AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0799640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0799640 MtrunA17_Chr5g0405061 97.731 617 14 0 644 1260 23 639 0.0 1252
Msa0799640 MtrunA17_Chr5g0405071 97.171 601 17 0 1 601 1 601 0.0 1216
Msa0799640 MtrunA17_Chr3g0145201 55.230 478 195 7 72 537 207 677 4.92e-156 494
Msa0799640 MtrunA17_Chr3g0145241 54.791 407 170 4 207 601 5 409 3.14e-123 387
Msa0799640 MtrunA17_Chr5g0405031 65.236 233 71 6 60 287 33 260 1.26e-90 308
Msa0799640 MtrunA17_Chr5g0405031 38.235 510 201 9 645 1104 249 694 2.59e-77 271
Msa0799640 MtrunA17_Chr3g0109611 29.520 542 330 11 97 610 15 532 1.76e-59 214
Msa0799640 MtrunA17_Chr3g0109631 27.629 485 309 11 97 561 15 477 8.59e-51 187
Msa0799640 MtrunA17_Chr3g0109641 28.473 583 329 18 97 609 15 579 4.09e-50 192
Msa0799640 MtrunA17_Chr3g0109591 29.048 420 272 7 93 495 9 419 1.53e-46 173
Msa0799640 MtrunA17_Chr6g0477441 33.951 324 175 11 303 615 39 334 2.04e-35 138
Msa0799640 MtrunA17_Chr3g0109671 39.695 131 78 1 90 219 7 137 1.04e-29 115
Msa0799640 MtrunA17_Chr7g0274561 28.455 369 220 11 207 567 29 361 1.86e-28 120
Msa0799640 MtrunA17_Chr7g0274551 37.121 132 75 1 64 195 1 124 2.77e-27 108
Msa0799640 MtrunA17_Chr3g0145231 61.667 60 23 0 142 201 4 63 3.61e-25 100
Msa0799640 MtrunA17_Chr7g0274571 29.965 287 159 9 282 557 64 319 3.07e-24 105
Msa0799640 MtrunA17_Chr3g0145221 61.538 78 26 2 72 149 207 280 3.90e-24 105
Msa0799640 MtrunA17_Chr3g0145251 47.826 92 47 1 699 789 125 216 4.18e-19 93.2
Msa0799640 MtrunA17_Chr3g0145251 41.441 111 57 6 1152 1259 523 628 2.42e-11 68.2
Msa0799640 MtrunA17_Chr3g0109661 33.333 126 75 3 437 561 41 158 4.98e-13 68.9
Msa0799640 MtrunA17_Chr3g0109581 41.176 85 48 1 523 607 73 155 1.75e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0799640 AT3G51120.1 48.774 775 312 16 64 800 71 798 0.0 676
Msa0799640 AT2G16485.1 44.541 806 348 19 96 816 598 1389 0.0 623
Msa0799640 AT2G16485.2 44.823 792 351 19 96 816 598 1374 0.0 617
Msa0799640 AT2G18090.2 53.086 324 142 3 86 399 68 391 1.31e-114 377
Msa0799640 AT2G18090.2 34.930 355 211 9 723 1068 448 791 7.74e-37 150
Msa0799640 AT2G18090.1 53.086 324 142 3 86 399 68 391 2.46e-114 377
Msa0799640 AT2G18090.1 33.422 377 216 9 723 1068 448 820 4.91e-36 148
Msa0799640 AT5G63700.1 27.798 554 317 15 100 598 25 550 4.58e-56 206
Msa0799640 AT5G63700.2 27.308 520 301 13 100 567 25 519 1.09e-54 200
Msa0799640 AT5G08430.2 33.670 297 169 9 303 598 32 301 9.63e-33 133
Msa0799640 AT5G08430.1 32.997 297 171 8 303 598 32 301 1.72e-32 134
Msa0799640 AT5G23480.3 26.452 310 186 8 298 598 22 298 4.89e-21 98.2
Msa0799640 AT5G23480.2 26.452 310 186 8 298 598 22 298 4.89e-21 98.2
Msa0799640 AT5G23480.5 26.452 310 186 8 298 598 22 298 4.89e-21 98.2
Msa0799640 AT5G23480.4 26.452 310 186 8 298 598 22 298 4.89e-21 98.2
Msa0799640 AT5G23480.6 26.452 310 186 8 298 598 22 298 4.89e-21 98.2
Msa0799640 AT5G23480.1 26.351 296 172 9 298 584 22 280 1.19e-18 90.5

Find 319 sgRNAs with CRISPR-Local

Find 487 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAGAATAAAATGAAAATT+TGG 0.133311 5_3:+12911162 None:intergenic
CCAGGTTAAATTACAATAAT+TGG 0.138948 5_3:+12911314 None:intergenic
AATACTTCCACCCATGATTT+TGG 0.149348 5_3:-12911400 Msa0799640:exon
ACCCCTGCAGAAAATAATTT+TGG 0.173795 5_3:-12915217 Msa0799640:CDS
TTGTTAACTGATGCACTTAA+TGG 0.202378 5_3:-12912832 Msa0799640:CDS
CTCATACAATGAATCCAAAT+TGG 0.204917 5_3:+12913394 None:intergenic
AGAATCACACCAACAAATTA+AGG 0.216582 5_3:-12912522 Msa0799640:CDS
GGAGCTGTTTGTGATAATTT+TGG 0.228997 5_3:+12917918 None:intergenic
CATACTCCAGCAAGAGATTC+TGG 0.236810 5_3:+12915383 None:intergenic
GTTGCTGAACCTTACAAAAT+TGG 0.246056 5_3:-12914778 Msa0799640:CDS
TGGAAGAAGTATTTACATTA+TGG 0.249164 5_3:+12912347 None:intergenic
TGTACACTCTGACCCCAATT+TGG 0.264861 5_3:-12913408 Msa0799640:CDS
TACCATCTTAAAGATGAAAA+AGG 0.271358 5_3:-12915595 Msa0799640:CDS
AATTAGTACTGGTATGTTCT+TGG 0.273162 5_3:-12911133 Msa0799640:three_prime_UTR
ATCAATAATCATGAATAATT+AGG 0.282662 5_3:+12917791 None:intergenic
CTGTAGTAACTCCAAGCTTT+GGG 0.292547 5_3:-12911643 Msa0799640:CDS
TGAATCAGTTTCAGATCTTT+TGG 0.293661 5_3:-12912179 Msa0799640:CDS
CATTTCCATTTCCATGTGTT+AGG 0.299346 5_3:-12917874 Msa0799640:five_prime_UTR
ACCCACAGTTTAGCATATTT+AGG 0.300163 5_3:+12913943 None:intergenic
TCAAATGCGGCCAATGCTAA+TGG 0.306495 5_3:+12911374 None:intergenic
ATGATCCTCCCTTAATTTGT+TGG 0.309490 5_3:+12912513 None:intergenic
AGTAAGCATGTATTCTCAAT+TGG 0.319348 5_3:+12913144 None:intergenic
TACATGTATAGCACATATAA+TGG 0.327124 5_3:+12916077 None:intergenic
ACTGTCTCCGTTGCAGTTGC+CGG 0.332361 5_3:+12917696 None:intergenic
GATCACTTCCGTATCTTGTT+TGG 0.332764 5_3:+12911615 None:intergenic
TTGCGTCAAAGTATAAAGTA+TGG 0.336240 5_3:-12914537 Msa0799640:CDS
TCTAGACTAGTAAATTTGTT+TGG 0.338628 5_3:-12915307 Msa0799640:CDS
CAAGAATAAAATGAAAATTT+GGG 0.340376 5_3:+12911163 None:intergenic
ACTACGTGGCAGGCTATTAT+AGG 0.342752 5_3:-12912220 Msa0799640:CDS
CTTCATAACCTCACTGTTCT+CGG 0.347536 5_3:+12917527 None:intergenic
TGATAGATCATGGCATTATC+AGG 0.347539 5_3:-12912977 Msa0799640:CDS
CTCTGATCTGTTCTATGATT+CGG 0.347556 5_3:+12912674 None:intergenic
TAAGAGATGCACAAGTAAAA+AGG 0.350827 5_3:-12915116 Msa0799640:CDS
GAACAGTGCCCAGGGAAATA+AGG 0.351756 5_3:-12915951 Msa0799640:CDS
ACCAGGAAAACCCCGATCTC+TGG 0.361017 5_3:+12911580 None:intergenic
GAAGACACCATCCCAAATTC+TGG 0.362777 5_3:+12913212 None:intergenic
TCATCAATAGGAGTTTCGTT+TGG 0.363221 5_3:+12913105 None:intergenic
AAGAACATACCAGTACTAAT+TGG 0.363265 5_3:+12911135 None:intergenic
GACAGTTCCGGCGACAGTTC+CGG 0.368439 5_3:-12917679 Msa0799640:CDS
AGGGAACCAGGTTTAGTTAG+AGG 0.373757 5_3:-12911551 Msa0799640:CDS
TCATACAATGAATCCAAATT+GGG 0.377658 5_3:+12913395 None:intergenic
TACAGCTGCAACATAGAAAA+AGG 0.377698 5_3:+12912931 None:intergenic
CAAAGTACCGCAATTCCATT+TGG 0.377811 5_3:+12917102 None:intergenic
TCCCTCCAGATCTCAAAGTA+TGG 0.380048 5_3:-12912885 Msa0799640:CDS
ATTGCATGCTGGAGGGGAAG+GGG 0.380816 5_3:+12912246 None:intergenic
ATGGTGTCTTCAATGGTGTT+GGG 0.380991 5_3:-12913200 Msa0799640:CDS
CCGCCATTTGGTGTTGGTAA+TGG 0.381731 5_3:-12911506 Msa0799640:CDS
GTTTCTGTTAGAGAAAATAA+AGG 0.383747 5_3:-12916013 Msa0799640:CDS
TGTTAACTGATGCACTTAAT+GGG 0.385550 5_3:-12912831 Msa0799640:CDS
GATCCATTCCTCCCCATTCC+AGG 0.385876 5_3:+12911741 None:intergenic
TCCCAAATTCTGGAGAAAAT+AGG 0.386571 5_3:+12913222 None:intergenic
CATGACTCAAACAGGACTTC+TGG 0.386601 5_3:-12912457 Msa0799640:CDS
TCTGTAGTAACTCCAAGCTT+TGG 0.386688 5_3:-12911644 Msa0799640:CDS
CATCAATAGGAGTTTCGTTT+GGG 0.387224 5_3:+12913106 None:intergenic
ATTGCGGCTTAATAATCTTC+GGG 0.390772 5_3:-12914021 Msa0799640:CDS
TCTTCCTTCTTGATCTGCTT+CGG 0.391127 5_3:+12917456 None:intergenic
GATGGTGTCTTCAATGGTGT+TGG 0.392754 5_3:-12913201 Msa0799640:CDS
TTTACAAACTCGCTGCCCTT+TGG 0.394552 5_3:+12911463 None:intergenic
TATAGACTTGTCCAAGTTGT+AGG 0.396375 5_3:-12914905 Msa0799640:intron
ATATTTAGGAAAGAAGTAAA+TGG 0.401021 5_3:+12913957 None:intergenic
TTACAAACTCGCTGCCCTTT+GGG 0.401113 5_3:+12911464 None:intergenic
CATTGCATGCTGGAGGGGAA+GGG 0.401547 5_3:+12912245 None:intergenic
GACAGTTCCGGTGGCCGTTA+CGG 0.402343 5_3:-12917667 Msa0799640:CDS
TCAAGTAACCAGTGGGAGTC+AGG 0.405251 5_3:-12911851 Msa0799640:CDS
CCTGGTCATGGTAGGGAACC+AGG 0.405604 5_3:-12911563 Msa0799640:CDS
GATAGACGAGATTTCGAATC+AGG 0.407835 5_3:-12914695 Msa0799640:CDS
TCATCTCCACTTATCTCTAC+AGG 0.407890 5_3:-12913030 Msa0799640:CDS
CTCATTCAAATTCTCAGAAA+AGG 0.410353 5_3:+12912543 None:intergenic
AAATACTTCTTCCAATTGCT+TGG 0.413010 5_3:-12912338 Msa0799640:CDS
CTTTAAGATGGTAAAGTTTG+TGG 0.413487 5_3:+12915605 None:intergenic
ATTTCCATTTCCATGTGTTA+GGG 0.414761 5_3:-12917873 Msa0799640:five_prime_UTR
ACGAAATGCAAACACGAGTT+GGG 0.415413 5_3:-12911717 Msa0799640:CDS
CTAACACATGGAAATGGAAA+TGG 0.415532 5_3:+12917875 None:intergenic
GGCAATCTTCGGCACAAAGC+TGG 0.416012 5_3:-12912375 Msa0799640:CDS
AATTGCGGCTTAATAATCTT+CGG 0.416863 5_3:-12914022 Msa0799640:CDS
ATTCATCTTTACCATTAGAC+TGG 0.419959 5_3:+12912626 None:intergenic
AACAGCCTATTGCTCTCTTT+AGG 0.421297 5_3:-12912778 Msa0799640:CDS
GCATTGCATGCTGGAGGGGA+AGG 0.421721 5_3:+12912244 None:intergenic
GAGGCAGAGCTGCGTGGAAC+AGG 0.422436 5_3:-12911532 Msa0799640:CDS
TGATGTCCAGAATCTCTTGC+TGG 0.429046 5_3:-12915389 Msa0799640:CDS
TTCGGCGGAGGAGCTACTTT+CGG 0.429190 5_3:+12917474 None:intergenic
CTATGTTGCAGCTGTATAAG+TGG 0.431594 5_3:-12912924 Msa0799640:CDS
CAAATGCGGCCAATGCTAAT+GGG 0.434386 5_3:+12911375 None:intergenic
TTTCCAGCCACTGCAACATT+GGG 0.434638 5_3:-12911809 Msa0799640:CDS
TGGCTCCTAAAGAGAGCAAT+AGG 0.435384 5_3:+12912773 None:intergenic
