 0.421297 5_1:-10893482 Msa0717190:CDS
GCATTGCATGCTGGAGGGGA+AGG 0.421721 5_1:+10892948 None:intergenic
GAGGCAGAGCTGCGTGGAAC+AGG 0.422436 5_1:-10892236 Msa0717190:CDS
TGATGTCCAGAATCTCTTGC+TGG 0.429046 5_1:-10896149 Msa0717190:CDS
TGGTGTCTTGAATGGTGTTG+GGG 0.429149 5_1:-10893903 Msa0717190:CDS
TTCGGCGGAGGAGCTACTTT+CGG 0.429190 5_1:+10898241 None:intergenic
CTATGTTGCAGCTGTATAAG+TGG 0.431594 5_1:-10893628 Msa0717190:CDS
CAAATGCGGCCAATGCTAAT+GGG 0.434386 5_1:+10892079 None:intergenic
TTTCCAGCCACTGCAACATT+GGG 0.434638 5_1:-10892513 Msa0717190:CDS
TGGCTCCTAAAGAGAGCAAT+AGG 0.435384 5_1:+10893477 None:intergenic
AAGAACATCACCACTTAAGC+TGG 0.437573 5_1:-10892991 Msa0717190:CDS
TGGCATTATCAGGATCCATC+TGG 0.437750 5_1:-10893671 Msa0717190:CDS
ATGGAAATCATGACTCAAAC+AGG 0.438689 5_1:-10893169 Msa0717190:CDS
TGGAACAGGCAACCGCCATT+TGG 0.439002 5_1:-10892222 Msa0717190:CDS
GAAAGTAGAGAGAGAATATG+TGG 0.439258 5_1:+10898754 None:intergenic
GTAAGCATGTATTCTCAATT+GGG 0.439319 5_1:+10893849 None:intergenic
GTAGACACCACTTGGAGACT+TGG 0.445086 5_1:-10892483 Msa0717190:CDS
AATGGAATCGCTTGGTGGCT+TGG 0.445389 5_1:-10892847 Msa0717190:CDS
GAAGAAGAAGCGCGGTCGTC+CGG 0.446023 5_1:-10898275 Msa0717190:CDS
TTATAAGAAAGTGGGGTTCA+AGG 0.447841 5_1:+10896008 None:intergenic
ATCCTCCATACTTTGAGATC+TGG 0.448703 5_1:+10893584 None:intergenic
ACTGATTCATCAAAATCATC+TGG 0.450681 5_1:+10892897 None:intergenic
TTGGGGTCAGAGTGTACATC+TGG 0.451024 5_1:+10894117 None:intergenic
ACATGTATAGCACATATAAT+GGG 0.452039 5_1:+10896847 None:intergenic
ACATCAGCACTATCATCAAT+AGG 0.453370 5_1:+10893797 None:intergenic
AAAACCCTAACACATGGAAA+TGG 0.453549 5_1:+10898636 None:intergenic
AATGAGCAATCACATAAAAC+AGG 0.454988 5_1:+10891943 None:intergenic
GGAAAGTACACACCTGGAAT+GGG 0.456457 5_1:-10892457 Msa0717190:CDS
GATACTTCGACCCAGTCTAA+TGG 0.457443 5_1:-10893341 Msa0717190:CDS
ATGCCCAATGTTGCAGTGGC+TGG 0.457866 5_1:+10892510 None:intergenic
AACTGCAACGGCGACAGTTC+CGG 0.462520 5_1:-10898458 Msa0717190:CDS
TTTAAGATGGTAAAGTTTGT+GGG 0.462817 5_1:+10896366 None:intergenic
ATTGAGCGCTGCTGCTCCTA+TGG 0.466028 5_1:-10896398 Msa0717190:CDS
TTGCATGCTGGAGGGGAAGG+GGG 0.466493 5_1:+10892951 None:intergenic
CTACTTGCGGCGAAGTCTGA+TGG 0.467567 5_1:-10895783 Msa0717190:CDS
CTTGTGTTACCAATTAGTAC+TGG 0.469998 5_1:-10891848 Msa0717190:three_prime_UTR
GTTTGCTTCATTTGCTTCGA+CGG 0.470458 5_1:-10898193 Msa0717190:CDS
ATACCATTTCCTTATTTCCC+TGG 0.470501 5_1:+10896711 None:intergenic
GAAGAGATCTCTATCAAGCT+AGG 0.470692 5_1:+10898727 None:intergenic
TGGAAAGTACACACCTGGAA+TGG 0.470741 5_1:-10892458 Msa0717190:CDS
TAGGAGCAGCAGCGCTCAAT+GGG 0.471296 5_1:+10896401 None:intergenic
GATCCATCTGGGAAGGTTCA+AGG 0.471913 5_1:-10893659 Msa0717190:CDS
CTCAATTGGGTCACTGGCAG+TGG 0.472098 5_1:+10893862 None:intergenic
GTTTGGCTATCCCCAAAGCT+TGG 0.472616 5_1:+10892336 None:intergenic
AGGATTCACGAGAAGGTTGT+TGG 0.472648 5_1:-10895737 Msa0717190:CDS
TTGTGGGAAGTTTGAACCAT+AGG 0.473304 5_1:+10896382 None:intergenic
TGATGTGGTATCCAAGCAAT+TGG 0.476003 5_1:+10893031 None:intergenic
CAATTAGAGATTTCTGTTGA+GGG 0.477581 5_1:+10896098 None:intergenic
TACCATTTCCTTATTTCCCT+GGG 0.478038 5_1:+10896712 None:intergenic
CACCACTTGGAGACTTGGAT+TGG 0.478908 5_1:-10892478 Msa0717190:CDS
AAGAAGCCTAAGGGACCTTC+AGG 0.481000 5_1:-10896280 Msa0717190:CDS
ATTAGTGATGCTGTTGCAAA+TGG 0.481762 5_1:-10895947 Msa0717190:CDS
CGTATAGACCTCTGCCCAAA+GGG 0.484540 5_1:-10892182 Msa0717190:CDS
CCTCCATTTCCAACACCAAA+TGG 0.485963 5_1:+10892207 None:intergenic
ATAGGAGCAGCAGCGCTCAA+TGG 0.488771 5_1:+10896400 None:intergenic
ATTTGGGATGGTGTCTTGAA+TGG 0.488863 5_1:-10893911 Msa0717190:CDS
GCTAATGGGATCCAAAATCA+TGG 0.489646 5_1:+10892093 None:intergenic
CCAATTATTGTAATTTAACC+TGG 0.490055 5_1:-10892018 Msa0717190:three_prime_UTR
ATGCAATGCAACTACGTGGC+AGG 0.491186 5_1:-10892934 Msa0717190:CDS
TGTATTCTCAATTGGGTCAC+TGG 0.492209 5_1:+10893856 None:intergenic
CTATCGATATGACCTCCTTC+CGG 0.492961 5_1:+10895473 None:intergenic
GTCTCGTTCTCTGCGATCGC+CGG 0.493648 5_1:-10898165 Msa0717190:intron
TTCTTGATCTGCTTCGGCGG+AGG 0.494190 5_1:+10898229 None:intergenic
ACAATTAGAGATTTCTGTTG+AGG 0.494879 5_1:+10896097 None:intergenic
ATGAAAATTTGGGGTCAGAA+AGG 0.495655 5_1:+10891877 None:intergenic
GATGAATCCGTTAGGAGCAA+TGG 0.495944 5_1:-10893314 Msa0717190:CDS
AACGAAATGCAAACACGAGT+TGG 0.499133 5_1:-10892422 Msa0717190:CDS
GAATCACACCAACAAATTAA+GGG 0.500251 5_1:-10893225 Msa0717190:CDS
ACATGGAAATGGAAATGGAC+TGG 0.500309 5_1:+10898647 None:intergenic
TTTAGGAGCCAATGTTGCAT+TGG 0.503048 5_1:-10893465 Msa0717190:CDS
ATTTCGATGACAAGAGCAGC+TGG 0.503366 5_1:-10896504 Msa0717190:CDS
CACGCCGGATGATACGCTTT+AGG 0.504465 5_1:+10897931 None:intergenic
ATTTATGGAACAATCAAAGC+CGG 0.504469 5_1:-10898491 Msa0717190:exon
TGCCCAGGGAAATAAGGAAA+TGG 0.504537 5_1:-10896714 Msa0717190:intron
ACTCGCTGCCCTTTGGGCAG+AGG 0.505416 5_1:+10892174 None:intergenic
TTTATGAAAGTGGGTACTGT+AGG 0.507920 5_1:-10892143 Msa0717190:CDS
AACAAATTAAGGGAGGATCA+TGG 0.508647 5_1:-10893215 Msa0717190:CDS
ACAAATTAAGGGAGGATCAT+GGG 0.508655 5_1:-10893214 Msa0717190:CDS
CATCTCCACTTATCTCTACA+GGG 0.508658 5_1:-10893733 Msa0717190:CDS
ATCCGTAACATATCTGTAGT+TGG 0.508677 5_1:-10892047 Msa0717190:three_prime_UTR
TCTTCCGTTCAAAAGCCAAA+TGG 0.509901 5_1:-10897888 Msa0717190:CDS
CTCCGCCGCGGTCTCCGTAA+CGG 0.511292 5_1:+10898420 None:intergenic
GAGAGACGGCGGTTGTTGTA+CGG 0.511402 5_1:-10898344 Msa0717190:CDS
TTTGTCATCCAATGCAACAT+TGG 0.511832 5_1:+10893457 None:intergenic
AGGAAAGAAGTAAATGGTAA+AGG 0.514336 5_1:+10894720 None:intergenic
TTGTTTGGAAAAGCTCGTCT+TGG 0.514641 5_1:-10896052 Msa0717190:CDS
AAAGTGGGTACTGTAGGAAA+GGG 0.516641 5_1:-10892137 Msa0717190:CDS
AATCGTGAGTGAGCAATAGT+AGG 0.518532 5_1:-10898831 Msa0717190:five_prime_UTR
TTTCCGAGCCTGACTCCCAC+TGG 0.518669 5_1:+10892547 None:intergenic
GACACTTGACTAGTACTGCC+AGG 0.521563 5_1:+10892000 None:intergenic
CCATTTGGTGTTGGAAATGG+AGG 0.521839 5_1:-10892207 Msa0717190:CDS
TACTATTGCTCACTCACGAT+TGG 0.522522 5_1:+10898833 None:intergenic
GCTGATTGAGAACAGTGCCC+AGG 0.522778 5_1:-10896729 Msa0717190:CDS
AGACAACTCAGGGCAATCTT+CGG 0.526028 5_1:-10893090 Msa0717190:CDS
TCATTCATAAAATCATCAAA+TGG 0.527514 5_1:+10893701 None:intergenic
AGCCAACTACAGATATGTTA+CGG 0.527767 5_1:+10892045 None:intergenic
AGGCAACCGCCATTTGGTGT+TGG 0.528746 5_1:-10892216 Msa0717190:CDS
TCCTTCTTGATCTGCTTCGG+CGG 0.529690 5_1:+10898226 None:intergenic
AAATTCTCAGAAAAGGCAGT+TGG 0.530404 5_1:+10893254 None:intergenic
GCGGTCTCCGTAACGGCCAC+CGG 0.530407 5_1:+10898427 None:intergenic
ATGACAGCGAGAACTACTTT+CGG 0.532438 5_1:+10898319 None:intergenic
ACACCTGGAATGGGGAGGAA+TGG 0.534911 5_1:-10892448 Msa0717190:CDS
CCAGGAAAACCCCGATCTCT+GGG 0.536704 5_1:+10892285 None:intergenic
TGTACGTATTCTTTGTGCAA+GGG 0.539143 5_1:-10896827 Msa0717190:CDS
ATGGTAAAGATGAATCCGTT+AGG 0.539201 5_1:-10893322 Msa0717190:CDS
AAATCAAATCCCAGCTTAAG+TGG 0.540274 5_1:+10892981 None:intergenic
GAAAGTGGGTACTGTAGGAA+AGG 0.542249 5_1:-10892138 Msa0717190:CDS
TTTGGCAGAAGTGGAGGCAA+TGG 0.543632 5_1:-10892865 Msa0717190:CDS
AAGAGATCTCTATCAAGCTA+GGG 0.544078 5_1:+10898728 None:intergenic
GGAAACACCGGCAACTGCAA+CGG 0.545158 5_1:-10898470 Msa0717190:CDS
CTCCATACTTTGAGATCTGG+AGG 0.545239 5_1:+10893587 None:intergenic
CTTAGTCCAATGCTTGATGC+AGG 0.546756 5_1:-10892747 Msa0717190:CDS
TGCTTCATTTGCTTCGACGG+TGG 0.548926 5_1:-10898190 Msa0717190:CDS
GGACCTTCAGGCGGTGACAC+GGG 0.549683 5_1:-10896268 Msa0717190:CDS
GACTGGGTTCAGATGTAAGA+AGG 0.551185 5_1:+10898664 None:intergenic
GTGCAAGAGATGGGCATCAA+AGG 0.552347 5_1:-10896230 Msa0717190:CDS
TCTGGTGGTCAGAGTAATAG+TGG 0.552718 5_1:-10893143 Msa0717190:CDS
GGGGATAGCCAAACAAGATA+CGG 0.553183 5_1:-10892327 Msa0717190:CDS
