AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0718150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0718150 MtrunA17_Chr5g0407261 97.788 904 20 0 30 933 1 904 0.0 1830
Msa0718150 MtrunA17_Chr8g0370241 57.603 901 276 18 59 929 20 844 0.0 954
Msa0718150 MtrunA17_Chr8g0369971 40.443 722 286 24 77 785 25 615 3.04e-142 437
Msa0718150 MtrunA17_Chr6g0477411 85.714 56 2 1 440 495 1 50 1.02e-21 90.9
Msa0718150 MtrunA17_Chr6g0477411 72.917 48 9 1 660 703 42 89 3.15e-13 66.6
Msa0718150 MtrunA17_Chr7g0272841 27.715 267 148 8 535 796 104 330 2.75e-18 90.1
Msa0718150 MtrunA17_Chr1g0205931 26.316 266 151 8 536 796 92 317 1.37e-17 87.8
Msa0718150 MtrunA17_Chr4g0074811 28.889 315 154 15 507 801 87 351 1.50e-17 87.0
Msa0718150 MtrunA17_Chr4g0033521 26.934 349 215 17 515 832 426 765 5.85e-17 86.3
Msa0718150 MtrunA17_Chr8g0384301 29.213 267 140 11 550 811 347 569 1.45e-16 84.7
Msa0718150 MtrunA17_Chr0c02g0489761 28.155 309 152 13 513 801 80 338 2.08e-16 83.6
Msa0718150 MtrunA17_Chr8g0346071 27.961 304 161 13 506 797 13 270 2.14e-16 82.8
Msa0718150 MtrunA17_Chr3g0117731 26.056 284 174 11 512 792 58 308 6.18e-16 80.5
Msa0718150 MtrunA17_Chr8g0374701 25.895 363 203 11 464 802 75 395 7.33e-16 82.0
Msa0718150 MtrunA17_Chr4g0001331 33.333 177 97 7 642 811 121 283 7.88e-16 81.3
Msa0718150 MtrunA17_Chr6g0474831 27.826 230 139 9 517 733 34 249 8.95e-16 79.3
Msa0718150 MtrunA17_Chr5g0419441 25.817 306 160 12 509 797 238 493 1.10e-15 82.0
Msa0718150 MtrunA17_Chr4g0045261 28.477 302 154 12 513 795 139 397 1.49e-15 81.3
Msa0718150 MtrunA17_Chr4g0059121 35.000 160 94 6 636 792 157 309 2.87e-15 78.6
Msa0718150 MtrunA17_Chr3g0130151 26.452 310 162 11 515 811 248 504 2.98e-15 80.1
Msa0718150 MtrunA17_Chr4g0042731 28.621 290 153 11 517 792 149 398 5.57e-15 78.2
Msa0718150 MtrunA17_Chr4g0063881 29.703 303 159 14 505 797 6 264 5.90e-15 78.6
Msa0718150 MtrunA17_Chr4g0041201 25.641 273 156 9 526 792 561 792 6.61e-15 79.3
Msa0718150 MtrunA17_Chr8g0355131 27.327 333 180 12 471 795 26 304 1.80e-14 77.4
Msa0718150 MtrunA17_Chr4g0059751 34.932 146 77 6 646 785 202 335 2.09e-14 76.6
Msa0718150 MtrunA17_Chr3g0090261 24.055 291 169 11 513 792 84 333 2.17e-14 75.9
Msa0718150 MtrunA17_Chr3g0127571 27.476 313 161 14 504 795 131 398 3.52e-14 76.6
Msa0718150 MtrunA17_Chr1g0197721 26.201 229 123 7 529 749 74 264 7.12e-14 75.5
Msa0718150 MtrunA17_Chr1g0206551 27.778 234 129 8 514 742 39 237 9.84e-14 73.9
Msa0718150 MtrunA17_Chr8g0359691 30.357 224 112 12 516 732 669 855 1.03e-13 75.9
Msa0718150 MtrunA17_Chr5g0441691 27.184 309 155 13 513 801 70 328 1.05e-13 75.1
Msa0718150 MtrunA17_Chr7g0245031 33.152 184 98 9 646 813 254 428 1.79e-13 73.9
Msa0718150 MtrunA17_Chr5g0423061 27.027 222 125 7 515 733 316 503 1.81e-13 74.3
Msa0718150 MtrunA17_Chr8g0338501 31.183 279 128 15 468 734 519 745 1.86e-13 74.7
Msa0718150 MtrunA17_Chr5g0405421 27.083 288 143 14 533 801 122 361 2.65e-13 73.9
Msa0718150 MtrunA17_Chr1g0150321 32.000 200 123 7 635 832 107 295 2.77e-13 73.2
Msa0718150 MtrunA17_Chr1g0206391 25.072 347 184 16 516 850 46 328 3.02e-13 72.4
Msa0718150 MtrunA17_Chr1g0209391 26.457 223 126 6 514 733 303 490 3.42e-13 73.6
Msa0718150 MtrunA17_Chr8g0376131 27.468 233 127 10 516 742 57 253 3.51e-13 72.8
Msa0718150 MtrunA17_Chr5g0428571 27.239 268 150 10 516 774 304 535 4.09e-13 73.2
Msa0718150 MtrunA17_Chr2g0314821 28.326 233 124 10 516 742 669 864 4.35e-13 73.6
Msa0718150 MtrunA17_Chr2g0284011 23.948 309 158 10 521 797 3 266 4.72e-13 72.4
Msa0718150 MtrunA17_Chr4g0029241 31.507 146 92 5 642 785 227 366 5.99e-13 72.0
Msa0718150 MtrunA17_Chr2g0333821 35.758 165 98 7 642 803 115 274 6.18e-13 72.0
Msa0718150 MtrunA17_Chr5g0428581 27.632 228 121 9 514 734 48 238 7.00e-13 71.6
Msa0718150 MtrunA17_Chr4g0049601 30.460 174 93 7 643 793 460 628 8.74e-13 72.4
Msa0718150 MtrunA17_Chr5g0424501 27.397 292 151 14 517 794 198 442 1.28e-12 71.2
Msa0718150 MtrunA17_Chr2g0286501 27.875 287 154 14 530 804 63 308 1.94e-12 71.6
Msa0718150 MtrunA17_Chr2g0314841 27.897 233 125 10 516 742 666 861 2.01e-12 71.6
Msa0718150 MtrunA17_Chr8g0379931 25.581 301 162 12 516 793 715 976 2.10e-12 71.6
Msa0718150 MtrunA17_Chr2g0312571 27.376 263 144 12 516 765 51 279 2.29e-12 70.5
Msa0718150 MtrunA17_Chr7g0226891 28.623 276 140 14 514 771 53 289 2.31e-12 70.1
Msa0718150 MtrunA17_Chr5g0443531 28.571 224 117 11 516 732 682 869 2.98e-12 70.9
Msa0718150 MtrunA17_Chr1g0166101 33.333 168 105 5 635 800 120 282 3.10e-12 69.7
Msa0718150 MtrunA17_Chr8g0338471 31.541 279 129 16 468 734 486 714 3.59e-12 70.5
Msa0718150 MtrunA17_Chr5g0424651 27.397 292 151 14 517 794 327 571 3.86e-12 70.1
Msa0718150 MtrunA17_Chr2g0315081 25.368 272 147 10 513 774 656 881 3.87e-12 70.5
Msa0718150 MtrunA17_Chr4g0038501 26.910 301 168 13 512 803 21 278 3.91e-12 70.9
Msa0718150 MtrunA17_Chr5g0424581 27.397 292 151 14 517 794 131 375 4.22e-12 69.3
Msa0718150 MtrunA17_Chr2g0312561 26.033 242 136 9 513 748 45 249 4.33e-12 68.9
Msa0718150 MtrunA17_Chr2g0299991 25.649 308 155 13 515 796 74 333 4.67e-12 68.9
Msa0718150 MtrunA17_Chr4g0000431 27.488 211 122 7 633 822 117 317 4.83e-12 70.1
Msa0718150 MtrunA17_Chr2g0326531 32.258 155 97 5 642 794 229 377 5.47e-12 68.9
Msa0718150 MtrunA17_Chr5g0428521 27.315 216 117 8 533 743 23 203 7.25e-12 66.2
Msa0718150 MtrunA17_Chr1g0172951 32.237 152 87 5 641 789 443 581 7.83e-12 69.3
Msa0718150 MtrunA17_Chr3g0129721 28.626 262 137 9 512 766 26 244 7.87e-12 67.4
Msa0718150 MtrunA17_Chr5g0426941 25.564 266 144 11 475 734 316 533 8.88e-12 68.9
Msa0718150 MtrunA17_Chr3g0132591 34.940 166 91 8 644 801 210 366 1.01e-11 68.6
Msa0718150 MtrunA17_Chr5g0433941 29.688 256 129 12 514 761 373 585 1.03e-11 68.9
Msa0718150 MtrunA17_Chr2g0280691 28.821 229 119 9 513 734 529 720 1.15e-11 68.9
Msa0718150 MtrunA17_Chr4g0070851 31.694 183 104 9 629 797 157 332 1.31e-11 67.4
Msa0718150 MtrunA17_Chr1g0213501 26.556 241 141 8 517 751 118 328 1.32e-11 67.8
Msa0718150 MtrunA17_Chr8g0338531 32.051 234 110 12 513 734 453 649 1.37e-11 68.6
Msa0718150 MtrunA17_Chr2g0288841 26.280 293 153 12 517 796 11 253 1.41e-11 67.8
Msa0718150 MtrunA17_Chr8g0358781 28.477 302 153 15 514 792 348 609 1.42e-11 68.6
Msa0718150 MtrunA17_Chr4g0038091 26.578 301 169 13 512 803 21 278 1.87e-11 68.6
Msa0718150 MtrunA17_Chr8g0358911 26.360 239 133 9 516 748 51 252 1.94e-11 67.0
Msa0718150 MtrunA17_Chr3g0081031 28.017 232 124 10 516 741 358 552 1.97e-11 68.2
Msa0718150 MtrunA17_Chr6g0450571 28.090 178 104 6 634 797 110 277 2.79e-11 67.4
Msa0718150 MtrunA17_Chr2g0314991 27.876 226 121 9 513 732 213 402 3.03e-11 67.8
Msa0718150 MtrunA17_Chr4g0069301 25.758 264 152 9 562 822 83 305 3.04e-11 66.6
Msa0718150 MtrunA17_Chr2g0324471 27.119 236 129 11 517 746 375 573 4.38e-11 67.0
Msa0718150 MtrunA17_Chr1g0180951 38.261 115 62 5 641 751 198 307 5.06e-11 65.9
Msa0718150 MtrunA17_Chr2g0280791 28.017 232 124 9 516 741 527 721 6.30e-11 66.6
Msa0718150 MtrunA17_Chr4g0025671 25.658 304 172 11 515 806 12 273 6.40e-11 66.6
Msa0718150 MtrunA17_Chr2g0280781 23.549 293 178 9 516 802 516 768 7.66e-11 66.2
Msa0718150 MtrunA17_Chr2g0280801 25.337 371 194 15 393 741 418 727 9.43e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0718150 AT2G17520.1 68.315 445 128 3 497 930 395 837 0.0 637
Msa0718150 AT5G24360.1 45.114 880 396 26 89 928 43 875 0.0 634
Msa0718150 AT5G24360.2 44.824 879 398 25 90 928 50 881 0.0 631
Msa0718150 AT5G24360.3 44.966 874 394 25 95 928 35 861 0.0 629
Msa0718150 AT3G11870.1 42.794 451 212 14 509 929 119 553 1.62e-95 312
Msa0718150 AT3G06030.1 28.571 266 146 8 535 796 104 329 1.58e-21 100
Msa0718150 AT1G54960.1 25.405 370 194 15 517 870 74 377 9.75e-19 92.0
Msa0718150 AT1G54960.2 25.405 370 194 15 517 870 74 377 9.75e-19 92.0
Msa0718150 AT1G09000.2 27.027 296 160 10 517 796 75 330 1.51e-18 91.3
Msa0718150 AT1G09000.1 27.027 296 160 10 517 796 75 330 1.99e-18 90.9
Msa0718150 AT3G59410.5 27.019 322 201 13 515 808 429 744 3.85e-16 84.3
Msa0718150 AT3G59410.2 27.019 322 201 13 515 808 453 768 4.33e-16 84.0
Msa0718150 AT3G59410.4 27.019 322 201 13 515 808 430 745 4.34e-16 84.0
Msa0718150 AT3G59410.1 27.019 322 201 13 515 808 429 744 4.45e-16 84.0
Msa0718150 AT3G59410.3 27.019 322 201 13 515 808 429 744 4.45e-16 84.0
Msa0718150 AT3G53930.2 27.795 331 178 13 503 818 13 297 6.15e-16 83.2
Msa0718150 AT3G53930.1 27.795 331 178 13 503 818 13 297 7.24e-16 82.8
Msa0718150 AT4G29810.1 27.961 304 151 14 515 797 74 330 2.70e-15 79.3
Msa0718150 AT4G29810.2 27.961 304 151 14 515 797 83 339 3.74e-15 79.0
Msa0718150 AT3G08720.1 32.512 203 113 9 646 833 246 439 5.23e-15 79.3
Msa0718150 AT3G08720.3 32.512 203 113 9 646 833 246 439 5.23e-15 79.3
Msa0718150 AT3G08720.4 32.512 203 113 9 646 833 246 439 5.23e-15 79.3
Msa0718150 AT3G08720.2 32.512 203 113 9 646 833 246 439 5.23e-15 79.3
Msa0718150 AT5G66210.6 28.621 290 136 16 533 801 85 324 7.09e-15 78.6
Msa0718150 AT5G66210.4 28.621 290 136 16 533 801 85 324 7.09e-15 78.6
Msa0718150 AT5G66210.3 30.070 286 137 16 533 801 85 324 7.78e-15 79.0
Msa0718150 AT5G66210.5 29.371 286 139 16 533 801 85 324 8.41e-15 78.6
Msa0718150 AT3G08730.1 33.333 183 98 9 646 813 240 413 1.31e-14 77.8