AAGAACATCACCACTTAAGC+TGG 0.437573 5_3:-12912287 Msa0799640:CDS
TGGCATTATCAGGATCCATC+TGG 0.437750 5_3:-12912967 Msa0799640:CDS
ATGGAAATCATGACTCAAAC+AGG 0.438689 5_3:-12912465 Msa0799640:CDS
TGGAACAGGCAACCGCCATT+TGG 0.439002 5_3:-12911518 Msa0799640:CDS
GAAAGTAGAGAGAGAATATG+TGG 0.439258 5_3:+12917987 None:intergenic
GTAAGCATGTATTCTCAATT+GGG 0.439319 5_3:+12913145 None:intergenic
TTATAAGAAAGTGGGGTTCA+AGG 0.443433 5_3:+12915248 None:intergenic
GTAGACACCACTTGGAGACT+TGG 0.445086 5_3:-12911779 Msa0799640:CDS
AATGGAATCGCTTGGTGGCT+TGG 0.445389 5_3:-12912143 Msa0799640:CDS
GAAGAAGAAGCGCGGTCGTC+CGG 0.446023 5_3:-12917508 Msa0799640:CDS
ATCCTCCATACTTTGAGATC+TGG 0.448703 5_3:+12912880 None:intergenic
ACTGATTCATCAAAATCATC+TGG 0.450681 5_3:+12912193 None:intergenic
TTGGGGTCAGAGTGTACATC+TGG 0.451024 5_3:+12913413 None:intergenic
ACATGTATAGCACATATAAT+GGG 0.452039 5_3:+12916078 None:intergenic
TGGTGTCTTCAATGGTGTTG+GGG 0.452997 5_3:-12913199 Msa0799640:CDS
ACATCAGCACTATCATCAAT+AGG 0.453370 5_3:+12913093 None:intergenic
AAAACCCTAACACATGGAAA+TGG 0.453549 5_3:+12917869 None:intergenic
CGATGTGGTATCCAAGCAAT+TGG 0.454186 5_3:+12912327 None:intergenic
AATGAGCAATCACATAAAAC+AGG 0.454988 5_3:+12911239 None:intergenic
GGAAAGTACACACCTGGAAT+GGG 0.456457 5_3:-12911753 Msa0799640:CDS
GATACTTCGACCCAGTCTAA+TGG 0.457443 5_3:-12912637 Msa0799640:CDS
ATGCCCAATGTTGCAGTGGC+TGG 0.457866 5_3:+12911806 None:intergenic
TTTAAGATGGTAAAGTTTGT+GGG 0.462817 5_3:+12915606 None:intergenic
ATTGAGCGCTGCTGCTCCTA+TGG 0.466028 5_3:-12915638 Msa0799640:CDS
TTGCATGCTGGAGGGGAAGG+GGG 0.466493 5_3:+12912247 None:intergenic
CTACTTGCGGCGAAGTCTGA+TGG 0.467567 5_3:-12915023 Msa0799640:CDS
GTTTGCTTCATTTGCTTCGA+CGG 0.470458 5_3:-12917426 Msa0799640:CDS
ATACCATTTCCTTATTTCCC+TGG 0.470501 5_3:+12915942 None:intergenic
GAAGAGATCTCTATCAAGCT+AGG 0.470692 5_3:+12917960 None:intergenic
TGGAAAGTACACACCTGGAA+TGG 0.470741 5_3:-12911754 Msa0799640:CDS
TAGGAGCAGCAGCGCTCAAT+GGG 0.471296 5_3:+12915641 None:intergenic
GATCCATCTGGGAAGGTTCA+AGG 0.471913 5_3:-12912955 Msa0799640:CDS
CTCAATTGGGTCACTGGCAG+TGG 0.472098 5_3:+12913158 None:intergenic
GTTTGGCTATCCCCAAAGCT+TGG 0.472616 5_3:+12911632 None:intergenic
AGGATTCACGAGAAGGTTGT+TGG 0.472648 5_3:-12914977 Msa0799640:CDS
TTGTGGGAAGTTTGAACCAT+AGG 0.473304 5_3:+12915622 None:intergenic
CTTGTGTTACCAATTAGTAC+TGG 0.477434 5_3:-12911144 Msa0799640:three_prime_UTR
CAATTAGAGATTTCTGTTGA+GGG 0.477581 5_3:+12915338 None:intergenic
TACCATTTCCTTATTTCCCT+GGG 0.478038 5_3:+12915943 None:intergenic
CACCACTTGGAGACTTGGAT+TGG 0.478908 5_3:-12911774 Msa0799640:CDS
ATTTGGGATGGTGTCTTCAA+TGG 0.479934 5_3:-12913207 Msa0799640:CDS
AAGAAGCCTAAGGGACCTTC+AGG 0.481000 5_3:-12915520 Msa0799640:CDS
ATTAGTGATGCTGTTGCAAA+TGG 0.481762 5_3:-12915187 Msa0799640:CDS
CGTATAGACCTCTGCCCAAA+GGG 0.484540 5_3:-12911478 Msa0799640:CDS
ATAGGAGCAGCAGCGCTCAA+TGG 0.488771 5_3:+12915640 None:intergenic
GCTAATGGGATCCAAAATCA+TGG 0.489646 5_3:+12911389 None:intergenic
CCAATTATTGTAATTTAACC+TGG 0.490055 5_3:-12911314 Msa0799640:three_prime_UTR
ATGCAATGCAACTACGTGGC+AGG 0.491186 5_3:-12912230 Msa0799640:CDS
TGTATTCTCAATTGGGTCAC+TGG 0.492209 5_3:+12913152 None:intergenic
CTATCGATATGACCTCCTTC+CGG 0.492961 5_3:+12914713 None:intergenic
GTCTCGTTCTCTGCGATCGC+CGG 0.493648 5_3:-12917398 Msa0799640:intron
TTCTTGATCTGCTTCGGCGG+AGG 0.494190 5_3:+12917462 None:intergenic
ACAATTAGAGATTTCTGTTG+AGG 0.494879 5_3:+12915337 None:intergenic
ATGAAAATTTGGGGTCAGAA+AGG 0.495655 5_3:+12911173 None:intergenic
GATGAATCCGTTAGGAGCAA+TGG 0.495944 5_3:-12912610 Msa0799640:CDS
AACGAAATGCAAACACGAGT+TGG 0.499133 5_3:-12911718 Msa0799640:CDS
GAATCACACCAACAAATTAA+GGG 0.500251 5_3:-12912521 Msa0799640:CDS
ACATGGAAATGGAAATGGAC+TGG 0.500309 5_3:+12917880 None:intergenic
TTTAGGAGCCAATGTTGCAT+TGG 0.503048 5_3:-12912761 Msa0799640:CDS
ATTTCGATGACAAGAGCAGC+TGG 0.503366 5_3:-12915744 Msa0799640:CDS
CACGCCGGATGATACGCTTT+AGG 0.504465 5_3:+12917160 None:intergenic
TGCCCAGGGAAATAAGGAAA+TGG 0.504537 5_3:-12915945 Msa0799640:intron
ACTCGCTGCCCTTTGGGCAG+AGG 0.505416 5_3:+12911470 None:intergenic
CCTCCATTACCAACACCAAA+TGG 0.507490 5_3:+12911503 None:intergenic
TTTATGAAAGTGGGTACTGT+AGG 0.507920 5_3:-12911439 Msa0799640:CDS
AACAAATTAAGGGAGGATCA+TGG 0.508647 5_3:-12912511 Msa0799640:CDS
ACAAATTAAGGGAGGATCAT+GGG 0.508655 5_3:-12912510 Msa0799640:CDS
CATCTCCACTTATCTCTACA+GGG 0.508658 5_3:-12913029 Msa0799640:CDS
ATCCGTAACATATCTGTAGT+TGG 0.508677 5_3:-12911343 Msa0799640:three_prime_UTR
GAGAAATTCTAAAGTTGATG+TGG 0.508829 5_3:-12911894 Msa0799640:CDS
TCTTCCGTTCAAAAGCCAAA+TGG 0.509901 5_3:-12917117 Msa0799640:CDS
CTCCGCCGCGGTCTCCGTAA+CGG 0.511292 5_3:+12917653 None:intergenic
GAGAGACGGCGGTTGTTGTA+CGG 0.511402 5_3:-12917577 Msa0799640:CDS
TTTGTCATCCAATGCAACAT+TGG 0.511832 5_3:+12912753 None:intergenic
AACTGCAACGGAGACAGTTC+CGG 0.512031 5_3:-12917691 Msa0799640:CDS
AGGAAAGAAGTAAATGGTAA+AGG 0.514336 5_3:+12913963 None:intergenic
TTGTTTGGAAAAGCTCGTCT+TGG 0.514641 5_3:-12915292 Msa0799640:CDS
CCATTTGGTGTTGGTAATGG+AGG 0.516121 5_3:-12911503 Msa0799640:CDS
AAAGTGGGTACTGTAGGAAA+GGG 0.516641 5_3:-12911433 Msa0799640:CDS
AATCGTGAGTGAGCAATAGT+AGG 0.518532 5_3:-12918064 Msa0799640:five_prime_UTR
TTTCCGAGCCTGACTCCCAC+TGG 0.518669 5_3:+12911843 None:intergenic
GAAAACACCGGCAACTGCAA+CGG 0.519194 5_3:-12917703 Msa0799640:CDS
GACACTTGACTAGTACTGCC+AGG 0.521563 5_3:+12911296 None:intergenic
TACTATTGCTCACTCACGAT+TGG 0.522522 5_3:+12918066 None:intergenic
GCTGATTGAGAACAGTGCCC+AGG 0.522778 5_3:-12915960 Msa0799640:CDS
AGACAACTCAGGGCAATCTT+CGG 0.526028 5_3:-12912386 Msa0799640:CDS
TCATTCATAAAATCATCAAA+TGG 0.527514 5_3:+12912997 None:intergenic
AGCCAACTACAGATATGTTA+CGG 0.527767 5_3:+12911341 None:intergenic
TCCTTCTTGATCTGCTTCGG+CGG 0.529690 5_3:+12917459 None:intergenic
AAATTCTCAGAAAAGGCAGT+TGG 0.530404 5_3:+12912550 None:intergenic
GCGGTCTCCGTAACGGCCAC+CGG 0.530407 5_3:+12917660 None:intergenic
ATGACAGCGAGAACTACTTT+CGG 0.532438 5_3:+12917552 None:intergenic
ACACCTGGAATGGGGAGGAA+TGG 0.534911 5_3:-12911744 Msa0799640:CDS
CCAGGAAAACCCCGATCTCT+GGG 0.536704 5_3:+12911581 None:intergenic
TGTACGTATTCTTTGTGCAA+GGG 0.539143 5_3:-12916058 Msa0799640:CDS
ATGGTAAAGATGAATCCGTT+AGG 0.539201 5_3:-12912618 Msa0799640:CDS
AAATCAAATCCCAGCTTAAG+TGG 0.540274 5_3:+12912277 None:intergenic
GAAAGTGGGTACTGTAGGAA+AGG 0.542249 5_3:-12911434 Msa0799640:CDS
TTTGGCAGAAGTGGAGGCAA+TGG 0.543632 5_3:-12912161 Msa0799640:CDS
AAGAGATCTCTATCAAGCTA+GGG 0.544078 5_3:+12917961 None:intergenic
CTCCATACTTTGAGATCTGG+AGG 0.545239 5_3:+12912883 None:intergenic
CTTAGTCCAATGCTTGATGC+AGG 0.546756 5_3:-12912043 Msa0799640:CDS
TGCTTCATTTGCTTCGACGG+TGG 0.548926 5_3:-12917423 Msa0799640:CDS
GGACCTTCAGGCGGTGACAC+GGG 0.549683 5_3:-12915508 Msa0799640:CDS
GACTGGGTTCAGATGTAAGA+AGG 0.551185 5_3:+12917897 None:intergenic
GTGCAAGAGATGGGCATCAA+AGG 0.552347 5_3:-12915470 Msa0799640:CDS
TCTGGTGGTCAGAGTAATAG+TGG 0.552718 5_3:-12912439 Msa0799640:CDS
GGGGATAGCCAAACAAGATA+CGG 0.553183 5_3:-12911623 Msa0799640:CDS
TTGACATCTGCTTGTTGTAA+CGG 0.553275 5_3:+12911953 None:intergenic
TCATGGGTGGAAGTATTCAC+AGG 0.553606 5_3:+12911406 None:intergenic
TTCATCTTTACCATTAGACT+GGG 0.555707 5_3:+12912627 None:intergenic
CACGTAGTTGCATTGCATGC+TGG 0.557373 5_3:+12912235 None:intergenic
GGCATTATCAGGATCCATCT+GGG 0.561353 5_3:-12912966 Msa0799640:CDS
TATGAGTCTGATGAAGATGC+TGG 0.561952 5_3:-12913377 Msa0799640:CDS
TTTAAATTTAAACCGGAAGG+AGG 0.562088 5_3:-12914725 Msa0799640:CDS
ATGTACGTATTCTTTGTGCA+AGG 0.562282 5_3:-12916059 Msa0799640:CDS
GGTGTCTTCAATGGTGTTGG+GGG 0.563493 5_3:-12913198 Msa0799640:CDS
AGAAATTCTAAAGTTGATGT+GGG 0.563983 5_3:-12911893 Msa0799640:CDS
GTGGAGGCAATGGAATCGCT+TGG 0.564327 5_3:-12912151 Msa0799640:CDS
AAGCGCGGTCGTCCGGCGAA+AGG 0.564717 5_3:-12917501 Msa0799640:CDS
GGGACCTTCAGGCGGTGACA+CGG 0.565507 5_3:-12915509 Msa0799640:CDS
ACGGCCACCGGAACTGTCGC+CGG 0.565692 5_3:+12917672 None:intergenic
CTACGTTTCATGATTGAAGT+GGG 0.566724 5_3:+12912115 None:intergenic
AGTTGCATTGCATGCTGGAG+GGG 0.567218 5_3:+12912240 None:intergenic
CATGGAAATGGAAATGGACT+GGG 0.568147 5_3:+12917881 None:intergenic
AAGAAAGCAGTCAGGATGGT+GGG 0.568241 5_3:-12912732 Msa0799640:CDS
CTTTGCTTGAGTGCAAGAGA+TGG 0.568824 5_3:-12915480 Msa0799640:CDS
AGGCAACCGCCATTTGGTGT+TGG 0.569763 5_3:-12911512 Msa0799640:CDS
AGAGAAAATAAAGGTTTGTG+TGG 0.570122 5_3:-12916004 Msa0799640:CDS
TAACCAGTGGGAGTCAGGCT+CGG 0.570435 5_3:-12911846 Msa0799640:CDS
CGGGATAGAGCAAGTGAGAA+GGG 0.572104 5_3:-12914002 Msa0799640:CDS
GGATGACAAAGAAAGCAGTC+AGG 0.572470 5_3:-12912740 Msa0799640:CDS
