AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0718420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0718420 MtrunA17_Chr5g0407561 94.549 477 26 0 1 477 1 477 0.0 929
Msa0718420 MtrunA17_Chr3g0144341 51.899 237 88 2 247 478 32 247 3.73e-67 220
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0718420 AT2G17410.1 69.634 191 56 1 294 484 480 668 2.68e-85 280
Msa0718420 AT2G17410.3 69.634 191 56 1 294 484 480 668 2.68e-85 280
Msa0718420 AT2G17410.2 69.634 191 56 1 294 484 480 668 3.01e-85 279
Msa0718420 AT1G76510.2 57.865 178 69 2 305 477 137 313 4.38e-59 201
Msa0718420 AT1G76510.4 57.865 178 69 2 305 477 137 313 4.38e-59 201
Msa0718420 AT1G76510.1 57.865 178 69 2 305 477 137 313 4.38e-59 201
Msa0718420 AT1G20910.1 56.742 178 71 2 305 477 101 277 1.89e-57 196
Msa0718420 AT1G20910.2 56.742 178 71 2 305 477 101 277 2.45e-57 196
Msa0718420 AT1G76510.3 51.244 201 69 3 305 477 137 336 2.71e-53 187

Find 203 sgRNAs with CRISPR-Local

Find 599 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATCAGCGTATCCAATTT+AGG 0.103967 5_1:-12670427 Msa0718420:five_prime_UTR
AAGCCATTCTCCATAAAATT+TGG 0.109421 5_1:+12668532 None:intergenic
TACCTCTAAATTGTTGTTTC+AGG 0.131744 5_1:+12662497 None:intergenic
CAGATGCCAATTTATATCTT+AGG 0.171441 5_1:-12662456 Msa0718420:three_prime_UTR
CAATTTAGAGGTATTGTTTA+TGG 0.177672 5_1:-12662487 Msa0718420:three_prime_UTR
GGCGGCTGATGCTCATATTT+TGG 0.177729 5_1:-12669158 Msa0718420:CDS
CCACAGTTTCCTGGACTTTC+CGG 0.183968 5_1:-12666717 Msa0718420:CDS
ATACGCTGATAAGTTGAATT+TGG 0.192262 5_1:+12670437 None:intergenic
TTCCACCAAACCTTTATAAT+AGG 0.195321 5_1:+12664242 None:intergenic
GTACTATTATTTATATTTAT+AGG 0.196867 5_1:-12662529 Msa0718420:three_prime_UTR
AACCTCAAACAGCACAATTT+AGG 0.201766 5_1:-12670466 Msa0718420:five_prime_UTR
AACATGTTCTGCGGCGAATC+TGG 0.212068 5_1:+12668674 None:intergenic
GTGTCAAATGATGTTAAAAT+TGG 0.233662 5_1:-12669286 Msa0718420:CDS
AGGAGCTTGAAAACTTCTTT+AGG 0.247131 5_1:-12668580 Msa0718420:CDS
TCTAAAACATTCTTGACTTC+TGG 0.270928 5_1:+12668752 None:intergenic
TTCTACCCTAAGATATAAAT+TGG 0.278397 5_1:+12662450 None:intergenic
CAATCACAACACACAGTAAA+AGG 0.283646 5_1:+12663884 None:intergenic
ACCTCAAACAGCACAATTTA+GGG 0.290842 5_1:-12670465 Msa0718420:five_prime_UTR
GCGTCAAGCGCCGCGTTATT+TGG 0.293754 5_1:+12670558 None:intergenic
TGTCACACCCCAAGGATTAT+TGG 0.294912 5_1:+12662826 None:intergenic
CACAGTTTCCTGGACTTTCC+GGG 0.295395 5_1:-12666716 Msa0718420:CDS
GAAATATATGCTTTAGTTCC+TGG 0.296044 5_1:-12663573 Msa0718420:three_prime_UTR
TTATCAGCGTATCCAATTTA+GGG 0.296470 5_1:-12670426 Msa0718420:five_prime_UTR
ACGTAAGAGCCCATCTTATA+TGG 0.307472 5_1:-12663979 Msa0718420:CDS
CACTATTCTGACTGTTCAAA+TGG 0.310977 5_1:+12662592 None:intergenic
TACGAAAGGCATAACATAAA+AGG 0.323371 5_1:-12665422 Msa0718420:CDS
TAGAATATATATTTAATGTT+AGG 0.327948 5_1:-12662432 Msa0718420:three_prime_UTR
TGGCACTCACAACGTCTTCT+TGG 0.335482 5_1:-12664284 Msa0718420:CDS
TATTGATAATCTTGCTGGTT+TGG 0.335988 5_1:-12669386 Msa0718420:CDS
GGGTGTGACACCTTTCAAAA+AGG 0.336957 5_1:-12662813 Msa0718420:intron
TCCACCAAACCTTTATAATA+GGG 0.338104 5_1:+12664243 None:intergenic
GCCTGTGAATGTTGAAAATC+AGG 0.345539 5_1:-12665363 Msa0718420:intron
GAGGCAGGTTGTGGTGTAGT+AGG 0.349558 5_1:+12668914 None:intergenic
GGAGCTTGAAAACTTCTTTA+GGG 0.352045 5_1:-12668579 Msa0718420:CDS
AGCCATTCTCCATAAAATTT+GGG 0.353493 5_1:+12668533 None:intergenic
TAAGATGGGCTCTTACGTTT+AGG 0.359154 5_1:+12663984 None:intergenic
GGACATGCACCACAGTTTCC+TGG 0.366165 5_1:-12666726 Msa0718420:CDS
GAGGAGAGAAAACCCTAAAT+TGG 0.367657 5_1:+12670414 None:intergenic
ACCCTAAATTGTGCTGTTTG+AGG 0.368751 5_1:+12670464 None:intergenic
CATAGGACCTTCTGCTGATT+GGG 0.368858 5_1:-12663716 Msa0718420:three_prime_UTR
ACATAGGACCTTCTGCTGAT+TGG 0.380929 5_1:-12663717 Msa0718420:three_prime_UTR
ACCCTGAAACAACAATTTAG+AGG 0.382932 5_1:-12662499 Msa0718420:three_prime_UTR
TTGTTATTACTCAACGATAT+AGG 0.385173 5_1:+12668938 None:intergenic
CGAAGTGGGTCAGGGTGTTC+CGG 0.386279 5_1:-12669509 Msa0718420:CDS
TGAGCATCAGCCGCCTCAAC+TGG 0.386484 5_1:+12669166 None:intergenic
CTTATGACCAAACGTCCTGC+TGG 0.387571 5_1:+12662866 None:intergenic
GAAGTTTCCTCTACAGTAAC+CGG 0.388879 5_1:+12669325 None:intergenic
ATGATTATTGATAATCTTGC+TGG 0.390384 5_1:-12669391 Msa0718420:CDS
AGAAAACGACGAAGTGGGTC+AGG 0.392643 5_1:-12669518 Msa0718420:CDS
GCTTCAACTAGTCCACAATT+AGG 0.393303 5_1:-12669427 Msa0718420:CDS
TACTTGTTTGTGTAGTTAGA+AGG 0.394996 5_1:-12663859 Msa0718420:three_prime_UTR
CCGGAGATATGCTGCTGAAC+AGG 0.399445 5_1:-12664318 Msa0718420:CDS
AGTTGGTGACCCTATTATAA+AGG 0.400416 5_1:-12664252 Msa0718420:intron
CATGTTAATATGAGCTAGTA+AGG 0.400793 5_1:-12662381 Msa0718420:three_prime_UTR
TATACTTGTGGCCAGCTTAA+CGG 0.401447 5_1:+12662305 None:intergenic
TGCTGCTGAACAGGCTATGC+GGG 0.403913 5_1:-12664309 Msa0718420:CDS
GTCACACCCCAAGGATTATT+GGG 0.409667 5_1:+12662827 None:intergenic
ATCAGACCCAGCAGGACGTT+TGG 0.410529 5_1:-12662873 Msa0718420:three_prime_UTR
ACCTCTAAATTGTTGTTTCA+GGG 0.412735 5_1:+12662498 None:intergenic
GAGGCAGGTTGTGGTGTAGT+AGG 0.418578 5_1:+12668851 None:intergenic
ACTGCATTATCCATATAAGA+TGG 0.421547 5_1:+12663969 None:intergenic
CGATCCTACTACACCACAAC+CGG 0.426057 5_1:-12668792 Msa0718420:CDS
TGATCATCCCAATAATCCTT+GGG 0.427480 5_1:-12662834 Msa0718420:three_prime_UTR
AACATATGTGGCTGCTAGGT+TGG 0.437374 5_1:-12663755 Msa0718420:three_prime_UTR
CTGAACAGGCTATGCGGGGT+TGG 0.442024 5_1:-12664304 Msa0718420:CDS
CAAGGATTATTGGGATGATC+AGG 0.443990 5_1:+12662836 None:intergenic
ATGGAGAGCTGTAATGAGGT+TGG 0.446791 5_1:-12668383 Msa0718420:CDS
AGATGCCAATTTATATCTTA+GGG 0.447119 5_1:-12662455 Msa0718420:three_prime_UTR
CTGATCATCCCAATAATCCT+TGG 0.447173 5_1:-12662835 Msa0718420:three_prime_UTR
TCATTATGATTTGACAGTAT+AGG 0.447670 5_1:+12668875 None:intergenic
ACACCTTCTGAAACAACCTT+GGG 0.452686 5_1:+12669226 None:intergenic
CCTGTTCAGCAGCATATCTC+CGG 0.454295 5_1:+12664318 None:intergenic
ACAGCCGCTTCACAGACTTC+GGG 0.456824 5_1:+12668983 None:intergenic
TTCATTAGATTCCGTTAAGC+TGG 0.459911 5_1:-12662316 Msa0718420:three_prime_UTR
TGTCTTAACTGTGGTCTTGA+CGG 0.460731 5_1:+12663927 None:intergenic
CTTTAGTTCCTGGCCTTCTG+AGG 0.460964 5_1:-12663563 Msa0718420:three_prime_UTR
ACCTCCTCCCTCAGAAGGCC+AGG 0.463185 5_1:+12663555 None:intergenic
AACAGCCGCTTCACAGACTT+CGG 0.465197 5_1:+12668982 None:intergenic
TGGAGAGCTGTAATGAGGTT+GGG 0.468118 5_1:-12668382 Msa0718420:CDS
TCGTTATGATTTGACAGTAT+AGG 0.469624 5_1:+12668812 None:intergenic