Msa0718150 AT3G08730.2 33.333 183 98 9 646 813 240 413 1.31e-14 77.8
Msa0718150 AT5G66210.1 30.070 286 137 16 533 801 85 324 1.61e-14 77.8
Msa0718150 AT5G66210.2 30.070 286 137 16 533 801 85 324 1.61e-14 77.8
Msa0718150 AT5G12180.1 27.508 309 154 13 513 801 75 333 1.79e-14 77.8
Msa0718150 AT2G34290.1 29.518 166 109 5 636 797 103 264 3.09e-14 74.3
Msa0718150 AT2G41140.1 25.278 360 208 12 464 804 76 393 3.72e-14 77.0
Msa0718150 AT2G05060.1 25.680 331 198 10 506 828 9 299 7.99e-14 73.9
Msa0718150 AT3G50530.1 26.421 299 164 11 513 795 150 408 8.73e-14 75.9
Msa0718150 AT5G35410.2 26.486 370 195 15 504 846 14 333 9.00e-14 74.7
Msa0718150 AT1G29730.1 32.599 227 107 13 513 732 643 830 1.05e-13 76.3
Msa0718150 AT5G24430.1 26.048 334 185 11 496 811 128 417 1.10e-13 75.5
Msa0718150 AT5G27790.1 28.191 188 122 5 636 813 122 306 1.20e-13 73.6
Msa0718150 AT1G51660.1 28.704 216 136 7 593 797 126 334 1.38e-13 73.9
Msa0718150 AT1G53440.1 27.928 222 120 7 516 732 672 858 1.49e-13 75.5
Msa0718150 AT1G29730.4 32.599 227 107 13 513 732 643 830 1.56e-13 75.5
Msa0718150 AT2G38490.1 35.260 173 96 7 632 797 119 282 1.70e-13 74.3
Msa0718150 AT3G45240.2 34.524 168 98 8 642 805 218 377 2.23e-13 73.6
Msa0718150 AT3G45240.1 34.524 168 98 8 642 805 218 377 2.23e-13 73.6
Msa0718150 AT4G30960.1 31.737 167 98 6 644 803 127 284 2.47e-13 73.9
Msa0718150 AT1G29730.2 31.718 227 108 13 513 732 676 862 2.89e-13 74.7
Msa0718150 AT3G56760.1 24.860 358 212 11 464 804 77 394 3.47e-13 73.9
Msa0718150 AT1G29730.3 33.480 227 104 13 513 732 676 862 3.76e-13 74.3
Msa0718150 AT4G29810.3 27.759 299 148 14 515 792 83 334 3.80e-13 72.4
Msa0718150 AT4G04695.1 26.214 309 176 13 507 801 24 294 4.23e-13 73.2
Msa0718150 AT5G45820.1 32.515 163 94 6 642 797 113 266 5.14e-13 72.8
Msa0718150 AT5G60550.1 30.726 179 110 6 625 795 196 368 1.01e-12 71.6
Msa0718150 AT1G56120.3 29.796 245 127 10 513 751 546 751 1.01e-12 72.8
Msa0718150 AT4G28350.1 26.490 302 158 12 517 793 355 617 1.07e-12 72.4
Msa0718150 AT1G56120.1 28.980 245 129 10 513 751 712 917 1.13e-12 72.8
Msa0718150 AT3G59350.6 26.829 246 134 8 517 751 134 344 1.15e-12 71.6
Msa0718150 AT1G56120.2 29.796 245 127 10 513 751 694 899 1.27e-12 72.8
Msa0718150 AT3G59350.3 28.049 246 131 9 517 751 119 329 1.31e-12 71.2
Msa0718150 AT3G59350.1 28.049 246 131 9 517 751 119 329 1.31e-12 71.2
Msa0718150 AT3G59350.4 28.049 246 131 9 517 751 119 329 1.32e-12 70.9
Msa0718150 AT3G13530.1 27.152 302 170 12 512 804 21 281 1.51e-12 72.4
Msa0718150 AT3G59350.2 28.049 246 131 9 517 751 77 287 1.52e-12 70.9
Msa0718150 AT4G21390.2 24.100 361 216 14 395 742 415 730 1.75e-12 72.0
Msa0718150 AT4G21390.1 24.100 361 216 14 395 742 415 730 1.91e-12 72.0
Msa0718150 AT3G53380.1 27.609 297 154 14 469 757 342 585 1.94e-12 71.6
Msa0718150 AT2G30740.5 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.2 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.10 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.11 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.6 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.15 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.4 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.14 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.7 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.1 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.13 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.8 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.12 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.3 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT2G30740.9 26.016 246 136 8 517 751 77 287 2.34e-12 70.1
Msa0718150 AT5G56580.1 31.176 170 100 6 638 796 167 330 2.42e-12 70.1
Msa0718150 AT5G14720.1 27.933 179 105 6 633 797 109 277 3.27e-12 70.9
Msa0718150 AT5G14720.2 27.933 179 105 6 633 797 109 277 3.27e-12 70.9
Msa0718150 AT4G31170.7 24.746 295 164 12 513 793 133 383 3.70e-12 70.1
Msa0718150 AT4G31170.6 24.746 295 164 12 513 793 133 383 3.70e-12 70.1
Msa0718150 AT4G31170.5 24.746 295 164 12 513 793 133 383 3.70e-12 70.1
Msa0718150 AT4G31170.1 24.746 295 164 12 513 793 133 383 3.70e-12 70.1
Msa0718150 AT4G31170.2 24.746 295 164 12 513 793 133 383 3.70e-12 70.1
Msa0718150 AT4G31170.3 24.746 295 164 12 513 793 133 383 3.70e-12 70.1
Msa0718150 AT4G31170.8 24.746 295 164 12 513 793 133 383 3.70e-12 70.1
Msa0718150 AT3G45240.3 34.524 168 95 9 642 805 218 374 3.76e-12 69.7
Msa0718150 AT5G55090.1 29.518 166 104 5 636 797 100 256 3.93e-12 70.1
Msa0718150 AT2G47060.6 37.097 124 66 5 636 751 50 169 3.93e-12 67.8
Msa0718150 AT2G30360.1 26.199 271 145 9 562 825 79 301 4.69e-12 69.7
Msa0718150 AT3G49370.1 25.552 317 174 12 513 811 144 416 6.44e-12 69.7
Msa0718150 AT4G14580.1 33.333 171 97 8 642 805 124 284 6.76e-12 69.3
Msa0718150 AT5G55090.2 29.697 165 103 5 636 796 162 317 6.79e-12 69.7
Msa0718150 AT2G47060.5 37.097 124 66 5 636 751 168 287 6.93e-12 68.2
Msa0718150 AT3G54180.1 28.723 188 101 7 639 797 118 301 7.61e-12 67.8
Msa0718150 AT1G54510.4 26.190 294 159 11 515 795 8 256 7.79e-12 69.7
Msa0718150 AT1G54510.2 26.190 294 159 11 515 795 8 256 7.79e-12 69.7
Msa0718150 AT1G54510.1 26.190 294 159 11 515 795 8 256 7.79e-12 69.7
Msa0718150 AT1G54510.3 26.190 294 159 11 515 795 8 256 7.79e-12 69.7
Msa0718150 AT2G47060.3 37.097 124 66 5 636 751 69 188 7.89e-12 67.4
Msa0718150 AT3G07980.2 26.246 301 174 11 512 804 21 281 8.31e-12 70.1
Msa0718150 AT2G25090.1 32.948 173 99 7 636 797 112 278 9.04e-12 68.9
Msa0718150 AT3G07980.1 26.246 301 174 11 512 804 21 281 9.81e-12 69.7
Msa0718150 AT1G06700.1 25.610 246 137 8 517 751 74 284 1.01e-11 68.2
Msa0718150 AT1G06700.3 25.610 246 137 8 517 751 74 284 1.01e-11 68.2
Msa0718150 AT1G06700.2 25.610 246 137 8 517 751 74 284 1.01e-11 68.2
Msa0718150 AT2G43230.2 34.677 124 69 5 636 751 242 361 1.12e-11 68.6
Msa0718150 AT2G47060.2 37.097 124 66 5 636 751 168 287 1.26e-11 67.8
Msa0718150 AT2G47060.1 37.097 124 66 5 636 751 168 287 1.26e-11 67.8
Msa0718150 AT2G47060.4 37.097 124 66 5 636 751 168 287 1.28e-11 68.2
Msa0718150 AT2G43230.1 34.677 124 69 5 636 751 208 327 1.30e-11 68.2
Msa0718150 AT5G20930.1 34.940 166 90 7 647 797 521 683 1.47e-11 68.9
Msa0718150 AT2G41930.1 29.944 177 100 6 645 805 116 284 1.74e-11 67.4
Msa0718150 AT5G18700.1 27.986 293 142 14 530 804 18 259 1.78e-11 68.9
Msa0718150 AT1G29740.2 29.956 227 112 12 513 732 680 866 2.10e-11 68.6
Msa0718150 AT1G29740.1 29.956 227 112 12 513 732 680 866 2.90e-11 68.2
Msa0718150 AT1G70130.1 37.273 110 61 4 641 747 434 538 2.91e-11 67.8
Msa0718150 AT1G70530.1 25.751 233 130 9 516 742 328 523 3.30e-11 67.8
Msa0718150 AT1G16670.1 28.033 239 131 10 516 748 46 249 3.58e-11 66.6
Msa0718150 AT4G01330.1 28.213 319 160 18 517 805 168 447 4.47e-11 67.0
Msa0718150 AT2G38620.4 31.200 125 74 5 614 733 32 149 4.49e-11 64.7
Msa0718150 AT2G42550.1 29.167 168 115 4 630 794 105 271 6.04e-11 65.5
Msa0718150 AT2G28940.1 32.597 181 93 8 636 792 90 265 6.56e-11 65.5
Msa0718150 AT4G26890.1 25.614 285 166 10 517 797 11 253 6.79e-11 66.2
Msa0718150 AT2G28940.2 32.597 181 93 8 636 792 209 384 7.07e-11 66.2
Msa0718150 AT1G70530.2 25.751 233 130 9 516 742 328 523 7.16e-11 66.2
Msa0718150 AT4G21380.1 24.709 344 196 12 425 755 447 740 7.70e-11 66.6
Msa0718150 AT1G29750.2 25.745 369 195 16 516 873 686 986 8.38e-11 66.6
Msa0718150 AT3G62220.2 35.484 124 68 5 636 751 71 190 9.13e-11 63.9
Msa0718150 AT1G29750.1 25.745 369 195 16 516 873 671 971 9.88e-11 66.6

Find 231 sgRNAs with CRISPR-Local

Find 465 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTAACAGGGATGTGGTTTC+TGG 0.073089 5_1:-12324763 Msa0718150:intron
CCTTGATTAACAAAACATTT+TGG 0.102471 5_1:+12324692 None:intergenic
ATTACATAACTTTGGTAATT+TGG 0.147294 5_1:+12321934 None:intergenic
TATTGCATCATCCTCTATTT+TGG 0.157470 5_1:-12322968 Msa0718150:CDS
CATCCTTCTGTGCCTCTATT+TGG 0.161498 5_1:+12325619 None:intergenic
CCATACCATCGAACAATATT+TGG 0.183296 5_1:+12325783 None:intergenic
ATGTGCCAAACTTTCTGATA+TGG 0.210133 5_1:-12324659 Msa0718150:CDS
TATCTTGTTGAAAGTGCTTC+TGG 0.224454 5_1:-12328029 Msa0718150:CDS
CACTGGCTTTAGGTGCAAAA+TGG 0.234573 5_1:-12322839 Msa0718150:CDS
CAAGAAGAAACCTGAATTTC+TGG 0.245839 5_1:+12322693 None:intergenic
TGAATTGTCAATGTCATTAT+TGG 0.250222 5_1:-12326201 Msa0718150:CDS
AGCGCCAGAGCAGCTTCTTC+AGG 0.253007 5_1:-12324211 Msa0718150:CDS
AAGACATAATTCATGGGTTT+TGG 0.253698 5_1:+12328310 None:intergenic
TTGCCAACATTGGTCGTTAC+AGG 0.255444 5_1:-12322791 Msa0718150:CDS
AGTCAGAAGCAATGAGGTTT+TGG 0.260881 5_1:+12325811 None:intergenic
GGAATTGCCTCCAGAAATTC+AGG 0.269943 5_1:-12322703 Msa0718150:intron
GTGCTTCTGGGAGGGTAATT+TGG 0.274259 5_1:-12328016 Msa0718150:CDS
TTGCACTATAATAATGTTAA+TGG 0.279884 5_1:-12325981 Msa0718150:CDS
ATCCTTCTGTGCCTCTATTT+GGG 0.283774 5_1:+12325620 None:intergenic
TTCAAATACAGTGCTCCTTT+TGG 0.285333 5_1:+12326925 None:intergenic
TGTATTCCTCTTGGTGATAA+AGG 0.290755 5_1:-12322000 Msa0718150:three_prime_UTR
GCCAATACTCCTCCGTCTTC+TGG 0.291254 5_1:-12327957 Msa0718150:CDS
CTTGAAGACATGTCTTCTTT+AGG 0.296981 5_1:-12324619 Msa0718150:CDS
GAAGAGAGAGTTGTTGGGAT+TGG 0.304464 5_1:+12328171 None:intergenic