TCGTATAGACCTCTGCCCAA+AGG 0.573598 5_3:-12911479 Msa0799640:CDS
TATTGGAAGCTGAGAAATTG+CGG 0.573970 5_3:-12914037 Msa0799640:CDS
TGCGTCAAAGTATAAAGTAT+GGG 0.574180 5_3:-12914536 Msa0799640:CDS
ACATCGGAAACAGCCTTCGT+CGG 0.576936 5_3:+12917612 None:intergenic
TTTGCTTGAGTGCAAGAGAT+GGG 0.577813 5_3:-12915479 Msa0799640:CDS
TTCCTAAATATGCTAAACTG+TGG 0.578015 5_3:-12913945 Msa0799640:CDS
GCAAGTTGAAGTTCCGACGA+AGG 0.578052 5_3:-12917625 Msa0799640:CDS
GCATGACTGTAGACACCACT+TGG 0.578287 5_3:-12911787 Msa0799640:CDS
ATTTGATTCTATATCTACAC+AGG 0.578615 5_3:+12915555 None:intergenic
GCAATCCCTGTAGAGATAAG+TGG 0.578905 5_3:+12913024 None:intergenic
GCTCTGCCTCTAACTAAACC+TGG 0.580099 5_3:+12911545 None:intergenic
ATGCCATCCATTGCTCCTAA+CGG 0.581344 5_3:+12912603 None:intergenic
TCACCGCCTGAAGGTCCCTT+AGG 0.581612 5_3:+12915514 None:intergenic
CTGATTGAGAACAGTGCCCA+GGG 0.582372 5_3:-12915959 Msa0799640:CDS
GTCTGACTGATGATAGTGAA+AGG 0.583848 5_3:-12914997 Msa0799640:CDS
ACTACGTTTCATGATTGAAG+TGG 0.584103 5_3:+12912114 None:intergenic
ATCTCAATCTACAGCAGCAG+AGG 0.584635 5_3:-12911978 Msa0799640:CDS
GCAAACACGAGTTGGGGAGT+AGG 0.584654 5_3:-12911710 Msa0799640:CDS
TTGTCCTAAAGCGTATCATC+CGG 0.585341 5_3:-12917164 Msa0799640:CDS
TAGTGAAAGGATTCACGAGA+AGG 0.590332 5_3:-12914984 Msa0799640:CDS
GGTCCTTGAACCTTCCCAGA+TGG 0.590343 5_3:+12912952 None:intergenic
ACATTAACTTGATCTACTTG+CGG 0.590461 5_3:-12915036 Msa0799640:CDS
TCCTAAATATGCTAAACTGT+GGG 0.593025 5_3:-12913944 Msa0799640:intron
TCGGGATAGAGCAAGTGAGA+AGG 0.596969 5_3:-12914003 Msa0799640:CDS
AATAGGCTGTTGTTCCGCAA+TGG 0.597034 5_3:+12912790 None:intergenic
CCTGGTTCCCTACCATGACC+AGG 0.598011 5_3:+12911563 None:intergenic
CAGATAGTGAAGACAACTCA+GGG 0.598737 5_3:-12912396 Msa0799640:CDS
GTACGTATTCTTTGTGCAAG+GGG 0.599465 5_3:-12916057 Msa0799640:CDS
AGAAGTGTCTAGTGTTGCAG+TGG 0.601945 5_3:-12913058 Msa0799640:CDS
ATCAACTTTAGAATTTCTCG+AGG 0.603272 5_3:+12911898 None:intergenic
CTAATGGGATCCAAAATCAT+GGG 0.603693 5_3:+12911390 None:intergenic
CTCAGAAACATGAGCCGATG+TGG 0.603967 5_3:+12912312 None:intergenic
CTGTATAAGTGGAATGCAAG+TGG 0.605595 5_3:-12912913 Msa0799640:CDS
ACAACTCGAACTATTTGTTG+AGG 0.605762 5_3:+12911090 None:intergenic
TAGTTGCATTGCATGCTGGA+GGG 0.605974 5_3:+12912239 None:intergenic
ACTTTCGGAGTTCCTTTCGC+CGG 0.606950 5_3:+12917489 None:intergenic
GACAAAGAAAGCAGTCAGGA+TGG 0.607040 5_3:-12912736 Msa0799640:CDS
AAGTTCACATACCTACAACT+TGG 0.607330 5_3:+12914894 None:intergenic
TGGATTGGAAAGTACACACC+TGG 0.609215 5_3:-12911759 Msa0799640:CDS
GAGGCAATGGAATCGCTTGG+TGG 0.610924 5_3:-12912148 Msa0799640:CDS
TGTAGTAACTCCAAGCTTTG+GGG 0.611671 5_3:-12911642 Msa0799640:CDS
TAGAAGTGTGTACATGTGAC+TGG 0.616630 5_3:+12912578 None:intergenic
AAAGAAAGCAGTCAGGATGG+TGG 0.617264 5_3:-12912733 Msa0799640:CDS
CGAAATGCAAACACGAGTTG+GGG 0.617307 5_3:-12911716 Msa0799640:CDS
TCAGATAGTGAAGACAACTC+AGG 0.618147 5_3:-12912397 Msa0799640:CDS
CAATTGCTTGGATACCACAT+CGG 0.619651 5_3:-12912326 Msa0799640:CDS
CGTAGTGAGGAATTGACTGA+TGG 0.621062 5_3:-12912097 Msa0799640:CDS
GAGTTGGGGAGTAGGACATA+CGG 0.621523 5_3:-12911702 Msa0799640:CDS
AGAACATCACCACTTAAGCT+GGG 0.624830 5_3:-12912286 Msa0799640:CDS
GACTCAAACAGGACTTCTGG+TGG 0.627249 5_3:-12912454 Msa0799640:CDS
AACTTGCTTCGTCTCCGCCG+CGG 0.631018 5_3:+12917641 None:intergenic
GTGAACATGACGGAGAGAGA+CGG 0.631033 5_3:-12917591 Msa0799640:CDS
ACAATCAAAGCCGAAAACAC+CGG 0.631670 5_3:-12917715 Msa0799640:CDS
CTCCAGATCTCAAAGTATGG+AGG 0.636299 5_3:-12912882 Msa0799640:CDS
TTATCAGGATCCATCTGGGA+AGG 0.637004 5_3:-12912962 Msa0799640:CDS
AAGAATAAAATGAAAATTTG+GGG 0.637103 5_3:+12911164 None:intergenic
TTTCGATGACAAGAGCAGCT+GGG 0.637251 5_3:-12915743 Msa0799640:CDS
ATGGGATCCAAAATCATGGG+TGG 0.640005 5_3:+12911393 None:intergenic
TCCGCCGAAGCAGATCAAGA+AGG 0.640783 5_3:-12917460 Msa0799640:CDS
GTAGTTGCATTGCATGCTGG+AGG 0.641336 5_3:+12912238 None:intergenic
AGTTCCGGCGACAGTTCCGG+TGG 0.643876 5_3:-12917676 Msa0799640:CDS
TCAAAAGCCAAATGGAATTG+CGG 0.644100 5_3:-12917109 Msa0799640:intron
TTCAATCATGAAACGTAGTG+AGG 0.644665 5_3:-12912110 Msa0799640:CDS
ACACCCGTGTCACCGCCTGA+AGG 0.645434 5_3:+12915505 None:intergenic
TCATCATCAAAGAATATCAG+AGG 0.650447 5_3:-12911927 Msa0799640:CDS
ATGTGTTTCAAGTAACCAGT+GGG 0.650974 5_3:-12911858 Msa0799640:CDS
GAGTCAGATGGCAATAAACA+AGG 0.652111 5_3:-12913353 Msa0799640:intron
TCCATACTTTGAGATCTGGA+GGG 0.653191 5_3:+12912884 None:intergenic
TAGTAACTGTAAATCACATG+TGG 0.653829 5_3:+12912000 None:intergenic
AATCCGTTAGGAGCAATGGA+TGG 0.654526 5_3:-12912606 Msa0799640:CDS
ATTGAGTTGAGTTTGCGTGA+GGG 0.656214 5_3:+12917833 None:intergenic
TAGTTAGAGGCAGAGCTGCG+TGG 0.657531 5_3:-12911538 Msa0799640:CDS
AAAGTGAAAACCCTAACACA+TGG 0.657958 5_3:+12917863 None:intergenic
GAAGATGCTGGAGAGTCAGA+TGG 0.658657 5_3:-12913365 Msa0799640:CDS
GAAAGTACACACCTGGAATG+GGG 0.660607 5_3:-12911752 Msa0799640:CDS
GTGCGGATAAGAATCTCTAG+TGG 0.660680 5_3:-12914947 Msa0799640:CDS
TAATTGTGCAGGTACAAGCA+AGG 0.661666 5_3:-12914800 Msa0799640:intron
AATTGAGTTGAGTTTGCGTG+AGG 0.661978 5_3:+12917832 None:intergenic
TTCCAATCCAAGTCTCCAAG+TGG 0.667946 5_3:+12911772 None:intergenic
TGATGCTGTTGCAAATGGAA+AGG 0.670038 5_3:-12915182 Msa0799640:CDS
AAGCCTAAGGGACCTTCAGG+CGG 0.671021 5_3:-12915517 Msa0799640:CDS
TGCTGTTGCAAATGGAAAGG+AGG 0.671749 5_3:-12915179 Msa0799640:CDS
CATACAATGAATCCAAATTG+GGG 0.672918 5_3:+12913396 None:intergenic
AGTCATGCCCAATGTTGCAG+TGG 0.673187 5_3:+12911802 None:intergenic
TCATCTCGCTTGACACACGC+CGG 0.676664 5_3:+12917145 None:intergenic
TATGTGTTTCAAGTAACCAG+TGG 0.677699 5_3:-12911859 Msa0799640:CDS
GCTTTCAAAGAGATTGACTG+TGG 0.679086 5_3:-12914514 Msa0799640:intron
GGCCGTTACGGAGACCGCGG+CGG 0.679201 5_3:-12917655 Msa0799640:CDS
CACTCACGATTGGTTCAATG+TGG 0.681230 5_3:+12918076 None:intergenic
TGTTTCCGATGTGAACATGA+CGG 0.681488 5_3:-12917601 Msa0799640:CDS
TCTCTCCGTCATGTTCACAT+CGG 0.681784 5_3:+12917596 None:intergenic
AAGTGGGTACTGTAGGAAAG+GGG 0.681811 5_3:-12911432 Msa0799640:CDS
TCACACCAACAAATTAAGGG+AGG 0.689313 5_3:-12912518 Msa0799640:CDS
AAAGCAGTCAGGATGGTGGG+AGG 0.690722 5_3:-12912729 Msa0799640:CDS
GGTGGCCGTTACGGAGACCG+CGG 0.699489 5_3:-12917658 Msa0799640:CDS
AGTACACACCTGGAATGGGG+AGG 0.705466 5_3:-12911749 Msa0799640:CDS
CAGCATGCAATGCAACTACG+TGG 0.709858 5_3:-12912234 Msa0799640:CDS
CCATTACCAACACCAAATGG+CGG 0.710852 5_3:+12911506 None:intergenic
TTCGAATCAGGAGTTCTCCG+AGG 0.712977 5_3:-12914683 Msa0799640:intron
AACATGACGGAGAGAGACGG+CGG 0.721172 5_3:-12917588 Msa0799640:CDS
GAGGTTATGAAGAAGAAGCG+CGG 0.742865 5_3:-12917516 Msa0799640:CDS
TGTCATCGCCGAGAACAGTG+AGG 0.750277 5_3:-12917535 Msa0799640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGAAATTTTAAATTTAAAC+CGG - chr5_3:12914467-12914486 Msa0799640:intron 10.0%
!! ATCAATAATCATGAATAATT+AGG + chr5_3:12911411-12911430 None:intergenic 15.0%
!!! TTTGAATATACATGATTTTT+AGG + chr5_3:12912664-12912683 None:intergenic 15.0%
!! ATGTATATTCAAACATAATT+TGG - chr5_3:12912671-12912690 Msa0799640:CDS 15.0%
!!! ATTTTCTTTTATAAGAAAGT+GGG + chr5_3:12913962-12913981 None:intergenic 15.0%
!!! TATTTTCTTTTATAAGAAAG+TGG + chr5_3:12913963-12913982 None:intergenic 15.0%
!!! GTAAATTTTCTTTTTTTATC+TGG - chr5_3:12914842-12914861 Msa0799640:intron 15.0%
!! AAACTTTATGTTTCATTTAT+TGG + chr5_3:12915347-12915366 None:intergenic 15.0%
!!! CAATTTTTTAACAAAGAATT+AGG - chr5_3:12915567-12915586 Msa0799640:CDS 15.0%
!!! TTTGTAAATTTTATGAAAGT+GGG - chr5_3:12917751-12917770 Msa0799640:five_prime_UTR 15.0%
!! AAGAATAAAATGAAAATTTG+GGG + chr5_3:12918038-12918057 None:intergenic 15.0%
!! CAAGAATAAAATGAAAATTT+GGG + chr5_3:12918039-12918058 None:intergenic 15.0%
!! ACAAGAATAAAATGAAAATT+TGG + chr5_3:12918040-12918059 None:intergenic 15.0%
!!! GATAATTTTGGTAATTTTGT+GGG + chr5_3:12911272-12911291 None:intergenic 20.0%
!!! TGATAATTTTGGTAATTTTG+TGG + chr5_3:12911273-12911292 None:intergenic 20.0%
!! AATAAAAAAATCGAATCGAA+TGG + chr5_3:12911458-12911477 None:intergenic 20.0%
!!! CGATTCGATTTTTTTATTTA+TGG - chr5_3:12911460-12911479 Msa0799640:CDS 20.0%
!!! AGAATGGAATAATTTTGAAT+TGG - chr5_3:12911845-12911864 Msa0799640:CDS 20.0%
!! TTATAGATTCTATCTTAGAT+TGG - chr5_3:12911900-12911919 Msa0799640:CDS 20.0%
!! ATTAAACCTAAAGAACAAAA+CGG + chr5_3:12912136-12912155 None:intergenic 20.0%
!! AGTAATTATTTACATGCAAT+TGG - chr5_3:12912176-12912195 Msa0799640:CDS 20.0%
!!! ATTTTATTTGTGATATTGCT+TGG - chr5_3:12912199-12912218 Msa0799640:CDS 20.0%
!!! GTCTATTTTTGAAAAAATTG+TGG - chr5_3:12912705-12912724 Msa0799640:CDS 20.0%
!! GTTATTCATTAATCATCTAT+TGG - chr5_3:12912791-12912810 Msa0799640:CDS 20.0%
!!! TTTTCTTTTATAAGAAAGTG+GGG + chr5_3:12913961-12913980 None:intergenic 20.0%