ACATATGTGGCTGCTAGGTT+GGG 0.470840 5_1:-12663754 Msa0718420:three_prime_UTR
TTGTGCTGTTTGAGGTTTGA+AGG 0.481385 5_1:+12670472 None:intergenic
ACATGTTCTGCGGCGAATCT+GGG 0.482417 5_1:+12668675 None:intergenic
AACACCTTCTGAAACAACCT+TGG 0.483020 5_1:+12669225 None:intergenic
TGTGTCTAGGGTTTAGCATC+AGG 0.485970 5_1:-12664347 Msa0718420:intron
GATGCATCTTGAAGTTCAAC+CGG 0.489348 5_1:-12669344 Msa0718420:CDS
GTATTAGAAGAGGCAGGTTG+TGG 0.491030 5_1:+12668842 None:intergenic
GTATCATCAGAGGCCGGTTG+TGG 0.492124 5_1:+12668779 None:intergenic
GCATCAGAAGAGGCAGGTTG+TGG 0.496341 5_1:+12668905 None:intergenic
GCAGCTTAAGAGCATCAGTA+TGG 0.497356 5_1:-12664106 Msa0718420:intron
AATCTCTCATGGCTATAAGT+TGG 0.497719 5_1:+12663824 None:intergenic
AATGATAGCGGTGGAGGTTG+AGG 0.504545 5_1:-12669011 Msa0718420:CDS
GAGGCCGGTTGTGGTGTAGT+AGG 0.507115 5_1:+12668788 None:intergenic
TTGGAGTAAAAGAACTGAGC+GGG 0.507502 5_1:+12670577 None:intergenic
TGTCAAATGATGTTAAAATT+GGG 0.507836 5_1:-12669285 Msa0718420:CDS
TCCTCTACATTAACATTCGC+CGG 0.508778 5_1:+12669490 None:intergenic
GTAAAAGAACTGAGCGGGAG+AGG 0.509889 5_1:+12670582 None:intergenic
TTGAAAACTTCTTTAGGGAG+AGG 0.509895 5_1:-12668574 Msa0718420:CDS
TATTATGACGGAAATGAGTC+GGG 0.512876 5_1:-12668632 Msa0718420:CDS
CCTTCAATCTCAATTTGCAC+AGG 0.513936 5_1:-12670376 Msa0718420:intron
TCATTTGTATTAGAAGAGGC+AGG 0.520784 5_1:+12668836 None:intergenic
TTTAGTTCCTGGCCTTCTGA+GGG 0.521417 5_1:-12663562 Msa0718420:three_prime_UTR
TACAAAAGAAAACGACGAAG+TGG 0.521599 5_1:-12669524 Msa0718420:CDS
ATGTAAGTTGTGGCGGAGTG+TGG 0.521969 5_1:-12667533 Msa0718420:CDS
TCATTTGCATCAGAAGAGGC+AGG 0.525063 5_1:+12668899 None:intergenic
CCAAAGTACAAAATCTCTCA+TGG 0.526781 5_1:+12663813 None:intergenic
CTTCTTTAGGGAGAGGAGCA+TGG 0.528705 5_1:-12668567 Msa0718420:CDS
CATTGAGCACTTTATACTTG+TGG 0.529465 5_1:+12662293 None:intergenic
GATGCTGATCATTATTATGA+CGG 0.531097 5_1:-12668644 Msa0718420:CDS
TCCTGGCCTTCTGAGGGAGG+AGG 0.531182 5_1:-12663556 Msa0718420:intron
TTATTATGACGGAAATGAGT+CGG 0.531420 5_1:-12668633 Msa0718420:CDS
CATGCCTATGCTAACATATG+TGG 0.531856 5_1:-12663767 Msa0718420:three_prime_UTR
CTTCTTGGCAATGGTGAAGT+TGG 0.532211 5_1:-12664269 Msa0718420:CDS
AGTTCCTGGCCTTCTGAGGG+AGG 0.532344 5_1:-12663559 Msa0718420:three_prime_UTR
ATAAATATAAATAATAGTAC+AGG 0.532345 5_1:+12662532 None:intergenic
ACTATTCTGACTGTTCAAAT+GGG 0.533014 5_1:+12662593 None:intergenic
CTGTGCAAATTGAGATTGAA+GGG 0.538165 5_1:+12670377 None:intergenic
TTGAAAGGTGTCACACCCCA+AGG 0.539280 5_1:+12662818 None:intergenic
TATGCCTTTCGTAATCAAGA+AGG 0.542010 5_1:+12665432 None:intergenic
ACAGTAAAAGGAATATAGAA+AGG 0.546394 5_1:+12663896 None:intergenic
AAACCCAAGGTTGTTTCAGA+AGG 0.546742 5_1:-12669229 Msa0718420:CDS
ATACGCTTCTTGTGGGAAGT+AGG 0.548499 5_1:+12662221 None:intergenic
TGATGAGGATCAATTCTTGA+GGG 0.548659 5_1:+12662661 None:intergenic
GGCCTTGTATCATCAGAGGC+CGG 0.550048 5_1:+12668773 None:intergenic
TCACCTTCTCATAAAATCCC+CGG 0.551152 5_1:+12666698 None:intergenic
CTGCATTATCCATATAAGAT+GGG 0.554084 5_1:+12663970 None:intergenic
TCATCATCATCTCCTAATTG+TGG 0.554329 5_1:+12669415 None:intergenic
TATTGAAATGATAGCGGTGG+AGG 0.554702 5_1:-12669017 Msa0718420:CDS
AGTTCAACCGGTTACTGTAG+AGG 0.554846 5_1:-12669332 Msa0718420:CDS
CCTTCACACGGTTCCAGTTG+AGG 0.558712 5_1:-12669179 Msa0718420:CDS
TTATGACCAAACGTCCTGCT+GGG 0.559265 5_1:+12662867 None:intergenic
CATTTGAACAGTCAGAATAG+TGG 0.560731 5_1:-12662591 Msa0718420:three_prime_UTR
ATAAAATCCCCGGAAAGTCC+AGG 0.561547 5_1:+12666708 None:intergenic
CCTGTGCAAATTGAGATTGA+AGG 0.568596 5_1:+12670376 None:intergenic
AGTAACGGTGTTGAGAATGA+TGG 0.568957 5_1:-12669073 Msa0718420:CDS
TGCTAGGTTGGGAACAGCTG+TGG 0.569777 5_1:-12663743 Msa0718420:three_prime_UTR
AGGCCCTTCTTGATTACGAA+AGG 0.570162 5_1:-12665436 Msa0718420:CDS
CTGTTCAGCAGCATATCTCC+GGG 0.570165 5_1:+12664319 None:intergenic
TCAACATTCACAGGCTCTGG+AGG 0.570563 5_1:+12665371 None:intergenic
GCTCCTTCATAAAAGCTGCT+TGG 0.572842 5_1:+12668597 None:intergenic
TTAGAAGTTGAAAGTAAGGG+TGG 0.573767 5_1:-12668734 Msa0718420:CDS
CTAGTTACTCCTTACTTTGG+GGG 0.574185 5_1:+12667496 None:intergenic
GGAACAGCTGTGGTTGACAT+AGG 0.574547 5_1:-12663733 Msa0718420:three_prime_UTR
CTCAACTGGAACCGTGTGAA+GGG 0.574843 5_1:+12669180 None:intergenic
ACAGTTTCCTGGACTTTCCG+GGG 0.575226 5_1:-12666715 Msa0718420:CDS
GTAGTACCTCCTCCCTCAGA+AGG 0.576961 5_1:+12663550 None:intergenic
TCAGCTGTGGTAACGCTGCA+TGG 0.579783 5_1:-12662634 Msa0718420:three_prime_UTR
GGCTCTGGAGGAGATGTGAC+AGG 0.581414 5_1:+12665383 None:intergenic
AGGTTCATTTGCATCAGAAG+AGG 0.583304 5_1:+12668895 None:intergenic
TGTTAAAATTGGGAAGGAAG+AGG 0.583384 5_1:-12669275 Msa0718420:CDS
AAACTTCCTCTGAGTAGTAA+CGG 0.584178 5_1:-12669088 Msa0718420:CDS
CATTCTCCATAAAATTTGGG+AGG 0.584904 5_1:+12668536 None:intergenic
GTTTAGCATCAGGTAGATCC+CGG 0.586774 5_1:-12664337 Msa0718420:CDS
ATGCCTTTCGTAATCAAGAA+GGG 0.591525 5_1:+12665433 None:intergenic
ACGCAAATTTCATGTTGAAG+CGG 0.593284 5_1:+12670508 None:intergenic
GCAGCCACATATGTTAGCAT+AGG 0.593708 5_1:+12663763 None:intergenic
TCACAACGTCTTCTTGGCAA+TGG 0.594276 5_1:-12664278 Msa0718420:CDS
AACCGGCCTCTGATGATACA+AGG 0.594824 5_1:-12668775 Msa0718420:CDS
CCTCAACTGGAACCGTGTGA+AGG 0.594860 5_1:+12669179 None:intergenic
AAATGAGTCGGGAACAGAAG+AGG 0.595188 5_1:-12668621 Msa0718420:CDS
GGTTATGGAGAGCTGTAATG+AGG 0.597735 5_1:-12668387 Msa0718420:CDS
AGGTTCATTTGTATTAGAAG+AGG 0.598877 5_1:+12668832 None:intergenic
TGCTAACATATGTGGCTGCT+AGG 0.601537 5_1:-12663759 Msa0718420:three_prime_UTR
CTGATGAGGATCAATTCTTG+AGG 0.604531 5_1:+12662660 None:intergenic
AAATGATGTTAAAATTGGGA+AGG 0.607157 5_1:-12669281 Msa0718420:CDS
AGGTAACCTCATGTAAGTTG+TGG 0.607979 5_1:-12667543 Msa0718420:CDS
TTCTGGCCTTGTATCATCAG+AGG 0.608082 5_1:+12668769 None:intergenic
CTTACTAGCTCATATTAACA+TGG 0.609933 5_1:+12662382 None:intergenic
TGTAAGTTGTGGCGGAGTGT+GGG 0.610524 5_1:-12667532 Msa0718420:CDS
TCACACGGTTCCAGTTGAGG+CGG 0.617184 5_1:-12669176 Msa0718420:CDS
TAACCTCATGTAAGTTGTGG+CGG 0.622380 5_1:-12667540 Msa0718420:CDS
GAGGTTGGGAGGCTATGAGA+AGG 0.627081 5_1:-12668368 Msa0718420:intron
CGTGTTCAATCAGACCCAGC+AGG 0.633668 5_1:-12662881 Msa0718420:three_prime_UTR
TATAAAATATGCATGATGGT+TGG 0.635367 5_1:-12662339 Msa0718420:three_prime_UTR
GAAGCCCGAAGTCTGTGAAG+CGG 0.638551 5_1:-12668987 Msa0718420:CDS
TGTCAAAATAATGTTAGTGA+TGG 0.638630 5_1:-12669043 Msa0718420:CDS
ATGCTGCTGAACAGGCTATG+CGG 0.643981 5_1:-12664310 Msa0718420:CDS