CAGCAGCACCATAGCTTCTA+AGG 0.306346 5_1:+12326879 None:intergenic
CAATCTGTGGGTCCTGGTTC+AGG 0.308571 5_1:-12326698 Msa0718150:CDS
TCTGGTAAATTAAGCTTTGC+TGG 0.311021 5_1:+12326758 None:intergenic
TCAAATCTGAGTCACTGATT+TGG 0.321448 5_1:+12326108 None:intergenic
CGACTTCCGTGCAAATAATA+AGG 0.322120 5_1:-12326792 Msa0718150:CDS
AATAATCAGTCCTAACTATC+TGG 0.327755 5_1:+12326726 None:intergenic
AAGAGAGAGTTGTTGGGATT+GGG 0.331180 5_1:+12328172 None:intergenic
TTTGCAGGCTGTGGCAGTTC+GGG 0.343692 5_1:-12324240 Msa0718150:intron
ATGTTTAATCCAGTGTTTAG+AGG 0.355509 5_1:-12322073 Msa0718150:three_prime_UTR
TTGGGATTGGGAGGTGGGGA+TGG 0.357454 5_1:+12328184 None:intergenic
GAAATTAGATCCTCTGCTTC+AGG 0.359545 5_1:+12324039 None:intergenic
GAGTTGTTGGGATTGGGAGG+TGG 0.362318 5_1:+12328178 None:intergenic
AATCCCCATATCAGAAAGTT+TGG 0.368474 5_1:+12324654 None:intergenic
TGCTGTCAAACGTCTTGTTC+AGG 0.374660 5_1:-12325862 Msa0718150:CDS
ATTTGCAGGCTGTGGCAGTT+CGG 0.379266 5_1:-12324241 Msa0718150:intron
TAAACCCTGACCCCAATCTA+AGG 0.380736 5_1:-12324008 Msa0718150:intron
TGGCATTCCATCATAACTTT+GGG 0.382087 5_1:+12322095 None:intergenic
ATTAGCCTTGATCATATAGA+TGG 0.382386 5_1:-12322220 Msa0718150:three_prime_UTR
ATGGCATTCCATCATAACTT+TGG 0.386160 5_1:+12322094 None:intergenic
TGTGCCAAACTTTCTGATAT+GGG 0.386739 5_1:-12324658 Msa0718150:CDS
AGCACTGCTCCACTGGCTTT+AGG 0.386884 5_1:-12322849 Msa0718150:CDS
AGTTGTTGGGATTGGGAGGT+GGG 0.387353 5_1:+12328179 None:intergenic
AGGATGATATGCAATGTCTT+TGG 0.391060 5_1:-12325602 Msa0718150:CDS
TGTACTCACCAGTAGAACTA+TGG 0.395638 5_1:+12324596 None:intergenic
TCTTTAGGCCATAGTTCTAC+TGG 0.397728 5_1:-12324604 Msa0718150:intron
CCAGCCACCAGTGCCGTAAC+AGG 0.398229 5_1:+12328068 None:intergenic
GCCGTTAGTTTCGAATTCAT+TGG 0.398371 5_1:-12328099 Msa0718150:CDS
CTCATCAACTTTAGTAAAAG+TGG 0.398970 5_1:+12325558 None:intergenic
GGGAGAAATCTATCACTCTT+AGG 0.405694 5_1:+12326374 None:intergenic
TGGAAGCATCAGCTTTAAAT+CGG 0.409181 5_1:+12326403 None:intergenic
CCAAATATTGTTCGATGGTA+TGG 0.409739 5_1:-12325783 Msa0718150:CDS
CGCTCAAGTCGCTCTCCAAA+TGG 0.414653 5_1:+12324114 None:intergenic
TGCAATACTTCAATCGCCTT+TGG 0.414925 5_1:+12322984 None:intergenic
GCTGTAGATTTGTTTAGTTT+AGG 0.415194 5_1:-12324174 Msa0718150:CDS
TTAGTATATAATACATTAGT+GGG 0.416536 5_1:-12322025 Msa0718150:three_prime_UTR
TGGAATCAAGACATAATTCA+TGG 0.417725 5_1:+12328303 None:intergenic
CGTCCCTGAAGAAGCTGCTC+TGG 0.418016 5_1:+12324207 None:intergenic
CTAACAGGGATGTGGTTTCT+GGG 0.419910 5_1:-12324762 Msa0718150:intron
ATCTTGTTGAAAGTGCTTCT+GGG 0.421491 5_1:-12328028 Msa0718150:CDS
TTATTCCTAGTTCATGCAAA+TGG 0.423327 5_1:+12324734 None:intergenic
TCATTGAATCCTTCCGGAAC+AGG 0.425832 5_1:+12322355 None:intergenic
AAGTAGTCATTGAATCCTTC+CGG 0.429425 5_1:+12322349 None:intergenic
GGTGGAAGAGCGGGAGGAGA+GGG 0.433108 5_1:+12328131 None:intergenic
GGAACTGATAGGACCTGTTC+CGG 0.436582 5_1:-12322368 Msa0718150:CDS
TTATGAATGTAAAGATAATC+TGG 0.436903 5_1:+12322154 None:intergenic
TGCATTACCATTACTATCAT+AGG 0.440736 5_1:+12326289 None:intergenic
CAAACAGAAAATTCTTTCGT+TGG 0.441930 5_1:+12326492 None:intergenic
CAAGGGAAGTTGATCTGAGC+AGG 0.442572 5_1:-12326229 Msa0718150:CDS
GAGAATGACATACCTTAGAT+TGG 0.442945 5_1:+12323996 None:intergenic
GACCTTCATATATCCCTTCA+AGG 0.444624 5_1:+12325892 None:intergenic
ACAAATCTACAGCCCGTGTT+TGG 0.446120 5_1:+12324184 None:intergenic
AGAATGACATACCTTAGATT+GGG 0.447622 5_1:+12323997 None:intergenic
ATTCTAACCCAAAGTTATGA+TGG 0.449481 5_1:-12322102 Msa0718150:three_prime_UTR
TGCAAAATGGGACGAAAAGA+TGG 0.452150 5_1:-12322826 Msa0718150:CDS
ATCAGCTTTAAATCGGGCAT+TGG 0.453000 5_1:+12326410 None:intergenic
GACGATGGCGGTGGAAGAGC+GGG 0.455649 5_1:+12328122 None:intergenic
ACCAGAAGACGGAGGAGTAT+TGG 0.457722 5_1:+12327956 None:intergenic
TTTGAAGTGGATGCTAAAAC+AGG 0.459175 5_1:-12326908 Msa0718150:CDS
ATCTTTCATGATCCCCACTT+TGG 0.459310 5_1:-12327903 Msa0718150:CDS
CCTGTTACGGCACTGGTGGC+TGG 0.460610 5_1:-12328068 Msa0718150:CDS
TCAGCTTTAAATCGGGCATT+GGG 0.460946 5_1:+12326411 None:intergenic
AATATCAGTTGCTATGTTAG+AGG 0.461212 5_1:-12321914 Msa0718150:three_prime_UTR
GCGCCAGAGCAGCTTCTTCA+GGG 0.464230 5_1:-12324210 Msa0718150:CDS
ATTAGTATATAATACATTAG+TGG 0.464242 5_1:-12322026 Msa0718150:three_prime_UTR
TGTGGAGAAGAGAGAGTTGT+TGG 0.464412 5_1:+12328165 None:intergenic
GTTGTTGGGATTGGGAGGTG+GGG 0.464952 5_1:+12328180 None:intergenic
TGGCTTGATAGTTTATCAAA+TGG 0.465117 5_1:-12322200 Msa0718150:three_prime_UTR
TTATTGAATGTGGTGATGAC+TGG 0.466806 5_1:-12327932 Msa0718150:CDS
ACATACCTTAGATTGGGGTC+AGG 0.467825 5_1:+12324003 None:intergenic
CCTTGGTGCAGTGATCTCCA+TGG 0.468092 5_1:+12326247 None:intergenic
TGGCAAATGGCAACTGGTTG+AGG 0.471801 5_1:+12322131 None:intergenic
CGGTGGAAGAGCGGGAGGAG+AGG 0.473712 5_1:+12328130 None:intergenic
AATCAGTGGCAAATGGCAAC+TGG 0.474370 5_1:+12322125 None:intergenic
CTTGTCCATTTGCATGAACT+AGG 0.476007 5_1:-12324739 Msa0718150:CDS
ATTAGAGAGCACTGCTCCAC+TGG 0.476795 5_1:-12322856 Msa0718150:CDS
CTGGTTTATCAGGAACTGAT+AGG 0.478342 5_1:-12322379 Msa0718150:intron
GTGGAGAAGAGAGAGTTGTT+GGG 0.481274 5_1:+12328166 None:intergenic
TGATCCCCACTTTGGTAAAA+CGG 0.481566 5_1:-12327895 Msa0718150:intron
CTGCTCAGATCAACTTCCCT+TGG 0.482122 5_1:+12326230 None:intergenic
GCTCCATCTTTCGACACAAT+AGG 0.482665 5_1:+12326962 None:intergenic
CAGGCTGTGGCAGTTCGGGT+TGG 0.484799 5_1:-12324236 Msa0718150:CDS
CATCATATTACCACCATGAC+CGG 0.489087 5_1:+12326352 None:intergenic
ACAGCAGGAAGACATCCATT+TGG 0.490940 5_1:-12324129 Msa0718150:CDS
ACGCCTATTGTGTCGAAAGA+TGG 0.491151 5_1:-12326965 Msa0718150:CDS
CAACTGATATTACATAACTT+TGG 0.491541 5_1:+12321926 None:intergenic
ATCTCAGAACTCCAAAATAG+AGG 0.492786 5_1:+12322957 None:intergenic
GGAGAATATACAAATTCATA+AGG 0.493846 5_1:-12326024 Msa0718150:CDS
ACTGGCTTTAGGTGCAAAAT+GGG 0.494715 5_1:-12322838 Msa0718150:CDS
TTCTTCAGGGACGCCAAACA+CGG 0.496323 5_1:-12324197 Msa0718150:CDS
AATGGCACCATTGTCCTTGA+AGG 0.500351 5_1:-12325906 Msa0718150:CDS
TAGTGGGATTGTATTCCTCT+TGG 0.504542 5_1:-12322009 Msa0718150:three_prime_UTR
AAAGATGGAGCTGTTATACT+TGG 0.504620 5_1:-12326950 Msa0718150:CDS
GAAGAAGATGAAGATTGAAA+CGG 0.505506 5_1:+12328244 None:intergenic
CTATCACTCTTAGGTTGTGA+TGG 0.506586 5_1:+12326383 None:intergenic
GGATACATCTGCAACGATGC+AGG 0.506692 5_1:+12328205 None:intergenic
CAGAAAACCTGTTACGGCAC+TGG 0.509659 5_1:-12328075 Msa0718150:CDS
ACAGCGTCCGAGACTTGTTG+AGG 0.510213 5_1:-12322755 Msa0718150:CDS
CCAGCTTTCATTGCCAACAT+TGG 0.511232 5_1:-12322801 Msa0718150:CDS
CCAATGTTGGCAATGAAAGC+TGG 0.511372 5_1:+12322801 None:intergenic
CTGGTTCAGGAATAGTGTTA+TGG 0.511777 5_1:-12326685 Msa0718150:CDS
TTAGAATAATCAGTGGCAAA+TGG 0.512185 5_1:+12322118 None:intergenic
GGAAAGCTCCTTAGAAGCTA+TGG 0.513931 5_1:-12326887 Msa0718150:CDS
TTCAGATTTGTCAGAAAACT+CGG 0.515086 5_1:-12325682 Msa0718150:CDS
GGAGCGTTGTGCATGCAACT+TGG 0.515887 5_1:-12325724 Msa0718150:CDS
AGAGAGTTGTTGGGATTGGG+AGG 0.517951 5_1:+12328175 None:intergenic
TTTGTCCGCTAACAGGGATG+TGG 0.520070 5_1:-12324770 Msa0718150:intron
ACTTTGCAAGTCGATTTCCT+AGG 0.520525 5_1:-12322330 Msa0718150:CDS
TTAAATAAAGAAATCGCAAA+GGG 0.522398 5_1:-12325933 Msa0718150:CDS
ATTGGACAGAAAACCTGTTA+CGG 0.523174 5_1:-12328081 Msa0718150:CDS
CATACCTTAGATTGGGGTCA+GGG 0.524041 5_1:+12324004 None:intergenic
GATAGATTTCTCCCCGGTCA+TGG 0.524362 5_1:-12326365 Msa0718150:CDS
AACTTTAGTAAAAGTGGAGA+TGG 0.524497 5_1:+12325564 None:intergenic
ATCATATTACCACCATGACC+GGG 0.528935 5_1:+12326353 None:intergenic
ATATAATTTGGCACAGGCAC+AGG 0.528971 5_1:+12326326 None:intergenic
TCAAGCCATCTATATGATCA+AGG 0.531790 5_1:+12322215 None:intergenic
TTCATCCAAATATTGTTCGA+TGG 0.531830 5_1:-12325788 Msa0718150:CDS
GGCTGCATATAATTTGGCAC+AGG 0.532445 5_1:+12326320 None:intergenic
CTGTTATACTTGGATCCAAA+AGG 0.532478 5_1:-12326940 Msa0718150:CDS
CTTGGTGCAGTGATCTCCAT+GGG 0.533813 5_1:+12326248 None:intergenic
GAAATCGCAAAGGGAAGTAA+TGG 0.534963 5_1:-12325924 Msa0718150:CDS
GTTGATGCTTATCAAGAGAA+AGG 0.535298 5_1:-12326440 Msa0718150:CDS
TCATTTAATTGTCAGGCCAA+AGG 0.535570 5_1:-12323000 Msa0718150:intron
GGCCCAAATAGAGGCACAGA+AGG 0.535622 5_1:-12325622 Msa0718150:CDS
GCACTGGTGGCTGGTTTAGA+CGG 0.536256 5_1:-12328059 Msa0718150:CDS
GTGATCTCCATGGGAGGCTG+CGG 0.539014 5_1:+12326257 None:intergenic
GTGCCAAACTTTCTGATATG+GGG 0.540780 5_1:-12324657 Msa0718150:CDS
TGCATCAAGTGAAGCTGTCA+AGG 0.545531 5_1:+12326604 None:intergenic
AATGTTAATGGACGCAGGAT+CGG 0.546974 5_1:-12325969 Msa0718150:CDS
CAAGCTCCTTATTATTTGCA+CGG 0.551838 5_1:+12326786 None:intergenic
TCATGACCCTCAACAAGTCT+CGG 0.551931 5_1:+12322748 None:intergenic
GGAAGCATCAGCTTTAAATC+GGG 0.552574 5_1:+12326404 None:intergenic
TCATAAGGAAGCAGAAAATG+AGG 0.553230 5_1:-12326009 Msa0718150:CDS
CAATGTCTTTGGAAATCGAA+TGG 0.553385 5_1:-12325591 Msa0718150:CDS
GTCCTTGAAGGGATATATGA+AGG 0.553647 5_1:-12325894 Msa0718150:CDS
AAAATCACCTATGATAGTAA+TGG 0.555445 5_1:-12326296 Msa0718150:CDS
TCTTCAGGGACGCCAAACAC+GGG 0.556320 5_1:-12324196 Msa0718150:CDS
TTCGAAACTAACGGCGACGA+TGG 0.557382 5_1:+12328107 None:intergenic
ATTATTGGTTGTATTATCTG+TGG 0.560576 5_1:-12326186 Msa0718150:CDS
AGAGTTTCTTCCTGAAGCAG+AGG 0.562454 5_1:-12324049 Msa0718150:CDS