TTGACATCTGCTTGTTGTAA+CGG 0.553275 5_1:+10892657 None:intergenic
TCATGGGTGGAAGTATTCAC+AGG 0.553606 5_1:+10892110 None:intergenic
TTCATCTTTACCATTAGACT+GGG 0.555707 5_1:+10893331 None:intergenic
CACGTAGTTGCATTGCATGC+TGG 0.557373 5_1:+10892939 None:intergenic
GATGCCCATCTCTTGCACTC+AGG 0.561219 5_1:+10896235 None:intergenic
GGCATTATCAGGATCCATCT+GGG 0.561353 5_1:-10893670 Msa0717190:CDS
GGTGTCTTGAATGGTGTTGG+GGG 0.561455 5_1:-10893902 Msa0717190:CDS
TATGAGTCTGATGAAGATGC+TGG 0.561952 5_1:-10894081 Msa0717190:CDS
TTTAAATTTAAACCGGAAGG+AGG 0.562088 5_1:-10895485 Msa0717190:CDS
ATGTACGTATTCTTTGTGCA+AGG 0.562282 5_1:-10896828 Msa0717190:CDS
GTGGAGGCAATGGAATCGCT+TGG 0.564327 5_1:-10892855 Msa0717190:CDS
AAGCGCGGTCGTCCGGCGAA+AGG 0.564717 5_1:-10898268 Msa0717190:CDS
GGGACCTTCAGGCGGTGACA+CGG 0.565507 5_1:-10896269 Msa0717190:CDS
ACGGCCACCGGAACTGTCGC+CGG 0.565692 5_1:+10898439 None:intergenic
CTACGTTTCATGATTGAAGT+GGG 0.566724 5_1:+10892819 None:intergenic
AGTTGCATTGCATGCTGGAG+GGG 0.567218 5_1:+10892944 None:intergenic
CATGGAAATGGAAATGGACT+GGG 0.568147 5_1:+10898648 None:intergenic
AAGAAAGCAGTCAGGATGGT+GGG 0.568241 5_1:-10893436 Msa0717190:CDS
AGAGAAAATAAAGGTTTGTG+TGG 0.570122 5_1:-10896773 Msa0717190:CDS
TAACCAGTGGGAGTCAGGCT+CGG 0.570435 5_1:-10892550 Msa0717190:CDS
ACAATCAAAGCCGGAAACAC+CGG 0.571841 5_1:-10898482 Msa0717190:CDS
CGGGATAGAGCAAGTGAGAA+GGG 0.572104 5_1:-10894759 Msa0717190:CDS
GGATGACAAAGAAAGCAGTC+AGG 0.572470 5_1:-10893444 Msa0717190:CDS
TCGTATAGACCTCTGCCCAA+AGG 0.573598 5_1:-10892183 Msa0717190:CDS
TATTGGAAGCTGAGAAATTG+CGG 0.573970 5_1:-10894794 Msa0717190:CDS
TGCGTCAAAGTATAAAGTAT+GGG 0.574180 5_1:-10895296 Msa0717190:CDS
ACATCGGAAACAGCCTTCGT+CGG 0.576936 5_1:+10898379 None:intergenic
TTCCTAAATATGCTAAACTG+TGG 0.578015 5_1:-10894702 Msa0717190:CDS
GCAAGTTGAAGTTCCGACGA+AGG 0.578052 5_1:-10898392 Msa0717190:CDS
GCATGACTGTAGACACCACT+TGG 0.578287 5_1:-10892491 Msa0717190:CDS
ATTTGATTCTATATCTACAC+AGG 0.578615 5_1:+10896315 None:intergenic
GCAATCCCTGTAGAGATAAG+TGG 0.578905 5_1:+10893728 None:intergenic
GCTCTGCCTCTAACTAAACC+TGG 0.580099 5_1:+10892249 None:intergenic
ATGCCATCCATTGCTCCTAA+CGG 0.581344 5_1:+10893307 None:intergenic
TCACCGCCTGAAGGTCCCTT+AGG 0.581612 5_1:+10896274 None:intergenic
CTGATTGAGAACAGTGCCCA+GGG 0.582372 5_1:-10896728 Msa0717190:CDS
GTCTGACTGATGATAGTGAA+AGG 0.583848 5_1:-10895757 Msa0717190:CDS
ACTACGTTTCATGATTGAAG+TGG 0.584103 5_1:+10892818 None:intergenic
ATCTCAATCTACAGCAGCAG+AGG 0.584635 5_1:-10892682 Msa0717190:CDS
GCAAACACGAGTTGGGGAGT+AGG 0.584654 5_1:-10892414 Msa0717190:CDS
CTTTGCCTGAGTGCAAGAGA+TGG 0.584656 5_1:-10896240 Msa0717190:CDS
TTGTCCTAAAGCGTATCATC+CGG 0.585341 5_1:-10897935 Msa0717190:CDS
TAGTGAAAGGATTCACGAGA+AGG 0.590332 5_1:-10895744 Msa0717190:CDS
GGTCCTTGAACCTTCCCAGA+TGG 0.590343 5_1:+10893656 None:intergenic
ACATTAACTTGATCTACTTG+CGG 0.590461 5_1:-10895796 Msa0717190:CDS
TCCTAAATATGCTAAACTGT+GGG 0.593025 5_1:-10894701 Msa0717190:intron
TCGGGATAGAGCAAGTGAGA+AGG 0.596969 5_1:-10894760 Msa0717190:CDS
AATAGGCTGTTGTTCCGCAA+TGG 0.597034 5_1:+10893494 None:intergenic
CCTGGTTCCCTACCATGACC+AGG 0.598011 5_1:+10892267 None:intergenic
CAGATAGTGAAGACAACTCA+GGG 0.598737 5_1:-10893100 Msa0717190:CDS
GTACGTATTCTTTGTGCAAG+GGG 0.599465 5_1:-10896826 Msa0717190:CDS
AGAAGTGTCTAGTGTTGCAG+TGG 0.601945 5_1:-10893762 Msa0717190:CDS
CTAATGGGATCCAAAATCAT+GGG 0.603693 5_1:+10892094 None:intergenic
TTTGCCTGAGTGCAAGAGAT+GGG 0.605036 5_1:-10896239 Msa0717190:CDS
CTGTATAAGTGGAATGCAAG+TGG 0.605595 5_1:-10893617 Msa0717190:CDS
ACAACTCGAACTATTTGTTG+AGG 0.605762 5_1:+10891794 None:intergenic
TAGTTGCATTGCATGCTGGA+GGG 0.605974 5_1:+10892943 None:intergenic
ACTTTCGGAGTTCCTTTCGC+CGG 0.606950 5_1:+10898256 None:intergenic
GACAAAGAAAGCAGTCAGGA+TGG 0.607040 5_1:-10893440 Msa0717190:CDS
AAGTTCACATACCTACAACT+TGG 0.607330 5_1:+10895654 None:intergenic
TGGATTGGAAAGTACACACC+TGG 0.609215 5_1:-10892463 Msa0717190:CDS
GAGGCAATGGAATCGCTTGG+TGG 0.610924 5_1:-10892852 Msa0717190:CDS
TGTAGTAACTCCAAGCTTTG+GGG 0.611671 5_1:-10892346 Msa0717190:CDS
CTCAGAAACATGAGCTGATG+TGG 0.613883 5_1:+10893016 None:intergenic
TAGAAGTGTGTACATGTGAC+TGG 0.616630 5_1:+10893282 None:intergenic
GTCAACTTTAGAATTTCTCG+AGG 0.616845 5_1:+10892602 None:intergenic
AAAGAAAGCAGTCAGGATGG+TGG 0.617264 5_1:-10893437 Msa0717190:CDS
CGAAATGCAAACACGAGTTG+GGG 0.617307 5_1:-10892420 Msa0717190:CDS
TCAGATAGTGAAGACAACTC+AGG 0.618147 5_1:-10893101 Msa0717190:CDS
CGTAGTGAGGAATTGACTGA+TGG 0.621062 5_1:-10892801 Msa0717190:CDS
GAGTTGGGGAGTAGGACATA+CGG 0.621523 5_1:-10892406 Msa0717190:CDS
AGAACATCACCACTTAAGCT+GGG 0.624830 5_1:-10892990 Msa0717190:CDS
GACTCAAACAGGACTTCTGG+TGG 0.627249 5_1:-10893158 Msa0717190:CDS
GAGAAATTCTAAAGTTGACG+TGG 0.629269 5_1:-10892598 Msa0717190:CDS
AACTTGCTTCGTCTCCGCCG+CGG 0.631018 5_1:+10898408 None:intergenic
GTGAACATGACGGAGAGAGA+CGG 0.631033 5_1:-10898358 Msa0717190:CDS
CTCCAGATCTCAAAGTATGG+AGG 0.636299 5_1:-10893586 Msa0717190:CDS
TTATCAGGATCCATCTGGGA+AGG 0.637004 5_1:-10893666 Msa0717190:CDS
AAGAATAAAATGAAAATTTG+GGG 0.637103 5_1:+10891868 None:intergenic
TTTCGATGACAAGAGCAGCT+GGG 0.637251 5_1:-10896503 Msa0717190:CDS
AGAAATTCTAAAGTTGACGT+GGG 0.639228 5_1:-10892597 Msa0717190:CDS
ATGGGATCCAAAATCATGGG+TGG 0.640005 5_1:+10892097 None:intergenic
TCCGCCGAAGCAGATCAAGA+AGG 0.640783 5_1:-10898227 Msa0717190:CDS
GTAGTTGCATTGCATGCTGG+AGG 0.641336 5_1:+10892942 None:intergenic
AGTTCCGGCGACAGTTCCGG+TGG 0.643876 5_1:-10898443 Msa0717190:CDS
TCAAAAGCCAAATGGAATTG+CGG 0.644100 5_1:-10897880 Msa0717190:intron
TTCAATCATGAAACGTAGTG+AGG 0.644665 5_1:-10892814 Msa0717190:CDS
ACACCCGTGTCACCGCCTGA+AGG 0.645434 5_1:+10896265 None:intergenic
TCATCATCAAAGAATATCAG+AGG 0.650447 5_1:-10892631 Msa0717190:CDS
ATGTGTTTCAAGTAACCAGT+GGG 0.650974 5_1:-10892562 Msa0717190:CDS
GAGTCAGATGGCAATAAACA+AGG 0.652111 5_1:-10894057 Msa0717190:intron
TCCATACTTTGAGATCTGGA+GGG 0.653191 5_1:+10893588 None:intergenic
TAGTAACTGTAAATCACATG+TGG 0.653829 5_1:+10892704 None:intergenic
AATCCGTTAGGAGCAATGGA+TGG 0.654526 5_1:-10893310 Msa0717190:CDS
ATTGAGTTGAGTTTGCGTGA+GGG 0.656214 5_1:+10898600 None:intergenic
TAGTTAGAGGCAGAGCTGCG+TGG 0.657531 5_1:-10892242 Msa0717190:CDS
AAAGTGAAAACCCTAACACA+TGG 0.657958 5_1:+10898630 None:intergenic
GAAGATGCTGGAGAGTCAGA+TGG 0.658657 5_1:-10894069 Msa0717190:CDS
GAAAGTACACACCTGGAATG+GGG 0.660607 5_1:-10892456 Msa0717190:CDS
GTGCGGATAAGAATCTCTAG+TGG 0.660680 5_1:-10895707 Msa0717190:CDS
TAATTGTGCAGGTACAAGCA+AGG 0.661666 5_1:-10895560 Msa0717190:intron
AATTGAGTTGAGTTTGCGTG+AGG 0.661978 5_1:+10898599 None:intergenic
TTCCAATCCAAGTCTCCAAG+TGG 0.667946 5_1:+10892476 None:intergenic
TGATGCTGTTGCAAATGGAA+AGG 0.670038 5_1:-10895942 Msa0717190:CDS
AAGCCTAAGGGACCTTCAGG+CGG 0.671021 5_1:-10896277 Msa0717190:CDS
TGCTGTTGCAAATGGAAAGG+AGG 0.671749 5_1:-10895939 Msa0717190:CDS
CATACAATGAATCCAAATTG+GGG 0.672918 5_1:+10894100 None:intergenic
AGTCATGCCCAATGTTGCAG+TGG 0.673187 5_1:+10892506 None:intergenic
TCATCTCGCTTGACACACGC+CGG 0.676664 5_1:+10897916 None:intergenic
TATGTGTTTCAAGTAACCAG+TGG 0.677699 5_1:-10892563 Msa0717190:CDS
GCTTTCAAAGAGATTGACTG+TGG 0.679086 5_1:-10895274 Msa0717190:intron
GGCCGTTACGGAGACCGCGG+CGG 0.679201 5_1:-10898422 Msa0717190:CDS
CCATTTCCAACACCAAATGG+CGG 0.680507 5_1:+10892210 None:intergenic
CACTCACGATTGGTTCAATG+TGG 0.681230 5_1:+10898843 None:intergenic
TGTTTCCGATGTGAACATGA+CGG 0.681488 5_1:-10898368 Msa0717190:CDS
TCTCTCCGTCATGTTCACAT+CGG 0.681784 5_1:+10898363 None:intergenic
AAGTGGGTACTGTAGGAAAG+GGG 0.681811 5_1:-10892136 Msa0717190:CDS
TCACACCAACAAATTAAGGG+AGG 0.689313 5_1:-10893222 Msa0717190:CDS