GCAGGACGTTTGGTCATAAG+CGG 0.645787 5_1:-12662863 Msa0718420:three_prime_UTR
ATGTTATAAAATATGCATGA+TGG 0.647166 5_1:-12662343 Msa0718420:three_prime_UTR
ACAAAAGAAAACGACGAAGT+GGG 0.649473 5_1:-12669523 Msa0718420:CDS
GAAAACGACGAAGTGGGTCA+GGG 0.651529 5_1:-12669517 Msa0718420:CDS
TGAAGATGCTTCTGATGTGA+AGG 0.653690 5_1:-12669122 Msa0718420:CDS
ACCACAGCTGATGTCTGATG+AGG 0.655388 5_1:+12662646 None:intergenic
TCCGGCGAATGTTAATGTAG+AGG 0.660878 5_1:-12669491 Msa0718420:CDS
TCCTCATCAGACATCAGCTG+TGG 0.666911 5_1:-12662647 Msa0718420:three_prime_UTR
TGGTGATATTGAAATGATAG+CGG 0.670988 5_1:-12669023 Msa0718420:CDS
GATCATCCCAATAATCCTTG+GGG 0.671661 5_1:-12662833 Msa0718420:three_prime_UTR
TGTTCAAGATACCCTTCACA+CGG 0.675408 5_1:-12669191 Msa0718420:CDS
AGATGCTTCTGATGTGAAGG+TGG 0.677639 5_1:-12669119 Msa0718420:CDS
AAGGGCGATCCTAAAGTGTG+AGG 0.678196 5_1:+12670395 None:intergenic
GCTGCTGAACAGGCTATGCG+GGG 0.681802 5_1:-12664308 Msa0718420:CDS
AGAGCTGTAATGAGGTTGGG+AGG 0.685164 5_1:-12668379 Msa0718420:CDS
TGATATTGAAATGATAGCGG+TGG 0.687218 5_1:-12669020 Msa0718420:CDS
CCGGAAAGTCCAGGAAACTG+TGG 0.687700 5_1:+12666717 None:intergenic
TCAACACCGTTACTACTCAG+AGG 0.690526 5_1:+12669082 None:intergenic
GGATGAAAATGTGAAACCCA+AGG 0.695062 5_1:-12669242 Msa0718420:CDS
GAAAGGCATAACATAAAAGG+CGG 0.700632 5_1:-12665419 Msa0718420:CDS
GAAGGAAGAGGTGCATGCTG+AGG 0.700761 5_1:-12669263 Msa0718420:CDS
ACTCCGCCACAACTTACATG+AGG 0.707054 5_1:+12667537 None:intergenic
GAGTAACCGTGTCTTAACTG+TGG 0.708661 5_1:+12663918 None:intergenic
TCAAGACCACAGTTAAGACA+CGG 0.711149 5_1:-12663924 Msa0718420:exon
TTTGGAGTAAAAGAACTGAG+CGG 0.712406 5_1:+12670576 None:intergenic
ATAATGCAGTCAAAGCAGCA+CGG 0.717518 5_1:-12663956 Msa0718420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAAAAAAAACATAAAAA+TGG + chr5_1:12663215-12663234 None:intergenic 10.0%
!!! TTTTTTGTTAGATTAATAAA+TGG - chr5_1:12665035-12665054 Msa0718420:intron 10.0%
!! GTTATATATATATATATATG+GGG - chr5_1:12666412-12666431 Msa0718420:intron 10.0%
!! TTATATATATATATATATGG+GGG - chr5_1:12666413-12666432 Msa0718420:intron 10.0%
!!! TCAAATTAATTTTAAATTGA+AGG - chr5_1:12666524-12666543 Msa0718420:intron 10.0%
!!! TTTTTTAGTAAATAATTAGT+GGG - chr5_1:12667126-12667145 Msa0718420:intron 10.0%
!! TTAAAAAAACAAGATTAAAT+AGG + chr5_1:12667832-12667851 None:intergenic 10.0%
!!! ATAAATTTTAATTATGTTGA+AGG - chr5_1:12668784-12668803 Msa0718420:CDS 10.0%
!! AAAATAATTATGGTTTAAAA+AGG + chr5_1:12670073-12670092 None:intergenic 10.0%
!! ATAAATATAAATAATAGTAC+AGG + chr5_1:12670320-12670339 None:intergenic 10.0%
!! GTACTATTATTTATATTTAT+AGG - chr5_1:12670320-12670339 Msa0718420:intron 10.0%
!! TAGAATATATATTTAATGTT+AGG - chr5_1:12670417-12670436 Msa0718420:five_prime_UTR 10.0%
!! TTGAATTAATATAATGAAGT+TGG - chr5_1:12663254-12663273 Msa0718420:intron 15.0%
!! AAAATGATTAAATATTGTAG+AGG - chr5_1:12664570-12664589 Msa0718420:intron 15.0%
!!! ACAATTTTCTTTTAATTCTT+GGG - chr5_1:12665124-12665143 Msa0718420:intron 15.0%
!! AAATGAAAATTGGAAATATA+AGG + chr5_1:12665426-12665445 None:intergenic 15.0%
!! GAAAAAAAACAAATGAAAAT+TGG + chr5_1:12665436-12665455 None:intergenic 15.0%
!! AATGTCAAAATTCAAATAAA+AGG + chr5_1:12666208-12666227 None:intergenic 15.0%
!! TAGAAATTACAAATATAGTT+TGG - chr5_1:12666228-12666247 Msa0718420:intron 15.0%
!! AGAAATTACAAATATAGTTT+GGG - chr5_1:12666229-12666248 Msa0718420:intron 15.0%
!!! ATTAATTTGAATAGACAAAA+GGG + chr5_1:12666514-12666533 None:intergenic 15.0%
!!! AATTAATTTGAATAGACAAA+AGG + chr5_1:12666515-12666534 None:intergenic 15.0%
!!! TTGTTCAACTTAATTTTAAA+AGG + chr5_1:12667095-12667114 None:intergenic 15.0%
!!! CTTTTTTAGTAAATAATTAG+TGG - chr5_1:12667125-12667144 Msa0718420:intron 15.0%
!!! AATTTTGTTGGTATATTTAT+AGG - chr5_1:12667740-12667759 Msa0718420:intron 15.0%
!! CTTTCTTGAAATTAAATATA+AGG - chr5_1:12668152-12668171 Msa0718420:intron 15.0%
!! TGCAGTTAATAATAATATAT+GGG + chr5_1:12668216-12668235 None:intergenic 15.0%
!! ATGCAGTTAATAATAATATA+TGG + chr5_1:12668217-12668236 None:intergenic 15.0%
!! ATTTACTATGAATATTTACA+TGG + chr5_1:12669588-12669607 None:intergenic 15.0%
!! AAAGATTTATTATATAGACT+GGG + chr5_1:12669623-12669642 None:intergenic 15.0%
!! TAAAGATTTATTATATAGAC+TGG + chr5_1:12669624-12669643 None:intergenic 15.0%
!! AATAAATAATTTGATGAATC+AGG - chr5_1:12670154-12670173 Msa0718420:intron 15.0%
!! AATTAGAAATGACAACATTA+GGG - chr5_1:12662862-12662881 Msa0718420:three_prime_UTR 20.0%
!! AAAACATAAAAATGGAATCA+AGG + chr5_1:12663207-12663226 None:intergenic 20.0%
!! TTCAACATTCAAGAAAAAAT+TGG + chr5_1:12663239-12663258 None:intergenic 20.0%
!! TGTCAAATGATGTTAAAATT+GGG - chr5_1:12663564-12663583 Msa0718420:three_prime_UTR 20.0%
!! ATTTATGTCATATTCAAAGA+TGG + chr5_1:12664385-12664404 None:intergenic 20.0%
!! AAACATTCAACATAATAGAA+AGG + chr5_1:12664522-12664541 None:intergenic 20.0%
!! AGATAATTTAAACTCTTAGA+AGG - chr5_1:12664783-12664802 Msa0718420:intron 20.0%
!! CAAATACAATTCAAAATATG+TGG - chr5_1:12664882-12664901 Msa0718420:intron 20.0%
!! TCATGAGAATTTATGATAAT+TGG + chr5_1:12664930-12664949 None:intergenic 20.0%
!!! TAATGGTATTTGTTAATTAC+TGG - chr5_1:12664965-12664984 Msa0718420:intron 20.0%
!!! CACAATTTTCTTTTAATTCT+TGG - chr5_1:12665123-12665142 Msa0718420:intron 20.0%
!! TTATAGGATATATACCTAAT+TGG - chr5_1:12665268-12665287 Msa0718420:intron 20.0%
!! GTTTCAAATTACAAGAATAA+CGG + chr5_1:12665582-12665601 None:intergenic 20.0%
!!! TTTTTTTTTTATGATATGGG+TGG - chr5_1:12665995-12666014 Msa0718420:intron 20.0%
!! ATATATTACTGAGAATAATC+AGG + chr5_1:12666073-12666092 None:intergenic 20.0%
!! CAATCTTGTGAAAAATAAAT+TGG - chr5_1:12666329-12666348 Msa0718420:intron 20.0%
!!! TGTTTTAGTAAAATACAAGT+GGG + chr5_1:12666491-12666510 None:intergenic 20.0%
!! AAAAAATTATGTCCATGTAT+TGG + chr5_1:12666564-12666583 None:intergenic 20.0%
!! ATAAATCAATTCTACAACAT+TGG + chr5_1:12666774-12666793 None:intergenic 20.0%
!!! ATTAAGTTGAATAATGACAA+AGG - chr5_1:12666879-12666898 Msa0718420:intron 20.0%
!!! TTAAGTTGAATAATGACAAA+GGG - chr5_1:12666880-12666899 Msa0718420:intron 20.0%
!!! CAACTTAATTTTAAAAGGAA+GGG + chr5_1:12667090-12667109 None:intergenic 20.0%
!!! TCAACTTAATTTTAAAAGGA+AGG + chr5_1:12667091-12667110 None:intergenic 20.0%
!!! ATTAAGTTGAACAATGATAA+AGG - chr5_1:12667101-12667120 Msa0718420:intron 20.0%
!!! TTAAGTTGAACAATGATAAA+GGG - chr5_1:12667102-12667121 Msa0718420:intron 20.0%
!! AACAAGAATATATATATAGG+GGG + chr5_1:12667204-12667223 None:intergenic 20.0%
!! CAACAAGAATATATATATAG+GGG + chr5_1:12667205-12667224 None:intergenic 20.0%