TATGCTTCCGCAGCCTCCCA+TGG 0.564293 5_1:-12326264 Msa0718150:CDS
TTATGATGTTGACAGTGGCT+TGG 0.565769 5_1:-12326567 Msa0718150:CDS
TACACTTCAATCAAGAGCCT+AGG 0.567714 5_1:+12322313 None:intergenic
AAGGAGCACTGTATTTGAAG+TGG 0.567852 5_1:-12326921 Msa0718150:CDS
GGAATCAAGACATAATTCAT+GGG 0.568705 5_1:+12328304 None:intergenic
AGACGGAGGAGTATTGGCAG+AGG 0.569421 5_1:+12327962 None:intergenic
ACAGCTTCACTTGATGCAGA+AGG 0.569623 5_1:-12326599 Msa0718150:CDS
TTGAAACCTGCAGAGACTCA+AGG 0.571885 5_1:-12327014 Msa0718150:intron
ACTAACGGCGACGATGGCGG+TGG 0.573193 5_1:+12328113 None:intergenic
TGTTGAAAGTGCTTCTGGGA+GGG 0.574803 5_1:-12328024 Msa0718150:CDS
TTTCTGTCAGGACACGCATA+CGG 0.575186 5_1:+12326533 None:intergenic
CAGCGTCCGAGACTTGTTGA+GGG 0.579276 5_1:-12322754 Msa0718150:CDS
TCGCCTGTAACGACCAATGT+TGG 0.582138 5_1:+12322788 None:intergenic
ATCAGTTGCTATGTTAGAGG+TGG 0.583729 5_1:-12321911 Msa0718150:three_prime_UTR
GAGGAGTATTGGCAGAGGAA+TGG 0.586760 5_1:+12327967 None:intergenic
GTTTATCAAATGGCAAAGAA+CGG 0.587259 5_1:-12322190 Msa0718150:three_prime_UTR
TATTGAATGTGGTGATGACT+GGG 0.590060 5_1:-12327931 Msa0718150:CDS
CATAACACTATTCCTGAACC+AGG 0.594376 5_1:+12326686 None:intergenic
CGACGATGGCGGTGGAAGAG+CGG 0.595776 5_1:+12328121 None:intergenic
TCAAGTGAAGCTGTCAAGGT+AGG 0.598978 5_1:+12326608 None:intergenic
TCTTCTGGTCTTATTGAATG+TGG 0.602348 5_1:-12327942 Msa0718150:CDS
ATGGCACCATTGTCCTTGAA+GGG 0.603709 5_1:-12325905 Msa0718150:CDS
CATGGAGATCACTGCACCAA+GGG 0.603861 5_1:-12326246 Msa0718150:CDS
TATGTCAGTAGCTGAATTTG+AGG 0.604011 5_1:-12326660 Msa0718150:CDS
TAGTTGAATCCTCTAAACAC+TGG 0.607124 5_1:+12322064 None:intergenic
ATTAAATAAAGAAATCGCAA+AGG 0.608576 5_1:-12325934 Msa0718150:CDS
ATGTTAGAGGTGGAGATCGA+CGG 0.610075 5_1:-12321901 Msa0718150:three_prime_UTR
ATATATCCCTTCAAGGACAA+TGG 0.611274 5_1:+12325899 None:intergenic
ACAGTTCCTTTATCACCAAG+AGG 0.611346 5_1:+12321994 None:intergenic
TCCAATGAATTCGAAACTAA+CGG 0.611494 5_1:+12328098 None:intergenic
GATGAAAGTCAGAAGCAATG+AGG 0.611513 5_1:+12325805 None:intergenic
TTGGCAGAGGAATGGTAGAT+CGG 0.614229 5_1:+12327975 None:intergenic
ATGCACAACGCTCCAGAGCA+AGG 0.615402 5_1:+12325733 None:intergenic
ATAATAATGTTAATGGACGC+AGG 0.616006 5_1:-12325974 Msa0718150:CDS
AGTTATCTGCAACTACTGCA+AGG 0.617433 5_1:-12322287 Msa0718150:CDS
TTTGGAGAGCGACTTGAGCG+TGG 0.619926 5_1:-12324111 Msa0718150:CDS
ATGAACTAGGAATAATACAC+CGG 0.621550 5_1:-12324726 Msa0718150:CDS
GATGGCGGTGGAAGAGCGGG+AGG 0.623526 5_1:+12328125 None:intergenic
CTGATAGGACCTGTTCCGGA+AGG 0.623740 5_1:-12322364 Msa0718150:CDS
AAAACCTGTTACGGCACTGG+TGG 0.625351 5_1:-12328072 Msa0718150:CDS
GAGAGGGAGAGAAACCGTTG+TGG 0.628592 5_1:+12328147 None:intergenic
TCTACTACTGCAATGTGGAG+TGG 0.629640 5_1:-12326842 Msa0718150:CDS
TTGAAGGGATATATGAAGGT+CGG 0.632387 5_1:-12325890 Msa0718150:CDS
AACAGCAACATAATCAGCAA+CGG 0.639691 5_1:+12326988 None:intergenic
TGCAATGTGGAGTGGTGACA+AGG 0.646125 5_1:-12326834 Msa0718150:CDS
GGTGCAGTGATCTCCATGGG+AGG 0.646808 5_1:+12326251 None:intergenic
AAGGGAAGTTGATCTGAGCA+GGG 0.657506 5_1:-12326228 Msa0718150:CDS
TTGTTGAAAGTGCTTCTGGG+AGG 0.658498 5_1:-12328025 Msa0718150:CDS
GAAACTAACGGCGACGATGG+CGG 0.659977 5_1:+12328110 None:intergenic
CCATGGAGATCACTGCACCA+AGG 0.661190 5_1:-12326247 Msa0718150:CDS
TCTAAACACTGGATTAAACA+TGG 0.663613 5_1:+12322075 None:intergenic
GAATGACATACCTTAGATTG+GGG 0.664281 5_1:+12323998 None:intergenic
CTTTGGGTTAGAATAATCAG+TGG 0.664413 5_1:+12322111 None:intergenic
AAGAGTGATAGATTTCTCCC+CGG 0.666927 5_1:-12326371 Msa0718150:CDS
GAAGAAACCTGAATTTCTGG+AGG 0.674226 5_1:+12322696 None:intergenic
AGGAAGCAGAAAATGAGGCA+CGG 0.679814 5_1:-12326004 Msa0718150:CDS
AGATTTCTCCCCGGTCATGG+TGG 0.682682 5_1:-12326362 Msa0718150:CDS
TCGCGACGTTAGTGACAGAG+TGG 0.683668 5_1:-12322919 Msa0718150:CDS
CAACTCTCTCTTCTCCACAA+CGG 0.685419 5_1:-12328161 Msa0718150:CDS
TGAACTAGGAATAATACACC+GGG 0.688701 5_1:-12324725 Msa0718150:CDS
ATGTTTCTACTACTGCAATG+TGG 0.690754 5_1:-12326847 Msa0718150:CDS
TCATATTACCACCATGACCG+GGG 0.691294 5_1:+12326354 None:intergenic
TATTGTTCGATGGTATGGTG+TGG 0.697518 5_1:-12325778 Msa0718150:CDS
CATTCAATAAGACCAGAAGA+CGG 0.705732 5_1:+12327945 None:intergenic
TATGCTTATGATGTTGACAG+TGG 0.706219 5_1:-12326572 Msa0718150:CDS
GAGTGGTGACAAGGACAGTG+AGG 0.708835 5_1:-12326825 Msa0718150:CDS
TCAATAAGACCAGAAGACGG+AGG 0.754525 5_1:+12327948 None:intergenic
AGTGGTGACAAGGACAGTGA+GGG 0.770404 5_1:-12326824 Msa0718150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATAAAATAAAAAT+AGG + chr5_1:12325479-12325498 None:intergenic 0.0%
!!! TTATTTTTTTACTTTTACTT+TGG - chr5_1:12322442-12322461 Msa0718150:intron 10.0%
!!! TATTTTTTTACTTTTACTTT+GGG - chr5_1:12322443-12322462 Msa0718150:intron 10.0%
!! AAAAAAAAAAATATCTAGGA+AGG + chr5_1:12324803-12324822 None:intergenic 15.0%
!! TTTATATGATTATTCAGTTA+TGG - chr5_1:12325020-12325039 Msa0718150:intron 15.0%
!! TTATATGATTATTCAGTTAT+GGG - chr5_1:12325021-12325040 Msa0718150:intron 15.0%
!! TTTATATTAATATGTAGTGA+TGG - chr5_1:12326529-12326548 Msa0718150:CDS 15.0%
!!! AATTTTTTCATTTAATTGTC+AGG - chr5_1:12327281-12327300 Msa0718150:intron 15.0%
!! TTAGAAAAATAGAAAATGTT+TGG + chr5_1:12327746-12327765 None:intergenic 15.0%
!! ATTAGTATATAATACATTAG+TGG - chr5_1:12328262-12328281 Msa0718150:CDS 15.0%
!! TTAGTATATAATACATTAGT+GGG - chr5_1:12328263-12328282 Msa0718150:CDS 15.0%
!!! TTTTTCGGTTTTTAAGATTT+TGG + chr5_1:12321958-12321977 None:intergenic 20.0%
!!! TGATTTTGATTGAATTGTTT+AGG - chr5_1:12322510-12322529 Msa0718150:intron 20.0%
!!! GATTTTAGTTAAAATTGAGT+TGG - chr5_1:12322539-12322558 Msa0718150:intron 20.0%
!!! TTTTATGTATAAGCTATTTC+TGG - chr5_1:12322852-12322871 Msa0718150:CDS 20.0%
!!! CAACTTTAAAATGTAACTTA+AGG + chr5_1:12323054-12323073 None:intergenic 20.0%
!!! TGATTATTTTTTACAATCTG+TGG - chr5_1:12323577-12323596 Msa0718150:intron 20.0%
!!! GATTATTTTTTACAATCTGT+GGG - chr5_1:12323578-12323597 Msa0718150:intron 20.0%
!!! GATAATCTTTGAATTTTATC+AGG + chr5_1:12323824-12323843 None:intergenic 20.0%
!!! CATTATTTTTTAACCGATTT+TGG + chr5_1:12324147-12324166 None:intergenic 20.0%
!! AAAAAATAATGTTACATCGA+AGG - chr5_1:12324156-12324175 Msa0718150:CDS 20.0%
!! TTGCACTATAATAATGTTAA+TGG - chr5_1:12324307-12324326 Msa0718150:intron 20.0%
!! ATTAAATAAAGAAATCGCAA+AGG - chr5_1:12324354-12324373 Msa0718150:intron 20.0%
!! TTAAATAAAGAAATCGCAAA+GGG - chr5_1:12324355-12324374 Msa0718150:intron 20.0%
!!! AGCTTTTGATATTTTTAAGA+AGG - chr5_1:12324645-12324664 Msa0718150:CDS 20.0%
!! TTTCTAATGTCAAAACATTA+AGG + chr5_1:12324987-12325006 None:intergenic 20.0%
!!! GACAATTTTTATGAATAACA+AGG - chr5_1:12325108-12325127 Msa0718150:intron 20.0%
!!! ATTTTTATGAATAACAAGGA+TGG - chr5_1:12325112-12325131 Msa0718150:intron 20.0%
!!! TTTTTATGAATAACAAGGAT+GGG - chr5_1:12325113-12325132 Msa0718150:intron 20.0%
!! ATGATTGACTAGAATAATTT+AGG - chr5_1:12325197-12325216 Msa0718150:intron 20.0%
!!! TTAAATATAGGTGTTGTAAA+TGG + chr5_1:12325378-12325397 None:intergenic 20.0%
!! AAATAGGTGTAATTTAAACA+CGG + chr5_1:12325463-12325482 None:intergenic 20.0%
!!! TTGATTAACAAAACATTTTG+GGG + chr5_1:12325597-12325616 None:intergenic 20.0%
!!! CTTGATTAACAAAACATTTT+GGG + chr5_1:12325598-12325617 None:intergenic 20.0%
!! AAAATGCAAACTATTAATGA+AGG + chr5_1:12326361-12326380 None:intergenic 20.0%
!! TCACATCATTTAAAAATGTT+GGG + chr5_1:12326628-12326647 None:intergenic 20.0%
!! ATCACATCATTTAAAAATGT+TGG + chr5_1:12326629-12326648 None:intergenic 20.0%
!! TAAATAAATATGACAGAGAA+TGG - chr5_1:12326661-12326680 Msa0718150:CDS 20.0%
!!! GAAAAATTTTAAATGCTTAC+TGG + chr5_1:12326827-12326846 None:intergenic 20.0%
!!! ACTTTTGCATATATTAAAAC+CGG + chr5_1:12326944-12326963 None:intergenic 20.0%
!!! CTTTTGCTTATATTTAAAAC+CGG - chr5_1:12327005-12327024 Msa0718150:intron 20.0%
!! TGCTTAAACTATTAACAAAT+GGG - chr5_1:12327167-12327186 Msa0718150:intron 20.0%
!!! AAACAAGCTAAATCATTTTA+GGG - chr5_1:12327564-12327583 Msa0718150:intron 20.0%
!! TTATGAATGTAAAGATAATC+TGG + chr5_1:12328137-12328156 None:intergenic 20.0%
!!! ATTACATAACTTTGGTAATT+TGG + chr5_1:12328357-12328376 None:intergenic 20.0%
!!! TCATGTTGTTATGTTTTGTT+TGG + chr5_1:12322018-12322037 None:intergenic 25.0%
!! TTTTTACCTTAATGTGTGTT+TGG - chr5_1:12322469-12322488 Msa0718150:intron 25.0%
! AAACAGATTTAGACATGTTT+GGG + chr5_1:12322686-12322705 None:intergenic 25.0%
! AAAACAGATTTAGACATGTT+TGG + chr5_1:12322687-12322706 None:intergenic 25.0%
! ACAAAATAAAATCAAACCGT+CGG - chr5_1:12322883-12322902 Msa0718150:CDS 25.0%
!! TTAAGGTTAATAAGTTGGAT+TGG + chr5_1:12323037-12323056 None:intergenic 25.0%
! GTAACTTAAGGTTAATAAGT+TGG + chr5_1:12323042-12323061 None:intergenic 25.0%
! ACACATCAAATTCATAATCA+TGG - chr5_1:12323118-12323137 Msa0718150:intron 25.0%
!! TTACTATCATAGGTGATTTT+CGG + chr5_1:12323992-12324011 None:intergenic 25.0%
! AAAATCACCTATGATAGTAA+TGG - chr5_1:12323992-12324011 Msa0718150:intron 25.0%
! TGAATTGTCAATGTCATTAT+TGG - chr5_1:12324087-12324106 Msa0718150:CDS 25.0%
!! ATTATTGGTTGTATTATCTG+TGG - chr5_1:12324102-12324121 Msa0718150:CDS 25.0%
!! TTTTGATGTTGTACCAAAAT+CGG - chr5_1:12324131-12324150 Msa0718150:CDS 25.0%
! AAAAAACAACATCATTGTTG+AGG - chr5_1:12324243-12324262 Msa0718150:intron 25.0%
! GGAGAATATACAAATTCATA+AGG - chr5_1:12324264-12324283 Msa0718150:intron 25.0%