!!! AATTTTAAATTTAAACCGGA+AGG - chr5_3:12914471-12914490 Msa0799640:intron 20.0%
!! AAATAATTTCCTATTTACCT+CGG + chr5_3:12914536-12914555 None:intergenic 20.0%
!!! ATTTTGTATGAGGTTTATAA+TGG - chr5_3:12914748-12914767 Msa0799640:CDS 20.0%
!! AATAACTACATCAATAAAAG+AGG + chr5_3:12915146-12915165 None:intergenic 20.0%
!!! TCTTTTATTGATGTAGTTAT+TGG - chr5_3:12915145-12915164 Msa0799640:CDS 20.0%
!! ATATTTAGGAAAGAAGTAAA+TGG + chr5_3:12915245-12915264 None:intergenic 20.0%
!!! GCAAGAAATAAATTTTAACA+TGG - chr5_3:12915597-12915616 Msa0799640:CDS 20.0%
!! CATATACATAATCATAGTTA+CGG + chr5_3:12915943-12915962 None:intergenic 20.0%
!! TCATTCATAAAATCATCAAA+TGG + chr5_3:12916205-12916224 None:intergenic 20.0%
!!! ATTTTATGAATGATAGATCA+TGG - chr5_3:12916212-12916231 Msa0799640:intron 20.0%
!!! GTTTGTAAATTTTATGAAAG+TGG - chr5_3:12917750-12917769 Msa0799640:five_prime_UTR 20.0%
! TATTAAATGAATCTGCAAAG+TGG + chr5_3:12912372-12912391 None:intergenic 25.0%
! CATTTAATAACTAATGTACC+TGG - chr5_3:12912383-12912402 Msa0799640:CDS 25.0%
! AGCATATGGTTAAATTAGTT+CGG - chr5_3:12912482-12912501 Msa0799640:CDS 25.0%
! ATGGTCACTTAAATCTAAAA+AGG - chr5_3:12912508-12912527 Msa0799640:CDS 25.0%
! AAATCGTTGTTAATTGTGTT+TGG + chr5_3:12912557-12912576 None:intergenic 25.0%
! AAACATACACTTGAAAATCA+TGG + chr5_3:12912593-12912612 None:intergenic 25.0%
! GTTAACACAATTCAAATATG+TGG + chr5_3:12912827-12912846 None:intergenic 25.0%
! GTGATAGATTTCTCAAAATA+AGG + chr5_3:12912979-12912998 None:intergenic 25.0%
! GCAAAAAGAAAGTCTATTAA+AGG + chr5_3:12913059-12913078 None:intergenic 25.0%
! ACATGTATAGCACATATAAT+GGG + chr5_3:12913124-12913143 None:intergenic 25.0%
! TACATGTATAGCACATATAA+TGG + chr5_3:12913125-12913144 None:intergenic 25.0%
! GTTTCTGTTAGAGAAAATAA+AGG - chr5_3:12913186-12913205 Msa0799640:CDS 25.0%
!! TTTAAGATGGTAAAGTTTGT+GGG + chr5_3:12913596-12913615 None:intergenic 25.0%
! TACCATCTTAAAGATGAAAA+AGG - chr5_3:12913604-12913623 Msa0799640:intron 25.0%
!!! AACCTTTTTCATCTTTAAGA+TGG + chr5_3:12913609-12913628 None:intergenic 25.0%
! ATTTGATTCTATATCTACAC+AGG + chr5_3:12913647-12913666 None:intergenic 25.0%
! TTTGTCTCACATATGAAAAA+TGG - chr5_3:12913763-12913782 Msa0799640:intron 25.0%
!! TCTAGACTAGTAAATTTGTT+TGG - chr5_3:12913892-12913911 Msa0799640:intron 25.0%
!!! TATGCATCTTGATTATTTTG+TGG + chr5_3:12914123-12914142 None:intergenic 25.0%
! AATATATTTATCCTATGTCC+AGG - chr5_3:12914625-12914644 Msa0799640:intron 25.0%
! ACAAAATATAGCATACTTCA+TGG + chr5_3:12914735-12914754 None:intergenic 25.0%
!! AGTATGCTATATTTTGTATG+AGG - chr5_3:12914738-12914757 Msa0799640:CDS 25.0%
! TGGTTTAGTAATCTGATTTA+CGG - chr5_3:12914862-12914881 Msa0799640:intron 25.0%
! AGCATGGCATTAAATTATTT+AGG + chr5_3:12914966-12914985 None:intergenic 25.0%
! TAAGTAACATTTCAAAAGCA+TGG + chr5_3:12914982-12915001 None:intergenic 25.0%
!!! TGAATGCCTCTTTTTTTTTT+TGG - chr5_3:12915105-12915124 Msa0799640:CDS 25.0%
! TTTCCACCAAAAAAAAAAAG+AGG + chr5_3:12915114-12915133 None:intergenic 25.0%
! AAAGAATAACCAACAAAAAG+GGG + chr5_3:12915473-12915492 None:intergenic 25.0%
! GAAAGAATAACCAACAAAAA+GGG + chr5_3:12915474-12915493 None:intergenic 25.0%
! AGAAAGAATAACCAACAAAA+AGG + chr5_3:12915475-12915494 None:intergenic 25.0%
! TCATACAATGAATCCAAATT+GGG + chr5_3:12915807-12915826 None:intergenic 25.0%
! TATGATTATGTATATGCAGA+TGG - chr5_3:12915947-12915966 Msa0799640:CDS 25.0%
!! GAAAAAAACTCTGAAGATAA+TGG - chr5_3:12916715-12916734 Msa0799640:intron 25.0%
!!! TGGAAGAAGTATTTACATTA+TGG + chr5_3:12916855-12916874 None:intergenic 25.0%
!!! AGAAATTCTAAAGTTGATGT+GGG - chr5_3:12917306-12917325 Msa0799640:intron 25.0%
! CCAGGTTAAATTACAATAAT+TGG + chr5_3:12917888-12917907 None:intergenic 25.0%
! CCAATTATTGTAATTTAACC+TGG - chr5_3:12917885-12917904 Msa0799640:five_prime_UTR 25.0%
ATTTCCATTTCCATGTGTTA+GGG - chr5_3:12911326-12911345 Msa0799640:three_prime_UTR 30.0%
! TTCTCTCTCTTTTCATTTCT+AGG - chr5_3:12912010-12912029 Msa0799640:CDS 30.0%
! TCTCTCTCTTTTCATTTCTA+GGG - chr5_3:12912011-12912030 Msa0799640:CDS 30.0%
!!! AATTCCATTTGGCTTTTGAA+CGG + chr5_3:12912089-12912108 None:intergenic 30.0%
!! CTTAAACCGTTTTGTTCTTT+AGG - chr5_3:12912127-12912146 Msa0799640:CDS 30.0%
TGTTTGTAATAGTGACACAA+GGG + chr5_3:12912344-12912363 None:intergenic 30.0%
TTGTTTGTAATAGTGACACA+AGG + chr5_3:12912345-12912364 None:intergenic 30.0%
TCTGATATGTATTATAGACC+AGG + chr5_3:12912404-12912423 None:intergenic 30.0%
! TTTTGTGTAATAATGACCAG+AGG - chr5_3:12912458-12912477 Msa0799640:CDS 30.0%
TTTGTGTAATAATGACCAGA+GGG - chr5_3:12912459-12912478 Msa0799640:CDS 30.0%
ATATGGTTAAATTAGTTCGG+TGG - chr5_3:12912485-12912504 Msa0799640:CDS 30.0%
CACTTAAATCTAAAAAGGTG+CGG - chr5_3:12912513-12912532 Msa0799640:CDS 30.0%
CACTTGAAAATCATGGTTAA+TGG + chr5_3:12912586-12912605 None:intergenic 30.0%
! GCTAATGATGTTTAAAGTTG+TGG - chr5_3:12912727-12912746 Msa0799640:CDS 30.0%
CTAATCGGCAAATTAACAAA+TGG + chr5_3:12912944-12912963 None:intergenic 30.0%
AGAGAAAATAAAGGTTTGTG+TGG - chr5_3:12913195-12913214 Msa0799640:CDS 30.0%
GCAAATGAAATGATACATGA+TGG - chr5_3:12913390-12913409 Msa0799640:CDS 30.0%
!! AGTATCTTTTCAAGGTGTAT+TGG - chr5_3:12913479-12913498 Msa0799640:intron 30.0%
!! CTTTAAGATGGTAAAGTTTG+TGG + chr5_3:12913597-12913616 None:intergenic 30.0%
CTTAAAGATGAAAAAGGTTC+TGG - chr5_3:12913610-12913629 Msa0799640:intron 30.0%
TTTGAAAAACAAGAAGCCTA+AGG - chr5_3:12913669-12913688 Msa0799640:intron 30.0%
TTGAAAAACAAGAAGCCTAA+GGG - chr5_3:12913670-12913689 Msa0799640:intron 30.0%
CAATTAGAGATTTCTGTTGA+GGG + chr5_3:12913864-12913883 None:intergenic 30.0%
ACAATTAGAGATTTCTGTTG+AGG + chr5_3:12913865-12913884 None:intergenic 30.0%
! TCCAAAATTATTTTCTGCAG+GGG + chr5_3:12913986-12914005 None:intergenic 30.0%
! CTCCAAAATTATTTTCTGCA+GGG + chr5_3:12913987-12914006 None:intergenic 30.0%
TAAGAGATGCACAAGTAAAA+AGG - chr5_3:12914083-12914102 Msa0799640:intron 30.0%
! ACATTAACTTGATCTACTTG+CGG - chr5_3:12914163-12914182 Msa0799640:intron 30.0%
CAATGTGTAAAAATTCACTG+AGG + chr5_3:12914346-12914365 None:intergenic 30.0%
!! TCACGTCTTGAAATTAGTTT+TGG - chr5_3:12914372-12914391 Msa0799640:intron 30.0%
TTTAAATTTAAACCGGAAGG+AGG - chr5_3:12914474-12914493 Msa0799640:intron 30.0%
TTGCGTCAAAGTATAAAGTA+TGG - chr5_3:12914662-12914681 Msa0799640:intron 30.0%
TGCGTCAAAGTATAAAGTAT+GGG - chr5_3:12914663-12914682 Msa0799640:intron 30.0%
GGCATTAAATTATTTAGGCA+TGG + chr5_3:12914961-12914980 None:intergenic 30.0%
AATTCAATTCAGATGGCATT+TGG + chr5_3:12915012-12915031 None:intergenic 30.0%
!!! ATGCCTCTTTTTTTTTTTGG+TGG - chr5_3:12915108-12915127 Msa0799640:CDS 30.0%
AATTGCGGCTTAATAATCTT+CGG - chr5_3:12915177-12915196 Msa0799640:CDS 30.0%
AGGAAAGAAGTAAATGGTAA+AGG + chr5_3:12915239-12915258 None:intergenic 30.0%
TTCCTAAATATGCTAAACTG+TGG - chr5_3:12915254-12915273 Msa0799640:CDS 30.0%
TCCTAAATATGCTAAACTGT+GGG - chr5_3:12915255-12915274 Msa0799640:CDS 30.0%
!! TATTTTTACCCCCTTTTTGT+TGG - chr5_3:12915461-12915480 Msa0799640:CDS 30.0%
AAGAATAACCAACAAAAAGG+GGG + chr5_3:12915472-12915491 None:intergenic 30.0%
ACTGAATGAATAAGCAGAAA+AGG + chr5_3:12915676-12915695 None:intergenic 30.0%
CATACAATGAATCCAAATTG+GGG + chr5_3:12915806-12915825 None:intergenic 30.0%
CTCATACAATGAATCCAAAT+TGG + chr5_3:12915808-12915827 None:intergenic 30.0%
AAACTTGAAAACAAACTCAG+TGG + chr5_3:12915887-12915906 None:intergenic 30.0%
! TACCTATTTTCTCCAGAATT+TGG - chr5_3:12915975-12915994 Msa0799640:CDS 30.0%
! ACCTATTTTCTCCAGAATTT+GGG - chr5_3:12915976-12915995 Msa0799640:CDS 30.0%
GTAAGCATGTATTCTCAATT+GGG + chr5_3:12916057-12916076 None:intergenic 30.0%
AGTAAGCATGTATTCTCAAT+TGG + chr5_3:12916058-12916077 None:intergenic 30.0%
TTGTTAACTGATGCACTTAA+TGG - chr5_3:12916367-12916386 Msa0799640:intron 30.0%
TGTTAACTGATGCACTTAAT+GGG - chr5_3:12916368-12916387 Msa0799640:intron 30.0%
TTCATCTTTACCATTAGACT+GGG + chr5_3:12916575-12916594 None:intergenic 30.0%
ATTCATCTTTACCATTAGAC+TGG + chr5_3:12916576-12916595 None:intergenic 30.0%
CTCATTCAAATTCTCAGAAA+AGG + chr5_3:12916659-12916678 None:intergenic 30.0%
AGAATCACACCAACAAATTA+AGG - chr5_3:12916677-12916696 Msa0799640:intron 30.0%
GAATCACACCAACAAATTAA+GGG - chr5_3:12916678-12916697 Msa0799640:intron 30.0%
AAATACTTCTTCCAATTGCT+TGG - chr5_3:12916861-12916880 Msa0799640:intron 30.0%
! ACTGATTCATCAAAATCATC+TGG + chr5_3:12917009-12917028 None:intergenic 30.0%
! TGAATCAGTTTCAGATCTTT+TGG - chr5_3:12917020-12917039 Msa0799640:intron 30.0%
TAGTAACTGTAAATCACATG+TGG + chr5_3:12917202-12917221 None:intergenic 30.0%
TCATCATCAAAGAATATCAG+AGG - chr5_3:12917272-12917291 Msa0799640:intron 30.0%
!! ATCAACTTTAGAATTTCTCG+AGG + chr5_3:12917304-12917323 None:intergenic 30.0%