!! CCAACAAGAATATATATATA+GGG + chr5_1:12667206-12667225 None:intergenic 20.0%
!! ACCAACAAGAATATATATAT+AGG + chr5_1:12667207-12667226 None:intergenic 20.0%
!! GAACAATAATGATCTATATA+AGG - chr5_1:12667540-12667559 Msa0718420:CDS 20.0%
!!! GTTTTTTTTGCTTACATTTT+GGG + chr5_1:12667796-12667815 None:intergenic 20.0%
!!! AGTTTTTTTTGCTTACATTT+TGG + chr5_1:12667797-12667816 None:intergenic 20.0%
!!! GAATAAACAAAAGTTTTTCT+TGG + chr5_1:12667868-12667887 None:intergenic 20.0%
!! TTAATAATAATATATGGGTG+GGG + chr5_1:12668211-12668230 None:intergenic 20.0%
!! GTTAATAATAATATATGGGT+GGG + chr5_1:12668212-12668231 None:intergenic 20.0%
!! AGTTAATAATAATATATGGG+TGG + chr5_1:12668213-12668232 None:intergenic 20.0%
!! AAGAAAACAGAAAATGAAAA+AGG + chr5_1:12668651-12668670 None:intergenic 20.0%
!! AAAATTTATAGCACAAGAAA+TGG + chr5_1:12668773-12668792 None:intergenic 20.0%
!! AAGATTTATTATATAGACTG+GGG + chr5_1:12669622-12669641 None:intergenic 20.0%
!! ATAATTATGGTTTAAAAAGG+AGG + chr5_1:12670070-12670089 None:intergenic 20.0%
!! CAAGAACAACAAAATAATTA+TGG + chr5_1:12670083-12670102 None:intergenic 20.0%
!! ATGTTATAAAATATGCATGA+TGG - chr5_1:12670506-12670525 Msa0718420:five_prime_UTR 20.0%
!!! CGTCGTTTTTTTTGTTTTTT+GGG + chr5_1:12662236-12662255 None:intergenic 25.0%
!!! ACGTCGTTTTTTTTGTTTTT+TGG + chr5_1:12662237-12662256 None:intergenic 25.0%
!!! CAAAAGCACGTTTTTTTTTT+TGG - chr5_1:12662593-12662612 Msa0718420:three_prime_UTR 25.0%
!!! TTTTTTGGTTTAGTAAACCA+TGG - chr5_1:12662608-12662627 Msa0718420:three_prime_UTR 25.0%
! TTGTTCTATAAGTAGATTAC+TGG - chr5_1:12662631-12662650 Msa0718420:three_prime_UTR 25.0%
! GAATTAGAAATGACAACATT+AGG - chr5_1:12662861-12662880 Msa0718420:three_prime_UTR 25.0%
! TATAAGAGAAACTAGTAAGA+AGG - chr5_1:12663039-12663058 Msa0718420:intron 25.0%
!!! TAATATAATGAAGTTGGTGT+AGG - chr5_1:12663260-12663279 Msa0718420:intron 25.0%
!!! AATATAATGAAGTTGGTGTA+GGG - chr5_1:12663261-12663280 Msa0718420:intron 25.0%
!! ATGATTATTGATAATCTTGC+TGG - chr5_1:12663458-12663477 Msa0718420:intron 25.0%
! GTGTCAAATGATGTTAAAAT+TGG - chr5_1:12663563-12663582 Msa0718420:three_prime_UTR 25.0%
! AAATGATGTTAAAATTGGGA+AGG - chr5_1:12663568-12663587 Msa0718420:three_prime_UTR 25.0%
! TGTCAAAATAATGTTAGTGA+TGG - chr5_1:12663806-12663825 Msa0718420:three_prime_UTR 25.0%
!! TTGTTATTACTCAACGATAT+AGG + chr5_1:12663914-12663933 None:intergenic 25.0%
! TCATTATGATTTGACAGTAT+AGG + chr5_1:12663977-12663996 None:intergenic 25.0%
!!! TGTTTTAGAAGTTGAAAGTA+AGG - chr5_1:12664111-12664130 Msa0718420:CDS 25.0%
!!! GTTTTAGAAGTTGAAAGTAA+GGG - chr5_1:12664112-12664131 Msa0718420:CDS 25.0%
! TTCATTCAAATTTATGTAGC+TGG - chr5_1:12664540-12664559 Msa0718420:intron 25.0%
!! TCCATAGCGATTTTAAATAT+TGG - chr5_1:12664593-12664612 Msa0718420:intron 25.0%
!! ACCAATATTTAAAATCGCTA+TGG + chr5_1:12664597-12664616 None:intergenic 25.0%
!!! CGATTTTAAATATTGGTTGA+TGG - chr5_1:12664600-12664619 Msa0718420:intron 25.0%
!!! AGTTGTTTTGAGATTGAATT+TGG - chr5_1:12664647-12664666 Msa0718420:intron 25.0%
! ACAACACACATATAAATATG+TGG - chr5_1:12664760-12664779 Msa0718420:intron 25.0%
! ATCATAAATTCTCATGACAA+TGG - chr5_1:12664933-12664952 Msa0718420:intron 25.0%
! ATCTAACAAAAAAGATTCCT+GGG + chr5_1:12665028-12665047 None:intergenic 25.0%
! AATCTAACAAAAAAGATTCC+TGG + chr5_1:12665029-12665048 None:intergenic 25.0%
! TTTGTAAATTTGGCTACTTA+AGG - chr5_1:12665084-12665103 Msa0718420:intron 25.0%
!!! AAGTTGTTTTCGTTGTTTAT+AGG - chr5_1:12665252-12665271 Msa0718420:intron 25.0%
! TTCAAAAATACAAGCCAATT+AGG + chr5_1:12665285-12665304 None:intergenic 25.0%
!!! ATTGGCTTGTATTTTTGAAT+AGG - chr5_1:12665286-12665305 Msa0718420:intron 25.0%
! GTTATTTGATGTCAAATTTG+TGG - chr5_1:12665465-12665484 Msa0718420:intron 25.0%
! ATCTTCTTAGAATGTTTGTT+TGG - chr5_1:12665503-12665522 Msa0718420:intron 25.0%
! TCTTCTTAGAATGTTTGTTT+GGG - chr5_1:12665504-12665523 Msa0718420:intron 25.0%
!! ATATGGTCTTAACAAAAAGT+GGG + chr5_1:12665776-12665795 None:intergenic 25.0%
! TTACACATTGGATATTGATA+TGG + chr5_1:12665793-12665812 None:intergenic 25.0%
! TTTATCCAAAAAGCTCAAAA+AGG + chr5_1:12666050-12666069 None:intergenic 25.0%
!!! GTGTTTTAGTAAAATACAAG+TGG + chr5_1:12666492-12666511 None:intergenic 25.0%
! GTTTAGTAATTACCAATACA+TGG - chr5_1:12666549-12666568 Msa0718420:intron 25.0%
!!! TAATTTTTTCCCTGGTTTTT+CGG - chr5_1:12666575-12666594 Msa0718420:intron 25.0%
! AGACAAATCAACATCTATAA+CGG + chr5_1:12666609-12666628 None:intergenic 25.0%
!! GTTGTAGAATTGATTTATGA+TGG - chr5_1:12666776-12666795 Msa0718420:intron 25.0%
!! TAAGTTGAATAATGACAAAG+GGG - chr5_1:12666881-12666900 Msa0718420:intron 25.0%
!! TTTTTCTTCCTGATAAAAAC+AGG + chr5_1:12666961-12666980 None:intergenic 25.0%
!! TTCTTTTCTCGTAAAAACAA+AGG + chr5_1:12666998-12667017 None:intergenic 25.0%
! CCCTATATATATATTCTTGT+TGG - chr5_1:12667203-12667222 Msa0718420:intron 25.0%
! CAATGAAACAAGTGTTAAAA+AGG + chr5_1:12667371-12667390 None:intergenic 25.0%
!! ATGTGATCTGTATTTGATTT+CGG - chr5_1:12667511-12667530 Msa0718420:CDS 25.0%
! CTTATAATCAAGATTGTGTT+GGG - chr5_1:12667630-12667649 Msa0718420:intron 25.0%
!! CTGATTTAAGAGAATTTTGT+TGG - chr5_1:12667728-12667747 Msa0718420:intron 25.0%
!! AAGTTTTTCTTGGAAAAGAT+GGG + chr5_1:12667858-12667877 None:intergenic 25.0%
!! AAAGTTTTTCTTGGAAAAGA+TGG + chr5_1:12667859-12667878 None:intergenic 25.0%
!!! TTTTCATTGGCTATTGATTA+TGG + chr5_1:12667942-12667961 None:intergenic 25.0%
!! GATGTAAAAGCAATTTTCAT+TGG + chr5_1:12667955-12667974 None:intergenic 25.0%
!!! ATTTTTTCCGCTTACAATTT+AGG - chr5_1:12668059-12668078 Msa0718420:intron 25.0%
!!! AATTTCAAGAAAGCATTAAC+CGG + chr5_1:12668145-12668164 None:intergenic 25.0%
! TGAAATTGGTTATTGCAATT+AGG - chr5_1:12668297-12668316 Msa0718420:intron 25.0%
! ATACTGAGAATAATCTAACA+TGG + chr5_1:12668815-12668834 None:intergenic 25.0%
! ACAGTAAAAGGAATATAGAA+AGG + chr5_1:12668956-12668975 None:intergenic 25.0%
! TTACATAATAGTCTACAAAC+AGG + chr5_1:12669508-12669527 None:intergenic 25.0%
! TTATATTGCTCAAGAATGAA+GGG + chr5_1:12669536-12669555 None:intergenic 25.0%
! TTTATATTGCTCAAGAATGA+AGG + chr5_1:12669537-12669556 None:intergenic 25.0%
!! TTTAAGCATTGTAACTTATC+CGG + chr5_1:12669912-12669931 None:intergenic 25.0%
! AAGTTACAATGCTTAAATTG+AGG - chr5_1:12669915-12669934 Msa0718420:intron 25.0%
!!! TTTGTTGTTCTTGAATACAA+TGG - chr5_1:12670090-12670109 Msa0718420:intron 25.0%
!!! CAATTTAGAGGTATTGTTTA+TGG - chr5_1:12670362-12670381 Msa0718420:intron 25.0%