! ACATAACATTTATTCTGTCT+TGG + chr5_1:12324852-12324871 None:intergenic 25.0%
! GACATTAGAAATTAAAGCAA+AGG - chr5_1:12324996-12325015 Msa0718150:intron 25.0%
! CCTATATTTAAGCTAAGTAT+CGG - chr5_1:12325387-12325406 Msa0718150:intron 25.0%
!! CCTTGATTAACAAAACATTT+TGG + chr5_1:12325599-12325618 None:intergenic 25.0%
!!! CCAAAATGTTTTGTTAATCA+AGG - chr5_1:12325596-12325615 Msa0718150:CDS 25.0%
!!! ATGTTTTGTTAATCAAGGAA+AGG - chr5_1:12325601-12325620 Msa0718150:CDS 25.0%
! TTAGCAATGTTATTAAACTC+AGG - chr5_1:12325749-12325768 Msa0718150:CDS 25.0%
! TACATGTTTGAATTAGCATA+TGG + chr5_1:12325945-12325964 None:intergenic 25.0%
! TTAAACATTATTGTATGAGC+AGG + chr5_1:12326021-12326040 None:intergenic 25.0%
! ATGTTTAATGACTTATTTGC+AGG - chr5_1:12326033-12326052 Msa0718150:CDS 25.0%
!! TTTTTATTCTTTCAGAAACC+TGG - chr5_1:12326562-12326581 Msa0718150:CDS 25.0%
!!! ATATTCATTTTGGTGCTTTT+GGG - chr5_1:12326868-12326887 Msa0718150:CDS 25.0%
! TGCAAAAGTCAAAATGTATT+CGG - chr5_1:12326955-12326974 Msa0718150:CDS 25.0%
! CTGCTTAAACTATTAACAAA+TGG - chr5_1:12327166-12327185 Msa0718150:intron 25.0%
! GTATTATAGCTCTTACTAAT+TGG - chr5_1:12327192-12327211 Msa0718150:intron 25.0%
! AACACAAATCTATATACTTC+CGG + chr5_1:12327223-12327242 None:intergenic 25.0%
!! GAAACAAGCTAAATCATTTT+AGG - chr5_1:12327563-12327582 Msa0718150:intron 25.0%
!!! TTCTGTTTTCCTTTTTTATC+TGG - chr5_1:12327636-12327655 Msa0718150:intron 25.0%
! ACTTATAATTTCTTTCTTGC+TGG - chr5_1:12327890-12327909 Msa0718150:intron 25.0%
! CAACTGATATTACATAACTT+TGG + chr5_1:12328365-12328384 None:intergenic 25.0%
!!! ATTCATGGGTTTTGGTTTTT+CGG + chr5_1:12321973-12321992 None:intergenic 30.0%
! AAGACATAATTCATGGGTTT+TGG + chr5_1:12321981-12322000 None:intergenic 30.0%
GGAATCAAGACATAATTCAT+GGG + chr5_1:12321987-12322006 None:intergenic 30.0%
TGGAATCAAGACATAATTCA+TGG + chr5_1:12321988-12322007 None:intergenic 30.0%
!!! ATGTTTTGTTTGGTGGAAAA+TGG + chr5_1:12322008-12322027 None:intergenic 30.0%
!!! TGTTGTTATGTTTTGTTTGG+TGG + chr5_1:12322015-12322034 None:intergenic 30.0%
GAAGAAGATGAAGATTGAAA+CGG + chr5_1:12322047-12322066 None:intergenic 30.0%
TCCAATGAATTCGAAACTAA+CGG + chr5_1:12322193-12322212 None:intergenic 30.0%
!! GTAATTTGGTCTTTTTCATC+TGG - chr5_1:12322286-12322305 Msa0718150:CDS 30.0%
! TAATACCGTTTTACCAAAGT+GGG + chr5_1:12322401-12322420 None:intergenic 30.0%
! ATAATACCGTTTTACCAAAG+TGG + chr5_1:12322402-12322421 None:intergenic 30.0%
TAGCTACTAATTGTAGTTTC+AGG - chr5_1:12322629-12322648 Msa0718150:intron 30.0%
CAAAATAAAATCAAACCGTC+GGG - chr5_1:12322884-12322903 Msa0718150:CDS 30.0%
AAAATAAAATCAAACCGTCG+GGG - chr5_1:12322885-12322904 Msa0718150:CDS 30.0%
! AGTATTTACTCCTTTTGTCT+CGG + chr5_1:12322982-12323001 None:intergenic 30.0%
AGACATCAAAATTATCTTGG+AGG + chr5_1:12323206-12323225 None:intergenic 30.0%
GACAGACATCAAAATTATCT+TGG + chr5_1:12323209-12323228 None:intergenic 30.0%
!! GTTGACTTTTCTTCAATGTA+TGG - chr5_1:12323231-12323250 Msa0718150:intron 30.0%
AATAATCAGTCCTAACTATC+TGG + chr5_1:12323565-12323584 None:intergenic 30.0%
! AGGTAGGATTTTCATTATGT+TGG + chr5_1:12323667-12323686 None:intergenic 30.0%
CAAACAGAAAATTCTTTCGT+TGG + chr5_1:12323799-12323818 None:intergenic 30.0%
! ATTTTCGGCTGCATATAATT+TGG + chr5_1:12323977-12323996 None:intergenic 30.0%
TGCATTACCATTACTATCAT+AGG + chr5_1:12324002-12324021 None:intergenic 30.0%
!!! CGTACTCTCTTTTTTTTAGA+AGG + chr5_1:12324214-12324233 None:intergenic 30.0%
! ATAATAATGTTAATGGACGC+AGG - chr5_1:12324314-12324333 Msa0718150:intron 30.0%
TTCATCCAAATATTGTTCGA+TGG - chr5_1:12324500-12324519 Msa0718150:intron 30.0%
TTCAGATTTGTCAGAAAACT+CGG - chr5_1:12324606-12324625 Msa0718150:CDS 30.0%
!!! AGAAAACTCGGTTTTAAGTA+AGG - chr5_1:12324618-12324637 Msa0718150:CDS 30.0%
AACTTTAGTAAAAGTGGAGA+TGG + chr5_1:12324727-12324746 None:intergenic 30.0%
CTCATCAACTTTAGTAAAAG+TGG + chr5_1:12324733-12324752 None:intergenic 30.0%
!!! CACTTTTACTAAAGTTGATG+AGG - chr5_1:12324731-12324750 Msa0718150:CDS 30.0%
ATGTACACTGTACTTTGTTA+AGG - chr5_1:12325051-12325070 Msa0718150:intron 30.0%
!! CTTTGTTAAGGTTGATGTTT+AGG - chr5_1:12325063-12325082 Msa0718150:intron 30.0%
TTGAATCCGATTGAATTGTT+AGG - chr5_1:12325323-12325342 Msa0718150:intron 30.0%
ATTCCTCCTAACAATTCAAT+CGG + chr5_1:12325332-12325351 None:intergenic 30.0%
GTTGTAAATGGAAACAAAAC+AGG + chr5_1:12325366-12325385 None:intergenic 30.0%
CCGATACTTAGCTTAAATAT+AGG + chr5_1:12325390-12325409 None:intergenic 30.0%
!! ATATTTAAGCTAAGTATCGG+AGG - chr5_1:12325390-12325409 Msa0718150:intron 30.0%
TAATTTAAACACGGAGTTAG+TGG + chr5_1:12325454-12325473 None:intergenic 30.0%
TTATTCCTAGTTCATGCAAA+TGG + chr5_1:12325557-12325576 None:intergenic 30.0%
ATGAACTAGGAATAATACAC+CGG - chr5_1:12325562-12325581 Msa0718150:CDS 30.0%
GAATTAGCATATGGAATGTA+TGG + chr5_1:12325936-12325955 None:intergenic 30.0%
AGTTATGTAGATTAACACGT+AGG + chr5_1:12325987-12326006 None:intergenic 30.0%
! GCTGTAGATTTGTTTAGTTT+AGG - chr5_1:12326114-12326133 Msa0718150:CDS 30.0%
AGAATGACATACCTTAGATT+GGG + chr5_1:12326294-12326313 None:intergenic 30.0%
ACATATGAATCCATCGTTTA+TGG + chr5_1:12326414-12326433 None:intergenic 30.0%
ATTGAGATGTTATTCACAGA+AGG + chr5_1:12326465-12326484 None:intergenic 30.0%
!! TTTGAACTTTGAAACACTAG+AGG + chr5_1:12326498-12326517 None:intergenic 30.0%
GTTTCAAAGTTCAAATCAAC+TGG - chr5_1:12326503-12326522 Msa0718150:CDS 30.0%
TAAATATGACAGAGAATGGT+TGG - chr5_1:12326665-12326684 Msa0718150:CDS 30.0%
AAATATGACAGAGAATGGTT+GGG - chr5_1:12326666-12326685 Msa0718150:CDS 30.0%
TGAGTTCCTATATATCTAAC+AGG + chr5_1:12326693-12326712 None:intergenic 30.0%
! TTTTCAGTAACTCTGATTGA+AGG + chr5_1:12326762-12326781 None:intergenic 30.0%
!!! GATATTCATTTTGGTGCTTT+TGG - chr5_1:12326867-12326886 Msa0718150:CDS 30.0%
! TTGCTTATATTTAAAACCGG+AGG - chr5_1:12327008-12327027 Msa0718150:intron 30.0%
! TGCTTATATTTAAAACCGGA+GGG - chr5_1:12327009-12327028 Msa0718150:intron 30.0%
GCAAAATAAGTTATATTCCC+AGG - chr5_1:12327085-12327104 Msa0718150:intron 30.0%
AAGTTATATTCCCAGGAAAT+TGG - chr5_1:12327092-12327111 Msa0718150:intron 30.0%
TTATAGCTCTTACTAATTGG+AGG - chr5_1:12327195-12327214 Msa0718150:intron 30.0%
! TATTGCATCATCCTCTATTT+TGG - chr5_1:12327320-12327339 Msa0718150:intron 30.0%
! GTCTAAATAAGTTGAAATCC+AGG - chr5_1:12327674-12327693 Msa0718150:intron 30.0%
TAAAATCACTACTCAAGTGT+CGG + chr5_1:12327712-12327731 None:intergenic 30.0%
!! ATTAGCCTTGATCATATAGA+TGG - chr5_1:12328068-12328087 Msa0718150:CDS 30.0%
! TGGCTTGATAGTTTATCAAA+TGG - chr5_1:12328088-12328107 Msa0718150:CDS 30.0%
GTTTATCAAATGGCAAAGAA+CGG - chr5_1:12328098-12328117 Msa0718150:CDS 30.0%
TTAGAATAATCAGTGGCAAA+TGG + chr5_1:12328173-12328192 None:intergenic 30.0%
ATTCTAACCCAAAGTTATGA+TGG - chr5_1:12328186-12328205 Msa0718150:CDS 30.0%
TCTAAACACTGGATTAAACA+TGG + chr5_1:12328216-12328235 None:intergenic 30.0%
ATGTTTAATCCAGTGTTTAG+AGG - chr5_1:12328215-12328234 Msa0718150:CDS 30.0%
AATATCAGTTGCTATGTTAG+AGG - chr5_1:12328374-12328393 Msa0718150:five_prime_UTR 30.0%
ATTGGACAGAAAACCTGTTA+CGG - chr5_1:12322207-12322226 Msa0718150:three_prime_UTR 35.0%
!! TATCTTGTTGAAAGTGCTTC+TGG - chr5_1:12322259-12322278 Msa0718150:CDS 35.0%
!! ATCTTGTTGAAAGTGCTTCT+GGG - chr5_1:12322260-12322279 Msa0718150:CDS 35.0%
CATTCAATAAGACCAGAAGA+CGG + chr5_1:12322346-12322365 None:intergenic 35.0%
!! TCTTCTGGTCTTATTGAATG+TGG - chr5_1:12322346-12322365 Msa0718150:CDS 35.0%
! TTATTGAATGTGGTGATGAC+TGG - chr5_1:12322356-12322375 Msa0718150:CDS 35.0%
! TATTGAATGTGGTGATGACT+GGG - chr5_1:12322357-12322376 Msa0718150:CDS 35.0%
! AATACCGTTTTACCAAAGTG+GGG + chr5_1:12322400-12322419 None:intergenic 35.0%
!! TTAATGTGTGTTTGGTTCTG+CGG - chr5_1:12322477-12322496 Msa0718150:intron 35.0%
!! AAATTGAGTTGGATGTGAAG+TGG - chr5_1:12322550-12322569 Msa0718150:intron 35.0%
TATCATATAGCTAGCCACTA+TGG - chr5_1:12322745-12322764 Msa0718150:CDS 35.0%
AAATAAAATCAAACCGTCGG+GGG - chr5_1:12322886-12322905 Msa0718150:CDS 35.0%
! AACTGAACTAGTTTGAGCTA+AGG - chr5_1:12322926-12322945 Msa0718150:CDS 35.0%
! ACTGAACTAGTTTGAGCTAA+GGG - chr5_1:12322927-12322946 Msa0718150:CDS 35.0%
TAGTTTGAGCTAAGGGTTAA+AGG - chr5_1:12322934-12322953 Msa0718150:CDS 35.0%
TGCAATTGGTGAGTTACAAA+GGG + chr5_1:12323161-12323180 None:intergenic 35.0%
TTGCAATTGGTGAGTTACAA+AGG + chr5_1:12323162-12323181 None:intergenic 35.0%
TTGTAACTCACCAATTGCAA+TGG - chr5_1:12323162-12323181 Msa0718150:intron 35.0%
AACAGCAACATAATCAGCAA+CGG + chr5_1:12323303-12323322 None:intergenic 35.0%
AAAGATGGAGCTGTTATACT+TGG - chr5_1:12323338-12323357 Msa0718150:intron 35.0%
CTGTTATACTTGGATCCAAA+AGG - chr5_1:12323348-12323367 Msa0718150:intron 35.0%
! TTCAAATACAGTGCTCCTTT+TGG + chr5_1:12323366-12323385 None:intergenic 35.0%
! TTTGAAGTGGATGCTAAAAC+AGG - chr5_1:12323380-12323399 Msa0718150:intron 35.0%
! ATGTTTCTACTACTGCAATG+TGG - chr5_1:12323441-12323460 Msa0718150:intron 35.0%
CAAGCTCCTTATTATTTGCA+CGG + chr5_1:12323505-12323524 None:intergenic 35.0%
TCTGGTAAATTAAGCTTTGC+TGG + chr5_1:12323533-12323552 None:intergenic 35.0%
! AGTTTTTGCTCCAGATAGTT+AGG - chr5_1:12323552-12323571 Msa0718150:intron 35.0%
TATGTCAGTAGCTGAATTTG+AGG - chr5_1:12323628-12323647 Msa0718150:intron 35.0%