AAAGCAGTCAGGATGGTGGG+AGG 0.690722 5_1:-10893433 Msa0717190:CDS
GGTGGCCGTTACGGAGACCG+CGG 0.699489 5_1:-10898425 Msa0717190:CDS
AGTACACACCTGGAATGGGG+AGG 0.705466 5_1:-10892453 Msa0717190:CDS
CAGCATGCAATGCAACTACG+TGG 0.709858 5_1:-10892938 Msa0717190:CDS
TTCGAATCAGGAGTTCTCCG+AGG 0.712977 5_1:-10895443 Msa0717190:intron
AACATGACGGAGAGAGACGG+CGG 0.721172 5_1:-10898355 Msa0717190:CDS
GAGGTTATGAAGAAGAAGCG+CGG 0.742865 5_1:-10898283 Msa0717190:CDS
TGTCATCGCCGAGAACAGTG+AGG 0.750277 5_1:-10898302 Msa0717190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGAAATTTTAAATTTAAAC+CGG - chr5_1:10895178-10895197 Msa0717190:intron 10.0%
!! ATCAATAATCATGAATAATT+AGG + chr5_1:10892115-10892134 None:intergenic 15.0%
!!! TTTGAATATACATGATTTTT+AGG + chr5_1:10893366-10893385 None:intergenic 15.0%
!! ATGTATATTCAAACATAATT+TGG - chr5_1:10893373-10893392 Msa0717190:CDS 15.0%
!!! ATTTTCTTTTATAAGAAAGT+GGG + chr5_1:10894673-10894692 None:intergenic 15.0%
!!! TATTTTCTTTTATAAGAAAG+TGG + chr5_1:10894674-10894693 None:intergenic 15.0%
!!! GTAAATTTTCTTTTTTTATC+TGG - chr5_1:10895553-10895572 Msa0717190:intron 15.0%
!! AAACTTTATGTTTCATTTAT+TGG + chr5_1:10896061-10896080 None:intergenic 15.0%
!!! CAATTTTTTAACAAAGAATT+AGG - chr5_1:10896332-10896351 Msa0717190:CDS 15.0%
!!! TTTGTAAATTTTATGAAAGT+GGG - chr5_1:10898518-10898537 Msa0717190:five_prime_UTR 15.0%
!! AAGAATAAAATGAAAATTTG+GGG + chr5_1:10898805-10898824 None:intergenic 15.0%
!! CAAGAATAAAATGAAAATTT+GGG + chr5_1:10898806-10898825 None:intergenic 15.0%
!! ACAAGAATAAAATGAAAATT+TGG + chr5_1:10898807-10898826 None:intergenic 15.0%
!!! GATAATTTTGGTAATTTTGT+GGG + chr5_1:10891976-10891995 None:intergenic 20.0%
!!! TGATAATTTTGGTAATTTTG+TGG + chr5_1:10891977-10891996 None:intergenic 20.0%
!! AATAAAAAAATCGAATCGAA+TGG + chr5_1:10892162-10892181 None:intergenic 20.0%
!!! CGATTCGATTTTTTTATTTA+TGG - chr5_1:10892164-10892183 Msa0717190:CDS 20.0%
!!! AGAATGGAATAATTTTGAAT+TGG - chr5_1:10892549-10892568 Msa0717190:CDS 20.0%
!! TTATAGATTCTATCTTAGAT+TGG - chr5_1:10892604-10892623 Msa0717190:CDS 20.0%
!! ATTAAACCTAAAGAACAAAA+CGG + chr5_1:10892836-10892855 None:intergenic 20.0%
!! AGTAATTATTTACATGCAAT+TGG - chr5_1:10892876-10892895 Msa0717190:CDS 20.0%
!!! ATTTTATTTGTGATATTGCT+TGG - chr5_1:10892899-10892918 Msa0717190:CDS 20.0%
!!! ATTTTGTGTATAATAATGAC+CGG - chr5_1:10893157-10893176 Msa0717190:CDS 20.0%
!!! GTCTATTTTTGAAAAAATTG+TGG - chr5_1:10893407-10893426 Msa0717190:CDS 20.0%
!! GTTATTCATTAATCATCTAT+TGG - chr5_1:10893493-10893512 Msa0717190:CDS 20.0%
!!! TTTTCTTTTATAAGAAAGTG+GGG + chr5_1:10894672-10894691 None:intergenic 20.0%
!!! AATTTTAAATTTAAACCGGA+AGG - chr5_1:10895182-10895201 Msa0717190:intron 20.0%
!! AATATATTTATCCTATGTTC+AGG - chr5_1:10895336-10895355 Msa0717190:intron 20.0%
!!! ATTTTGTATGAGGTTTATAA+TGG - chr5_1:10895459-10895478 Msa0717190:CDS 20.0%
!!! AATGCCTCTTTTTTTTTTTT+TGG - chr5_1:10895819-10895838 Msa0717190:CDS 20.0%
!! AATAACTACATCAATAAAAG+AGG + chr5_1:10895860-10895879 None:intergenic 20.0%
!!! TCTTTTATTGATGTAGTTAT+TGG - chr5_1:10895859-10895878 Msa0717190:CDS 20.0%
!! ATATTTAGGAAAGAAGTAAA+TGG + chr5_1:10895959-10895978 None:intergenic 20.0%
!! ATTAAGCAGAAATAAATTAG+AGG + chr5_1:10896276-10896295 None:intergenic 20.0%
!!! GCAAGAAATAAATTTTAACA+TGG - chr5_1:10896362-10896381 Msa0717190:CDS 20.0%
!! CATATACATAATCATAGTTA+CGG + chr5_1:10896710-10896729 None:intergenic 20.0%
!! TCATTCATAAAATCATCAAA+TGG + chr5_1:10896972-10896991 None:intergenic 20.0%
!!! ATTTTATGAATGATAGATCA+TGG - chr5_1:10896979-10896998 Msa0717190:intron 20.0%
!!! GTTTGTAAATTTTATGAAAG+TGG - chr5_1:10898517-10898536 Msa0717190:five_prime_UTR 20.0%
!! AAAAAAAAACCAGTACTAAT+TGG + chr5_1:10898834-10898853 None:intergenic 20.0%
!!! AATTAGTACTGGTTTTTTTT+TGG - chr5_1:10898833-10898852 Msa0717190:five_prime_UTR 20.0%
! TATTAAATGAATCAGCAAAG+TGG + chr5_1:10893072-10893091 None:intergenic 25.0%
!! GCTGATTCATTTAATAACTA+AGG - chr5_1:10893076-10893095 Msa0717190:CDS 25.0%
! AGCATATGGTTAAATTAGTT+CGG - chr5_1:10893184-10893203 Msa0717190:CDS 25.0%
! ATGGTCACTTAAATCTAAAA+AGG - chr5_1:10893210-10893229 Msa0717190:CDS 25.0%
! AAATCGTTGTTAATTGTGTT+TGG + chr5_1:10893259-10893278 None:intergenic 25.0%
! AAACATACACTTGAAAATCA+TGG + chr5_1:10893295-10893314 None:intergenic 25.0%
! GTTAACACAATTCAAATATG+TGG + chr5_1:10893529-10893548 None:intergenic 25.0%
! GTGATAGATTTCTCAAAATA+AGG + chr5_1:10893681-10893700 None:intergenic 25.0%
! GCAAAAAGAAAGTCTATTAA+AGG + chr5_1:10893761-10893780 None:intergenic 25.0%
! ACATGTATAGCACATATAAT+GGG + chr5_1:10893826-10893845 None:intergenic 25.0%
! TACATGTATAGCACATATAA+TGG + chr5_1:10893827-10893846 None:intergenic 25.0%
! GTTTCTGTTAGAGAAAATAA+AGG - chr5_1:10893888-10893907 Msa0717190:CDS 25.0%
!! TTTAAGATGGTAAAGTTTGT+GGG + chr5_1:10894307-10894326 None:intergenic 25.0%
! TACCATCTTAAAGATGAAAA+AGG - chr5_1:10894315-10894334 Msa0717190:intron 25.0%
!!! AACCTTTTTCATCTTTAAGA+TGG + chr5_1:10894320-10894339 None:intergenic 25.0%
! ATTTGATTCTATATCTACAC+AGG + chr5_1:10894358-10894377 None:intergenic 25.0%
! TTTGTCTCACATATGAAAAA+TGG - chr5_1:10894474-10894493 Msa0717190:intron 25.0%
!! TCTAGACTAGTAAATTTGTT+TGG - chr5_1:10894603-10894622 Msa0717190:intron 25.0%
!!! TATGCATCTTGATTATTTTG+TGG + chr5_1:10894834-10894853 None:intergenic 25.0%
! AAGTAATTTCCTATTTACCT+CGG + chr5_1:10895247-10895266 None:intergenic 25.0%
! ACAAAATATAGCATACTTCA+TGG + chr5_1:10895446-10895465 None:intergenic 25.0%
!! AGTATGCTATATTTTGTATG+AGG - chr5_1:10895449-10895468 Msa0717190:CDS 25.0%
! TGGTTTAGTAATCTGATTTA+CGG - chr5_1:10895573-10895592 Msa0717190:intron 25.0%
! AGCATGGCATTAAATTATTT+AGG + chr5_1:10895678-10895697 None:intergenic 25.0%
! TAAGTAACATTTCAAAAGCA+TGG + chr5_1:10895694-10895713 None:intergenic 25.0%
! TCCACCAAAAAAAAAAAAAG+AGG + chr5_1:10895826-10895845 None:intergenic 25.0%
! AATGAATGAATAAGCAGAAA+AGG + chr5_1:10896443-10896462 None:intergenic 25.0%
! TCATACAATGAATCCAAATT+GGG + chr5_1:10896574-10896593 None:intergenic 25.0%
! TATGATTATGTATATGCAGA+TGG - chr5_1:10896714-10896733 Msa0717190:intron 25.0%
!! GAAAAAAACTCTGAAGATAA+TGG - chr5_1:10897482-10897501 Msa0717190:intron 25.0%
!!! TGGAAGAAGTATTTACATTA+TGG + chr5_1:10897622-10897641 None:intergenic 25.0%
! CCAGGTTAAATTACAATAAT+TGG + chr5_1:10898655-10898674 None:intergenic 25.0%
! CCAATTATTGTAATTTAACC+TGG - chr5_1:10898652-10898671 Msa0717190:five_prime_UTR 25.0%
ATTTCCATTTCCATGTGTTA+GGG - chr5_1:10892030-10892049 Msa0717190:three_prime_UTR 30.0%
ATTTATGGAACAATCAAAGC+CGG - chr5_1:10892179-10892198 Msa0717190:CDS 30.0%
!!! TTCTATCTTAGATTGGCTTT+TGG - chr5_1:10892611-10892630 Msa0717190:CDS 30.0%
! TTCTCTCTCTTTTCATTTCT+AGG - chr5_1:10892710-10892729 Msa0717190:CDS 30.0%
! TCTCTCTCTTTTCATTTCTA+GGG - chr5_1:10892711-10892730 Msa0717190:CDS 30.0%
!!! AATTCCATTTGGCTTTTGAA+CGG + chr5_1:10892789-10892808 None:intergenic 30.0%
!! CTTAAACCGTTTTGTTCTTT+AGG - chr5_1:10892827-10892846 Msa0717190:CDS 30.0%
TGTTTGTAATAGTGACACAA+GGG + chr5_1:10893044-10893063 None:intergenic 30.0%
TTGTTTGTAATAGTGACACA+AGG + chr5_1:10893045-10893064 None:intergenic 30.0%
! CATTTAATAACTAAGGTACC+TGG - chr5_1:10893083-10893102 Msa0717190:CDS 30.0%
TCTGATATGTATTATAGACC+AGG + chr5_1:10893104-10893123 None:intergenic 30.0%
ATATGGTTAAATTAGTTCGG+TGG - chr5_1:10893187-10893206 Msa0717190:CDS 30.0%
CACTTAAATCTAAAAAGGTG+CGG - chr5_1:10893215-10893234 Msa0717190:CDS 30.0%
CACTTGAAAATCATGGTTAA+TGG + chr5_1:10893288-10893307 None:intergenic 30.0%
! GCTAATGATGTTTAAAGTTG+TGG - chr5_1:10893429-10893448 Msa0717190:CDS 30.0%
CTAATCGGCAAATTAACAAA+TGG + chr5_1:10893646-10893665 None:intergenic 30.0%