!! GAGAAATTCTAAAGTTGATG+TGG - chr5_3:12917305-12917324 Msa0799640:intron 30.0%
CGGATTACAAAAATCAAATG+CGG + chr5_3:12917841-12917860 None:intergenic 30.0%
AATGAGCAATCACATAAAAC+AGG + chr5_3:12917963-12917982 None:intergenic 30.0%
AAGAACATACCAGTACTAAT+TGG + chr5_3:12918067-12918086 None:intergenic 30.0%
!! AATTAGTACTGGTATGTTCT+TGG - chr5_3:12918066-12918085 Msa0799640:five_prime_UTR 30.0%
AAAAAGGAGTAATTAGAGGG+AGG - chr5_3:12911098-12911117 Msa0799640:three_prime_UTR 35.0%
GAAAGTAGAGAGAGAATATG+TGG + chr5_3:12911215-12911234 None:intergenic 35.0%
AAGAGATCTCTATCAAGCTA+GGG + chr5_3:12911241-12911260 None:intergenic 35.0%
! GGAGCTGTTTGTGATAATTT+TGG + chr5_3:12911284-12911303 None:intergenic 35.0%
CTAACACATGGAAATGGAAA+TGG + chr5_3:12911327-12911346 None:intergenic 35.0%
CATTTCCATTTCCATGTGTT+AGG - chr5_3:12911325-12911344 Msa0799640:three_prime_UTR 35.0%
AAAACCCTAACACATGGAAA+TGG + chr5_3:12911333-12911352 None:intergenic 35.0%
AAAGTGAAAACCCTAACACA+TGG + chr5_3:12911339-12911358 None:intergenic 35.0%
!! CTCTCTCTTTTCATTTCTAG+GGG - chr5_3:12912012-12912031 Msa0799640:CDS 35.0%
TCAAAAGCCAAATGGAATTG+CGG - chr5_3:12912090-12912109 Msa0799640:CDS 35.0%
TCGTTGTTAATTGTGTTTGG+TGG + chr5_3:12912554-12912573 None:intergenic 35.0%
AAGTTGTGGTTAATTGTGCT+TGG - chr5_3:12912741-12912760 Msa0799640:CDS 35.0%
GGTTAATTGTGCTTGGTAAA+TGG - chr5_3:12912748-12912767 Msa0799640:CDS 35.0%
TAAAGGAAAGCTGCACAATT+TGG + chr5_3:12913042-12913061 None:intergenic 35.0%
ATGTACGTATTCTTTGTGCA+AGG - chr5_3:12913140-12913159 Msa0799640:CDS 35.0%
TGTACGTATTCTTTGTGCAA+GGG - chr5_3:12913141-12913160 Msa0799640:CDS 35.0%
! CAAGGGGTGTATAAAAAATG+CGG - chr5_3:12913158-12913177 Msa0799640:CDS 35.0%
! TACCATTTCCTTATTTCCCT+GGG + chr5_3:12913259-12913278 None:intergenic 35.0%
! ATACCATTTCCTTATTTCCC+TGG + chr5_3:12913260-12913279 None:intergenic 35.0%
TTATAAGAAAGTGGGGTTCA+AGG + chr5_3:12913954-12913973 None:intergenic 35.0%
! ACCCCTGCAGAAAATAATTT+TGG - chr5_3:12913982-12914001 Msa0799640:CDS 35.0%
! GCTCCAAAATTATTTTCTGC+AGG + chr5_3:12913988-12914007 None:intergenic 35.0%
!!! GCAGAAAATAATTTTGGAGC+AGG - chr5_3:12913988-12914007 Msa0799640:CDS 35.0%
ATTAGTGATGCTGTTGCAAA+TGG - chr5_3:12914012-12914031 Msa0799640:CDS 35.0%
!! TCTTGATTATTTTGTGGCAC+AGG + chr5_3:12914117-12914136 None:intergenic 35.0%
TATAGACTTGTCCAAGTTGT+AGG - chr5_3:12914294-12914313 Msa0799640:intron 35.0%
AAGTTCACATACCTACAACT+TGG + chr5_3:12914308-12914327 None:intergenic 35.0%
! ATTCACTGAGGTATTAGATG+TGG + chr5_3:12914334-12914353 None:intergenic 35.0%
!! GTTTTGGTAACTAATTGTGC+AGG - chr5_3:12914388-12914407 Msa0799640:CDS 35.0%
GTTGCTGAACCTTACAAAAT+TGG - chr5_3:12914421-12914440 Msa0799640:intron 35.0%
! GTTCTTGTGCCAATTTTGTA+AGG + chr5_3:12914433-12914452 None:intergenic 35.0%
! CGAGTCTTCATATTTTGTAG+AGG - chr5_3:12914567-12914586 Msa0799640:intron 35.0%
! TAATGGCTGTCTTTGTTTGT+AGG - chr5_3:12914765-12914784 Msa0799640:CDS 35.0%
! AATGGCTGTCTTTGTTTGTA+GGG - chr5_3:12914766-12914785 Msa0799640:CDS 35.0%
CCTCACAAATTCAATTCAGA+TGG + chr5_3:12915019-12915038 None:intergenic 35.0%
CCATCTGAATTGAATTTGTG+AGG - chr5_3:12915016-12915035 Msa0799640:CDS 35.0%
TATTGGAAGCTGAGAAATTG+CGG - chr5_3:12915162-12915181 Msa0799640:CDS 35.0%
ATTGCGGCTTAATAATCTTC+GGG - chr5_3:12915178-12915197 Msa0799640:CDS 35.0%
ACCCACAGTTTAGCATATTT+AGG + chr5_3:12915259-12915278 None:intergenic 35.0%
!! GGGTACTGAATAATGCATAT+TGG - chr5_3:12915275-12915294 Msa0799640:CDS 35.0%
CTATCATAGGAAAACTGTGT+AGG - chr5_3:12915410-12915429 Msa0799640:CDS 35.0%
TGGATATGTTCAGCAATAAG+TGG - chr5_3:12915617-12915636 Msa0799640:CDS 35.0%
GGATATGTTCAGCAATAAGT+GGG - chr5_3:12915618-12915637 Msa0799640:CDS 35.0%
CATTCTTTAAGCGTGCAATT+TGG + chr5_3:12915705-12915724 None:intergenic 35.0%
! TCCCAAATTCTGGAGAAAAT+AGG + chr5_3:12915980-12915999 None:intergenic 35.0%
! ATTTTCTCCAGAATTTGGGA+TGG - chr5_3:12915980-12915999 Msa0799640:CDS 35.0%
CATCAATAGGAGTTTCGTTT+GGG + chr5_3:12916096-12916115 None:intergenic 35.0%
TCATCAATAGGAGTTTCGTT+TGG + chr5_3:12916097-12916116 None:intergenic 35.0%
ACATCAGCACTATCATCAAT+AGG + chr5_3:12916109-12916128 None:intergenic 35.0%
TGATAGATCATGGCATTATC+AGG - chr5_3:12916222-12916241 Msa0799640:intron 35.0%
TACAGCTGCAACATAGAAAA+AGG + chr5_3:12916271-12916290 None:intergenic 35.0%
TTTGTCATCCAATGCAACAT+TGG + chr5_3:12916449-12916468 None:intergenic 35.0%
CTCTGATCTGTTCTATGATT+CGG + chr5_3:12916528-12916547 None:intergenic 35.0%
ACAGATCAGAGAACAAAAAG+TGG - chr5_3:12916537-12916556 Msa0799640:intron 35.0%
ATGGTAAAGATGAATCCGTT+AGG - chr5_3:12916581-12916600 Msa0799640:intron 35.0%
AAATTCTCAGAAAAGGCAGT+TGG + chr5_3:12916652-12916671 None:intergenic 35.0%
!! ATGATCCTCCCTTAATTTGT+TGG + chr5_3:12916689-12916708 None:intergenic 35.0%
AACAAATTAAGGGAGGATCA+TGG - chr5_3:12916688-12916707 Msa0799640:intron 35.0%
ACAAATTAAGGGAGGATCAT+GGG - chr5_3:12916689-12916708 Msa0799640:intron 35.0%
ATGGAAATCATGACTCAAAC+AGG - chr5_3:12916734-12916753 Msa0799640:intron 35.0%
AAATCAAATCCCAGCTTAAG+TGG + chr5_3:12916925-12916944 None:intergenic 35.0%
CTACGTTTCATGATTGAAGT+GGG + chr5_3:12917087-12917106 None:intergenic 35.0%
ACTACGTTTCATGATTGAAG+TGG + chr5_3:12917088-12917107 None:intergenic 35.0%
TTCAATCATGAAACGTAGTG+AGG - chr5_3:12917089-12917108 Msa0799640:intron 35.0%
!! TTGACATCTGCTTGTTGTAA+CGG + chr5_3:12917249-12917268 None:intergenic 35.0%
! TATGTGTTTCAAGTAACCAG+TGG - chr5_3:12917340-12917359 Msa0799640:intron 35.0%
! ATGTGTTTCAAGTAACCAGT+GGG - chr5_3:12917341-12917360 Msa0799640:intron 35.0%
! TTTATGAAAGTGGGTACTGT+AGG - chr5_3:12917760-12917779 Msa0799640:five_prime_UTR 35.0%
! AATACTTCCACCCATGATTT+TGG - chr5_3:12917799-12917818 Msa0799640:five_prime_UTR 35.0%
CTAATGGGATCCAAAATCAT+GGG + chr5_3:12917812-12917831 None:intergenic 35.0%
! ATTTTGGATCCCATTAGCAT+TGG - chr5_3:12917815-12917834 Msa0799640:five_prime_UTR 35.0%
ATCCGTAACATATCTGTAGT+TGG - chr5_3:12917856-12917875 Msa0799640:five_prime_UTR 35.0%
AGCCAACTACAGATATGTTA+CGG + chr5_3:12917861-12917880 None:intergenic 35.0%
! ATGAAAATTTGGGGTCAGAA+AGG + chr5_3:12918029-12918048 None:intergenic 35.0%
CTTGTGTTACCAATTAGTAC+TGG - chr5_3:12918055-12918074 Msa0799640:five_prime_UTR 35.0%
TACTATTGCTCACTCACGAT+TGG + chr5_3:12911136-12911155 None:intergenic 40.0%
AATCGTGAGTGAGCAATAGT+AGG - chr5_3:12911135-12911154 Msa0799640:three_prime_UTR 40.0%
GAAGAGATCTCTATCAAGCT+AGG + chr5_3:12911242-12911261 None:intergenic 40.0%
! CATGGAAATGGAAATGGACT+GGG + chr5_3:12911321-12911340 None:intergenic 40.0%
ACATGGAAATGGAAATGGAC+TGG + chr5_3:12911322-12911341 None:intergenic 40.0%
!! ATTGAGTTGAGTTTGCGTGA+GGG + chr5_3:12911369-12911388 None:intergenic 40.0%
!! AATTGAGTTGAGTTTGCGTG+AGG + chr5_3:12911370-12911389 None:intergenic 40.0%
ACAATCAAAGCCGAAAACAC+CGG - chr5_3:12911484-12911503 Msa0799640:CDS 40.0%
TGTTTCCGATGTGAACATGA+CGG - chr5_3:12911598-12911617 Msa0799640:CDS 40.0%
ATGACAGCGAGAACTACTTT+CGG + chr5_3:12911650-12911669 None:intergenic 40.0%
CTTCATAACCTCACTGTTCT+CGG + chr5_3:12911675-12911694 None:intergenic 40.0%
TCTTCCTTCTTGATCTGCTT+CGG + chr5_3:12911746-12911765 None:intergenic 40.0%
GTTTGCTTCATTTGCTTCGA+CGG - chr5_3:12911773-12911792 Msa0799640:CDS 40.0%
GAGGGTTTAGCGATTAAGAA+TGG - chr5_3:12911829-12911848 Msa0799640:CDS 40.0%
TTGTCCTAAAGCGTATCATC+CGG - chr5_3:12912035-12912054 Msa0799640:CDS 40.0%
TCTTCCGTTCAAAAGCCAAA+TGG - chr5_3:12912082-12912101 Msa0799640:CDS 40.0%
!! CAAAGTACCGCAATTCCATT+TGG + chr5_3:12912100-12912119 None:intergenic 40.0%
ATTTAACCATATGCTCCCTC+TGG + chr5_3:12912477-12912496 None:intergenic 40.0%
! GGTTAAATTAGTTCGGTGGA+TGG - chr5_3:12912489-12912508 Msa0799640:CDS 40.0%
AGGAATGAGTGAGTGCTAAT+CGG + chr5_3:12912959-12912978 None:intergenic 40.0%
! ACTTTCTTTTTGCGCTGTTC+AGG - chr5_3:12913066-12913085 Msa0799640:CDS 40.0%
GTACGTATTCTTTGTGCAAG+GGG - chr5_3:12913142-12913161 Msa0799640:CDS 40.0%
!!! TCAATGGGTTTTTAGCTCGA+AGG + chr5_3:12913546-12913565 None:intergenic 40.0%
TTGTGGGAAGTTTGAACCAT+AGG + chr5_3:12913580-12913599 None:intergenic 40.0%
TTTGCTTGAGTGCAAGAGAT+GGG - chr5_3:12913720-12913739 Msa0799640:intron 40.0%
TTGTTTGGAAAAGCTCGTCT+TGG - chr5_3:12913907-12913926 Msa0799640:intron 40.0%
TGATGCTGTTGCAAATGGAA+AGG - chr5_3:12914017-12914036 Msa0799640:CDS 40.0%
! GTCTGACTGATGATAGTGAA+AGG - chr5_3:12914202-12914221 Msa0799640:intron 40.0%
TAGTGAAAGGATTCACGAGA+AGG - chr5_3:12914215-12914234 Msa0799640:intron 40.0%
!!! AGGTTGTTGGTTCTTTTGTG+CGG - chr5_3:12914235-12914254 Msa0799640:intron 40.0%
TAATTGTGCAGGTACAAGCA+AGG - chr5_3:12914399-12914418 Msa0799640:CDS 40.0%
GATAGACGAGATTTCGAATC+AGG - chr5_3:12914504-12914523 Msa0799640:intron 40.0%