! AGATGCCAATTTATATCTTA+GGG - chr5_1:12670394-12670413 Msa0718420:five_prime_UTR 25.0%
! TTCTACCCTAAGATATAAAT+TGG + chr5_1:12670402-12670421 None:intergenic 25.0%
! TATAAAATATGCATGATGGT+TGG - chr5_1:12670510-12670529 Msa0718420:five_prime_UTR 25.0%
! TTCTTTTACTCCAAATAACG+CGG - chr5_1:12662281-12662300 Msa0718420:three_prime_UTR 30.0%
! ATACGCTGATAAGTTGAATT+TGG + chr5_1:12662415-12662434 None:intergenic 30.0%
TTATCAGCGTATCCAATTTA+GGG - chr5_1:12662423-12662442 Msa0718420:three_prime_UTR 30.0%
!! TCTCAAAACATTGATTTGCA+TGG + chr5_1:12662562-12662581 None:intergenic 30.0%
ATCTACTTATAGAACAACCA+TGG + chr5_1:12662628-12662647 None:intergenic 30.0%
! TATAAGTAGATTACTGGCTA+GGG - chr5_1:12662637-12662656 Msa0718420:three_prime_UTR 30.0%
AGGGTTTAGTATTAATAGCA+AGG - chr5_1:12662656-12662675 Msa0718420:three_prime_UTR 30.0%
! GGGAAAATTTTATCGATCAA+TGG - chr5_1:12662738-12662757 Msa0718420:intron 30.0%
!! ATATAATGAAGTTGGTGTAG+GGG - chr5_1:12663262-12663281 Msa0718420:intron 30.0%
! TATTGATAATCTTGCTGGTT+TGG - chr5_1:12663463-12663482 Msa0718420:intron 30.0%
TGGTGATATTGAAATGATAG+CGG - chr5_1:12663826-12663845 Msa0718420:three_prime_UTR 30.0%
AGGTTCATTTGTATTAGAAG+AGG + chr5_1:12664020-12664039 None:intergenic 30.0%
TCGTTATGATTTGACAGTAT+AGG + chr5_1:12664040-12664059 None:intergenic 30.0%
! TCTAAAACATTCTTGACTTC+TGG + chr5_1:12664100-12664119 None:intergenic 30.0%
GATGCTGATCATTATTATGA+CGG - chr5_1:12664205-12664224 Msa0718420:intron 30.0%
! TTATTATGACGGAAATGAGT+CGG - chr5_1:12664216-12664235 Msa0718420:intron 30.0%
! TTCAAACCTCCCAAATTTTA+TGG - chr5_1:12664307-12664326 Msa0718420:CDS 30.0%
AGCCATTCTCCATAAAATTT+GGG + chr5_1:12664319-12664338 None:intergenic 30.0%
AAGCCATTCTCCATAAAATT+TGG + chr5_1:12664320-12664339 None:intergenic 30.0%
CAACATAGATAACTCACTTA+AGG + chr5_1:12664348-12664367 None:intergenic 30.0%
!! CAAATTTATGTAGCTGGTTT+TGG - chr5_1:12664546-12664565 Msa0718420:intron 30.0%
TTAGACGTGCAAGTAAAATA+TGG - chr5_1:12664720-12664739 Msa0718420:intron 30.0%
! GGTATTTGTTAATTACTGGA+AGG - chr5_1:12664969-12664988 Msa0718420:intron 30.0%
CACCTAACAGTTTGTAAATT+TGG - chr5_1:12665074-12665093 Msa0718420:intron 30.0%
AGCCAAATTTACAAACTGTT+AGG + chr5_1:12665079-12665098 None:intergenic 30.0%
TCATGTCTTGATCTTGTTAA+TGG - chr5_1:12665381-12665400 Msa0718420:CDS 30.0%
! TATGGTCTTAACAAAAAGTG+GGG + chr5_1:12665775-12665794 None:intergenic 30.0%
! GATATGGTCTTAACAAAAAG+TGG + chr5_1:12665777-12665796 None:intergenic 30.0%
TGCAATGTTGTAAAAAAGAG+TGG + chr5_1:12665822-12665841 None:intergenic 30.0%
! ATTGCAATGATAGTGTGTAT+TGG - chr5_1:12665836-12665855 Msa0718420:intron 30.0%
! AATGATAGTGTGTATTGGAA+AGG - chr5_1:12665841-12665860 Msa0718420:intron 30.0%
! GTGGTCACATTTTATGTAAA+TGG - chr5_1:12665880-12665899 Msa0718420:intron 30.0%
TAAATGGAAAAAGCTGTGAT+GGG - chr5_1:12665896-12665915 Msa0718420:intron 30.0%
CGATGCATAATTTCTATCTT+TGG - chr5_1:12666361-12666380 Msa0718420:intron 30.0%
ATATATAACATGTGCCCTAA+GGG + chr5_1:12666401-12666420 None:intergenic 30.0%
TATATATAACATGTGCCCTA+AGG + chr5_1:12666402-12666421 None:intergenic 30.0%
AAACAAAAAACCAATGACGT+TGG + chr5_1:12666676-12666695 None:intergenic 30.0%
! GTAGAATTGATTTATGATGG+TGG - chr5_1:12666779-12666798 Msa0718420:intron 30.0%
TTTCTCGTAAAAACAAAGGT+TGG + chr5_1:12666994-12667013 None:intergenic 30.0%
TACGAGAAAAGAAAAACATG+AGG - chr5_1:12667005-12667024 Msa0718420:intron 30.0%
GTTGCTAACAAAACAAATGT+CGG + chr5_1:12667037-12667056 None:intergenic 30.0%
!!! GACATTTGTTTTGTTAGCAA+CGG - chr5_1:12667036-12667055 Msa0718420:intron 30.0%
AAACAAGTGTTAAAAAGGTG+AGG + chr5_1:12667366-12667385 None:intergenic 30.0%
! TACGAAAGGCATAACATAAA+AGG - chr5_1:12667427-12667446 Msa0718420:intron 30.0%
ACATTCAGTTAATAAGATCG+TGG + chr5_1:12667579-12667598 None:intergenic 30.0%
GCTTATAATCAAGATTGTGT+TGG - chr5_1:12667629-12667648 Msa0718420:intron 30.0%
!! TTTTTGCTTACATTTTGGGA+CGG + chr5_1:12667792-12667811 None:intergenic 30.0%
! GCTATTGATTATGGAGAAAA+TGG + chr5_1:12667933-12667952 None:intergenic 30.0%
! CAAGTAGCATTCATATTTTC+CGG - chr5_1:12668123-12668142 Msa0718420:intron 30.0%
! ATTAACTGCATTCGAGTTTA+AGG - chr5_1:12668226-12668245 Msa0718420:intron 30.0%
! AGTTTAAGGCATCATTATCT+GGG - chr5_1:12668240-12668259 Msa0718420:intron 30.0%
ACCAATTTCAGATATTGTTC+AGG + chr5_1:12668287-12668306 None:intergenic 30.0%
TCCACCAAACCTTTATAATA+GGG + chr5_1:12668609-12668628 None:intergenic 30.0%
TTCCACCAAACCTTTATAAT+AGG + chr5_1:12668610-12668629 None:intergenic 30.0%
ATTTATAGCACAAGAAATGG+AGG + chr5_1:12668770-12668789 None:intergenic 30.0%
TAGGTACATCTGATTCAATA+AGG + chr5_1:12668849-12668868 None:intergenic 30.0%
CTGCATTATCCATATAAGAT+GGG + chr5_1:12668882-12668901 None:intergenic 30.0%
ACTGCATTATCCATATAAGA+TGG + chr5_1:12668883-12668902 None:intergenic 30.0%
TACTTGTTTGTGTAGTTAGA+AGG - chr5_1:12668990-12669009 Msa0718420:CDS 30.0%
! GAAATATATGCTTTAGTTCC+TGG - chr5_1:12669276-12669295 Msa0718420:CDS 30.0%
GGAAAATTCAGCTTATACAA+AGG - chr5_1:12669473-12669492 Msa0718420:CDS 30.0%
TATATTGCTCAAGAATGAAG+GGG + chr5_1:12669535-12669554 None:intergenic 30.0%
GAATACAATGGCAAATTACT+TGG - chr5_1:12670102-12670121 Msa0718420:intron 30.0%
ACTATTCTGACTGTTCAAAT+GGG + chr5_1:12670259-12670278 None:intergenic 30.0%
!! ACCTCTAAATTGTTGTTTCA+GGG + chr5_1:12670354-12670373 None:intergenic 30.0%
!! TACCTCTAAATTGTTGTTTC+AGG + chr5_1:12670355-12670374 None:intergenic 30.0%
CAGATGCCAATTTATATCTT+AGG - chr5_1:12670393-12670412 Msa0718420:five_prime_UTR 30.0%
CTTACTAGCTCATATTAACA+TGG + chr5_1:12670470-12670489 None:intergenic 30.0%
CATGTTAATATGAGCTAGTA+AGG - chr5_1:12670468-12670487 Msa0718420:five_prime_UTR 30.0%
! TTTGGAGTAAAAGAACTGAG+CGG + chr5_1:12662276-12662295 None:intergenic 35.0%
ACGCAAATTTCATGTTGAAG+CGG + chr5_1:12662344-12662363 None:intergenic 35.0%
AACCTCAAACAGCACAATTT+AGG - chr5_1:12662383-12662402 Msa0718420:three_prime_UTR 35.0%
ACCTCAAACAGCACAATTTA+GGG - chr5_1:12662384-12662403 Msa0718420:three_prime_UTR 35.0%
CTTATCAGCGTATCCAATTT+AGG - chr5_1:12662422-12662441 Msa0718420:three_prime_UTR 35.0%
CTGTGCAAATTGAGATTGAA+GGG + chr5_1:12662475-12662494 None:intergenic 35.0%
! CTATAAGTAGATTACTGGCT+AGG - chr5_1:12662636-12662655 Msa0718420:three_prime_UTR 35.0%
! AATTTTCCCTTCAACTTGAG+CGG + chr5_1:12662727-12662746 None:intergenic 35.0%
TTATCGATCAATGGTAAGAC+CGG - chr5_1:12662747-12662766 Msa0718420:intron 35.0%
ATCACCTAGAGTAGAAAAGA+TGG - chr5_1:12662896-12662915 Msa0718420:intron 35.0%
! TCTACCATCTTTTCTACTCT+AGG + chr5_1:12662903-12662922 None:intergenic 35.0%