TAAAGGAAAGCTACACAATT+TGG + chr5_1:10893744-10893763 None:intergenic 30.0%
AGAGAAAATAAAGGTTTGTG+TGG - chr5_1:10893897-10893916 Msa0717190:CDS 30.0%
GCAAATGAAATGATACATGA+TGG - chr5_1:10894101-10894120 Msa0717190:CDS 30.0%
!! AGTATCTTTTCAAGGTGTAT+TGG - chr5_1:10894190-10894209 Msa0717190:intron 30.0%
!! CTTTAAGATGGTAAAGTTTG+TGG + chr5_1:10894308-10894327 None:intergenic 30.0%
CTTAAAGATGAAAAAGGTTC+TGG - chr5_1:10894321-10894340 Msa0717190:intron 30.0%
TTTGAAAAACAAGAAGCCTA+AGG - chr5_1:10894380-10894399 Msa0717190:intron 30.0%
TTGAAAAACAAGAAGCCTAA+GGG - chr5_1:10894381-10894400 Msa0717190:intron 30.0%
CAATTAGAGATTTCTGTTGA+GGG + chr5_1:10894575-10894594 None:intergenic 30.0%
ACAATTAGAGATTTCTGTTG+AGG + chr5_1:10894576-10894595 None:intergenic 30.0%
! TCCAAAATTATTTTCTGCAG+GGG + chr5_1:10894697-10894716 None:intergenic 30.0%
! CTCCAAAATTATTTTCTGCA+GGG + chr5_1:10894698-10894717 None:intergenic 30.0%
TAAGAGATGCACAAGTAAAA+AGG - chr5_1:10894794-10894813 Msa0717190:CDS 30.0%
! ACATTAACTTGATCTACTTG+CGG - chr5_1:10894874-10894893 Msa0717190:intron 30.0%
CAATGTGTAAAAATTCACTG+AGG + chr5_1:10895057-10895076 None:intergenic 30.0%
!! TCACGTCTTGAAATTAGTTT+TGG - chr5_1:10895083-10895102 Msa0717190:intron 30.0%
TTTAAATTTAAACCGGAAGG+AGG - chr5_1:10895185-10895204 Msa0717190:intron 30.0%
TTGCGTCAAAGTATAAAGTA+TGG - chr5_1:10895373-10895392 Msa0717190:intron 30.0%
TGCGTCAAAGTATAAAGTAT+GGG - chr5_1:10895374-10895393 Msa0717190:intron 30.0%
AATTCAATTCAGATGGCATT+TGG + chr5_1:10895724-10895743 None:intergenic 30.0%
TCTCACAAATTCAATTCAGA+TGG + chr5_1:10895731-10895750 None:intergenic 30.0%
!!! GCCTCTTTTTTTTTTTTTGG+TGG - chr5_1:10895822-10895841 Msa0717190:CDS 30.0%
AATTGCGGCTTAATAATCTT+CGG - chr5_1:10895891-10895910 Msa0717190:CDS 30.0%
AGGAAAGAAGTAAATGGTAA+AGG + chr5_1:10895953-10895972 None:intergenic 30.0%
TTCCTAAATATGCTAAACTG+TGG - chr5_1:10895968-10895987 Msa0717190:CDS 30.0%
TCCTAAATATGCTAAACTGT+GGG - chr5_1:10895969-10895988 Msa0717190:CDS 30.0%
AAAGAATAACCAGCAAAAAG+GGG + chr5_1:10896187-10896206 None:intergenic 30.0%
GAAAGAATAACCAGCAAAAA+GGG + chr5_1:10896188-10896207 None:intergenic 30.0%
AGAAAGAATAACCAGCAAAA+AGG + chr5_1:10896189-10896208 None:intergenic 30.0%
AAATAAATTAGAGGACAGCA+CGG + chr5_1:10896267-10896286 None:intergenic 30.0%
ATATGTTCACAGCAATAAGT+GGG - chr5_1:10896385-10896404 Msa0717190:CDS 30.0%
CATACAATGAATCCAAATTG+GGG + chr5_1:10896573-10896592 None:intergenic 30.0%
CTCATACAATGAATCCAAAT+TGG + chr5_1:10896575-10896594 None:intergenic 30.0%
AAACTTGAAAACAAACTCAG+TGG + chr5_1:10896654-10896673 None:intergenic 30.0%
! TACCTATTTTCTCCAGAATT+TGG - chr5_1:10896742-10896761 Msa0717190:CDS 30.0%
! ACCTATTTTCTCCAGAATTT+GGG - chr5_1:10896743-10896762 Msa0717190:CDS 30.0%
GTAAGCATGTATTCTCAATT+GGG + chr5_1:10896824-10896843 None:intergenic 30.0%
AGTAAGCATGTATTCTCAAT+TGG + chr5_1:10896825-10896844 None:intergenic 30.0%
TTGTTAACTGATGCACTTAA+TGG - chr5_1:10897134-10897153 Msa0717190:intron 30.0%
TGTTAACTGATGCACTTAAT+GGG - chr5_1:10897135-10897154 Msa0717190:intron 30.0%
TTCATCTTTACCATTAGACT+GGG + chr5_1:10897342-10897361 None:intergenic 30.0%
ATTCATCTTTACCATTAGAC+TGG + chr5_1:10897343-10897362 None:intergenic 30.0%
CTCATTCAAATTCTCAGAAA+AGG + chr5_1:10897426-10897445 None:intergenic 30.0%
AGAATCACACCAACAAATTA+AGG - chr5_1:10897444-10897463 Msa0717190:intron 30.0%
GAATCACACCAACAAATTAA+GGG - chr5_1:10897445-10897464 Msa0717190:intron 30.0%
AAATACTTCTTCCAATTGCT+TGG - chr5_1:10897628-10897647 Msa0717190:intron 30.0%
! ACTGATTCATCAAAATCATC+TGG + chr5_1:10897776-10897795 None:intergenic 30.0%
! TGAATCAGTTTCAGATCTTT+TGG - chr5_1:10897787-10897806 Msa0717190:intron 30.0%
TAGTAACTGTAAATCACATG+TGG + chr5_1:10897969-10897988 None:intergenic 30.0%
TCATCATCAAAGAATATCAG+AGG - chr5_1:10898039-10898058 Msa0717190:intron 30.0%
!! AGAAATTCTAAAGTTGACGT+GGG - chr5_1:10898073-10898092 Msa0717190:intron 30.0%
CGGATTACAAAAATCAAATG+CGG + chr5_1:10898608-10898627 None:intergenic 30.0%
AATGAGCAATCACATAAAAC+AGG + chr5_1:10898730-10898749 None:intergenic 30.0%
AAAAAGGAGTAATTAGAGGG+AGG - chr5_1:10891802-10891821 Msa0717190:three_prime_UTR 35.0%
GAAAGTAGAGAGAGAATATG+TGG + chr5_1:10891919-10891938 None:intergenic 35.0%
AAGAGATCTCTATCAAGCTA+GGG + chr5_1:10891945-10891964 None:intergenic 35.0%
! GGAGCTGTTTGTGATAATTT+TGG + chr5_1:10891988-10892007 None:intergenic 35.0%
CTAACACATGGAAATGGAAA+TGG + chr5_1:10892031-10892050 None:intergenic 35.0%
CATTTCCATTTCCATGTGTT+AGG - chr5_1:10892029-10892048 Msa0717190:three_prime_UTR 35.0%
AAAACCCTAACACATGGAAA+TGG + chr5_1:10892037-10892056 None:intergenic 35.0%
AAAGTGAAAACCCTAACACA+TGG + chr5_1:10892043-10892062 None:intergenic 35.0%
!! CTCTCTCTTTTCATTTCTAG+GGG - chr5_1:10892712-10892731 Msa0717190:CDS 35.0%
TCAAAAGCCAAATGGAATTG+CGG - chr5_1:10892790-10892809 Msa0717190:CDS 35.0%
CAAAATACCGCAATTCCATT+TGG + chr5_1:10892800-10892819 None:intergenic 35.0%
TTGTGTATAATAATGACCGG+AGG - chr5_1:10893160-10893179 Msa0717190:CDS 35.0%
TGTGTATAATAATGACCGGA+GGG - chr5_1:10893161-10893180 Msa0717190:CDS 35.0%
TCGTTGTTAATTGTGTTTGG+TGG + chr5_1:10893256-10893275 None:intergenic 35.0%
AAGTTGTGGTTAATTGTGCT+TGG - chr5_1:10893443-10893462 Msa0717190:CDS 35.0%
GGTTAATTGTGCTTGGTAAA+TGG - chr5_1:10893450-10893469 Msa0717190:CDS 35.0%
ATGTACGTATTCTTTGTGCA+AGG - chr5_1:10893842-10893861 Msa0717190:CDS 35.0%
TGTACGTATTCTTTGTGCAA+GGG - chr5_1:10893843-10893862 Msa0717190:CDS 35.0%
! CAAGGGGTGTATAAAAAATG+CGG - chr5_1:10893860-10893879 Msa0717190:CDS 35.0%
! TACCATTTCCTTATTTCCCT+GGG + chr5_1:10893961-10893980 None:intergenic 35.0%
! ATACCATTTCCTTATTTCCC+TGG + chr5_1:10893962-10893981 None:intergenic 35.0%
TTATAAGAAAGTGGGGTTCA+AGG + chr5_1:10894665-10894684 None:intergenic 35.0%
! ACCCCTGCAGAAAATAATTT+TGG - chr5_1:10894693-10894712 Msa0717190:intron 35.0%
! GCTCCAAAATTATTTTCTGC+AGG + chr5_1:10894699-10894718 None:intergenic 35.0%
!!! GCAGAAAATAATTTTGGAGC+AGG - chr5_1:10894699-10894718 Msa0717190:intron 35.0%
ATTAGTGATGCTGTTGCAAA+TGG - chr5_1:10894723-10894742 Msa0717190:CDS 35.0%
!! TCTTGATTATTTTGTGGCAC+AGG + chr5_1:10894828-10894847 None:intergenic 35.0%
TATAGACTTGTCCAAGTTGT+AGG - chr5_1:10895005-10895024 Msa0717190:intron 35.0%
AAGTTCACATACCTACAACT+TGG + chr5_1:10895019-10895038 None:intergenic 35.0%
! ATTCACTGAGGTATTAGATG+TGG + chr5_1:10895045-10895064 None:intergenic 35.0%
!! GTTTTGGTAACTAATTGTGC+AGG - chr5_1:10895099-10895118 Msa0717190:intron 35.0%
GTTGCTGAACCTTACAAAAT+TGG - chr5_1:10895132-10895151 Msa0717190:intron 35.0%
! GTTCTTGTGCCAATTTTGTA+AGG + chr5_1:10895144-10895163 None:intergenic 35.0%
! CGAGTCTTCATATTTTGTAG+AGG - chr5_1:10895278-10895297 Msa0717190:CDS 35.0%
! TAATGGCTGTCTTTGTTTGT+AGG - chr5_1:10895476-10895495 Msa0717190:CDS 35.0%
! AATGGCTGTCTTTGTTTGTA+GGG - chr5_1:10895477-10895496 Msa0717190:CDS 35.0%
TATTGGAAGCTGAGAAATTG+CGG - chr5_1:10895876-10895895 Msa0717190:CDS 35.0%
ATTGCGGCTTAATAATCTTC+GGG - chr5_1:10895892-10895911 Msa0717190:CDS 35.0%
ACCCACAGTTTAGCATATTT+AGG + chr5_1:10895973-10895992 None:intergenic 35.0%
!! GGGTACTGAATAATGCATAT+TGG - chr5_1:10895989-10896008 Msa0717190:CDS 35.0%
CTATCATAGGAAAACTGTGT+AGG - chr5_1:10896124-10896143 Msa0717190:CDS 35.0%
!! TATTTTTACCCCCTTTTTGC+TGG - chr5_1:10896175-10896194 Msa0717190:CDS 35.0%
AAGAATAACCAGCAAAAAGG+GGG + chr5_1:10896186-10896205 None:intergenic 35.0%
GATATGTTCACAGCAATAAG+TGG - chr5_1:10896384-10896403 Msa0717190:CDS 35.0%
CATTCTTTAAGCGTGCAATT+TGG + chr5_1:10896472-10896491 None:intergenic 35.0%
! TCCCAAATTCTGGAGAAAAT+AGG + chr5_1:10896747-10896766 None:intergenic 35.0%