TAATCATCTGCAAACTCCCA+TGG + chr5_3:12914606-12914625 None:intergenic 40.0%
GCTTTCAAAGAGATTGACTG+TGG - chr5_3:12914685-12914704 Msa0799640:CDS 40.0%
TTAAGCGTGCAATTTGGTCA+AGG + chr5_3:12915699-12915718 None:intergenic 40.0%
GCAGCTACTAAATTCTTCAG+AGG - chr5_3:12915737-12915756 Msa0799640:CDS 40.0%
TATGAGTCTGATGAAGATGC+TGG - chr5_3:12915822-12915841 Msa0799640:intron 40.0%
GAGTCAGATGGCAATAAACA+AGG - chr5_3:12915846-12915865 Msa0799640:intron 40.0%
CTTGAAAACAAACTCAGTGG+AGG + chr5_3:12915884-12915903 None:intergenic 40.0%
! ATTTGGGATGGTGTCTTCAA+TGG - chr5_3:12915992-12916011 Msa0799640:CDS 40.0%
ATGGTGTCTTCAATGGTGTT+GGG - chr5_3:12915999-12916018 Msa0799640:CDS 40.0%
TGTATTCTCAATTGGGTCAC+TGG + chr5_3:12916050-12916069 None:intergenic 40.0%
TCATCTCCACTTATCTCTAC+AGG - chr5_3:12916169-12916188 Msa0799640:intron 40.0%
CATCTCCACTTATCTCTACA+GGG - chr5_3:12916170-12916189 Msa0799640:intron 40.0%
CTATGTTGCAGCTGTATAAG+TGG - chr5_3:12916275-12916294 Msa0799640:intron 40.0%
CTGTATAAGTGGAATGCAAG+TGG - chr5_3:12916286-12916305 Msa0799640:intron 40.0%
!! TCCATACTTTGAGATCTGGA+GGG + chr5_3:12916318-12916337 None:intergenic 40.0%
!! ATCCTCCATACTTTGAGATC+TGG + chr5_3:12916322-12916341 None:intergenic 40.0%
AACAGCCTATTGCTCTCTTT+AGG - chr5_3:12916421-12916440 Msa0799640:intron 40.0%
TTTAGGAGCCAATGTTGCAT+TGG - chr5_3:12916438-12916457 Msa0799640:intron 40.0%
! TAGAAGTGTGTACATGTGAC+TGG + chr5_3:12916624-12916643 None:intergenic 40.0%
TCACACCAACAAATTAAGGG+AGG - chr5_3:12916681-12916700 Msa0799640:intron 40.0%
TCAGATAGTGAAGACAACTC+AGG - chr5_3:12916802-12916821 Msa0799640:intron 40.0%
CAGATAGTGAAGACAACTCA+GGG - chr5_3:12916803-12916822 Msa0799640:intron 40.0%
CAATTGCTTGGATACCACAT+CGG - chr5_3:12916873-12916892 Msa0799640:intron 40.0%
AAGAACATCACCACTTAAGC+TGG - chr5_3:12916912-12916931 Msa0799640:intron 40.0%
AGAACATCACCACTTAAGCT+GGG - chr5_3:12916913-12916932 Msa0799640:intron 40.0%
! TTCAGATCTTTTGGCAGAAG+TGG - chr5_3:12917029-12917048 Msa0799640:intron 40.0%
! CTTTTACCTGCATCAAGCAT+TGG + chr5_3:12917165-12917184 None:intergenic 40.0%
AACGAAATGCAAACACGAGT+TGG - chr5_3:12917481-12917500 Msa0799640:CDS 40.0%
ACGAAATGCAAACACGAGTT+GGG - chr5_3:12917482-12917501 Msa0799640:CDS 40.0%
TCTGTAGTAACTCCAAGCTT+TGG - chr5_3:12917555-12917574 Msa0799640:CDS 40.0%
CTGTAGTAACTCCAAGCTTT+GGG - chr5_3:12917556-12917575 Msa0799640:CDS 40.0%
TGTAGTAACTCCAAGCTTTG+GGG - chr5_3:12917557-12917576 Msa0799640:CDS 40.0%
GATCACTTCCGTATCTTGTT+TGG + chr5_3:12917587-12917606 None:intergenic 40.0%
! AAAGTGGGTACTGTAGGAAA+GGG - chr5_3:12917766-12917785 Msa0799640:five_prime_UTR 40.0%
GCTAATGGGATCCAAAATCA+TGG + chr5_3:12917813-12917832 None:intergenic 40.0%
! CACTCACGATTGGTTCAATG+TGG + chr5_3:12911126-12911145 None:intergenic 45.0%
GACTGGGTTCAGATGTAAGA+AGG + chr5_3:12911305-12911324 None:intergenic 45.0%
TCTCTCCGTCATGTTCACAT+CGG + chr5_3:12911606-12911625 None:intergenic 45.0%
GAGGTTATGAAGAAGAAGCG+CGG - chr5_3:12911683-12911702 Msa0799640:CDS 45.0%
! TAATGACCAGAGGGAGCATA+TGG - chr5_3:12912468-12912487 Msa0799640:CDS 45.0%
! TCTTTTTGCGCTGTTCAGGT+TGG - chr5_3:12913070-12913089 Msa0799640:CDS 45.0%
TGCCCAGGGAAATAAGGAAA+TGG - chr5_3:12913254-12913273 Msa0799640:intron 45.0%
TCATGTGTACCAAGACCGAA+GGG - chr5_3:12913353-12913372 Msa0799640:intron 45.0%
CTCAACATCAAGTTCCCCTT+CGG + chr5_3:12913371-12913390 None:intergenic 45.0%
!!! GCTACTTTTACAGTGTGACG+TGG - chr5_3:12913432-12913451 Msa0799640:intron 45.0%
ATTTCGATGACAAGAGCAGC+TGG - chr5_3:12913455-12913474 Msa0799640:intron 45.0%
TTTCGATGACAAGAGCAGCT+GGG - chr5_3:12913456-12913475 Msa0799640:intron 45.0%
!!! CAGCTGGGAGTATCTTTTCA+AGG - chr5_3:12913471-12913490 Msa0799640:intron 45.0%
CTTTGCTTGAGTGCAAGAGA+TGG - chr5_3:12913719-12913738 Msa0799640:intron 45.0%
TGATGTCCAGAATCTCTTGC+TGG - chr5_3:12913810-12913829 Msa0799640:intron 45.0%
CATACTCCAGCAAGAGATTC+TGG + chr5_3:12913819-12913838 None:intergenic 45.0%
TGCTGTTGCAAATGGAAAGG+AGG - chr5_3:12914020-12914039 Msa0799640:CDS 45.0%
AGGATTCACGAGAAGGTTGT+TGG - chr5_3:12914222-12914241 Msa0799640:intron 45.0%
GTGCGGATAAGAATCTCTAG+TGG - chr5_3:12914252-12914271 Msa0799640:intron 45.0%
CTATCGATATGACCTCCTTC+CGG + chr5_3:12914489-12914508 None:intergenic 45.0%
AGGAGTTCTCCGAGGTAAAT+AGG - chr5_3:12914524-12914543 Msa0799640:CDS 45.0%
AGGAGTCAAGTGTCTTCCAT+GGG - chr5_3:12914587-12914606 Msa0799640:intron 45.0%
CTTGCATTCATCCTGGACAT+AGG + chr5_3:12914639-12914658 None:intergenic 45.0%
ATAGTAACACCCACGCATCT+AGG + chr5_3:12915394-12915413 None:intergenic 45.0%
!! TGCGTGGGTGTTACTATCAT+AGG - chr5_3:12915397-12915416 Msa0799640:CDS 45.0%
GTGGGTATGTGCATGTTAGT+TGG - chr5_3:12915636-12915655 Msa0799640:CDS 45.0%
TTGCACGCTTAAAGAATGCG+TGG - chr5_3:12915707-12915726 Msa0799640:CDS 45.0%
TGTACACTCTGACCCCAATT+TGG - chr5_3:12915791-12915810 Msa0799640:intron 45.0%
! ACGGTGATATAAGCACTGTC+AGG + chr5_3:12915924-12915943 None:intergenic 45.0%
GAAGACACCATCCCAAATTC+TGG + chr5_3:12915990-12916009 None:intergenic 45.0%
GATGGTGTCTTCAATGGTGT+TGG - chr5_3:12915998-12916017 Msa0799640:CDS 45.0%
! TGGTGTCTTCAATGGTGTTG+GGG - chr5_3:12916000-12916019 Msa0799640:CDS 45.0%
!! AGAAGTGTCTAGTGTTGCAG+TGG - chr5_3:12916141-12916160 Msa0799640:intron 45.0%
GCAATCCCTGTAGAGATAAG+TGG + chr5_3:12916178-12916197 None:intergenic 45.0%
TGGCATTATCAGGATCCATC+TGG - chr5_3:12916232-12916251 Msa0799640:intron 45.0%
GGCATTATCAGGATCCATCT+GGG - chr5_3:12916233-12916252 Msa0799640:intron 45.0%
TTATCAGGATCCATCTGGGA+AGG - chr5_3:12916237-12916256 Msa0799640:intron 45.0%
TCCCTCCAGATCTCAAAGTA+TGG - chr5_3:12916314-12916333 Msa0799640:intron 45.0%
!! CTCCATACTTTGAGATCTGG+AGG + chr5_3:12916319-12916338 None:intergenic 45.0%
CTCCAGATCTCAAAGTATGG+AGG - chr5_3:12916317-12916336 Msa0799640:intron 45.0%
! GCTCCAAAAATGTGCCATTG+CGG - chr5_3:12916395-12916414 Msa0799640:intron 45.0%
! GTTCCGCAATGGCACATTTT+TGG + chr5_3:12916401-12916420 None:intergenic 45.0%
AATAGGCTGTTGTTCCGCAA+TGG + chr5_3:12916412-12916431 None:intergenic 45.0%
TGGCTCCTAAAGAGAGCAAT+AGG + chr5_3:12916429-12916448 None:intergenic 45.0%
GGATGACAAAGAAAGCAGTC+AGG - chr5_3:12916459-12916478 Msa0799640:intron 45.0%
GACAAAGAAAGCAGTCAGGA+TGG - chr5_3:12916463-12916482 Msa0799640:intron 45.0%
AAAGAAAGCAGTCAGGATGG+TGG - chr5_3:12916466-12916485 Msa0799640:intron 45.0%
AAGAAAGCAGTCAGGATGGT+GGG - chr5_3:12916467-12916486 Msa0799640:intron 45.0%
GATACTTCGACCCAGTCTAA+TGG - chr5_3:12916562-12916581 Msa0799640:intron 45.0%
GATGAATCCGTTAGGAGCAA+TGG - chr5_3:12916589-12916608 Msa0799640:intron 45.0%
AATCCGTTAGGAGCAATGGA+TGG - chr5_3:12916593-12916612 Msa0799640:intron 45.0%
ATGCCATCCATTGCTCCTAA+CGG + chr5_3:12916599-12916618 None:intergenic 45.0%
CATGACTCAAACAGGACTTC+TGG - chr5_3:12916742-12916761 Msa0799640:intron 45.0%
TCTGGTGGTCAGAGTAATAG+TGG - chr5_3:12916760-12916779 Msa0799640:intron 45.0%
AGACAACTCAGGGCAATCTT+CGG - chr5_3:12916813-12916832 Msa0799640:intron 45.0%
CGATGTGGTATCCAAGCAAT+TGG + chr5_3:12916875-12916894 None:intergenic 45.0%
TAGTTGCATTGCATGCTGGA+GGG + chr5_3:12916963-12916982 None:intergenic 45.0%
ACTACGTGGCAGGCTATTAT+AGG - chr5_3:12916979-12916998 Msa0799640:intron 45.0%
! AGATCTTTTGGCAGAAGTGG+AGG - chr5_3:12917032-12917051 Msa0799640:intron 45.0%
CGTAGTGAGGAATTGACTGA+TGG - chr5_3:12917102-12917121 Msa0799640:intron 45.0%
CTTAGTCCAATGCTTGATGC+AGG - chr5_3:12917156-12917175 Msa0799640:CDS 45.0%
ATCTCAATCTACAGCAGCAG+AGG - chr5_3:12917221-12917240 Msa0799640:intron 45.0%
! TTTTCCAGCCACTGCAACAT+TGG - chr5_3:12917389-12917408 Msa0799640:intron 45.0%
TTTCCAGCCACTGCAACATT+GGG - chr5_3:12917390-12917409 Msa0799640:intron 45.0%
TTCCAATCCAAGTCTCCAAG+TGG + chr5_3:12917430-12917449 None:intergenic 45.0%
! TGGATTGGAAAGTACACACC+TGG - chr5_3:12917440-12917459 Msa0799640:CDS 45.0%
! TGGAAAGTACACACCTGGAA+TGG - chr5_3:12917445-12917464 Msa0799640:CDS 45.0%
! GGAAAGTACACACCTGGAAT+GGG - chr5_3:12917446-12917465 Msa0799640:CDS 45.0%
! GAAAGTACACACCTGGAATG+GGG - chr5_3:12917447-12917466 Msa0799640:CDS 45.0%
CGAAATGCAAACACGAGTTG+GGG - chr5_3:12917483-12917502 Msa0799640:CDS 45.0%
GGGGATAGCCAAACAAGATA+CGG - chr5_3:12917576-12917595 Msa0799640:CDS 45.0%
! GATTTTCTGTGCCCAGAGAT+CGG - chr5_3:12917607-12917626 Msa0799640:CDS 45.0%
! ATTTTCTGTGCCCAGAGATC+GGG - chr5_3:12917608-12917627 Msa0799640:CDS 45.0%
AGGGAACCAGGTTTAGTTAG+AGG - chr5_3:12917648-12917667 Msa0799640:CDS 45.0%
CCATTACCAACACCAAATGG+CGG + chr5_3:12917696-12917715 None:intergenic 45.0%
CCTCCATTACCAACACCAAA+TGG + chr5_3:12917699-12917718 None:intergenic 45.0%
!! CCATTTGGTGTTGGTAATGG+AGG - chr5_3:12917696-12917715 Msa0799640:CDS 45.0%