TATGCTTATGATGTTGACAG+TGG - chr5_1:12323716-12323735 Msa0718150:intron 35.0%
GTTGATGCTTATCAAGAGAA+AGG - chr5_1:12323848-12323867 Msa0718150:intron 35.0%
!! TGGAAGCATCAGCTTTAAAT+CGG + chr5_1:12323888-12323907 None:intergenic 35.0%
! TCAAATCTGAGTCACTGATT+TGG + chr5_1:12324183-12324202 None:intergenic 35.0%
! AAAAAGAGAGTACGTAAGTC+AGG - chr5_1:12324220-12324239 Msa0718150:CDS 35.0%
TCATAAGGAAGCAGAAAATG+AGG - chr5_1:12324279-12324298 Msa0718150:intron 35.0%
ATATATCCCTTCAAGGACAA+TGG + chr5_1:12324392-12324411 None:intergenic 35.0%
TTGAAGGGATATATGAAGGT+CGG - chr5_1:12324398-12324417 Msa0718150:intron 35.0%
CCATACCATCGAACAATATT+TGG + chr5_1:12324508-12324527 None:intergenic 35.0%
CCAAATATTGTTCGATGGTA+TGG - chr5_1:12324505-12324524 Msa0718150:intron 35.0%
!! TTTTAAGAAGGCCCAAATAG+AGG - chr5_1:12324657-12324676 Msa0718150:CDS 35.0%
AGGATGATATGCAATGTCTT+TGG - chr5_1:12324686-12324705 Msa0718150:CDS 35.0%
! CAATGTCTTTGGAAATCGAA+TGG - chr5_1:12324697-12324716 Msa0718150:CDS 35.0%
ACTAGTGAGATACATCATGT+AGG - chr5_1:12324894-12324913 Msa0718150:intron 35.0%
TTTAGGCATTACCTTAGAGT+TGG - chr5_1:12325214-12325233 Msa0718150:intron 35.0%
ATACACGGACAACATAATTG+AGG - chr5_1:12325259-12325278 Msa0718150:intron 35.0%
GTTAGCAAAAGATCGAAGAA+TGG - chr5_1:12325294-12325313 Msa0718150:intron 35.0%
AATCCGATTGAATTGTTAGG+AGG - chr5_1:12325326-12325345 Msa0718150:intron 35.0%
TTGTTAGGAGGAATACACAA+AGG - chr5_1:12325338-12325357 Msa0718150:intron 35.0%
TGTTAGGAGGAATACACAAA+GGG - chr5_1:12325339-12325358 Msa0718150:intron 35.0%
!!! TGTTATTTTTGTCCGCTAAC+AGG - chr5_1:12325511-12325530 Msa0718150:intron 35.0%
!!! GTTATTTTTGTCCGCTAACA+GGG - chr5_1:12325512-12325531 Msa0718150:intron 35.0%
TGAACTAGGAATAATACACC+GGG - chr5_1:12325563-12325582 Msa0718150:CDS 35.0%
ATGTGCCAAACTTTCTGATA+TGG - chr5_1:12325629-12325648 Msa0718150:CDS 35.0%
TGTGCCAAACTTTCTGATAT+GGG - chr5_1:12325630-12325649 Msa0718150:CDS 35.0%
AATCCCCATATCAGAAAGTT+TGG + chr5_1:12325637-12325656 None:intergenic 35.0%
CTTGAAGACATGTCTTCTTT+AGG - chr5_1:12325669-12325688 Msa0718150:CDS 35.0%
!! TAGTCGTTGACTTAGTTACT+TGG - chr5_1:12325774-12325793 Msa0718150:CDS 35.0%
!! GACTTAGTTACTTGGTTTGT+CGG - chr5_1:12325782-12325801 Msa0718150:CDS 35.0%
TAGCATATGGAATGTATGGT+TGG + chr5_1:12325932-12325951 None:intergenic 35.0%
GAATGACATACCTTAGATTG+GGG + chr5_1:12326293-12326312 None:intergenic 35.0%
GAGAATGACATACCTTAGAT+TGG + chr5_1:12326295-12326314 None:intergenic 35.0%
! TCTCGTTCAATGTGTTTTCT+AGG - chr5_1:12326311-12326330 Msa0718150:CDS 35.0%
TAGCATAAAGCCATAAACGA+TGG - chr5_1:12326401-12326420 Msa0718150:CDS 35.0%
TTGGGACCTGTTAGATATAT+AGG - chr5_1:12326684-12326703 Msa0718150:CDS 35.0%
AGGCTTGTAGCATTTAATCA+AGG + chr5_1:12326785-12326804 None:intergenic 35.0%
TCAAGATAAGTATTCATGCG+AGG - chr5_1:12326845-12326864 Msa0718150:CDS 35.0%
! TCATGCGAGGATATTCATTT+TGG - chr5_1:12326858-12326877 Msa0718150:CDS 35.0%
!!! ACCTTTTTAGGATTCATCCA+TGG + chr5_1:12326894-12326913 None:intergenic 35.0%
ATGGATGAATCCTAAAAAGG+TGG - chr5_1:12326893-12326912 Msa0718150:CDS 35.0%
ATGAATCCTAAAAAGGTGGA+AGG - chr5_1:12326897-12326916 Msa0718150:CDS 35.0%
ATTGCAAGATAGTACTACTC+CGG - chr5_1:12326922-12326941 Msa0718150:CDS 35.0%
TCATTTGTCTATCACATGCA+TGG - chr5_1:12327038-12327057 Msa0718150:intron 35.0%
AATCCATTTGCCAATTTCCT+GGG + chr5_1:12327105-12327124 None:intergenic 35.0%
TAATCCATTTGCCAATTTCC+TGG + chr5_1:12327106-12327125 None:intergenic 35.0%
AGATTTGTGTTTGTCTTGTC+TGG - chr5_1:12327232-12327251 Msa0718150:intron 35.0%
TCATTTAATTGTCAGGCCAA+AGG - chr5_1:12327288-12327307 Msa0718150:intron 35.0%
ATCTCAGAACTCCAAAATAG+AGG + chr5_1:12327334-12327353 None:intergenic 35.0%
CAAGAAGAAACCTGAATTTC+TGG + chr5_1:12327598-12327617 None:intergenic 35.0%
! CAGAAATTCAGGTTTCTTCT+TGG - chr5_1:12327596-12327615 Msa0718150:intron 35.0%
!!! TTCCTTTTTTATCTGGTCGA+AGG - chr5_1:12327643-12327662 Msa0718150:intron 35.0%
AACCTTCGACCAGATAAAAA+AGG + chr5_1:12327648-12327667 None:intergenic 35.0%
! TTTTTATCTGGTCGAAGGTT+AGG - chr5_1:12327648-12327667 Msa0718150:intron 35.0%
TTGAAATCCAGGTTTCTTCT+TGG - chr5_1:12327685-12327704 Msa0718150:intron 35.0%
ATCGAATAAGGATCATCTTC+AGG + chr5_1:12327788-12327807 None:intergenic 35.0%
! ATGATCCTTATTCGATTTGC+TGG - chr5_1:12327792-12327811 Msa0718150:intron 35.0%
TATCACCAGCAAATCGAATA+AGG + chr5_1:12327800-12327819 None:intergenic 35.0%
GCATGTCTATGATATGTTCT+TGG + chr5_1:12327867-12327886 None:intergenic 35.0%
!! TTCTTTCTTGCTGGTTTATC+AGG - chr5_1:12327899-12327918 Msa0718150:CDS 35.0%
AAGTAGTCATTGAATCCTTC+CGG + chr5_1:12327942-12327961 None:intergenic 35.0%
TCAAGCCATCTATATGATCA+AGG + chr5_1:12328076-12328095 None:intergenic 35.0%
! CTTTGGGTTAGAATAATCAG+TGG + chr5_1:12328180-12328199 None:intergenic 35.0%
TGGCATTCCATCATAACTTT+GGG + chr5_1:12328196-12328215 None:intergenic 35.0%
ATGGCATTCCATCATAACTT+TGG + chr5_1:12328197-12328216 None:intergenic 35.0%
TAGTTGAATCCTCTAAACAC+TGG + chr5_1:12328227-12328246 None:intergenic 35.0%
! TGTATTCCTCTTGGTGATAA+AGG - chr5_1:12328288-12328307 Msa0718150:CDS 35.0%
AAGAGAGAGTTGTTGGGATT+GGG + chr5_1:12322119-12322138 None:intergenic 40.0%
! GCCGTTAGTTTCGAATTCAT+TGG - chr5_1:12322189-12322208 Msa0718150:three_prime_UTR 40.0%
ATCTTTCATGATCCCCACTT+TGG - chr5_1:12322385-12322404 Msa0718150:intron 40.0%
TGATCCCCACTTTGGTAAAA+CGG - chr5_1:12322393-12322412 Msa0718150:intron 40.0%
GCAGAACCAAACACACATTA+AGG + chr5_1:12322478-12322497 None:intergenic 40.0%
GATGTGAAGTGGTTTATGTC+TGG - chr5_1:12322561-12322580 Msa0718150:intron 40.0%
AATAAAATCAAACCGTCGGG+GGG - chr5_1:12322887-12322906 Msa0718150:CDS 40.0%
!! TTTTGTCTCGGTTTGAACTC+AGG + chr5_1:12322970-12322989 None:intergenic 40.0%
TGAGTTCAAACCGAGACAAA+AGG - chr5_1:12322969-12322988 Msa0718150:CDS 40.0%
GCAATTGGTGAGTTACAAAG+GGG + chr5_1:12323160-12323179 None:intergenic 40.0%
!! AAGGAGCACTGTATTTGAAG+TGG - chr5_1:12323367-12323386 Msa0718150:intron 40.0%
CGACTTCCGTGCAAATAATA+AGG - chr5_1:12323496-12323515 Msa0718150:intron 40.0%
! ACTATCTGGAGCAAAAACTC+TGG + chr5_1:12323551-12323570 None:intergenic 40.0%
! TTTTTACAATCTGTGGGTCC+TGG - chr5_1:12323584-12323603 Msa0718150:intron 40.0%
CATAACACTATTCCTGAACC+AGG + chr5_1:12323605-12323624 None:intergenic 40.0%
CTGGTTCAGGAATAGTGTTA+TGG - chr5_1:12323603-12323622 Msa0718150:intron 40.0%
TTATGATGTTGACAGTGGCT+TGG - chr5_1:12323721-12323740 Msa0718150:intron 40.0%
! ACTTCTCTGAGTTTTCTGTC+AGG + chr5_1:12323770-12323789 None:intergenic 40.0%
!! TCAGCTTTAAATCGGGCATT+GGG + chr5_1:12323880-12323899 None:intergenic 40.0%
!! ATCAGCTTTAAATCGGGCAT+TGG + chr5_1:12323881-12323900 None:intergenic 40.0%
!! GGAAGCATCAGCTTTAAATC+GGG + chr5_1:12323887-12323906 None:intergenic 40.0%
! CTATCACTCTTAGGTTGTGA+TGG + chr5_1:12323908-12323927 None:intergenic 40.0%
GGGAGAAATCTATCACTCTT+AGG + chr5_1:12323917-12323936 None:intergenic 40.0%
AAGAGTGATAGATTTCTCCC+CGG - chr5_1:12323917-12323936 Msa0718150:intron 40.0%
ATCATATTACCACCATGACC+GGG + chr5_1:12323938-12323957 None:intergenic 40.0%
CATCATATTACCACCATGAC+CGG + chr5_1:12323939-12323958 None:intergenic 40.0%
ATATAATTTGGCACAGGCAC+AGG + chr5_1:12323965-12323984 None:intergenic 40.0%
! AATGTTAATGGACGCAGGAT+CGG - chr5_1:12324319-12324338 Msa0718150:intron 40.0%
GAAATCGCAAAGGGAAGTAA+TGG - chr5_1:12324364-12324383 Msa0718150:intron 40.0%
GTCCTTGAAGGGATATATGA+AGG - chr5_1:12324394-12324413 Msa0718150:intron 40.0%
GACCTTCATATATCCCTTCA+AGG + chr5_1:12324399-12324418 None:intergenic 40.0%
! AGTCAGAAGCAATGAGGTTT+TGG + chr5_1:12324480-12324499 None:intergenic 40.0%
GATGAAAGTCAGAAGCAATG+AGG + chr5_1:12324486-12324505 None:intergenic 40.0%
TATTGTTCGATGGTATGGTG+TGG - chr5_1:12324510-12324529 Msa0718150:intron 40.0%
!! CGATTTTGTTTACCTTGCTC+TGG - chr5_1:12324543-12324562 Msa0718150:intron 40.0%
ATCCTTCTGTGCCTCTATTT+GGG + chr5_1:12324671-12324690 None:intergenic 40.0%
TTACAGTCCCATCAATGAAC+AGG - chr5_1:12324925-12324944 Msa0718150:intron 40.0%
TACAGTCCCATCAATGAACA+GGG - chr5_1:12324926-12324945 Msa0718150:intron 40.0%
TTGCTACCCTGTTCATTGAT+GGG + chr5_1:12324935-12324954 None:intergenic 40.0%
AACAAGGATGGGTGATAAAC+AGG - chr5_1:12325124-12325143 Msa0718150:intron 40.0%
ACAAGGATGGGTGATAAACA+GGG - chr5_1:12325125-12325144 Msa0718150:intron 40.0%
ACGAGGATGAGAAAGATACA+CGG - chr5_1:12325244-12325263 Msa0718150:intron 40.0%
CTTGTCCATTTGCATGAACT+AGG - chr5_1:12325549-12325568 Msa0718150:intron 40.0%
!!! CATTTTGGGGTTTCAAATCC+CGG + chr5_1:12325584-12325603 None:intergenic 40.0%
GTGCCAAACTTTCTGATATG+GGG - chr5_1:12325631-12325650 Msa0718150:CDS 40.0%
! TCTTTAGGCCATAGTTCTAC+TGG - chr5_1:12325684-12325703 Msa0718150:CDS 40.0%
TGTACTCACCAGTAGAACTA+TGG + chr5_1:12325695-12325714 None:intergenic 40.0%
!! TTACTTGGTTTGTCGGTCAT+TGG - chr5_1:12325789-12325808 Msa0718150:CDS 40.0%
TCGAACTAATGAGTCTCTAG+TGG - chr5_1:12325812-12325831 Msa0718150:CDS 40.0%
AATGACTTATTTGCAGGCTG+TGG - chr5_1:12326039-12326058 Msa0718150:CDS 40.0%
CTGCTGTCATACAGAAAAAG+AGG + chr5_1:12326146-12326165 None:intergenic 40.0%
! CTCTTTTTCTGTATGACAGC+AGG - chr5_1:12326144-12326163 Msa0718150:CDS 40.0%
GAAATTAGATCCTCTGCTTC+AGG + chr5_1:12326252-12326271 None:intergenic 40.0%
ACAAGTCTCAGACACATATC+CGG + chr5_1:12326594-12326613 None:intergenic 40.0%