! ATTTTCTCCAGAATTTGGGA+TGG - chr5_1:10896747-10896766 Msa0717190:CDS 35.0%
CATCAATAGGAGTTTCGTTT+GGG + chr5_1:10896863-10896882 None:intergenic 35.0%
TCATCAATAGGAGTTTCGTT+TGG + chr5_1:10896864-10896883 None:intergenic 35.0%
ACATCAGCACTATCATCAAT+AGG + chr5_1:10896876-10896895 None:intergenic 35.0%
TGATAGATCATGGCATTATC+AGG - chr5_1:10896989-10897008 Msa0717190:intron 35.0%
TACAGCTGCAACATAGAAAA+AGG + chr5_1:10897038-10897057 None:intergenic 35.0%
TTTGTCATCCAATGCAACAT+TGG + chr5_1:10897216-10897235 None:intergenic 35.0%
CTCTGATCTGTTCTATGATT+CGG + chr5_1:10897295-10897314 None:intergenic 35.0%
ACAGATCAGAGAACAAAAAG+TGG - chr5_1:10897304-10897323 Msa0717190:intron 35.0%
ATGGTAAAGATGAATCCGTT+AGG - chr5_1:10897348-10897367 Msa0717190:intron 35.0%
AAATTCTCAGAAAAGGCAGT+TGG + chr5_1:10897419-10897438 None:intergenic 35.0%
!! ATGATCCTCCCTTAATTTGT+TGG + chr5_1:10897456-10897475 None:intergenic 35.0%
AACAAATTAAGGGAGGATCA+TGG - chr5_1:10897455-10897474 Msa0717190:intron 35.0%
ACAAATTAAGGGAGGATCAT+GGG - chr5_1:10897456-10897475 Msa0717190:intron 35.0%
ATGGAAATCATGACTCAAAC+AGG - chr5_1:10897501-10897520 Msa0717190:intron 35.0%
AAATCAAATCCCAGCTTAAG+TGG + chr5_1:10897692-10897711 None:intergenic 35.0%
CTACGTTTCATGATTGAAGT+GGG + chr5_1:10897854-10897873 None:intergenic 35.0%
ACTACGTTTCATGATTGAAG+TGG + chr5_1:10897855-10897874 None:intergenic 35.0%
TTCAATCATGAAACGTAGTG+AGG - chr5_1:10897856-10897875 Msa0717190:intron 35.0%
!! TTGACATCTGCTTGTTGTAA+CGG + chr5_1:10898016-10898035 None:intergenic 35.0%
!! GTCAACTTTAGAATTTCTCG+AGG + chr5_1:10898071-10898090 None:intergenic 35.0%
!! GAGAAATTCTAAAGTTGACG+TGG - chr5_1:10898072-10898091 Msa0717190:intron 35.0%
! TATGTGTTTCAAGTAACCAG+TGG - chr5_1:10898107-10898126 Msa0717190:intron 35.0%
! ATGTGTTTCAAGTAACCAGT+GGG - chr5_1:10898108-10898127 Msa0717190:intron 35.0%
! TTTATGAAAGTGGGTACTGT+AGG - chr5_1:10898527-10898546 Msa0717190:five_prime_UTR 35.0%
! AATACTTCCACCCATGATTT+TGG - chr5_1:10898566-10898585 Msa0717190:five_prime_UTR 35.0%
CTAATGGGATCCAAAATCAT+GGG + chr5_1:10898579-10898598 None:intergenic 35.0%
! ATTTTGGATCCCATTAGCAT+TGG - chr5_1:10898582-10898601 Msa0717190:five_prime_UTR 35.0%
ATCCGTAACATATCTGTAGT+TGG - chr5_1:10898623-10898642 Msa0717190:five_prime_UTR 35.0%
AGCCAACTACAGATATGTTA+CGG + chr5_1:10898628-10898647 None:intergenic 35.0%
! ATGAAAATTTGGGGTCAGAA+AGG + chr5_1:10898796-10898815 None:intergenic 35.0%
CTTGTGTTACCAATTAGTAC+TGG - chr5_1:10898822-10898841 Msa0717190:five_prime_UTR 35.0%
TACTATTGCTCACTCACGAT+TGG + chr5_1:10891840-10891859 None:intergenic 40.0%
AATCGTGAGTGAGCAATAGT+AGG - chr5_1:10891839-10891858 Msa0717190:three_prime_UTR 40.0%
GAAGAGATCTCTATCAAGCT+AGG + chr5_1:10891946-10891965 None:intergenic 40.0%
! CATGGAAATGGAAATGGACT+GGG + chr5_1:10892025-10892044 None:intergenic 40.0%
ACATGGAAATGGAAATGGAC+TGG + chr5_1:10892026-10892045 None:intergenic 40.0%
!! ATTGAGTTGAGTTTGCGTGA+GGG + chr5_1:10892073-10892092 None:intergenic 40.0%
!! AATTGAGTTGAGTTTGCGTG+AGG + chr5_1:10892074-10892093 None:intergenic 40.0%
TGTTTCCGATGTGAACATGA+CGG - chr5_1:10892302-10892321 Msa0717190:CDS 40.0%
ATGACAGCGAGAACTACTTT+CGG + chr5_1:10892354-10892373 None:intergenic 40.0%
CTTCATAACCTCACTGTTCT+CGG + chr5_1:10892379-10892398 None:intergenic 40.0%
TCTTCCTTCTTGATCTGCTT+CGG + chr5_1:10892450-10892469 None:intergenic 40.0%
GTTTGCTTCATTTGCTTCGA+CGG - chr5_1:10892477-10892496 Msa0717190:CDS 40.0%
GAGGGTTTAGCGATTAAGAA+TGG - chr5_1:10892533-10892552 Msa0717190:CDS 40.0%
TTGTCCTAAAGCGTATCATC+CGG - chr5_1:10892735-10892754 Msa0717190:CDS 40.0%
TCTTCCGTTCAAAAGCCAAA+TGG - chr5_1:10892782-10892801 Msa0717190:CDS 40.0%
ATTTAACCATATGCTCCCTC+CGG + chr5_1:10893179-10893198 None:intergenic 40.0%
! GGTTAAATTAGTTCGGTGGA+TGG - chr5_1:10893191-10893210 Msa0717190:CDS 40.0%
AGGAATGAGTGAGTGCTAAT+CGG + chr5_1:10893661-10893680 None:intergenic 40.0%
GTACGTATTCTTTGTGCAAG+GGG - chr5_1:10893844-10893863 Msa0717190:CDS 40.0%
TCATGTGTACCAAGACTGAA+GGG - chr5_1:10894064-10894083 Msa0717190:CDS 40.0%
!!! TCAATGGGTTTTTAGCTCGA+AGG + chr5_1:10894257-10894276 None:intergenic 40.0%
TTGTGGGAAGTTTGAACCAT+AGG + chr5_1:10894291-10894310 None:intergenic 40.0%
TTGTTTGGAAAAGCTCGTCT+TGG - chr5_1:10894618-10894637 Msa0717190:intron 40.0%
TGATGCTGTTGCAAATGGAA+AGG - chr5_1:10894728-10894747 Msa0717190:CDS 40.0%
! GTCTGACTGATGATAGTGAA+AGG - chr5_1:10894913-10894932 Msa0717190:intron 40.0%
TAGTGAAAGGATTCACGAGA+AGG - chr5_1:10894926-10894945 Msa0717190:intron 40.0%
!!! AGGTTGTTGGTTCTTTTGTG+CGG - chr5_1:10894946-10894965 Msa0717190:intron 40.0%
TAATTGTGCAGGTACAAGCA+AGG - chr5_1:10895110-10895129 Msa0717190:intron 40.0%
GATAGACGAGATTTCGAATC+AGG - chr5_1:10895215-10895234 Msa0717190:intron 40.0%
TAATCATCTGCAAACTCCCA+TGG + chr5_1:10895317-10895336 None:intergenic 40.0%
CTTGCATTCATCCTGAACAT+AGG + chr5_1:10895350-10895369 None:intergenic 40.0%
GCTTTCAAAGAGATTGACTG+TGG - chr5_1:10895396-10895415 Msa0717190:intron 40.0%
TTAAGCGTGCAATTTGGTCA+AGG + chr5_1:10896466-10896485 None:intergenic 40.0%
GCAGCTACTAAATTCTTCAG+AGG - chr5_1:10896504-10896523 Msa0717190:CDS 40.0%
TATGAGTCTGATGAAGATGC+TGG - chr5_1:10896589-10896608 Msa0717190:intron 40.0%
GAGTCAGATGGCAATAAACA+AGG - chr5_1:10896613-10896632 Msa0717190:intron 40.0%
CTTGAAAACAAACTCAGTGG+AGG + chr5_1:10896651-10896670 None:intergenic 40.0%
! ATTTGGGATGGTGTCTTGAA+TGG - chr5_1:10896759-10896778 Msa0717190:CDS 40.0%
ATGGTGTCTTGAATGGTGTT+GGG - chr5_1:10896766-10896785 Msa0717190:CDS 40.0%
TGTATTCTCAATTGGGTCAC+TGG + chr5_1:10896817-10896836 None:intergenic 40.0%
TCATCTCCACTTATCTCTAC+AGG - chr5_1:10896936-10896955 Msa0717190:intron 40.0%
CATCTCCACTTATCTCTACA+GGG - chr5_1:10896937-10896956 Msa0717190:intron 40.0%
CTATGTTGCAGCTGTATAAG+TGG - chr5_1:10897042-10897061 Msa0717190:intron 40.0%
CTGTATAAGTGGAATGCAAG+TGG - chr5_1:10897053-10897072 Msa0717190:intron 40.0%
!! TCCATACTTTGAGATCTGGA+GGG + chr5_1:10897085-10897104 None:intergenic 40.0%
!! ATCCTCCATACTTTGAGATC+TGG + chr5_1:10897089-10897108 None:intergenic 40.0%
AACAGCCTATTGCTCTCTTT+AGG - chr5_1:10897188-10897207 Msa0717190:intron 40.0%
TTTAGGAGCCAATGTTGCAT+TGG - chr5_1:10897205-10897224 Msa0717190:intron 40.0%
! TAGAAGTGTGTACATGTGAC+TGG + chr5_1:10897391-10897410 None:intergenic 40.0%
TCACACCAACAAATTAAGGG+AGG - chr5_1:10897448-10897467 Msa0717190:intron 40.0%
TCAGATAGTGAAGACAACTC+AGG - chr5_1:10897569-10897588 Msa0717190:intron 40.0%
CAGATAGTGAAGACAACTCA+GGG - chr5_1:10897570-10897589 Msa0717190:intron 40.0%
TGATGTGGTATCCAAGCAAT+TGG + chr5_1:10897642-10897661 None:intergenic 40.0%
AAGAACATCACCACTTAAGC+TGG - chr5_1:10897679-10897698 Msa0717190:intron 40.0%
AGAACATCACCACTTAAGCT+GGG - chr5_1:10897680-10897699 Msa0717190:intron 40.0%
! TTCAGATCTTTTGGCAGAAG+TGG - chr5_1:10897796-10897815 Msa0717190:intron 40.0%
! CTTTTACCTGCATCAAGCAT+TGG + chr5_1:10897932-10897951 None:intergenic 40.0%
AACGAAATGCAAACACGAGT+TGG - chr5_1:10898248-10898267 Msa0717190:CDS 40.0%
ACGAAATGCAAACACGAGTT+GGG - chr5_1:10898249-10898268 Msa0717190:CDS 40.0%
TCTGTAGTAACTCCAAGCTT+TGG - chr5_1:10898322-10898341 Msa0717190:CDS 40.0%
CTGTAGTAACTCCAAGCTTT+GGG - chr5_1:10898323-10898342 Msa0717190:CDS 40.0%
TGTAGTAACTCCAAGCTTTG+GGG - chr5_1:10898324-10898343 Msa0717190:CDS 40.0%
GATCACTTCCGTATCTTGTT+TGG + chr5_1:10898354-10898373 None:intergenic 40.0%
! AAAGTGGGTACTGTAGGAAA+GGG - chr5_1:10898533-10898552 Msa0717190:five_prime_UTR 40.0%
GCTAATGGGATCCAAAATCA+TGG + chr5_1:10898580-10898599 None:intergenic 40.0%
! CACTCACGATTGGTTCAATG+TGG + chr5_1:10891830-10891849 None:intergenic 45.0%
GACTGGGTTCAGATGTAAGA+AGG + chr5_1:10892009-10892028 None:intergenic 45.0%