TTACAAACTCGCTGCCCTTT+GGG + chr5_3:12917738-12917757 None:intergenic 45.0%
TTTACAAACTCGCTGCCCTT+TGG + chr5_3:12917739-12917758 None:intergenic 45.0%
! GAAAGTGGGTACTGTAGGAA+AGG - chr5_3:12917765-12917784 Msa0799640:five_prime_UTR 45.0%
! AAGTGGGTACTGTAGGAAAG+GGG - chr5_3:12917767-12917786 Msa0799640:five_prime_UTR 45.0%
!! TCATGGGTGGAAGTATTCAC+AGG + chr5_3:12917796-12917815 None:intergenic 45.0%
ATGGGATCCAAAATCATGGG+TGG + chr5_3:12917809-12917828 None:intergenic 45.0%
CAAATGCGGCCAATGCTAAT+GGG + chr5_3:12917827-12917846 None:intergenic 45.0%
TCAAATGCGGCCAATGCTAA+TGG + chr5_3:12917828-12917847 None:intergenic 45.0%
!!! TTAAAATTTAAAACAAATAT+AGG + chr5_3:12913001-12913020 None:intergenic 5.0%
!!! TAAATTTTAATAGTTTATTT+TGG - chr5_3:12913011-12913030 Msa0799640:CDS 5.0%
! GTTGCAGTTGCCGGTGTTTT+CGG + chr5_3:12911497-12911516 None:intergenic 50.0%
GAAAACACCGGCAACTGCAA+CGG - chr5_3:12911496-12911515 Msa0799640:CDS 50.0%
AACTGCAACGGAGACAGTTC+CGG - chr5_3:12911508-12911527 Msa0799640:CDS 50.0%
! GCAAGTTGAAGTTCCGACGA+AGG - chr5_3:12911574-12911593 Msa0799640:CDS 50.0%
ACATCGGAAACAGCCTTCGT+CGG + chr5_3:12911590-12911609 None:intergenic 50.0%
! GTGAACATGACGGAGAGAGA+CGG - chr5_3:12911608-12911627 Msa0799640:CDS 50.0%
ACTTTCGGAGTTCCTTTCGC+CGG + chr5_3:12911713-12911732 None:intergenic 50.0%
TCCTTCTTGATCTGCTTCGG+CGG + chr5_3:12911743-12911762 None:intergenic 50.0%
TGCTTCATTTGCTTCGACGG+TGG - chr5_3:12911776-12911795 Msa0799640:CDS 50.0%
ATCGCTAAACCCTCACTCAC+CGG + chr5_3:12911823-12911842 None:intergenic 50.0%
CTGATTGAGAACAGTGCCCA+GGG - chr5_3:12913240-12913259 Msa0799640:intron 50.0%
GAACAGTGCCCAGGGAAATA+AGG - chr5_3:12913248-12913267 Msa0799640:intron 50.0%
CTCATGTGTACCAAGACCGA+AGG - chr5_3:12913352-12913371 Msa0799640:intron 50.0%
CATGTGTACCAAGACCGAAG+GGG - chr5_3:12913354-12913373 Msa0799640:CDS 50.0%
ATCAAGTTCCCCTTCGGTCT+TGG + chr5_3:12913365-12913384 None:intergenic 50.0%
AAGAAGCCTAAGGGACCTTC+AGG - chr5_3:12913679-12913698 Msa0799640:intron 50.0%
GTGCAAGAGATGGGCATCAA+AGG - chr5_3:12913729-12913748 Msa0799640:intron 50.0%
TTCGAATCAGGAGTTCTCCG+AGG - chr5_3:12914516-12914535 Msa0799640:CDS 50.0%
GAGGAGTCAAGTGTCTTCCA+TGG - chr5_3:12914586-12914605 Msa0799640:intron 50.0%
GCAATCGCTTGCATTCATCC+TGG + chr5_3:12914646-12914665 None:intergenic 50.0%
TCGGGATAGAGCAAGTGAGA+AGG - chr5_3:12915196-12915215 Msa0799640:CDS 50.0%
CGGGATAGAGCAAGTGAGAA+GGG - chr5_3:12915197-12915216 Msa0799640:CDS 50.0%
! ACGCATCTAGGCACTGCTAA+TGG + chr5_3:12915382-12915401 None:intergenic 50.0%
ATTAGCAGTGCCTAGATGCG+TGG - chr5_3:12915381-12915400 Msa0799640:CDS 50.0%
TTAGCAGTGCCTAGATGCGT+GGG - chr5_3:12915382-12915401 Msa0799640:CDS 50.0%
TTGGGGTCAGAGTGTACATC+TGG + chr5_3:12915789-12915808 None:intergenic 50.0%
GAAGATGCTGGAGAGTCAGA+TGG - chr5_3:12915834-12915853 Msa0799640:intron 50.0%
! GGTGTCTTCAATGGTGTTGG+GGG - chr5_3:12916001-12916020 Msa0799640:CDS 50.0%
! ATGGTGTTGGGGGAAGAACA+CGG - chr5_3:12916011-12916030 Msa0799640:CDS 50.0%
GATCCATCTGGGAAGGTTCA+AGG - chr5_3:12916244-12916263 Msa0799640:intron 50.0%
GACTCAAACAGGACTTCTGG+TGG - chr5_3:12916745-12916764 Msa0799640:intron 50.0%
CTCAGAAACATGAGCCGATG+TGG + chr5_3:12916890-12916909 None:intergenic 50.0%
AGTTGCATTGCATGCTGGAG+GGG + chr5_3:12916962-12916981 None:intergenic 50.0%
GTAGTTGCATTGCATGCTGG+AGG + chr5_3:12916964-12916983 None:intergenic 50.0%
CACGTAGTTGCATTGCATGC+TGG + chr5_3:12916967-12916986 None:intergenic 50.0%
CAGCATGCAATGCAACTACG+TGG - chr5_3:12916965-12916984 Msa0799640:intron 50.0%
ATGCAATGCAACTACGTGGC+AGG - chr5_3:12916969-12916988 Msa0799640:intron 50.0%
TTTGGCAGAAGTGGAGGCAA+TGG - chr5_3:12917038-12917057 Msa0799640:intron 50.0%
! AATGGAATCGCTTGGTGGCT+TGG - chr5_3:12917056-12917075 Msa0799640:intron 50.0%
TCAAGTAACCAGTGGGAGTC+AGG - chr5_3:12917348-12917367 Msa0799640:intron 50.0%
AGTCATGCCCAATGTTGCAG+TGG + chr5_3:12917400-12917419 None:intergenic 50.0%
GCATGACTGTAGACACCACT+TGG - chr5_3:12917412-12917431 Msa0799640:CDS 50.0%
GTAGACACCACTTGGAGACT+TGG - chr5_3:12917420-12917439 Msa0799640:CDS 50.0%
CACCACTTGGAGACTTGGAT+TGG - chr5_3:12917425-12917444 Msa0799640:CDS 50.0%
GAGTTGGGGAGTAGGACATA+CGG - chr5_3:12917497-12917516 Msa0799640:CDS 50.0%
GTTTGGCTATCCCCAAAGCT+TGG + chr5_3:12917570-12917589 None:intergenic 50.0%
! TTTTCTGTGCCCAGAGATCG+GGG - chr5_3:12917609-12917628 Msa0799640:CDS 50.0%
! GGGTTTTCCTGGTCATGGTA+GGG - chr5_3:12917629-12917648 Msa0799640:CDS 50.0%
GCTCTGCCTCTAACTAAACC+TGG + chr5_3:12917657-12917676 None:intergenic 50.0%
!! CCGCCATTTGGTGTTGGTAA+TGG - chr5_3:12917693-12917712 Msa0799640:CDS 50.0%
TCGTATAGACCTCTGCCCAA+AGG - chr5_3:12917720-12917739 Msa0799640:CDS 50.0%
CGTATAGACCTCTGCCCAAA+GGG - chr5_3:12917721-12917740 Msa0799640:CDS 50.0%
GACACTTGACTAGTACTGCC+AGG + chr5_3:12917906-12917925 None:intergenic 50.0%
ACTGTCTCCGTTGCAGTTGC+CGG + chr5_3:12911506-12911525 None:intergenic 55.0%
! AACATGACGGAGAGAGACGG+CGG - chr5_3:12911611-12911630 Msa0799640:CDS 55.0%
GAGAGACGGCGGTTGTTGTA+CGG - chr5_3:12911622-12911641 Msa0799640:CDS 55.0%
TGTCATCGCCGAGAACAGTG+AGG - chr5_3:12911664-12911683 Msa0799640:CDS 55.0%
! TTCGGCGGAGGAGCTACTTT+CGG + chr5_3:12911728-12911747 None:intergenic 55.0%
TTCTTGATCTGCTTCGGCGG+AGG + chr5_3:12911740-12911759 None:intergenic 55.0%
TCCGCCGAAGCAGATCAAGA+AGG - chr5_3:12911739-12911758 Msa0799640:CDS 55.0%
CACGCCGGATGATACGCTTT+AGG + chr5_3:12912042-12912061 None:intergenic 55.0%
TCATCTCGCTTGACACACGC+CGG + chr5_3:12912057-12912076 None:intergenic 55.0%
GCTGATTGAGAACAGTGCCC+AGG - chr5_3:12913239-12913258 Msa0799640:intron 55.0%
TAGGAGCAGCAGCGCTCAAT+GGG + chr5_3:12913561-12913580 None:intergenic 55.0%
ATAGGAGCAGCAGCGCTCAA+TGG + chr5_3:12913562-12913581 None:intergenic 55.0%
! ATTGAGCGCTGCTGCTCCTA+TGG - chr5_3:12913561-12913580 Msa0799640:intron 55.0%
AAGCCTAAGGGACCTTCAGG+CGG - chr5_3:12913682-12913701 Msa0799640:intron 55.0%
CTACTTGCGGCGAAGTCTGA+TGG - chr5_3:12914176-12914195 Msa0799640:intron 55.0%
! TGGTGTTGGGGGAAGAACAC+GGG - chr5_3:12916012-12916031 Msa0799640:CDS 55.0%
CTCAATTGGGTCACTGGCAG+TGG + chr5_3:12916044-12916063 None:intergenic 55.0%
GGTCCTTGAACCTTCCCAGA+TGG + chr5_3:12916250-12916269 None:intergenic 55.0%
!! AAAGCAGTCAGGATGGTGGG+AGG - chr5_3:12916470-12916489 Msa0799640:intron 55.0%
GGCAATCTTCGGCACAAAGC+TGG - chr5_3:12916824-12916843 Msa0799640:intron 55.0%
ATTGCATGCTGGAGGGGAAG+GGG + chr5_3:12916956-12916975 None:intergenic 55.0%
CATTGCATGCTGGAGGGGAA+GGG + chr5_3:12916957-12916976 None:intergenic 55.0%
GTGGAGGCAATGGAATCGCT+TGG - chr5_3:12917048-12917067 Msa0799640:intron 55.0%
GAGGCAATGGAATCGCTTGG+TGG - chr5_3:12917051-12917070 Msa0799640:intron 55.0%
TAACCAGTGGGAGTCAGGCT+CGG - chr5_3:12917353-12917372 Msa0799640:intron 55.0%
ATGCCCAATGTTGCAGTGGC+TGG + chr5_3:12917396-12917415 None:intergenic 55.0%
AGTACACACCTGGAATGGGG+AGG - chr5_3:12917450-12917469 Msa0799640:CDS 55.0%
ACACCTGGAATGGGGAGGAA+TGG - chr5_3:12917455-12917474 Msa0799640:CDS 55.0%
GATCCATTCCTCCCCATTCC+AGG + chr5_3:12917461-12917480 None:intergenic 55.0%
! GCAAACACGAGTTGGGGAGT+AGG - chr5_3:12917489-12917508 Msa0799640:CDS 55.0%
CCAGGAAAACCCCGATCTCT+GGG + chr5_3:12917621-12917640 None:intergenic 55.0%
ACCAGGAAAACCCCGATCTC+TGG + chr5_3:12917622-12917641 None:intergenic 55.0%
! GATCGGGGTTTTCCTGGTCA+TGG - chr5_3:12917624-12917643 Msa0799640:CDS 55.0%
! GGGGTTTTCCTGGTCATGGT+AGG - chr5_3:12917628-12917647 Msa0799640:CDS 55.0%
TAGTTAGAGGCAGAGCTGCG+TGG - chr5_3:12917661-12917680 Msa0799640:CDS 55.0%
TGGAACAGGCAACCGCCATT+TGG - chr5_3:12917681-12917700 Msa0799640:CDS 55.0%
!! AGGCAACCGCCATTTGGTGT+TGG - chr5_3:12917687-12917706 Msa0799640:CDS 55.0%
GACAGTTCCGGCGACAGTTC+CGG - chr5_3:12911520-12911539 Msa0799640:CDS 60.0%
GACAGTTCCGGTGGCCGTTA+CGG - chr5_3:12911532-12911551 Msa0799640:CDS 60.0%
! AACTTGCTTCGTCTCCGCCG+CGG + chr5_3:12911561-12911580 None:intergenic 60.0%
! GAAGAAGAAGCGCGGTCGTC+CGG - chr5_3:12911691-12911710 Msa0799640:CDS 60.0%
GTCTCGTTCTCTGCGATCGC+CGG - chr5_3:12911801-12911820 Msa0799640:CDS 60.0%
TCACCGCCTGAAGGTCCCTT+AGG + chr5_3:12913688-12913707 None:intergenic 60.0%
TTGCATGCTGGAGGGGAAGG+GGG + chr5_3:12916955-12916974 None:intergenic 60.0%
GCATTGCATGCTGGAGGGGA+AGG + chr5_3:12916958-12916977 None:intergenic 60.0%
TTTCCGAGCCTGACTCCCAC+TGG + chr5_3:12917359-12917378 None:intergenic 60.0%
! CCCAGAGATCGGGGTTTTCC+TGG - chr5_3:12917618-12917637 Msa0799640:CDS 60.0%
CCTGGTTCCCTACCATGACC+AGG + chr5_3:12917639-12917658 None:intergenic 60.0%
CCTGGTCATGGTAGGGAACC+AGG - chr5_3:12917636-12917655 Msa0799640:CDS 60.0%
AGTTCCGGCGACAGTTCCGG+TGG - chr5_3:12911523-12911542 Msa0799640:CDS 65.0%
TCTGCGATCGCCGGTGAGTG+AGG - chr5_3:12911810-12911829 Msa0799640:CDS 65.0%