GACTTAACACAGCTACTTGT+AGG + chr5_1:12326805-12326824 None:intergenic 40.0%
GCCATGGATGAATCCTAAAA+AGG - chr5_1:12326890-12326909 Msa0718150:CDS 40.0%
! CAATGTCCTTCCACCTTTTT+AGG + chr5_1:12326906-12326925 None:intergenic 40.0%
TATCACATGCATGGAACTGA+TGG - chr5_1:12327047-12327066 Msa0718150:intron 40.0%
ATGGAACTGATGGAAGGATA+GGG - chr5_1:12327057-12327076 Msa0718150:intron 40.0%
ATTCCCAGGAAATTGGCAAA+TGG - chr5_1:12327099-12327118 Msa0718150:intron 40.0%
CTCTTACTAATTGGAGGAAC+CGG - chr5_1:12327201-12327220 Msa0718150:intron 40.0%
TGCAATACTTCAATCGCCTT+TGG + chr5_1:12327307-12327326 None:intergenic 40.0%
!! ACTGGCTTTAGGTGCAAAAT+GGG - chr5_1:12327450-12327469 Msa0718150:intron 40.0%
TGCAAAATGGGACGAAAAGA+TGG - chr5_1:12327462-12327481 Msa0718150:intron 40.0%
! GAAGAAACCTGAATTTCTGG+AGG + chr5_1:12327595-12327614 None:intergenic 40.0%
CTGGTTTATCAGGAACTGAT+AGG - chr5_1:12327909-12327928 Msa0718150:CDS 40.0%
! ACTTTGCAAGTCGATTTCCT+AGG - chr5_1:12327958-12327977 Msa0718150:CDS 40.0%
TACACTTCAATCAAGAGCCT+AGG + chr5_1:12327978-12327997 None:intergenic 40.0%
AGTTATCTGCAACTACTGCA+AGG - chr5_1:12328001-12328020 Msa0718150:CDS 40.0%
TAGTGGGATTGTATTCCTCT+TGG - chr5_1:12328279-12328298 Msa0718150:CDS 40.0%
ACAGTTCCTTTATCACCAAG+AGG + chr5_1:12328297-12328316 None:intergenic 40.0%
ATCAGTTGCTATGTTAGAGG+TGG - chr5_1:12328377-12328396 Msa0718150:five_prime_UTR 40.0%
GAAGAGAGAGTTGTTGGGAT+TGG + chr5_1:12322120-12322139 None:intergenic 45.0%
GTGGAGAAGAGAGAGTTGTT+GGG + chr5_1:12322125-12322144 None:intergenic 45.0%
TGTGGAGAAGAGAGAGTTGT+TGG + chr5_1:12322126-12322145 None:intergenic 45.0%
CAACTCTCTCTTCTCCACAA+CGG - chr5_1:12322127-12322146 Msa0718150:three_prime_UTR 45.0%
!! TTGTTGAAAGTGCTTCTGGG+AGG - chr5_1:12322263-12322282 Msa0718150:CDS 45.0%
!! TGTTGAAAGTGCTTCTGGGA+GGG - chr5_1:12322264-12322283 Msa0718150:CDS 45.0%
TTGGCAGAGGAATGGTAGAT+CGG + chr5_1:12322316-12322335 None:intergenic 45.0%
TCAATAAGACCAGAAGACGG+AGG + chr5_1:12322343-12322362 None:intergenic 45.0%
TGGATCAAATGACGCCATAG+TGG + chr5_1:12322762-12322781 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr5_1:12322794-12322813 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr5_1:12322795-12322814 None:intergenic 45.0%
ATAAAATCAAACCGTCGGGG+GGG - chr5_1:12322888-12322907 Msa0718150:CDS 45.0%
GAGCTAAGGGTTAAAGGAGT+TGG - chr5_1:12322940-12322959 Msa0718150:CDS 45.0%
CTCAACTCAGCCATTGCAAT+TGG + chr5_1:12323175-12323194 None:intergenic 45.0%
TTGAAACCTGCAGAGACTCA+AGG - chr5_1:12323274-12323293 Msa0718150:intron 45.0%
ACGCCTATTGTGTCGAAAGA+TGG - chr5_1:12323323-12323342 Msa0718150:intron 45.0%
GCTCCATCTTTCGACACAAT+AGG + chr5_1:12323329-12323348 None:intergenic 45.0%
GGAAAGCTCCTTAGAAGCTA+TGG - chr5_1:12323401-12323420 Msa0718150:intron 45.0%
TCTACTACTGCAATGTGGAG+TGG - chr5_1:12323446-12323465 Msa0718150:intron 45.0%
TCAAGTGAAGCTGTCAAGGT+AGG + chr5_1:12323683-12323702 None:intergenic 45.0%
TGCATCAAGTGAAGCTGTCA+AGG + chr5_1:12323687-12323706 None:intergenic 45.0%
ACAGCTTCACTTGATGCAGA+AGG - chr5_1:12323689-12323708 Msa0718150:intron 45.0%
TTTCTGTCAGGACACGCATA+CGG + chr5_1:12323758-12323777 None:intergenic 45.0%
TCATATTACCACCATGACCG+GGG + chr5_1:12323937-12323956 None:intergenic 45.0%
GGCTGCATATAATTTGGCAC+AGG + chr5_1:12323971-12323990 None:intergenic 45.0%
! AAGGGAAGTTGATCTGAGCA+GGG - chr5_1:12324060-12324079 Msa0718150:CDS 45.0%
AGGAAGCAGAAAATGAGGCA+CGG - chr5_1:12324284-12324303 Msa0718150:intron 45.0%
AATGGCACCATTGTCCTTGA+AGG - chr5_1:12324382-12324401 Msa0718150:intron 45.0%
ATGGCACCATTGTCCTTGAA+GGG - chr5_1:12324383-12324402 Msa0718150:intron 45.0%
! TGCTGTCAAACGTCTTGTTC+AGG - chr5_1:12324426-12324445 Msa0718150:intron 45.0%
CATCCTTCTGTGCCTCTATT+TGG + chr5_1:12324672-12324691 None:intergenic 45.0%
GTTGCTACCCTGTTCATTGA+TGG + chr5_1:12324936-12324955 None:intergenic 45.0%
TAGGAGCTTTGCTGCAATGA+AGG - chr5_1:12325082-12325101 Msa0718150:intron 45.0%
TCGTGGATTCTCCAACTCTA+AGG + chr5_1:12325228-12325247 None:intergenic 45.0%
TTAGAGTTGGAGAATCCACG+AGG - chr5_1:12325227-12325246 Msa0718150:intron 45.0%
GTGTATCTTTCTCATCCTCG+TGG + chr5_1:12325245-12325264 None:intergenic 45.0%
AGAAACCACATCCCTGTTAG+CGG + chr5_1:12325526-12325545 None:intergenic 45.0%
CTAACAGGGATGTGGTTTCT+GGG - chr5_1:12325526-12325545 Msa0718150:intron 45.0%
ACAAATCTACAGCCCGTGTT+TGG + chr5_1:12326107-12326126 None:intergenic 45.0%
ACAGCAGGAAGACATCCATT+TGG - chr5_1:12326159-12326178 Msa0718150:CDS 45.0%
AGAGTTTCTTCCTGAAGCAG+AGG - chr5_1:12326239-12326258 Msa0718150:CDS 45.0%
TAAACCCTGACCCCAATCTA+AGG - chr5_1:12326280-12326299 Msa0718150:CDS 45.0%
CATACCTTAGATTGGGGTCA+GGG + chr5_1:12326287-12326306 None:intergenic 45.0%
ACATACCTTAGATTGGGGTC+AGG + chr5_1:12326288-12326307 None:intergenic 45.0%
!!! ATTTTGGTGCTTTTGGGCCA+TGG - chr5_1:12326874-12326893 Msa0718150:CDS 45.0%
GACAAATGAACTACTCCCTC+CGG + chr5_1:12327027-12327046 None:intergenic 45.0%
ACATGCATGGAACTGATGGA+AGG - chr5_1:12327051-12327070 Msa0718150:intron 45.0%
CATGGAACTGATGGAAGGAT+AGG - chr5_1:12327056-12327075 Msa0718150:intron 45.0%
AACTGATGGAAGGATAGGGT+GGG - chr5_1:12327061-12327080 Msa0718150:intron 45.0%
GTTTGTCTTGTCTGGTGAGA+AGG - chr5_1:12327240-12327259 Msa0718150:intron 45.0%
! CATTTTGCACCTAAAGCCAG+TGG + chr5_1:12327451-12327470 None:intergenic 45.0%
!! CACTGGCTTTAGGTGCAAAA+TGG - chr5_1:12327449-12327468 Msa0718150:intron 45.0%
CCAATGTTGGCAATGAAAGC+TGG + chr5_1:12327490-12327509 None:intergenic 45.0%
CCAGCTTTCATTGCCAACAT+TGG - chr5_1:12327487-12327506 Msa0718150:intron 45.0%
TTGCCAACATTGGTCGTTAC+AGG - chr5_1:12327497-12327516 Msa0718150:intron 45.0%
TCATGACCCTCAACAAGTCT+CGG + chr5_1:12327543-12327562 None:intergenic 45.0%
GGAATTGCCTCCAGAAATTC+AGG - chr5_1:12327585-12327604 Msa0718150:intron 45.0%
TCATTGAATCCTTCCGGAAC+AGG + chr5_1:12327936-12327955 None:intergenic 45.0%
AATCAGTGGCAAATGGCAAC+TGG + chr5_1:12328166-12328185 None:intergenic 45.0%
!! TTAAAAAAAAAAAAATATCT+AGG + chr5_1:12324807-12324826 None:intergenic 5.0%
GGATACATCTGCAACGATGC+AGG + chr5_1:12322086-12322105 None:intergenic 50.0%
AGTTGTTGGGATTGGGAGGT+GGG + chr5_1:12322112-12322131 None:intergenic 50.0%
AGAGAGTTGTTGGGATTGGG+AGG + chr5_1:12322116-12322135 None:intergenic 50.0%
TTCGAAACTAACGGCGACGA+TGG + chr5_1:12322184-12322203 None:intergenic 50.0%
CAGAAAACCTGTTACGGCAC+TGG - chr5_1:12322213-12322232 Msa0718150:three_prime_UTR 50.0%
! AAAACCTGTTACGGCACTGG+TGG - chr5_1:12322216-12322235 Msa0718150:three_prime_UTR 50.0%
! GTGCTTCTGGGAGGGTAATT+TGG - chr5_1:12322272-12322291 Msa0718150:CDS 50.0%
!! GAGGAGTATTGGCAGAGGAA+TGG + chr5_1:12322324-12322343 None:intergenic 50.0%
! ACCAGAAGACGGAGGAGTAT+TGG + chr5_1:12322335-12322354 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr5_1:12322790-12322809 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr5_1:12322796-12322815 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr5_1:12322793-12322812 Msa0718150:CDS 50.0%
GTGTTCGCTTAGCGTGTGTT+TGG + chr5_1:12323102-12323121 None:intergenic 50.0%
CAGCAGCACCATAGCTTCTA+AGG + chr5_1:12323412-12323431 None:intergenic 50.0%
TGCAATGTGGAGTGGTGACA+AGG - chr5_1:12323454-12323473 Msa0718150:intron 50.0%
AGTGGTGACAAGGACAGTGA+GGG - chr5_1:12323464-12323483 Msa0718150:intron 50.0%
GATAGATTTCTCCCCGGTCA+TGG - chr5_1:12323923-12323942 Msa0718150:intron 50.0%
! CTTGGTGCAGTGATCTCCAT+GGG + chr5_1:12324043-12324062 None:intergenic 50.0%
CATGGAGATCACTGCACCAA+GGG - chr5_1:12324042-12324061 Msa0718150:CDS 50.0%
CTGCTCAGATCAACTTCCCT+TGG + chr5_1:12324061-12324080 None:intergenic 50.0%
! CAAGGGAAGTTGATCTGAGC+AGG - chr5_1:12324059-12324078 Msa0718150:CDS 50.0%
TTTGTCCGCTAACAGGGATG+TGG - chr5_1:12325518-12325537 Msa0718150:intron 50.0%
GCTAACAGGGATGTGGTTTC+TGG - chr5_1:12325525-12325544 Msa0718150:intron 50.0%
ATTTGCAGGCTGTGGCAGTT+CGG - chr5_1:12326047-12326066 Msa0718150:CDS 50.0%
TTCTTCAGGGACGCCAAACA+CGG - chr5_1:12326091-12326110 Msa0718150:CDS 50.0%
TTCAGAAACCTGGCCATCTC+CGG - chr5_1:12326572-12326591 Msa0718150:CDS 50.0%
CTCAGACACATATCCGGAGA+TGG + chr5_1:12326588-12326607 None:intergenic 50.0%
CTGCTTTCTGCAGTGCATTC+AGG + chr5_1:12326717-12326736 None:intergenic 50.0%
GCACTGCAGAAAGCAGTTAC+TGG - chr5_1:12326721-12326740 Msa0718150:CDS 50.0%
GAACTGATGGAAGGATAGGG+TGG - chr5_1:12327060-12327079 Msa0718150:intron 50.0%
!! ATTAGAGAGCACTGCTCCAC+TGG - chr5_1:12327432-12327451 Msa0718150:intron 50.0%
TCGCCTGTAACGACCAATGT+TGG + chr5_1:12327503-12327522 None:intergenic 50.0%
TGTCGGTCCAAGAAGAAACC+TGG + chr5_1:12327695-12327714 None:intergenic 50.0%
GGAACTGATAGGACCTGTTC+CGG - chr5_1:12327920-12327939 Msa0718150:CDS 50.0%
TGGCAAATGGCAACTGGTTG+AGG + chr5_1:12328160-12328179 None:intergenic 50.0%
GTTGTTGGGATTGGGAGGTG+GGG + chr5_1:12322111-12322130 None:intergenic 55.0%
GAGTTGTTGGGATTGGGAGG+TGG + chr5_1:12322113-12322132 None:intergenic 55.0%
GAGAGGGAGAGAAACCGTTG+TGG + chr5_1:12322144-12322163 None:intergenic 55.0%
GAAACTAACGGCGACGATGG+CGG + chr5_1:12322181-12322200 None:intergenic 55.0%
!! GCACTGGTGGCTGGTTTAGA+CGG - chr5_1:12322229-12322248 Msa0718150:exon 55.0%
!! AGACGGAGGAGTATTGGCAG+AGG + chr5_1:12322329-12322348 None:intergenic 55.0%