ACAATCAAAGCCGGAAACAC+CGG - chr5_1:10892188-10892207 Msa0717190:CDS 45.0%
TCTCTCCGTCATGTTCACAT+CGG + chr5_1:10892310-10892329 None:intergenic 45.0%
GAGGTTATGAAGAAGAAGCG+CGG - chr5_1:10892387-10892406 Msa0717190:CDS 45.0%
! ACTTTCTTTTTGCGCTGCTC+AGG - chr5_1:10893768-10893787 Msa0717190:CDS 45.0%
TGCCCAGGGAAATAAGGAAA+TGG - chr5_1:10893956-10893975 Msa0717190:intron 45.0%
CTCATGTGTACCAAGACTGA+AGG - chr5_1:10894063-10894082 Msa0717190:CDS 45.0%
CATGTGTACCAAGACTGAAG+GGG - chr5_1:10894065-10894084 Msa0717190:CDS 45.0%
ATCAAGTTCCCCTTCAGTCT+TGG + chr5_1:10894076-10894095 None:intergenic 45.0%
!!! GCTACTTTTACAGTGTGACG+TGG - chr5_1:10894143-10894162 Msa0717190:intron 45.0%
ATTTCGATGACAAGAGCAGC+TGG - chr5_1:10894166-10894185 Msa0717190:intron 45.0%
TTTCGATGACAAGAGCAGCT+GGG - chr5_1:10894167-10894186 Msa0717190:intron 45.0%
!!! CAGCTGGGAGTATCTTTTCA+AGG - chr5_1:10894182-10894201 Msa0717190:intron 45.0%
TTTGCCTGAGTGCAAGAGAT+GGG - chr5_1:10894431-10894450 Msa0717190:intron 45.0%
TGATGTCCAGAATCTCTTGC+TGG - chr5_1:10894521-10894540 Msa0717190:intron 45.0%
CATACTCCAGCAAGAGATTC+TGG + chr5_1:10894530-10894549 None:intergenic 45.0%
TGCTGTTGCAAATGGAAAGG+AGG - chr5_1:10894731-10894750 Msa0717190:CDS 45.0%
AGGATTCACGAGAAGGTTGT+TGG - chr5_1:10894933-10894952 Msa0717190:intron 45.0%
GTGCGGATAAGAATCTCTAG+TGG - chr5_1:10894963-10894982 Msa0717190:intron 45.0%
CTATCGATATGACCTCCTTC+CGG + chr5_1:10895200-10895219 None:intergenic 45.0%
AGGAGTTCTCCGAGGTAAAT+AGG - chr5_1:10895235-10895254 Msa0717190:intron 45.0%
AGGAGTCAAGTGTCTTCCAT+GGG - chr5_1:10895298-10895317 Msa0717190:CDS 45.0%
ATAGTAACACCCACGCATCT+AGG + chr5_1:10896108-10896127 None:intergenic 45.0%
!! TGCGTGGGTGTTACTATCAT+AGG - chr5_1:10896111-10896130 Msa0717190:CDS 45.0%
GTGGGTATGTGCATGTTAGT+TGG - chr5_1:10896403-10896422 Msa0717190:CDS 45.0%
TTGCACGCTTAAAGAATGCG+TGG - chr5_1:10896474-10896493 Msa0717190:CDS 45.0%
TGTACACTCTGACCCCAATT+TGG - chr5_1:10896558-10896577 Msa0717190:intron 45.0%
! ACGGTGATATAAGCACTGTC+AGG + chr5_1:10896691-10896710 None:intergenic 45.0%
CAAGACACCATCCCAAATTC+TGG + chr5_1:10896757-10896776 None:intergenic 45.0%
GATGGTGTCTTGAATGGTGT+TGG - chr5_1:10896765-10896784 Msa0717190:CDS 45.0%
! TGGTGTCTTGAATGGTGTTG+GGG - chr5_1:10896767-10896786 Msa0717190:CDS 45.0%
!! AGAAGTGTCTAGTGTTGCAG+TGG - chr5_1:10896908-10896927 Msa0717190:intron 45.0%
GCAATCCCTGTAGAGATAAG+TGG + chr5_1:10896945-10896964 None:intergenic 45.0%
TGGCATTATCAGGATCCATC+TGG - chr5_1:10896999-10897018 Msa0717190:intron 45.0%
GGCATTATCAGGATCCATCT+GGG - chr5_1:10897000-10897019 Msa0717190:intron 45.0%
TTATCAGGATCCATCTGGGA+AGG - chr5_1:10897004-10897023 Msa0717190:intron 45.0%
TCCCTCCAGATCTCAAAGTA+TGG - chr5_1:10897081-10897100 Msa0717190:intron 45.0%
!! CTCCATACTTTGAGATCTGG+AGG + chr5_1:10897086-10897105 None:intergenic 45.0%
CTCCAGATCTCAAAGTATGG+AGG - chr5_1:10897084-10897103 Msa0717190:intron 45.0%
! GCTCCAAAAATGTGCCATTG+CGG - chr5_1:10897162-10897181 Msa0717190:intron 45.0%
! GTTCCGCAATGGCACATTTT+TGG + chr5_1:10897168-10897187 None:intergenic 45.0%
AATAGGCTGTTGTTCCGCAA+TGG + chr5_1:10897179-10897198 None:intergenic 45.0%
TGGCTCCTAAAGAGAGCAAT+AGG + chr5_1:10897196-10897215 None:intergenic 45.0%
GGATGACAAAGAAAGCAGTC+AGG - chr5_1:10897226-10897245 Msa0717190:intron 45.0%
GACAAAGAAAGCAGTCAGGA+TGG - chr5_1:10897230-10897249 Msa0717190:intron 45.0%
AAAGAAAGCAGTCAGGATGG+TGG - chr5_1:10897233-10897252 Msa0717190:intron 45.0%
AAGAAAGCAGTCAGGATGGT+GGG - chr5_1:10897234-10897253 Msa0717190:intron 45.0%
GATACTTCGACCCAGTCTAA+TGG - chr5_1:10897329-10897348 Msa0717190:intron 45.0%
GATGAATCCGTTAGGAGCAA+TGG - chr5_1:10897356-10897375 Msa0717190:intron 45.0%
AATCCGTTAGGAGCAATGGA+TGG - chr5_1:10897360-10897379 Msa0717190:intron 45.0%
ATGCCATCCATTGCTCCTAA+CGG + chr5_1:10897366-10897385 None:intergenic 45.0%
CATGACTCAAACAGGACTTC+TGG - chr5_1:10897509-10897528 Msa0717190:intron 45.0%
TCTGGTGGTCAGAGTAATAG+TGG - chr5_1:10897527-10897546 Msa0717190:intron 45.0%
AGACAACTCAGGGCAATCTT+CGG - chr5_1:10897580-10897599 Msa0717190:intron 45.0%
CTCAGAAACATGAGCTGATG+TGG + chr5_1:10897657-10897676 None:intergenic 45.0%
TAGTTGCATTGCATGCTGGA+GGG + chr5_1:10897730-10897749 None:intergenic 45.0%
ACTACGTGGCAGGCTATTAT+AGG - chr5_1:10897746-10897765 Msa0717190:intron 45.0%
! AGATCTTTTGGCAGAAGTGG+AGG - chr5_1:10897799-10897818 Msa0717190:intron 45.0%
CGTAGTGAGGAATTGACTGA+TGG - chr5_1:10897869-10897888 Msa0717190:intron 45.0%
CTTAGTCCAATGCTTGATGC+AGG - chr5_1:10897923-10897942 Msa0717190:CDS 45.0%
ATCTCAATCTACAGCAGCAG+AGG - chr5_1:10897988-10898007 Msa0717190:intron 45.0%
! TTTTCCAGCCACTGCAACAT+TGG - chr5_1:10898156-10898175 Msa0717190:intron 45.0%
TTTCCAGCCACTGCAACATT+GGG - chr5_1:10898157-10898176 Msa0717190:intron 45.0%
TTCCAATCCAAGTCTCCAAG+TGG + chr5_1:10898197-10898216 None:intergenic 45.0%
! TGGATTGGAAAGTACACACC+TGG - chr5_1:10898207-10898226 Msa0717190:CDS 45.0%
! TGGAAAGTACACACCTGGAA+TGG - chr5_1:10898212-10898231 Msa0717190:CDS 45.0%
! GGAAAGTACACACCTGGAAT+GGG - chr5_1:10898213-10898232 Msa0717190:CDS 45.0%
! GAAAGTACACACCTGGAATG+GGG - chr5_1:10898214-10898233 Msa0717190:CDS 45.0%
CGAAATGCAAACACGAGTTG+GGG - chr5_1:10898250-10898269 Msa0717190:CDS 45.0%
GGGGATAGCCAAACAAGATA+CGG - chr5_1:10898343-10898362 Msa0717190:CDS 45.0%
! GATTTTCTGTGCCCAGAGAT+CGG - chr5_1:10898374-10898393 Msa0717190:CDS 45.0%
! ATTTTCTGTGCCCAGAGATC+GGG - chr5_1:10898375-10898394 Msa0717190:CDS 45.0%
AGGGAACCAGGTTTAGTTAG+AGG - chr5_1:10898415-10898434 Msa0717190:CDS 45.0%
CCATTTCCAACACCAAATGG+CGG + chr5_1:10898463-10898482 None:intergenic 45.0%
CCTCCATTTCCAACACCAAA+TGG + chr5_1:10898466-10898485 None:intergenic 45.0%
!! CCATTTGGTGTTGGAAATGG+AGG - chr5_1:10898463-10898482 Msa0717190:CDS 45.0%
TTACAAACTCGCTGCCCTTT+GGG + chr5_1:10898505-10898524 None:intergenic 45.0%
TTTACAAACTCGCTGCCCTT+TGG + chr5_1:10898506-10898525 None:intergenic 45.0%
! GAAAGTGGGTACTGTAGGAA+AGG - chr5_1:10898532-10898551 Msa0717190:five_prime_UTR 45.0%
! AAGTGGGTACTGTAGGAAAG+GGG - chr5_1:10898534-10898553 Msa0717190:five_prime_UTR 45.0%
!! TCATGGGTGGAAGTATTCAC+AGG + chr5_1:10898563-10898582 None:intergenic 45.0%
ATGGGATCCAAAATCATGGG+TGG + chr5_1:10898576-10898595 None:intergenic 45.0%
CAAATGCGGCCAATGCTAAT+GGG + chr5_1:10898594-10898613 None:intergenic 45.0%
TCAAATGCGGCCAATGCTAA+TGG + chr5_1:10898595-10898614 None:intergenic 45.0%
!!! TTAAAATTTAAAACAAATAT+AGG + chr5_1:10893703-10893722 None:intergenic 5.0%
!!! TAAATTTTAATAGTTTATTT+TGG - chr5_1:10893713-10893732 Msa0717190:CDS 5.0%
! GCAAGTTGAAGTTCCGACGA+AGG - chr5_1:10892278-10892297 Msa0717190:CDS 50.0%
ACATCGGAAACAGCCTTCGT+CGG + chr5_1:10892294-10892313 None:intergenic 50.0%
! GTGAACATGACGGAGAGAGA+CGG - chr5_1:10892312-10892331 Msa0717190:CDS 50.0%
ACTTTCGGAGTTCCTTTCGC+CGG + chr5_1:10892417-10892436 None:intergenic 50.0%
TCCTTCTTGATCTGCTTCGG+CGG + chr5_1:10892447-10892466 None:intergenic 50.0%
TGCTTCATTTGCTTCGACGG+TGG - chr5_1:10892480-10892499 Msa0717190:CDS 50.0%
ATCGCTAAACCCTCACTCAC+CGG + chr5_1:10892527-10892546 None:intergenic 50.0%
! TAATGACCGGAGGGAGCATA+TGG - chr5_1:10893170-10893189 Msa0717190:CDS 50.0%
! TCTTTTTGCGCTGCTCAGGT+TGG - chr5_1:10893772-10893791 Msa0717190:CDS 50.0%
CTGATTGAGAACAGTGCCCA+GGG - chr5_1:10893942-10893961 Msa0717190:intron 50.0%
GAACAGTGCCCAGGGAAATA+AGG - chr5_1:10893950-10893969 Msa0717190:intron 50.0%
AAGAAGCCTAAGGGACCTTC+AGG - chr5_1:10894390-10894409 Msa0717190:intron 50.0%
CTTTGCCTGAGTGCAAGAGA+TGG - chr5_1:10894430-10894449 Msa0717190:intron 50.0%
GTGCAAGAGATGGGCATCAA+AGG - chr5_1:10894440-10894459 Msa0717190:intron 50.0%
TTCGAATCAGGAGTTCTCCG+AGG - chr5_1:10895227-10895246 Msa0717190:intron 50.0%