CTGCGATCGCCGGTGAGTGA+GGG - chr5_3:12911811-12911830 Msa0799640:CDS 65.0%
GGGACCTTCAGGCGGTGACA+CGG - chr5_3:12913690-12913709 Msa0799640:intron 65.0%
GGACCTTCAGGCGGTGACAC+GGG - chr5_3:12913691-12913710 Msa0799640:intron 65.0%
ACACCCGTGTCACCGCCTGA+AGG + chr5_3:12913697-12913716 None:intergenic 65.0%
ATGCTGGAGGGGAAGGGGGT+TGG + chr5_3:12916951-12916970 None:intergenic 65.0%
GAGGCAGAGCTGCGTGGAAC+AGG - chr5_3:12917667-12917686 Msa0799640:CDS 65.0%
ACTCGCTGCCCTTTGGGCAG+AGG + chr5_3:12917732-12917751 None:intergenic 65.0%
ACGGCCACCGGAACTGTCGC+CGG + chr5_3:12911530-12911549 None:intergenic 70.0%
GCGGTCTCCGTAACGGCCAC+CGG + chr5_3:12911542-12911561 None:intergenic 70.0%
GGTGGCCGTTACGGAGACCG+CGG - chr5_3:12911541-12911560 Msa0799640:CDS 70.0%
CTCCGCCGCGGTCTCCGTAA+CGG + chr5_3:12911549-12911568 None:intergenic 70.0%
AAGCGCGGTCGTCCGGCGAA+AGG - chr5_3:12911698-12911717 Msa0799640:CDS 70.0%
GGCCGTTACGGAGACCGCGG+CGG - chr5_3:12911544-12911563 Msa0799640:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 12911096 12918125 12911096 ID=Msa0799640;Name=Msa0799640
chr5_3 mRNA 12911096 12918125 12911096 ID=Msa0799640-mRNA-1;Parent=Msa0799640;Name=Msa0799640-mRNA-1;_AED=0.08;_eAED=0.08;_QI=383|0.88|0.8|1|0.88|0.8|10|310|1260
chr5_3 exon 12911096 12913255 12911096 ID=Msa0799640-mRNA-1:exon:5353;Parent=Msa0799640-mRNA-1
chr5_3 exon 12913354 12913448 12913354 ID=Msa0799640-mRNA-1:exon:5352;Parent=Msa0799640-mRNA-1
chr5_3 exon 12913945 12914060 12913945 ID=Msa0799640-mRNA-1:exon:5351;Parent=Msa0799640-mRNA-1
chr5_3 exon 12914384 12914434 12914384 ID=Msa0799640-mRNA-1:exon:5350;Parent=Msa0799640-mRNA-1
chr5_3 exon 12914515 12914574 12914515 ID=Msa0799640-mRNA-1:exon:5349;Parent=Msa0799640-mRNA-1
chr5_3 exon 12914684 12914811 12914684 ID=Msa0799640-mRNA-1:exon:5348;Parent=Msa0799640-mRNA-1
chr5_3 exon 12914906 12915776 12914906 ID=Msa0799640-mRNA-1:exon:5347;Parent=Msa0799640-mRNA-1
chr5_3 exon 12915946 12916133 12915946 ID=Msa0799640-mRNA-1:exon:5346;Parent=Msa0799640-mRNA-1
chr5_3 exon 12917110 12917189 12917110 ID=Msa0799640-mRNA-1:exon:5345;Parent=Msa0799640-mRNA-1
chr5_3 exon 12917399 12918125 12917399 ID=Msa0799640-mRNA-1:exon:5344;Parent=Msa0799640-mRNA-1
chr5_3 five_prime_UTR 12917743 12918125 12917743 ID=Msa0799640-mRNA-1:five_prime_utr;Parent=Msa0799640-mRNA-1
chr5_3 CDS 12917399 12917742 12917399 ID=Msa0799640-mRNA-1:cds;Parent=Msa0799640-mRNA-1
chr5_3 CDS 12917110 12917189 12917110 ID=Msa0799640-mRNA-1:cds;Parent=Msa0799640-mRNA-1
chr5_3 CDS 12915946 12916133 12915946 ID=Msa0799640-mRNA-1:cds;Parent=Msa0799640-mRNA-1
chr5_3 CDS 12914906 12915776 12914906 ID=Msa0799640-mRNA-1:cds;Parent=Msa0799640-mRNA-1
chr5_3 CDS 12914684 12914811 12914684 ID=Msa0799640-mRNA-1:cds;Parent=Msa0799640-mRNA-1
chr5_3 CDS 12914515 12914574 12914515 ID=Msa0799640-mRNA-1:cds;Parent=Msa0799640-mRNA-1
chr5_3 CDS 12914384 12914434 12914384 ID=Msa0799640-mRNA-1:cds;Parent=Msa0799640-mRNA-1
chr5_3 CDS 12913945 12914060 12913945 ID=Msa0799640-mRNA-1:cds;Parent=Msa0799640-mRNA-1
chr5_3 CDS 12913354 12913448 12913354 ID=Msa0799640-mRNA-1:cds;Parent=Msa0799640-mRNA-1
chr5_3 CDS 12911406 12913255 12911406 ID=Msa0799640-mRNA-1:cds;Parent=Msa0799640-mRNA-1
chr5_3 three_prime_UTR 12911096 12911405 12911096 ID=Msa0799640-mRNA-1:three_prime_utr;Parent=Msa0799640-mRNA-1
Gene Sequence

>Msa0799640

ATGGAACAATCAAAGCCGAAAACACCGGCAACTGCAACGGAGACAGTTCCGGCGACAGTTCCGGTGGCCGTTACGGAGACCGCGGCGGAGACGAAGCAAGTTGAAGTTCCGACGAAGGCTGTTTCCGATGTGAACATGACGGAGAGAGACGGCGGTTGTTGTACGGCGCCGAAAGTAGTTCTCGCTGTCATCGCCGAGAACAGTGAGGTTATGAAGAAGAAGCGCGGTCGTCCGGCGAAAGGAACTCCGAAAGTAGCTCCTCCGCCGAAGCAGATCAAGAAGGAAGATGAAGATGTTTGCTTCATTTGCTTCGACGGTGGAAGTCTCGTTCTCTGCGATCGCCGGGGTTGTCCTAAAGCGTATCATCCGGCGTGTGTCAAGCGAGATGAAGCGTTCTTCCGTTCAAAAGCCAAATGGAATTGCGGTTGGCATATATGTAGCTCTTGTCAGAAAACATCCCATTATATGTGCTATACATGTACGTATTCTTTGTGCAAGGGGTGTATAAAAAATGCGGATTTTGTTTCTGTTAGAGAAAATAAAGGTTTGTGTGGAATTTGCAAGAAAACTATAATGCTGATTGAGAACAGTGCCCAGGGAAATAAGGAAATGTGTGACGTGGATTTCGATGACAAGAGCAGCTGGGAGTATCTTTTCAAGGTGTATTGGACATTATTGAAAGAGAATCTATCTTTAACGTTTGATGAGCTCCTTCGAGCTAAAAACCCATTGAGCGCTGCTGCTCCTATGGTTCAAACTTCCCACAAACTTTACCATCTTAAAGATGAAAAAGGTTCTGGTTTTGAGAACTCCTGTGTAGATATAGAATCAAATAATTTGAAAAACAAGAAGCCTAAGGGACCTTCAGGCGGTGACACGGGTGTGTCTTTGCTTGAGTGCAAGAGATGGGCATCAAAGGAGCTTCTAGAGTTTGTCTCACATATGAAAAATGGTGATACGTCTATACTTTCTCAATTTGATGTCCAGAATCTCTTGCTGGAGTATGTAAAGAAAAACAATCTGCGTGACCCTCAACAGAAATCTCTAATTGTTTGCGACTCTAGACTAGTAAATTTGTTTGGAAAAGCTCGTCTTGGATACATTGAAATGCTAATGCTCCTTGAACCCCACTTTCTTATAAAAGAAAATACCCCTGCAGAAAATAATTTTGGAGCAGGAATTAGTGATGCTGTTGCAAATGGAAAGGAGGCTATTGACAGTAACAATAAACAGTCAGTATTAGTCAATGATAAGAGATGCACAAGTAAAAAGGCTGACATGCCTGTGCCACAAAATAATCAAGATGCATACGCGTCAATAAATGCTCACAACATTAACTTGATCTACTTGCGGCGAAGTCTGATGGAGAGTCTGACTGATGATAGTGAAAGGATTCACGAGAAGGTTGTTGGTTCTTTTGTGCGGATAAGAATCTCTAGTGGTGATCAGAAACAAGATATGTATAGACTTGTCCAAGTTGTAGGTACAAGCAAGGTTGCTGAACCTTACAAAATTGGCACAAGAACGACTGACATTAAGCTTGAAATTTTAAATTTAAACCGGAAGGAGGTCATATCGATAGACGAGATTTCGAATCAGGAGTTCTCCGAGGATGAATGCAAGCGATTGCGTCAAAGTATAAAGTATGGGCTTTCAAAGAGATTGACTGTGGGAGAGATTCTGAACAAAGCGCTCACATTTCAAGAAATTAGAGTCAATGATTTATTGGAAGCTGAGAAATTGCGGCTTAATAATCTTCGGGATAGAGCAAGTGAGAAGGGACACAGAAAAGAATATCCTTTACCATTTACTTCTTTCCTAAATATGCTAAACTGTGGACTGCATGAAGTTCCAGATGTACACTCTGACCCCAATTTGGATTCATTGTATGAGTCTGATGAAGATGCTGGAGAGTCAGATGGCAATAAACAAGATGGCAATATACCTATTTTCTCCAGAATTTGGGATGGTGTCTTCAATGGTGTTGGGGGAAGAACACGGGACTTGACCACTGCCAGTGACCCAATTGAGAATACATGCTTACTAAAGAAGCATATCAACCCAAACGAAACTCCTATTGATGATAGTGCTGATGTTGTTACGAAATCAGAAGTGTCTAGTGTTGCAGTGGACATTTCATCTCCACTTATCTCTACAGGGATTGCGCAGCCATTTGATGATTTTATGAATGATAGATCATGGCATTATCAGGATCCATCTGGGAAGGTTCAAGGACCTTTTTCTATGTTGCAGCTGTATAAGTGGAATGCAAGTGGACATTTCCCTCCAGATCTCAAAGTATGGAGGATAGATGAGAAACAAGTAAACTCTATATTGTTAACTGATGCACTTAATGGGAAGTGCTCCAAAAATGTGCCATTGCGGAACAACAGCCTATTGCTCTCTTTAGGAGCCAATGTTGCATTGGATGACAAAGAAAGCAGTCAGGATGGTGGGAGGAATTCAACAACGAATGAAATTTCTGCAGATAGCCGAATCATAGAACAGATCAGAGAACAAAAAGTGGATGATACTTCGACCCAGTCTAATGGTAAAGATGAATCCGTTAGGAGCAATGGATGGCATGACCAGTCACATGTACACACTTCTATACAACCAACTGCCTTTTCTGAGAATTTGAATGAGAATCACACCAACAAATTAAGGGAGGATCATGGGATTGAAAAAAACTCTGAAGATAATGGAAATCATGACTCAAACAGGACTTCTGGTGGTCAGAGTAATAGTGGTCAGAATCATCAGAAGCAATCAGATAGTGAAGACAACTCAGGGCAATCTTCGGCACAAAGCTGGAGAAACCATAATGTAAATACTTCTTCCAATTGCTTGGATACCACATCGGCTCATGTTTCTGAGACAAGAACATCACCACTTAAGCTGGGATTTGATTTGCACCAACCCCCTTCCCCTCCAGCATGCAATGCAACTACGTGGCAGGCTATTATAGGTGAACCAGATGATTTTGATGAATCAGTTTCAGATCTTTTGGCAGAAGTGGAGGCAATGGAATCGCTTGGTGGCTTGGAATCTCCCACTTCAATCATGAAACGTAGTGAGGAATTGACTGATGGTTCTAAAAATCTTTGTCTCAGTTTTGCAGAGCTTAGTCCAATGCTTGATGCAGGTAAAAGCGATGCATTGAGCTCCACATGTGATTTACAGTTACTATCTCAATCTACAGCAGCAGAGGAACCGTTACAACAAGCAGATGTCAATCATCATCATCAAAGAATATCAGAGGAGCTTTCCTCGAGAAATTCTAAAGTTGATGTGGGTTCAAAGAACATATGTGTTTCAAGTAACCAGTGGGAGTCAGGCTCGGAAAATTCTTCTATTTTTCCAGCCACTGCAACATTGGGCATGACTGTAGACACCACTTGGAGACTTGGATTGGAAAGTACACACCTGGAATGGGGAGGAATGGATCAACGAAATGCAAACACGAGTTGGGGAGTAGGACATACGGCAGTGAATGAGAACAGAAGCTCAAATTCATGCACTTCTGTAGTAACTCCAAGCTTTGGGGATAGCCAAACAAGATACGGAAGTGATCGATTTTCTGTGCCCAGAGATCGGGGTTTTCCTGGTCATGGTAGGGAACCAGGTTTAGTTAGAGGCAGAGCTGCGTGGAACAGGCAACCGCCATTTGGTGTTGGTAATGGAGGCTCGTATAGACCTCTGCCCAAAGGGCAGCGAGTTTGTAAATTTTATGAAAGTGGGTACTGTAGGAAAGGGGCATCCTGTGAATACTTCCACCCATGA
Protein sequence

>Msa0799640

MEQSKPKTPATATETVPATVPVAVTETAAETKQVEVPTKAVSDVNMTERDGGCCTAPKVVLAVIAENSEVMKKKRGRPAKGTPKVAPPPKQIKKEDEDVCFICFDGGSLVLCDRRGCPKAYHPACVKRDEAFFRSKAKWNCGWHICSSCQKTSHYMCYTCTYSLCKGCIKNADFVSVRENKGLCGICKKTIMLIENSAQGNKEMCDVDFDDKSSWEYLFKVYWTLLKENLSLTFDELLRAKNPLSAAAPMVQTSHKLYHLKDEKGSGFENSCVDIESNNLKNKKPKGPSGGDTGVSLLECKRWASKELLEFVSHMKNGDTSILSQFDVQNLLLEYVKKNNLRDPQQKSLIVCDSRLVNLFGKARLGYIEMLMLLEPHFLIKENTPAENNFGAGISDAVANGKEAIDSNNKQSVLVNDKRCTSKKADMPVPQNNQDAYASINAHNINLIYLRRSLMESLTDDSERIHEKVVGSFVRIRISSGDQKQDMYRLVQVVGTSKVAEPYKIGTRTTDIKLEILNLNRKEVISIDEISNQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALTFQEIRVNDLLEAEKLRLNNLRDRASEKGHRKEYPLPFTSFLNMLNCGLHEVPDVHSDPNLDSLYESDEDAGESDGNKQDGNIPIFSRIWDGVFNGVGGRTRDLTTASDPIENTCLLKKHINPNETPIDDSADVVTKSEVSSVAVDISSPLISTGIAQPFDDFMNDRSWHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLKVWRIDEKQVNSILLTDALNGKCSKNVPLRNNSLLLSLGANVALDDKESSQDGGRNSTTNEISADSRIIEQIREQKVDDTSTQSNGKDESVRSNGWHDQSHVHTSIQPTAFSENLNENHTNKLREDHGIEKNSEDNGNHDSNRTSGGQSNSGQNHQKQSDSEDNSGQSSAQSWRNHNVNTSSNCLDTTSAHVSETRTSPLKLGFDLHQPPSPPACNATTWQAIIGEPDDFDESVSDLLAEVEAMESLGGLESPTSIMKRSEELTDGSKNLCLSFAELSPMLDAGKSDALSSTCDLQLLSQSTAAEEPLQQADVNHHHQRISEELSSRNSKVDVGSKNICVSSNQWESGSENSSIFPATATLGMTVDTTWRLGLESTHLEWGGMDQRNANTSWGVGHTAVNENRSSNSCTSVVTPSFGDSQTRYGSDRFSVPRDRGFPGHGREPGLVRGRAAWNRQPPFGVGNGGSYRPLPKGQRVCKFYESGYCRKGASCEYFHP*