AGTAAAGAGAGTAGATCAGA+TGG - chr5_1:12662973-12662992 Msa0718420:intron 35.0%
GAGTCAAATCACTAGAGATA+GGG - chr5_1:12663000-12663019 Msa0718420:intron 35.0%
GGATCTAGAGATTAATGAGT+TGG - chr5_1:12663060-12663079 Msa0718420:intron 35.0%
! TAATGAGTTGGAGAAAGACA+TGG - chr5_1:12663072-12663091 Msa0718420:intron 35.0%
! GAGAAAGACATGGTTTTTGT+TGG - chr5_1:12663082-12663101 Msa0718420:intron 35.0%
! AAGCCTTATCACAATAAGTG+GGG + chr5_1:12663141-12663160 None:intergenic 35.0%
! CAAGCCTTATCACAATAAGT+GGG + chr5_1:12663142-12663161 None:intergenic 35.0%
!! TATAATGAAGTTGGTGTAGG+GGG - chr5_1:12663263-12663282 Msa0718420:intron 35.0%
TACAAAAGAAAACGACGAAG+TGG - chr5_1:12663325-12663344 Msa0718420:intron 35.0%
ACAAAAGAAAACGACGAAGT+GGG - chr5_1:12663326-12663345 Msa0718420:intron 35.0%
TCATCATCATCTCCTAATTG+TGG + chr5_1:12663437-12663456 None:intergenic 35.0%
TGTTAAAATTGGGAAGGAAG+AGG - chr5_1:12663574-12663593 Msa0718420:three_prime_UTR 35.0%
!! TCATATTTTGGATACAGCTG+AGG - chr5_1:12663703-12663722 Msa0718420:three_prime_UTR 35.0%
!! CATATTTTGGATACAGCTGA+GGG - chr5_1:12663704-12663723 Msa0718420:three_prime_UTR 35.0%
!!! ACTACTCAGAGGAAGTTTTT+TGG + chr5_1:12663759-12663778 None:intergenic 35.0%
AAACTTCCTCTGAGTAGTAA+CGG - chr5_1:12663761-12663780 Msa0718420:three_prime_UTR 35.0%
!! TGATATTGAAATGATAGCGG+TGG - chr5_1:12663829-12663848 Msa0718420:three_prime_UTR 35.0%
TCATTTGTATTAGAAGAGGC+AGG + chr5_1:12664016-12664035 None:intergenic 35.0%
TTAGAAGTTGAAAGTAAGGG+TGG - chr5_1:12664115-12664134 Msa0718420:CDS 35.0%
! TCTGGGTTTTCATTATCTAC+AGG + chr5_1:12664160-12664179 None:intergenic 35.0%
TCCAAGAAAAACATGTTCTG+CGG + chr5_1:12664187-12664206 None:intergenic 35.0%
! TATTATGACGGAAATGAGTC+GGG - chr5_1:12664217-12664236 Msa0718420:intron 35.0%
AGGAGCTTGAAAACTTCTTT+AGG - chr5_1:12664269-12664288 Msa0718420:CDS 35.0%
GGAGCTTGAAAACTTCTTTA+GGG - chr5_1:12664270-12664289 Msa0718420:CDS 35.0%
! TTGAAAACTTCTTTAGGGAG+AGG - chr5_1:12664275-12664294 Msa0718420:CDS 35.0%
CATTCTCCATAAAATTTGGG+AGG + chr5_1:12664316-12664335 None:intergenic 35.0%
! CTCCCAAATTTTATGGAGAA+TGG - chr5_1:12664314-12664333 Msa0718420:CDS 35.0%
!! ATTCTAAAATGTTGTCGCTC+TGG - chr5_1:12664412-12664431 Msa0718420:intron 35.0%
TTTGGTGGAACATAAGGTTA+TGG - chr5_1:12664447-12664466 Msa0718420:intron 35.0%
!!! GGTCTTTTTTGTCACTCTTA+TGG - chr5_1:12664668-12664687 Msa0718420:intron 35.0%
ACCTTCTTACATACTGAAGT+GGG + chr5_1:12664826-12664845 None:intergenic 35.0%
TACCTTCTTACATACTGAAG+TGG + chr5_1:12664827-12664846 None:intergenic 35.0%
! TTCACAATGCACTAGCATTT+TGG + chr5_1:12664860-12664879 None:intergenic 35.0%
GACAATGGCATTCAAGATAA+TGG - chr5_1:12664948-12664967 Msa0718420:intron 35.0%
TTAGGTGCATCAAAATCAAC+TGG + chr5_1:12665061-12665080 None:intergenic 35.0%
CTTTAGATGAGCGAAATTTG+AGG - chr5_1:12665162-12665181 Msa0718420:intron 35.0%
! ATTTGAGGCATTCTTTCTTG+AGG - chr5_1:12665177-12665196 Msa0718420:intron 35.0%
!! AGCACTGATGATAGAACTTT+AGG - chr5_1:12665206-12665225 Msa0718420:intron 35.0%
TGCTAGTTACTCCTTACTTT+GGG + chr5_1:12665358-12665377 None:intergenic 35.0%
CAAGAATAACGGTTGTATGA+GGG + chr5_1:12665571-12665590 None:intergenic 35.0%
ACAAGAATAACGGTTGTATG+AGG + chr5_1:12665572-12665591 None:intergenic 35.0%
ACTGTGAAGTTTGCATGTTT+GGG - chr5_1:12665643-12665662 Msa0718420:intron 35.0%
!! AAAAGTATCATGTGTCCGTT+GGG + chr5_1:12665684-12665703 None:intergenic 35.0%
!! TAAAAGTATCATGTGTCCGT+TGG + chr5_1:12665685-12665704 None:intergenic 35.0%
! CTAGCTTTCGAAGTTAAGTT+AGG + chr5_1:12665733-12665752 None:intergenic 35.0%
! ATGGTCTTAACAAAAAGTGG+GGG + chr5_1:12665774-12665793 None:intergenic 35.0%
AGGTTGTTGAGAACAATTTG+TGG - chr5_1:12665861-12665880 Msa0718420:intron 35.0%
GTAAATGGAAAAAGCTGTGA+TGG - chr5_1:12665895-12665914 Msa0718420:intron 35.0%
! TGTGTTTCTTTACCCTTTTC+TGG - chr5_1:12666020-12666039 Msa0718420:intron 35.0%
CAAAAAGGATCTCCAGAAAA+GGG + chr5_1:12666035-12666054 None:intergenic 35.0%
TCAAAAAGGATCTCCAGAAA+AGG + chr5_1:12666036-12666055 None:intergenic 35.0%
!! GAGATCCTTTTTGAGCTTTT+TGG - chr5_1:12666042-12666061 Msa0718420:intron 35.0%
CCTGCATAAGATAAAAACAG+AGG + chr5_1:12666105-12666124 None:intergenic 35.0%
!!! CCTCTGTTTTTATCTTATGC+AGG - chr5_1:12666102-12666121 Msa0718420:intron 35.0%
!! AATCTTAACTTGTGCCCTTA+GGG - chr5_1:12666384-12666403 Msa0718420:intron 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG + chr5_1:12667161-12667180 None:intergenic 35.0%
!!! CATGGACATAATTTTTTCCC+TGG - chr5_1:12666567-12666586 Msa0718420:intron 35.0%
TAGTTCAGTCGACATTCAAT+GGG + chr5_1:12666815-12666834 None:intergenic 35.0%
CGTCATTACACATGATTGTA+AGG + chr5_1:12666844-12666863 None:intergenic 35.0%
TACAATCATGTGTAATGACG+TGG - chr5_1:12666844-12666863 Msa0718420:intron 35.0%
ACAATCATGTGTAATGACGT+GGG - chr5_1:12666845-12666864 Msa0718420:intron 35.0%
ACAAAGGGGTTTAATCTCAT+TGG - chr5_1:12666895-12666914 Msa0718420:intron 35.0%
!!! GCATTCAACCTGTTTTTATC+AGG - chr5_1:12666950-12666969 Msa0718420:intron 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG - chr5_1:12667161-12667180 Msa0718420:intron 35.0%
GTTAAAAAGGTGAGGAATAC+AGG + chr5_1:12667358-12667377 None:intergenic 35.0%
! GCTGTTTCAAATGTTACTCT+AGG - chr5_1:12667393-12667412 Msa0718420:intron 35.0%
ATGCCTTTCGTAATCAAGAA+GGG + chr5_1:12667419-12667438 None:intergenic 35.0%
TATGCCTTTCGTAATCAAGA+AGG + chr5_1:12667420-12667439 None:intergenic 35.0%
! GAAAGGCATAACATAAAAGG+CGG - chr5_1:12667430-12667449 Msa0718420:intron 35.0%
! ACCTGATTTTCAACATTCAC+AGG + chr5_1:12667490-12667509 None:intergenic 35.0%
GGAAGAAGAGCAAAAATTCT+GGG + chr5_1:12668190-12668209 None:intergenic 35.0%
! GAGTTTAAGGCATCATTATC+TGG - chr5_1:12668239-12668258 Msa0718420:intron 35.0%
! GCCTGAACAATATCTGAAAT+TGG - chr5_1:12668283-12668302 Msa0718420:intron 35.0%
! ATTAGGTAAATTTGCTCCCT+TGG - chr5_1:12668314-12668333 Msa0718420:intron 35.0%
CTATTCATAGTCTATGCGAT+AGG + chr5_1:12668344-12668363 None:intergenic 35.0%
! TTCAATTGATGACTGTGTCT+AGG - chr5_1:12668489-12668508 Msa0718420:intron 35.0%
! TCAATTGATGACTGTGTCTA+GGG - chr5_1:12668490-12668509 Msa0718420:intron 35.0%
!! AGTTGGTGACCCTATTATAA+AGG - chr5_1:12668597-12668616 Msa0718420:CDS 35.0%
GTGACCCTATTATAAAGGTT+TGG - chr5_1:12668602-12668621 Msa0718420:CDS 35.0%
ACCCTATTATAAAGGTTTGG+TGG - chr5_1:12668605-12668624 Msa0718420:CDS 35.0%
!! AGAAGCGTTGAACAATTCTA+TGG + chr5_1:12668678-12668697 None:intergenic 35.0%
TTCAACGCTTCTGATTTCTT+AGG - chr5_1:12668686-12668705 Msa0718420:CDS 35.0%