GAGGAGTCAAGTGTCTTCCA+TGG - chr5_1:10895297-10895316 Msa0717190:CDS 50.0%
TCGGGATAGAGCAAGTGAGA+AGG - chr5_1:10895910-10895929 Msa0717190:CDS 50.0%
CGGGATAGAGCAAGTGAGAA+GGG - chr5_1:10895911-10895930 Msa0717190:CDS 50.0%
! ACGCATCTAGGCACTGCTAA+TGG + chr5_1:10896096-10896115 None:intergenic 50.0%
ATTAGCAGTGCCTAGATGCG+TGG - chr5_1:10896095-10896114 Msa0717190:CDS 50.0%
TTAGCAGTGCCTAGATGCGT+GGG - chr5_1:10896096-10896115 Msa0717190:CDS 50.0%
TTGGGGTCAGAGTGTACATC+TGG + chr5_1:10896556-10896575 None:intergenic 50.0%
GAAGATGCTGGAGAGTCAGA+TGG - chr5_1:10896601-10896620 Msa0717190:intron 50.0%
! GGTGTCTTGAATGGTGTTGG+GGG - chr5_1:10896768-10896787 Msa0717190:CDS 50.0%
! ATGGTGTTGGGGGAAGAACA+CGG - chr5_1:10896778-10896797 Msa0717190:CDS 50.0%
GATCCATCTGGGAAGGTTCA+AGG - chr5_1:10897011-10897030 Msa0717190:intron 50.0%
GACTCAAACAGGACTTCTGG+TGG - chr5_1:10897512-10897531 Msa0717190:intron 50.0%
AGTTGCATTGCATGCTGGAG+GGG + chr5_1:10897729-10897748 None:intergenic 50.0%
GTAGTTGCATTGCATGCTGG+AGG + chr5_1:10897731-10897750 None:intergenic 50.0%
CACGTAGTTGCATTGCATGC+TGG + chr5_1:10897734-10897753 None:intergenic 50.0%
CAGCATGCAATGCAACTACG+TGG - chr5_1:10897732-10897751 Msa0717190:intron 50.0%
ATGCAATGCAACTACGTGGC+AGG - chr5_1:10897736-10897755 Msa0717190:intron 50.0%
TTTGGCAGAAGTGGAGGCAA+TGG - chr5_1:10897805-10897824 Msa0717190:intron 50.0%
! AATGGAATCGCTTGGTGGCT+TGG - chr5_1:10897823-10897842 Msa0717190:intron 50.0%
TCAAGTAACCAGTGGGAGTC+AGG - chr5_1:10898115-10898134 Msa0717190:intron 50.0%
AGTCATGCCCAATGTTGCAG+TGG + chr5_1:10898167-10898186 None:intergenic 50.0%
GCATGACTGTAGACACCACT+TGG - chr5_1:10898179-10898198 Msa0717190:CDS 50.0%
GTAGACACCACTTGGAGACT+TGG - chr5_1:10898187-10898206 Msa0717190:CDS 50.0%
CACCACTTGGAGACTTGGAT+TGG - chr5_1:10898192-10898211 Msa0717190:CDS 50.0%
GAGTTGGGGAGTAGGACATA+CGG - chr5_1:10898264-10898283 Msa0717190:CDS 50.0%
GTTTGGCTATCCCCAAAGCT+TGG + chr5_1:10898337-10898356 None:intergenic 50.0%
! TTTTCTGTGCCCAGAGATCG+GGG - chr5_1:10898376-10898395 Msa0717190:CDS 50.0%
! GGGTTTTCCTGGTCATGGTA+GGG - chr5_1:10898396-10898415 Msa0717190:CDS 50.0%
GCTCTGCCTCTAACTAAACC+TGG + chr5_1:10898424-10898443 None:intergenic 50.0%
!! CCGCCATTTGGTGTTGGAAA+TGG - chr5_1:10898460-10898479 Msa0717190:CDS 50.0%
TCGTATAGACCTCTGCCCAA+AGG - chr5_1:10898487-10898506 Msa0717190:CDS 50.0%
CGTATAGACCTCTGCCCAAA+GGG - chr5_1:10898488-10898507 Msa0717190:CDS 50.0%
GACACTTGACTAGTACTGCC+AGG + chr5_1:10898673-10898692 None:intergenic 50.0%
GTTGCAGTTGCCGGTGTTTC+CGG + chr5_1:10892201-10892220 None:intergenic 55.0%
GGAAACACCGGCAACTGCAA+CGG - chr5_1:10892200-10892219 Msa0717190:CDS 55.0%
AACTGCAACGGCGACAGTTC+CGG - chr5_1:10892212-10892231 Msa0717190:CDS 55.0%
! AACATGACGGAGAGAGACGG+CGG - chr5_1:10892315-10892334 Msa0717190:CDS 55.0%
GAGAGACGGCGGTTGTTGTA+CGG - chr5_1:10892326-10892345 Msa0717190:CDS 55.0%
TGTCATCGCCGAGAACAGTG+AGG - chr5_1:10892368-10892387 Msa0717190:CDS 55.0%
! TTCGGCGGAGGAGCTACTTT+CGG + chr5_1:10892432-10892451 None:intergenic 55.0%
TTCTTGATCTGCTTCGGCGG+AGG + chr5_1:10892444-10892463 None:intergenic 55.0%
TCCGCCGAAGCAGATCAAGA+AGG - chr5_1:10892443-10892462 Msa0717190:CDS 55.0%
CACGCCGGATGATACGCTTT+AGG + chr5_1:10892742-10892761 None:intergenic 55.0%
TCATCTCGCTTGACACACGC+CGG + chr5_1:10892757-10892776 None:intergenic 55.0%
GCTGATTGAGAACAGTGCCC+AGG - chr5_1:10893941-10893960 Msa0717190:intron 55.0%
TAGGAGCAGCAGCGCTCAAT+GGG + chr5_1:10894272-10894291 None:intergenic 55.0%
ATAGGAGCAGCAGCGCTCAA+TGG + chr5_1:10894273-10894292 None:intergenic 55.0%
! ATTGAGCGCTGCTGCTCCTA+TGG - chr5_1:10894272-10894291 Msa0717190:intron 55.0%
AAGCCTAAGGGACCTTCAGG+CGG - chr5_1:10894393-10894412 Msa0717190:intron 55.0%
GATGCCCATCTCTTGCACTC+AGG + chr5_1:10894438-10894457 None:intergenic 55.0%
CTACTTGCGGCGAAGTCTGA+TGG - chr5_1:10894887-10894906 Msa0717190:intron 55.0%
! TGGTGTTGGGGGAAGAACAC+GGG - chr5_1:10896779-10896798 Msa0717190:CDS 55.0%
CTCAATTGGGTCACTGGCAG+TGG + chr5_1:10896811-10896830 None:intergenic 55.0%
GGTCCTTGAACCTTCCCAGA+TGG + chr5_1:10897017-10897036 None:intergenic 55.0%
!! AAAGCAGTCAGGATGGTGGG+AGG - chr5_1:10897237-10897256 Msa0717190:intron 55.0%
GGCAATCTTCGGCACAAAGC+TGG - chr5_1:10897591-10897610 Msa0717190:intron 55.0%
ATTGCATGCTGGAGGGGAAG+GGG + chr5_1:10897723-10897742 None:intergenic 55.0%
CATTGCATGCTGGAGGGGAA+GGG + chr5_1:10897724-10897743 None:intergenic 55.0%
GTGGAGGCAATGGAATCGCT+TGG - chr5_1:10897815-10897834 Msa0717190:intron 55.0%
GAGGCAATGGAATCGCTTGG+TGG - chr5_1:10897818-10897837 Msa0717190:intron 55.0%
TAACCAGTGGGAGTCAGGCT+CGG - chr5_1:10898120-10898139 Msa0717190:intron 55.0%
ATGCCCAATGTTGCAGTGGC+TGG + chr5_1:10898163-10898182 None:intergenic 55.0%
AGTACACACCTGGAATGGGG+AGG - chr5_1:10898217-10898236 Msa0717190:CDS 55.0%
ACACCTGGAATGGGGAGGAA+TGG - chr5_1:10898222-10898241 Msa0717190:CDS 55.0%
GATCCATTCCTCCCCATTCC+AGG + chr5_1:10898228-10898247 None:intergenic 55.0%
! GCAAACACGAGTTGGGGAGT+AGG - chr5_1:10898256-10898275 Msa0717190:CDS 55.0%
CCAGGAAAACCCCGATCTCT+GGG + chr5_1:10898388-10898407 None:intergenic 55.0%
ACCAGGAAAACCCCGATCTC+TGG + chr5_1:10898389-10898408 None:intergenic 55.0%
! GATCGGGGTTTTCCTGGTCA+TGG - chr5_1:10898391-10898410 Msa0717190:CDS 55.0%
! GGGGTTTTCCTGGTCATGGT+AGG - chr5_1:10898395-10898414 Msa0717190:CDS 55.0%
TAGTTAGAGGCAGAGCTGCG+TGG - chr5_1:10898428-10898447 Msa0717190:CDS 55.0%
TGGAACAGGCAACCGCCATT+TGG - chr5_1:10898448-10898467 Msa0717190:CDS 55.0%
!! AGGCAACCGCCATTTGGTGT+TGG - chr5_1:10898454-10898473 Msa0717190:CDS 55.0%
ACTGTCGCCGTTGCAGTTGC+CGG + chr5_1:10892210-10892229 None:intergenic 60.0%
GACAGTTCCGGCGACAGTTC+CGG - chr5_1:10892224-10892243 Msa0717190:CDS 60.0%
GACAGTTCCGGTGGCCGTTA+CGG - chr5_1:10892236-10892255 Msa0717190:CDS 60.0%
! AACTTGCTTCGTCTCCGCCG+CGG + chr5_1:10892265-10892284 None:intergenic 60.0%
! GAAGAAGAAGCGCGGTCGTC+CGG - chr5_1:10892395-10892414 Msa0717190:CDS 60.0%
GTCTCGTTCTCTGCGATCGC+CGG - chr5_1:10892505-10892524 Msa0717190:CDS 60.0%
TCACCGCCTGAAGGTCCCTT+AGG + chr5_1:10894399-10894418 None:intergenic 60.0%
TTGCATGCTGGAGGGGAAGG+GGG + chr5_1:10897722-10897741 None:intergenic 60.0%
GCATTGCATGCTGGAGGGGA+AGG + chr5_1:10897725-10897744 None:intergenic 60.0%
TTTCCGAGCCTGACTCCCAC+TGG + chr5_1:10898126-10898145 None:intergenic 60.0%
! CCCAGAGATCGGGGTTTTCC+TGG - chr5_1:10898385-10898404 Msa0717190:CDS 60.0%
CCTGGTTCCCTACCATGACC+AGG + chr5_1:10898406-10898425 None:intergenic 60.0%
CCTGGTCATGGTAGGGAACC+AGG - chr5_1:10898403-10898422 Msa0717190:CDS 60.0%
AGTTCCGGCGACAGTTCCGG+TGG - chr5_1:10892227-10892246 Msa0717190:CDS 65.0%
TCTGCGATCGCCGGTGAGTG+AGG - chr5_1:10892514-10892533 Msa0717190:CDS 65.0%
CTGCGATCGCCGGTGAGTGA+GGG - chr5_1:10892515-10892534 Msa0717190:CDS 65.0%
GGGACCTTCAGGCGGTGACA+CGG - chr5_1:10894401-10894420 Msa0717190:intron 65.0%
GGACCTTCAGGCGGTGACAC+GGG - chr5_1:10894402-10894421 Msa0717190:intron 65.0%
ACACCCGTGTCACCGCCTGA+AGG + chr5_1:10894408-10894427 None:intergenic 65.0%
ATGCTGGAGGGGAAGGGGGT+TGG + chr5_1:10897718-10897737 None:intergenic 65.0%
GAGGCAGAGCTGCGTGGAAC+AGG - chr5_1:10898434-10898453 Msa0717190:CDS 65.0%
ACTCGCTGCCCTTTGGGCAG+AGG + chr5_1:10898499-10898518 None:intergenic 65.0%
ACGGCCACCGGAACTGTCGC+CGG + chr5_1:10892234-10892253 None:intergenic 70.0%
GCGGTCTCCGTAACGGCCAC+CGG + chr5_1:10892246-10892265 None:intergenic 70.0%
GGTGGCCGTTACGGAGACCG+CGG - chr5_1:10892245-10892264 Msa0717190:CDS 70.0%
CTCCGCCGCGGTCTCCGTAA+CGG + chr5_1:10892253-10892272 None:intergenic 70.0%
AAGCGCGGTCGTCCGGCGAA+AGG - chr5_1:10892402-10892421 Msa0717190:CDS 70.0%