GCCAATACTCCTCCGTCTTC+TGG - chr5_1:12322331-12322350 Msa0718150:CDS 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr5_1:12322782-12322801 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr5_1:12322781-12322800 Msa0718150:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr5_1:12322782-12322801 Msa0718150:CDS 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr5_1:12322788-12322807 Msa0718150:CDS 55.0%
CGGATTCCTTGAGTCTCTGC+AGG + chr5_1:12323283-12323302 None:intergenic 55.0%
GAGTGGTGACAAGGACAGTG+AGG - chr5_1:12323463-12323482 Msa0718150:intron 55.0%
CAATCTGTGGGTCCTGGTTC+AGG - chr5_1:12323590-12323609 Msa0718150:intron 55.0%
AGATTTCTCCCCGGTCATGG+TGG - chr5_1:12323926-12323945 Msa0718150:intron 55.0%
! CCTTGGTGCAGTGATCTCCA+TGG + chr5_1:12324044-12324063 None:intergenic 55.0%
CCATGGAGATCACTGCACCA+AGG - chr5_1:12324041-12324060 Msa0718150:CDS 55.0%
ATGCACAACGCTCCAGAGCA+AGG + chr5_1:12324558-12324577 None:intergenic 55.0%
!! GGAGCGTTGTGCATGCAACT+TGG - chr5_1:12324564-12324583 Msa0718150:intron 55.0%
! GGCCCAAATAGAGGCACAGA+AGG - chr5_1:12324666-12324685 Msa0718150:CDS 55.0%
TTTGCAGGCTGTGGCAGTTC+GGG - chr5_1:12326048-12326067 Msa0718150:CDS 55.0%
TCTTCAGGGACGCCAAACAC+GGG - chr5_1:12326092-12326111 Msa0718150:CDS 55.0%
CGCTCAAGTCGCTCTCCAAA+TGG + chr5_1:12326177-12326196 None:intergenic 55.0%
TTTGGAGAGCGACTTGAGCG+TGG - chr5_1:12326177-12326196 Msa0718150:CDS 55.0%
ACACATATCCGGAGATGGCC+AGG + chr5_1:12326583-12326602 None:intergenic 55.0%
TCGCGACGTTAGTGACAGAG+TGG - chr5_1:12327369-12327388 Msa0718150:intron 55.0%
!! AGCACTGCTCCACTGGCTTT+AGG - chr5_1:12327439-12327458 Msa0718150:intron 55.0%
!! ACAGCGTCCGAGACTTGTTG+AGG - chr5_1:12327533-12327552 Msa0718150:intron 55.0%
!! CAGCGTCCGAGACTTGTTGA+GGG - chr5_1:12327534-12327553 Msa0718150:intron 55.0%
CTGATAGGACCTGTTCCGGA+AGG - chr5_1:12327924-12327943 Msa0718150:CDS 55.0%
TTGGGATTGGGAGGTGGGGA+TGG + chr5_1:12322107-12322126 None:intergenic 60.0%
AAATCAAACCGTCGGGGGGG+AGG - chr5_1:12322891-12322910 Msa0718150:CDS 60.0%
TATGCTTCCGCAGCCTCCCA+TGG - chr5_1:12324024-12324043 Msa0718150:CDS 60.0%
GTGATCTCCATGGGAGGCTG+CGG + chr5_1:12324034-12324053 None:intergenic 60.0%
GGTGCAGTGATCTCCATGGG+AGG + chr5_1:12324040-12324059 None:intergenic 60.0%
AGCGCCAGAGCAGCTTCTTC+AGG - chr5_1:12326077-12326096 Msa0718150:CDS 60.0%
GCGCCAGAGCAGCTTCTTCA+GGG - chr5_1:12326078-12326097 Msa0718150:CDS 60.0%
CGTCCCTGAAGAAGCTGCTC+TGG + chr5_1:12326084-12326103 None:intergenic 60.0%
GGTGGAAGAGCGGGAGGAGA+GGG + chr5_1:12322160-12322179 None:intergenic 65.0%
! GACGATGGCGGTGGAAGAGC+GGG + chr5_1:12322169-12322188 None:intergenic 65.0%
! CGACGATGGCGGTGGAAGAG+CGG + chr5_1:12322170-12322189 None:intergenic 65.0%
! ACTAACGGCGACGATGGCGG+TGG + chr5_1:12322178-12322197 None:intergenic 65.0%
CCAGCCACCAGTGCCGTAAC+AGG + chr5_1:12322223-12322242 None:intergenic 65.0%
!! CCTGTTACGGCACTGGTGGC+TGG - chr5_1:12322220-12322239 Msa0718150:three_prime_UTR 65.0%
AAACCGTCGGGGGGGAGGTT+GGG - chr5_1:12322896-12322915 Msa0718150:CDS 65.0%
CAGGCTGTGGCAGTTCGGGT+TGG - chr5_1:12326052-12326071 Msa0718150:CDS 65.0%
CGGTGGAAGAGCGGGAGGAG+AGG + chr5_1:12322161-12322180 None:intergenic 70.0%
! GATGGCGGTGGAAGAGCGGG+AGG + chr5_1:12322166-12322185 None:intergenic 70.0%
CAAACCGTCGGGGGGGAGGT+TGG - chr5_1:12322895-12322914 Msa0718150:CDS 70.0%
AACCGTCGGGGGGGAGGTTG+GGG - chr5_1:12322897-12322916 Msa0718150:CDS 70.0%
AGCCCCAACCTCCCCCCCGA+CGG + chr5_1:12322902-12322921 None:intergenic 75.0%
TCGGGGGGGAGGTTGGGGCT+GGG - chr5_1:12322902-12322921 Msa0718150:CDS 75.0%
! GTCGGGGGGGAGGTTGGGGC+TGG - chr5_1:12322901-12322920 Msa0718150:CDS 80.0%
! CGGGGGGGAGGTTGGGGCTG+GGG - chr5_1:12322903-12322922 Msa0718150:CDS 80.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 12321901 12328409 12321901 ID=Msa0718150;Name=Msa0718150
chr5_1 mRNA 12321901 12328409 12321901 ID=Msa0718150-mRNA-1;Parent=Msa0718150;Name=Msa0718150-mRNA-1;_AED=0.06;_eAED=0.06;_QI=46|1|1|1|1|1|6|345|933
chr5_1 exon 12321901 12322389 12321901 ID=Msa0718150-mRNA-1:exon:5044;Parent=Msa0718150-mRNA-1
chr5_1 exon 12322704 12323007 12322704 ID=Msa0718150-mRNA-1:exon:5043;Parent=Msa0718150-mRNA-1
chr5_1 exon 12324009 12324255 12324009 ID=Msa0718150-mRNA-1:exon:5042;Parent=Msa0718150-mRNA-1
chr5_1 exon 12324605 12324777 12324605 ID=Msa0718150-mRNA-1:exon:5041;Parent=Msa0718150-mRNA-1
chr5_1 exon 12325558 12327023 12325558 ID=Msa0718150-mRNA-1:exon:5040;Parent=Msa0718150-mRNA-1
chr5_1 exon 12327896 12328409 12327896 ID=Msa0718150-mRNA-1:exon:5039;Parent=Msa0718150-mRNA-1
chr5_1 five_prime_UTR 12328364 12328409 12328364 ID=Msa0718150-mRNA-1:five_prime_utr;Parent=Msa0718150-mRNA-1
chr5_1 CDS 12327896 12328363 12327896 ID=Msa0718150-mRNA-1:cds;Parent=Msa0718150-mRNA-1
chr5_1 CDS 12325558 12327023 12325558 ID=Msa0718150-mRNA-1:cds;Parent=Msa0718150-mRNA-1
chr5_1 CDS 12324605 12324777 12324605 ID=Msa0718150-mRNA-1:cds;Parent=Msa0718150-mRNA-1
chr5_1 CDS 12324009 12324255 12324009 ID=Msa0718150-mRNA-1:cds;Parent=Msa0718150-mRNA-1
chr5_1 CDS 12322704 12323007 12322704 ID=Msa0718150-mRNA-1:cds;Parent=Msa0718150-mRNA-1
chr5_1 CDS 12322246 12322389 12322246 ID=Msa0718150-mRNA-1:cds;Parent=Msa0718150-mRNA-1
chr5_1 three_prime_UTR 12321901 12322245 12321901 ID=Msa0718150-mRNA-1:three_prime_utr;Parent=Msa0718150-mRNA-1
Gene Sequence

>Msa0718150

ATGAAACACCAAAATCTTAAAAACCGAAAAACCAAAACCCATGAATTATGTCTTGATTCCATTTTCCACCAAACAAAACATAACAACATGAATCATTCCGTTTCAATCTTCATCTTCTTCATCATCTCAATCTTCACCTGCATCGTTGCAGATGTATCCATCCCCACCTCCCAATCCCAACAACTCTCTCTTCTCCACAACGGTTTCTCTCCCTCTCCTCCCGCTCTTCCACCGCCATCGTCGCCGTTAGTTTCGAATTCATTGGACAGAAAACCTGTTACGGCACTGGTGGCTGGTTTAGACGGAACTATTTATCTTGTTGAAAGTGCTTCTGGGAGGGTAATTTGGTCTTTTTCATCTGGTTCACCGATCTACCATTCCTCTGCCAATACTCCTCCGTCTTCTGGTCTTATTGAATGTGGTGATGACTGGGAATTAATCTTTCATGATCCCCACTTTGGTAAAACGAGACTCAAGGAATCCGTTGCTGATTATGTTGCTGTTACGCCTATTGTGTCGAAAGATGGAGCTGTTATACTTGGATCCAAAAGGAGCACTGTATTTGAAGTGGATGCTAAAACAGGAAAGCTCCTTAGAAGCTATGGTGCTGCTGATTTTCATAATGTTTCTACTACTGCAATGTGGAGTGGTGACAAGGACAGTGAGGGTGTTACTAACGACTTCCGTGCAAATAATAAGGAGCTTGCTGATCCAGCAAAGCTTAATTTACCAGAGTTTTTGCTCCAGATAGTTAGGACTGATTATTTTTTACAATCTGTGGGTCCTGGTTCAGGAATAGTGTTATGGACTATGTCAGTAGCTGAATTTGAGGCTGTATTATTTTGCCAACATAATGAAAATCCTACCTTGACAGCTTCACTTGATGCAGAAGGTGAGTATGCTTATGATGTTGACAGTGGCTTGGATTTTGCTATGCCGTATGCGTGTCCTGACAGAAAACTCAGAGAAGTCTATCGCCAACGAAAGAATTTTCTGTTTGAACCTGATAAAATTCAAAGATTATCTGATGTTGATGCTTATCAAGAGAAAGGTATGCTCCCAATGCCCGATTTAAAGCTGATGCTTCCATCACAACCTAAGAGTGATAGATTTCTCCCCGGTCATGGTGGTAATATGATGCTACCTGTGCCTGTGCCAAATTATATGCAGCCGAAAATCACCTATGATAGTAATGGTAATGCAGTTATGCTTCCGCAGCCTCCCATGGAGATCACTGCACCAAGGGAAGTTGATCTGAGCAGGGTGATTGAATTGTCAATGTCATTATTGGTTGTATTATCTGTGGTCTTTCTTTTGATGTTGTACCAAAATCGGTTAAAAAATAATGTTACATCGAAGGTCCAAATCAGTGACTCAGATTTGAAAAGTTCGCCTTCTAAAAAAAAGAGAGTACGTAAGTCAGGAAAAAACAACATCATTGTTGAGGAGAATATACAAATTCATAAGGAAGCAGAAAATGAGGCACGGTTGCACTATAATAATGTTAATGGACGCAGGATCGGTAAACTGTGTGTATTAAATAAAGAAATCGCAAAGGGAAGTAATGGCACCATTGTCCTTGAAGGGATATATGAAGGTCGGACAGTTGCTGTCAAACGTCTTGTTCAGGCTCATCATGATGTAGCTCATAAAGAAATCCAAAACCTCATTGCTTCTGACTTTCATCCAAATATTGTTCGATGGTATGGTGTGGAATATGATCACGATTTTGTTTACCTTGCTCTGGAGCGTTGTGCATGCAACTTGGATGATCTGATTACTTTTTATTCAGATTTGTCAGAAAACTCGGTTTTAAGTAAGGATCAAGCTTTTGATATTTTTAAGAAGGCCCAAATAGAGGCACAGAAGGATGATATGCAATGTCTTTGGAAATCGAATGGTTATCCATCTCCACTTTTACTAAAGTTGATGAGGGATGTGGTTTCTGGGCTTGTCCATTTGCATGAACTAGGAATAATACACCGGGATTTGAAACCCCAAAATGTTTTGTTAATCAAGGAAAGGTCATTATGTGCCAAACTTTCTGATATGGGGATTAGTAAACGACTTCTTGAAGACATGTCTTCTTTAGGCCATAGTTCTACTGGCTGTGGCAGTTCGGGTTGGCAAGCGCCAGAGCAGCTTCTTCAGGGACGCCAAACACGGGCTGTAGATTTGTTTAGTTTAGGTTGTGTCCTCTTTTTCTGTATGACAGCAGGAAGACATCCATTTGGAGAGCGACTTGAGCGTGGTGTCAACATTGTTAAAAATAAAAAAGATCTTTTCTTAGTAGAGTTTCTTCCTGAAGCAGAGGATCTAATTTCTTGTTTATTAAACCCTGACCCCAATCTAAGGCCAAAGGCGATTGAAGTATTGCATCATCCTCTATTTTGGAGTTCTGAGATGAGACTTTCATTTCTTCGCGACGTTAGTGACAGAGTGGAACTTGAAGATAGAGAGACTAATTCTGTTCTTTTGAATGTATTAGAGAGCACTGCTCCACTGGCTTTAGGTGCAAAATGGGACGAAAAGATGGAACCAGCTTTCATTGCCAACATTGGTCGTTACAGGCGATATAAATTTGACAGCGTCCGAGACTTGTTGAGGGTCATGAGAAACAAGCTAAATCATTTTAGGGAATTGCCTCCAGAAATTCAGGAACTGATAGGACCTGTTCCGGAAGGATTCAATGACTACTTTGCAAGTCGATTTCCTAGGCTCTTGATTGAAGTGTACAAAGTTATCTGCAACTACTGCAAGGATGATGAATGTTTTCAAAGATATTTTAGAGACATTGATTAA
Protein sequence

>Msa0718150

MKHQNLKNRKTKTHELCLDSIFHQTKHNNMNHSVSIFIFFIISIFTCIVADVSIPTSQSQQLSLLHNGFSPSPPALPPPSSPLVSNSLDRKPVTALVAGLDGTIYLVESASGRVIWSFSSGSPIYHSSANTPPSSGLIECGDDWELIFHDPHFGKTRLKESVADYVAVTPIVSKDGAVILGSKRSTVFEVDAKTGKLLRSYGAADFHNVSTTAMWSGDKDSEGVTNDFRANNKELADPAKLNLPEFLLQIVRTDYFLQSVGPGSGIVLWTMSVAEFEAVLFCQHNENPTLTASLDAEGEYAYDVDSGLDFAMPYACPDRKLREVYRQRKNFLFEPDKIQRLSDVDAYQEKGMLPMPDLKLMLPSQPKSDRFLPGHGGNMMLPVPVPNYMQPKITYDSNGNAVMLPQPPMEITAPREVDLSRVIELSMSLLVVLSVVFLLMLYQNRLKNNVTSKVQISDSDLKSSPSKKKRVRKSGKNNIIVEENIQIHKEAENEARLHYNNVNGRRIGKLCVLNKEIAKGSNGTIVLEGIYEGRTVAVKRLVQAHHDVAHKEIQNLIASDFHPNIVRWYGVEYDHDFVYLALERCACNLDDLITFYSDLSENSVLSKDQAFDIFKKAQIEAQKDDMQCLWKSNGYPSPLLLKLMRDVVSGLVHLHELGIIHRDLKPQNVLLIKERSLCAKLSDMGISKRLLEDMSSLGHSSTGCGSSGWQAPEQLLQGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERGVNIVKNKKDLFLVEFLPEAEDLISCLLNPDPNLRPKAIEVLHHPLFWSSEMRLSFLRDVSDRVELEDRETNSVLLNVLESTAPLALGAKWDEKMEPAFIANIGRYRRYKFDSVRDLLRVMRNKLNHFRELPPEIQELIGPVPEGFNDYFASRFPRLLIEVYKVICNYCKDDECFQRYFRDID*