CAATCACAACACACAGTAAA+AGG + chr5_1:12668968-12668987 None:intergenic 35.0%
AATCTCTCATGGCTATAAGT+TGG + chr5_1:12669028-12669047 None:intergenic 35.0%
CCAAAGTACAAAATCTCTCA+TGG + chr5_1:12669039-12669058 None:intergenic 35.0%
! CCATGAGAGATTTTGTACTT+TGG - chr5_1:12669036-12669055 Msa0718420:CDS 35.0%
! TCAGCATAGGACATTTTGAA+GGG + chr5_1:12669665-12669684 None:intergenic 35.0%
TTCAAAATGTCCTATGCTGA+GGG - chr5_1:12669665-12669684 Msa0718420:intron 35.0%
TGATCATCCCAATAATCCTT+GGG - chr5_1:12670015-12670034 Msa0718420:intron 35.0%
! GGAAAACTCACCTTTTTGAA+AGG + chr5_1:12670049-12670068 None:intergenic 35.0%
TGATGAGGATCAATTCTTGA+GGG + chr5_1:12670191-12670210 None:intergenic 35.0%
CACTATTCTGACTGTTCAAA+TGG + chr5_1:12670260-12670279 None:intergenic 35.0%
CATTTGAACAGTCAGAATAG+TGG - chr5_1:12670258-12670277 Msa0718420:intron 35.0%
ACCCTGAAACAACAATTTAG+AGG - chr5_1:12670350-12670369 Msa0718420:intron 35.0%
TTCATTAGATTCCGTTAAGC+TGG - chr5_1:12670533-12670552 Msa0718420:five_prime_UTR 35.0%
CATTGAGCACTTTATACTTG+TGG + chr5_1:12670559-12670578 None:intergenic 35.0%
TTGGAGTAAAAGAACTGAGC+GGG + chr5_1:12662275-12662294 None:intergenic 40.0%
!! TTGTGCTGTTTGAGGTTTGA+AGG + chr5_1:12662380-12662399 None:intergenic 40.0%
!! ACCCTAAATTGTGCTGTTTG+AGG + chr5_1:12662388-12662407 None:intergenic 40.0%
GAGGAGAGAAAACCCTAAAT+TGG + chr5_1:12662438-12662457 None:intergenic 40.0%
! GTTTTCTCTCCTCACACTTT+AGG - chr5_1:12662445-12662464 Msa0718420:three_prime_UTR 40.0%
CCTGTGCAAATTGAGATTGA+AGG + chr5_1:12662476-12662495 None:intergenic 40.0%
CCTTCAATCTCAATTTGCAC+AGG - chr5_1:12662473-12662492 Msa0718420:three_prime_UTR 40.0%
TTCTTTACCACCTAACACAC+CGG + chr5_1:12662769-12662788 None:intergenic 40.0%
!! GCTTTGAAGTGTGGTAAGAA+TGG - chr5_1:12662830-12662849 Msa0718420:three_prime_UTR 40.0%
ATGACAACATTAGGGAGAGT+TGG - chr5_1:12662870-12662889 Msa0718420:three_prime_UTR 40.0%
TGACAACATTAGGGAGAGTT+GGG - chr5_1:12662871-12662890 Msa0718420:three_prime_UTR 40.0%
AGATGGTAGAAACGAGACTT+AGG - chr5_1:12662913-12662932 Msa0718420:intron 40.0%
AGAAACGAGACTTAGGTGTT+TGG - chr5_1:12662920-12662939 Msa0718420:intron 40.0%
GAAACGAGACTTAGGTGTTT+GGG - chr5_1:12662921-12662940 Msa0718420:intron 40.0%
AAAGAGAGTAGATCAGATGG+AGG - chr5_1:12662976-12662995 Msa0718420:intron 40.0%
AAGAGAGTAGATCAGATGGA+GGG - chr5_1:12662977-12662996 Msa0718420:intron 40.0%
GGAGTCAAATCACTAGAGAT+AGG - chr5_1:12662999-12663018 Msa0718420:intron 40.0%
TGACCCCACTTATTGTGATA+AGG - chr5_1:12663135-12663154 Msa0718420:intron 40.0%
! CCAAGCCTTATCACAATAAG+TGG + chr5_1:12663143-12663162 None:intergenic 40.0%
CCACTTATTGTGATAAGGCT+TGG - chr5_1:12663140-12663159 Msa0718420:intron 40.0%
CTTATTGTGATAAGGCTTGG+TGG - chr5_1:12663143-12663162 Msa0718420:intron 40.0%
TCCTCTACATTAACATTCGC+CGG + chr5_1:12663362-12663381 None:intergenic 40.0%
GCTTCAACTAGTCCACAATT+AGG - chr5_1:12663422-12663441 Msa0718420:intron 40.0%
GATGCATCTTGAAGTTCAAC+CGG - chr5_1:12663505-12663524 Msa0718420:intron 40.0%
GAAGTTTCCTCTACAGTAAC+CGG + chr5_1:12663527-12663546 None:intergenic 40.0%
GGATGAAAATGTGAAACCCA+AGG - chr5_1:12663607-12663626 Msa0718420:intron 40.0%
! AAACCCAAGGTTGTTTCAGA+AGG - chr5_1:12663620-12663639 Msa0718420:intron 40.0%
!! ACACCTTCTGAAACAACCTT+GGG + chr5_1:12663626-12663645 None:intergenic 40.0%
!! AACACCTTCTGAAACAACCT+TGG + chr5_1:12663627-12663646 None:intergenic 40.0%
TGTTCAAGATACCCTTCACA+CGG - chr5_1:12663658-12663677 Msa0718420:intron 40.0%
TGAAGATGCTTCTGATGTGA+AGG - chr5_1:12663727-12663746 Msa0718420:three_prime_UTR 40.0%
! AGTAACGGTGTTGAGAATGA+TGG - chr5_1:12663776-12663795 Msa0718420:three_prime_UTR 40.0%
!! TATTGAAATGATAGCGGTGG+AGG - chr5_1:12663832-12663851 Msa0718420:three_prime_UTR 40.0%
AGGTTCATTTGCATCAGAAG+AGG + chr5_1:12663957-12663976 None:intergenic 40.0%
CTCTGGACTAATGCTTTCTT+TGG - chr5_1:12664429-12664448 Msa0718420:intron 40.0%
TGGACTAATGCTTTCTTTGG+TGG - chr5_1:12664432-12664451 Msa0718420:intron 40.0%
GCTTTCTTTGGTGGAACATA+AGG - chr5_1:12664441-12664460 Msa0718420:intron 40.0%
!! TGGTTGATGGTTAAGCTTGT+CGG - chr5_1:12664613-12664632 Msa0718420:intron 40.0%
TCCCACTTCAGTATGTAAGA+AGG - chr5_1:12664822-12664841 Msa0718420:intron 40.0%
AAAGATTCCTGGGTGATGAA+GGG + chr5_1:12665018-12665037 None:intergenic 40.0%
AAAAGATTCCTGGGTGATGA+AGG + chr5_1:12665019-12665038 None:intergenic 40.0%
TGGCTACTTAAGGTATAGTG+TGG - chr5_1:12665094-12665113 Msa0718420:intron 40.0%
AGGTAACCTCATGTAAGTTG+TGG - chr5_1:12665306-12665325 Msa0718420:intron 40.0%
TAACCTCATGTAAGTTGTGG+CGG - chr5_1:12665309-12665328 Msa0718420:intron 40.0%
TCTTTCAAACCCCCAAAGTA+AGG - chr5_1:12665344-12665363 Msa0718420:intron 40.0%
CTAGTTACTCCTTACTTTGG+GGG + chr5_1:12665356-12665375 None:intergenic 40.0%
GCTAGTTACTCCTTACTTTG+GGG + chr5_1:12665357-12665376 None:intergenic 40.0%
GTGCTAGTTACTCCTTACTT+TGG + chr5_1:12665359-12665378 None:intergenic 40.0%
! TAACTCTAAGAGCTAGCTTG+TGG - chr5_1:12665534-12665553 Msa0718420:intron 40.0%
GACTGTGAAGTTTGCATGTT+TGG - chr5_1:12665642-12665661 Msa0718420:intron 40.0%
TTTGCATGTTTGGGCATTTG+CGG - chr5_1:12665652-12665671 Msa0718420:intron 40.0%
! AACTTCGAAAGCTAGCTCTT+AGG - chr5_1:12665738-12665757 Msa0718420:intron 40.0%
! ACTTCGAAAGCTAGCTCTTA+GGG - chr5_1:12665739-12665758 Msa0718420:intron 40.0%
! TTTCCGGGGATTTTATGAGA+AGG - chr5_1:12666148-12666167 Msa0718420:intron 40.0%
TCACCTTCTCATAAAATCCC+CGG + chr5_1:12666154-12666173 None:intergenic 40.0%
AACCTTAACATGTGCCCTAA+GGG + chr5_1:12666270-12666289 None:intergenic 40.0%
AAACCTTAACATGTGCCCTA+AGG + chr5_1:12666271-12666290 None:intergenic 40.0%
!! GAATCTTAACTTGTGCCCTT+AGG - chr5_1:12666383-12666402 Msa0718420:intron 40.0%
ACACCCACCTAAAAACACTA+AGG - chr5_1:12666446-12666465 Msa0718420:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG + chr5_1:12667165-12667184 None:intergenic 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG + chr5_1:12667164-12667183 None:intergenic 40.0%
!!! TTTTTTCCCTGGTTTTTCGG+CGG - chr5_1:12666578-12666597 Msa0718420:intron 40.0%
CTTGTATGTTCCAACGTCAT+TGG - chr5_1:12666663-12666682 Msa0718420:intron 40.0%
AGTTCAGTCGACATTCAATG+GGG + chr5_1:12666814-12666833 None:intergenic 40.0%
GTAGTTCAGTCGACATTCAA+TGG + chr5_1:12666816-12666835 None:intergenic 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG - chr5_1:12667164-12667183 Msa0718420:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG - chr5_1:12667165-12667184 Msa0718420:intron 40.0%