GGCCGTTACGGAGACCGCGG+CGG - chr5_1:10892248-10892267 Msa0717190:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 10891800 10898892 10891800 ID=Msa0717190;Name=Msa0717190
chr5_1 mRNA 10891800 10898892 10891800 ID=Msa0717190-mRNA-1;Parent=Msa0717190;Name=Msa0717190-mRNA-1;_AED=0.08;_eAED=0.08;_QI=383|0.88|0.8|1|0.66|0.7|10|310|1260
chr5_1 exon 10891800 10893959 10891800 ID=Msa0717190-mRNA-1:exon:4477;Parent=Msa0717190-mRNA-1
chr5_1 exon 10894058 10894152 10894058 ID=Msa0717190-mRNA-1:exon:4476;Parent=Msa0717190-mRNA-1
chr5_1 exon 10894702 10894817 10894702 ID=Msa0717190-mRNA-1:exon:4475;Parent=Msa0717190-mRNA-1
chr5_1 exon 10895144 10895194 10895144 ID=Msa0717190-mRNA-1:exon:4474;Parent=Msa0717190-mRNA-1
chr5_1 exon 10895275 10895334 10895275 ID=Msa0717190-mRNA-1:exon:4473;Parent=Msa0717190-mRNA-1
chr5_1 exon 10895444 10895571 10895444 ID=Msa0717190-mRNA-1:exon:4472;Parent=Msa0717190-mRNA-1
chr5_1 exon 10895666 10896536 10895666 ID=Msa0717190-mRNA-1:exon:4471;Parent=Msa0717190-mRNA-1
chr5_1 exon 10896715 10896902 10896715 ID=Msa0717190-mRNA-1:exon:4470;Parent=Msa0717190-mRNA-1
chr5_1 exon 10897881 10897960 10897881 ID=Msa0717190-mRNA-1:exon:4469;Parent=Msa0717190-mRNA-1
chr5_1 exon 10898166 10898892 10898166 ID=Msa0717190-mRNA-1:exon:4468;Parent=Msa0717190-mRNA-1
chr5_1 five_prime_UTR 10898510 10898892 10898510 ID=Msa0717190-mRNA-1:five_prime_utr;Parent=Msa0717190-mRNA-1
chr5_1 CDS 10898166 10898509 10898166 ID=Msa0717190-mRNA-1:cds;Parent=Msa0717190-mRNA-1
chr5_1 CDS 10897881 10897960 10897881 ID=Msa0717190-mRNA-1:cds;Parent=Msa0717190-mRNA-1
chr5_1 CDS 10896715 10896902 10896715 ID=Msa0717190-mRNA-1:cds;Parent=Msa0717190-mRNA-1
chr5_1 CDS 10895666 10896536 10895666 ID=Msa0717190-mRNA-1:cds;Parent=Msa0717190-mRNA-1
chr5_1 CDS 10895444 10895571 10895444 ID=Msa0717190-mRNA-1:cds;Parent=Msa0717190-mRNA-1
chr5_1 CDS 10895275 10895334 10895275 ID=Msa0717190-mRNA-1:cds;Parent=Msa0717190-mRNA-1
chr5_1 CDS 10895144 10895194 10895144 ID=Msa0717190-mRNA-1:cds;Parent=Msa0717190-mRNA-1
chr5_1 CDS 10894702 10894817 10894702 ID=Msa0717190-mRNA-1:cds;Parent=Msa0717190-mRNA-1
chr5_1 CDS 10894058 10894152 10894058 ID=Msa0717190-mRNA-1:cds;Parent=Msa0717190-mRNA-1
chr5_1 CDS 10892110 10893959 10892110 ID=Msa0717190-mRNA-1:cds;Parent=Msa0717190-mRNA-1
chr5_1 three_prime_UTR 10891800 10892109 10891800 ID=Msa0717190-mRNA-1:three_prime_utr;Parent=Msa0717190-mRNA-1
Gene Sequence

>Msa0717190

ATGGAACAATCAAAGCCGGAAACACCGGCAACTGCAACGGCGACAGTTCCGGCGACAGTTCCGGTGGCCGTTACGGAGACCGCGGCGGAGACGAAGCAAGTTGAAGTTCCGACGAAGGCTGTTTCCGATGTGAACATGACGGAGAGAGACGGCGGTTGTTGTACGGCGCCGAAAGTAGTTCTCGCTGTCATCGCCGAGAACAGTGAGGTTATGAAGAAGAAGCGCGGTCGTCCGGCGAAAGGAACTCCGAAAGTAGCTCCTCCGCCGAAGCAGATCAAGAAGGAAGATGAAGATGTTTGCTTCATTTGCTTCGACGGTGGAAGTCTCGTTCTCTGCGATCGCCGGGGTTGTCCTAAAGCGTATCATCCGGCGTGTGTCAAGCGAGATGAAGCGTTCTTCCGTTCAAAAGCCAAATGGAATTGCGGTTGGCATATATGTAGCTCTTGTCAGAAAGCATCCCATTATATGTGCTATACATGTACGTATTCTTTGTGCAAGGGGTGTATAAAAAATGCGGATTTTGTTTCTGTTAGAGAAAATAAAGGTTTGTGTGGAATTTGCAAGAAAACTATAATGCTGATTGAGAACAGTGCCCAGGGAAATAAGGAAATGTGTGACGTGGATTTCGATGACAAGAGCAGCTGGGAGTATCTTTTCAAGGTGTATTGGACATTATTGAAAGAGAATCTATCTTTAACGTTTGATGAGCTCCTTCGAGCTAAAAACCCATTGAGCGCTGCTGCTCCTATGGTTCAAACTTCCCACAAACTTTACCATCTTAAAGATGAAAAAGGTTCTGGTTTTGAGAACTCCTGTGTAGATATAGAATCAAATAATTTGAAAAACAAGAAGCCTAAGGGACCTTCAGGCGGTGACACGGGTGTGTCTTTGCCTGAGTGCAAGAGATGGGCATCAAAGGAGCTTCTAGAGTTTGTCTCACATATGAAAAATGGTGATACGTCTATACTTTCTCAATTTGATGTCCAGAATCTCTTGCTGGAGTATGTAAAGAAAAACAATCTGCGTGACCCTCAACAGAAATCTCTAATTGTTTGCGACTCTAGACTAGTAAATTTGTTTGGAAAAGCTCGTCTTGGATACATTGAAATGCTAATGCACCTTGAACCCCACTTTCTTATAAAAGAAAATACCCCTGCAGAAAATAATTTTGGAGCAGGAATTAGTGATGCTGTTGCAAATGGAAAGGAGGCTATTGACAGTAACAATAAACAGTCAGTATTAGTCAATGATAAGAGATGCACAAGTAAAAAGGCTGACATGCCTGTGCCACAAAATAATCAAGATGCATACGCGTCAATAAATGCTCACAACATTAACTTGATCTACTTGCGGCGAAGTCTGATGGAGAGTCTGACTGATGATAGTGAAAGGATTCACGAGAAGGTTGTTGGTTCTTTTGTGCGGATAAGAATCTCTAGTGGTGATCAGAAACAAGATATGTATAGACTTGTCCAAGTTGTAGGTACAAGCAAGGTTGCTGAACCTTACAAAATTGGCACAAGAACGACTGACATTAAGCTTGAAATTTTAAATTTAAACCGGAAGGAGGTCATATCGATAGACGAGATTTCGAATCAGGAGTTCTCCGAGGATGAATGCAAGCGATTGCGTCAAAGTATAAAGTATGGGCTTTCAAAGAGATTGACTGTGGGAGAGATTCTGAACAAAGCGCTCACATTTCAAGAAATTAGAGTCAATGATTTATTGGAAGCTGAGAAATTGCGGCTTAATAATCTTCGGGATAGAGCAAGTGAGAAGGGACACAGAAAAGAATATCCTTTACCATTTACTTCTTTCCTAAATATGCTAAACTGTGGACTGCATGAAGTTCCAGATGTACACTCTGACCCCAATTTGGATTCATTGTATGAGTCTGATGAAGATGCTGGAGAGTCAGATGGCAATAAACAAGATGGCAATATACCTATTTTCTCCAGAATTTGGGATGGTGTCTTGAATGGTGTTGGGGGAAGAACACGGGACTTGACCACTGCCAGTGACCCAATTGAGAATACATGCTTACTAAAGAAGCATATCAACCCAAACGAAACTCCTATTGATGATAGTGCTGATGTTGTTACGAAATCAGAAGTGTCTAGTGTTGCAGTGGACATTTCATCTCCACTTATCTCTACAGGGATTGCGCAGCCATTTGATGATTTTATGAATGATAGATCATGGCATTATCAGGATCCATCTGGGAAGGTTCAAGGACCTTTTTCTATGTTGCAGCTGTATAAGTGGAATGCAAGTGGACATTTCCCTCCAGATCTCAAAGTATGGAGGATAGATGAGAAACAAGTAAACTCTATATTGTTAACTGATGCACTTAATGGGAAGTGCTCCAAAAATGTGCCATTGCGGAACAACAGCCTATTGCTCTCTTTAGGAGCCAATGTTGCATTGGATGACAAAGAAAGCAGTCAGGATGGTGGGAGGAATTCAACAACGAATGAAATTTCTGCAGATAGCCGAATCATAGAACAGATCAGAGAACAAAAAGTGGATGATACTTCGACCCAGTCTAATGGTAAAGATGAATCCGTTAGGAGCAATGGATGGCATGACCAGTCACATGTACACACTTCTATACAACCAACTGCCTTTTCTGAGAATTTGAATGAGAATCACACCAACAAATTAAGGGAGGATCATGGGATTGAAAAAAACTCTGAAGATAATGGAAATCATGACTCAAACAGGACTTCTGGTGGTCAGAGTAATAGTGGTCAGAATCATCAGAAGCAATCAGATAGTGAAGACAACTCAGGGCAATCTTCGGCACAAAGCTGGAGAAACCATAATGTAAATACTTCTTCCAATTGCTTGGATACCACATCAGCTCATGTTTCTGAGACAAGAACATCACCACTTAAGCTGGGATTTGATTTGCACCAACCCCCTTCCCCTCCAGCATGCAATGCAACTACGTGGCAGGCTATTATAGGTGAACCAGATGATTTTGATGAATCAGTTTCAGATCTTTTGGCAGAAGTGGAGGCAATGGAATCGCTTGGTGGCTTGGAATCTCCCACTTCAATCATGAAACGTAGTGAGGAATTGACTGATGGTTCTAAAAATCTTTGTCTCAGTTTTGCAGAGCTTAGTCCAATGCTTGATGCAGGTAAAAGCGATGCATTGAGCTCCACATGTGATTTACAGTTACTATCTCAATCTACAGCAGCAGAGGAACCGTTACAACAAGCAGATGTCAATCATCATCATCAAAGAATATCAGAGGAGCTTTCCTCGAGAAATTCTAAAGTTGACGTGGGTTCGAAGAACATATGTGTTTCAAGTAACCAGTGGGAGTCAGGCTCGGAAAATTCTTCTATTTTTCCAGCCACTGCAACATTGGGCATGACTGTAGACACCACTTGGAGACTTGGATTGGAAAGTACACACCTGGAATGGGGAGGAATGGATCAACGAAATGCAAACACGAGTTGGGGAGTAGGACATACGGCAGTGAATGAGAACAGAAGCTCAAATTCATGCACTTCTGTAGTAACTCCAAGCTTTGGGGATAGCCAAACAAGATACGGAAGTGATCGATTTTCTGTGCCCAGAGATCGGGGTTTTCCTGGTCATGGTAGGGAACCAGGTTTAGTTAGAGGCAGAGCTGCGTGGAACAGGCAACCGCCATTTGGTGTTGGAAATGGAGGCTCGTATAGACCTCTGCCCAAAGGGCAGCGAGTTTGTAAATTTTATGAAAGTGGGTACTGTAGGAAAGGGGCATCCTGTGAATACTTCCACCCATGA
Protein sequence

>Msa0717190

MEQSKPETPATATATVPATVPVAVTETAAETKQVEVPTKAVSDVNMTERDGGCCTAPKVVLAVIAENSEVMKKKRGRPAKGTPKVAPPPKQIKKEDEDVCFICFDGGSLVLCDRRGCPKAYHPACVKRDEAFFRSKAKWNCGWHICSSCQKASHYMCYTCTYSLCKGCIKNADFVSVRENKGLCGICKKTIMLIENSAQGNKEMCDVDFDDKSSWEYLFKVYWTLLKENLSLTFDELLRAKNPLSAAAPMVQTSHKLYHLKDEKGSGFENSCVDIESNNLKNKKPKGPSGGDTGVSLPECKRWASKELLEFVSHMKNGDTSILSQFDVQNLLLEYVKKNNLRDPQQKSLIVCDSRLVNLFGKARLGYIEMLMHLEPHFLIKENTPAENNFGAGISDAVANGKEAIDSNNKQSVLVNDKRCTSKKADMPVPQNNQDAYASINAHNINLIYLRRSLMESLTDDSERIHEKVVGSFVRIRISSGDQKQDMYRLVQVVGTSKVAEPYKIGTRTTDIKLEILNLNRKEVISIDEISNQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALTFQEIRVNDLLEAEKLRLNNLRDRASEKGHRKEYPLPFTSFLNMLNCGLHEVPDVHSDPNLDSLYESDEDAGESDGNKQDGNIPIFSRIWDGVLNGVGGRTRDLTTASDPIENTCLLKKHINPNETPIDDSADVVTKSEVSSVAVDISSPLISTGIAQPFDDFMNDRSWHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLKVWRIDEKQVNSILLTDALNGKCSKNVPLRNNSLLLSLGANVALDDKESSQDGGRNSTTNEISADSRIIEQIREQKVDDTSTQSNGKDESVRSNGWHDQSHVHTSIQPTAFSENLNENHTNKLREDHGIEKNSEDNGNHDSNRTSGGQSNSGQNHQKQSDSEDNSGQSSAQSWRNHNVNTSSNCLDTTSAHVSETRTSPLKLGFDLHQPPSPPACNATTWQAIIGEPDDFDESVSDLLAEVEAMESLGGLESPTSIMKRSEELTDGSKNLCLSFAELSPMLDAGKSDALSSTCDLQLLSQSTAAEEPLQQADVNHHHQRISEELSSRNSKVDVGSKNICVSSNQWESGSENSSIFPATATLGMTVDTTWRLGLESTHLEWGGMDQRNANTSWGVGHTAVNENRSSNSCTSVVTPSFGDSQTRYGSDRFSVPRDRGFPGHGREPGLVRGRAAWNRQPPFGVGNGGSYRPLPKGQRVCKFYESGYCRKGASCEYFHP*