ACACCCACCTAAAAACACTA+AGG + chr5_1:12666446-12666465 None:intergenic 40.0%
ACAGGATTGCATCATTCTGA+AGG + chr5_1:12667340-12667359 None:intergenic 40.0%
! TTTTCAACATTCACAGGCTC+TGG + chr5_1:12667484-12667503 None:intergenic 40.0%
GCCTGTGAATGTTGAAAATC+AGG - chr5_1:12667486-12667505 Msa0718420:intron 40.0%
CCTCTGTCCTAAATTGTAAG+CGG + chr5_1:12668069-12668088 None:intergenic 40.0%
! CGCTTACAATTTAGGACAGA+GGG - chr5_1:12668067-12668086 Msa0718420:intron 40.0%
GGGAAGAAGAGCAAAAATTC+TGG + chr5_1:12668191-12668210 None:intergenic 40.0%
CTATTCGTAGTCTATGCGAT+AGG + chr5_1:12668402-12668421 None:intergenic 40.0%
CTATCGCATAGACTACGAAT+AGG + chr5_1:12668372-12668391 None:intergenic 40.0%
CTATTCGTAGTCTATGCGAT+AGG - chr5_1:12668402-12668421 Msa0718420:intron 40.0%
GTATAGTGCTCACAGCAATA+AGG + chr5_1:12668447-12668466 None:intergenic 40.0%
CGCTTCTGATTTCTTAGGAT+AGG - chr5_1:12668691-12668710 Msa0718420:CDS 40.0%
! TAAGATGGGCTCTTACGTTT+AGG + chr5_1:12668868-12668887 None:intergenic 40.0%
ACGTAAGAGCCCATCTTATA+TGG - chr5_1:12668870-12668889 Msa0718420:CDS 40.0%
ATAATGCAGTCAAAGCAGCA+CGG - chr5_1:12668893-12668912 Msa0718420:CDS 40.0%
! TGTCTTAACTGTGGTCTTGA+CGG + chr5_1:12668925-12668944 None:intergenic 40.0%
TCAAGACCACAGTTAAGACA+CGG - chr5_1:12668925-12668944 Msa0718420:CDS 40.0%
CATGCCTATGCTAACATATG+TGG - chr5_1:12669082-12669101 Msa0718420:CDS 40.0%
! ACTTTTACCCAATCAGCAGA+AGG + chr5_1:12669143-12669162 None:intergenic 40.0%
! TGAATTTTGCACACCTCCAA+TGG + chr5_1:12669440-12669459 None:intergenic 40.0%
! TTGGAGGTGTGCAAAATTCA+TGG - chr5_1:12669440-12669459 Msa0718420:CDS 40.0%
! CTCAGCATAGGACATTTTGA+AGG + chr5_1:12669666-12669685 None:intergenic 40.0%
CTTCAAAATGTCCTATGCTG+AGG - chr5_1:12669664-12669683 Msa0718420:intron 40.0%
!! TCTAGTTCTACTCAATGTGC+TGG + chr5_1:12669715-12669734 None:intergenic 40.0%
! CCGCATCAACAAGTTTTCAA+GGG + chr5_1:12669739-12669758 None:intergenic 40.0%
!! CCCTTGAAAACTTGTTGATG+CGG - chr5_1:12669736-12669755 Msa0718420:intron 40.0%
! ACCGCATCAACAAGTTTTCA+AGG + chr5_1:12669740-12669759 None:intergenic 40.0%
ACCAATAATTGGCATCAGAG+GGG + chr5_1:12669796-12669815 None:intergenic 40.0%
CACCAATAATTGGCATCAGA+GGG + chr5_1:12669797-12669816 None:intergenic 40.0%
CTCTGATGCCAATTATTGGT+GGG - chr5_1:12669796-12669815 Msa0718420:intron 40.0%
! AGCATAGCTCTATATGGACT+TGG + chr5_1:12669822-12669841 None:intergenic 40.0%
!! AGCTATGCTCTGGCTTTAAA+TGG - chr5_1:12669833-12669852 Msa0718420:intron 40.0%
CCAAGAACTGATTAATCCGA+GGG + chr5_1:12669888-12669907 None:intergenic 40.0%
TCCAAGAACTGATTAATCCG+AGG + chr5_1:12669889-12669908 None:intergenic 40.0%
GGATTAATCAGTTCTTGGAC+CGG - chr5_1:12669890-12669909 Msa0718420:intron 40.0%
!! GATGCCTACTTTTCTAAACC+AGG - chr5_1:12669943-12669962 Msa0718420:intron 40.0%
CGTACCTGGTTTAGAAAAGT+AGG + chr5_1:12669950-12669969 None:intergenic 40.0%
CAAGGATTATTGGGATGATC+AGG + chr5_1:12670016-12670035 None:intergenic 40.0%
CTGATCATCCCAATAATCCT+TGG - chr5_1:12670014-12670033 Msa0718420:intron 40.0%
GATCATCCCAATAATCCTTG+GGG - chr5_1:12670016-12670035 Msa0718420:intron 40.0%
CTGATGAGGATCAATTCTTG+AGG + chr5_1:12670192-12670211 None:intergenic 40.0%
TATACTTGTGGCCAGCTTAA+CGG + chr5_1:12670547-12670566 None:intergenic 40.0%
!! AAAGTGCCGCTCAAGTTGAA+GGG - chr5_1:12662718-12662737 Msa0718420:intron 45.0%
AATGGTAAGACCGGTGTGTT+AGG - chr5_1:12662756-12662775 Msa0718420:intron 45.0%
AGTTAAGCGTGTCAGAGATG+AGG - chr5_1:12662802-12662821 Msa0718420:intron 45.0%
!! GAGGATGTTGCTTTGAAGTG+TGG - chr5_1:12662821-12662840 Msa0718420:three_prime_UTR 45.0%
GACAACATTAGGGAGAGTTG+GGG - chr5_1:12662872-12662891 Msa0718420:three_prime_UTR 45.0%
GCATGTAGAGAGAAGACTTG+TGG - chr5_1:12662943-12662962 Msa0718420:intron 45.0%
AGAGAGTAGATCAGATGGAG+GGG - chr5_1:12662978-12662997 Msa0718420:intron 45.0%
TCCGGCGAATGTTAATGTAG+AGG - chr5_1:12663358-12663377 Msa0718420:intron 45.0%
AGTTCAACCGGTTACTGTAG+AGG - chr5_1:12663517-12663536 Msa0718420:intron 45.0%
AGATGCTTCTGATGTGAAGG+TGG - chr5_1:12663730-12663749 Msa0718420:three_prime_UTR 45.0%
TCAACACCGTTACTACTCAG+AGG + chr5_1:12663770-12663789 None:intergenic 45.0%
TCATTTGCATCAGAAGAGGC+AGG + chr5_1:12663953-12663972 None:intergenic 45.0%
GTATTAGAAGAGGCAGGTTG+TGG + chr5_1:12664010-12664029 None:intergenic 45.0%
!! TTCTGGCCTTGTATCATCAG+AGG + chr5_1:12664083-12664102 None:intergenic 45.0%
! GCCGCAGAACATGTTTTTCT+TGG - chr5_1:12664183-12664202 Msa0718420:intron 45.0%
AAATGAGTCGGGAACAGAAG+AGG - chr5_1:12664228-12664247 Msa0718420:intron 45.0%
! GGACCAAGCAGCTTTTATGA+AGG - chr5_1:12664249-12664268 Msa0718420:intron 45.0%
GCTCCTTCATAAAAGCTGCT+TGG + chr5_1:12664255-12664274 None:intergenic 45.0%
GGTTATGGAGAGCTGTAATG+AGG - chr5_1:12664462-12664481 Msa0718420:intron 45.0%
ATGGAGAGCTGTAATGAGGT+TGG - chr5_1:12664466-12664485 Msa0718420:intron 45.0%
TGGAGAGCTGTAATGAGGTT+GGG - chr5_1:12664467-12664486 Msa0718420:intron 45.0%
TGGGTGATGAAGGGAATATG+GGG + chr5_1:12665009-12665028 None:intergenic 45.0%
CTGGGTGATGAAGGGAATAT+GGG + chr5_1:12665010-12665029 None:intergenic 45.0%
CTTAAGGTATAGTGTGGCTG+TGG - chr5_1:12665100-12665119 Msa0718420:intron 45.0%
ATGTCCAGTCCTAGGCATAA+GGG + chr5_1:12665619-12665638 None:intergenic 45.0%
TTGCATGTTTGGGCATTTGC+GGG - chr5_1:12665653-12665672 Msa0718420:intron 45.0%
GAGTGGTAAGCGTTACACAT+TGG + chr5_1:12665805-12665824 None:intergenic 45.0%
ATAAAATCCCCGGAAAGTCC+AGG + chr5_1:12666144-12666163 None:intergenic 45.0%
! TTGTGCTAACTTGTGCCCTT+AGG - chr5_1:12666252-12666271 Msa0718420:intron 45.0%
! TGTGCTAACTTGTGCCCTTA+GGG - chr5_1:12666253-12666272 Msa0718420:intron 45.0%
GCATTTGCGAATTGCTTGAG+TGG - chr5_1:12667303-12667322 Msa0718420:intron 45.0%
AGGCCCTTCTTGATTACGAA+AGG - chr5_1:12667413-12667432 Msa0718420:intron 45.0%
!!! TTGCTTACATTTTGGGACGG+AGG + chr5_1:12667789-12667808 None:intergenic 45.0%
! CCGCTTACAATTTAGGACAG+AGG - chr5_1:12668066-12668085 Msa0718420:intron 45.0%
!! CTATGCGATAGGAGTACCAA+GGG + chr5_1:12668333-12668352 None:intergenic 45.0%
!! TCTATGCGATAGGAGTACCA+AGG + chr5_1:12668334-12668353 None:intergenic 45.0%
! TGTGTCTAGGGTTTAGCATC+AGG - chr5_1:12668502-12668521 Msa0718420:intron 45.0%
GTTTAGCATCAGGTAGATCC+CGG - chr5_1:12668512-12668531 Msa0718420:intron 45.0%
TCACAACGTCTTCTTGGCAA+TGG - chr5_1:12668571-12668590 Msa0718420:CDS 45.0%
CTTCTTGGCAATGGTGAAGT+TGG - chr5_1:12668580-12668599 Msa0718420:CDS 45.0%
!! GCAGCTTAAGAGCATCAGTA+TGG - chr5_1:12668743-12668762 Msa0718420:CDS 45.0%
GAGTAACCGTGTCTTAACTG+TGG + chr5_1:12668934-12668953 None:intergenic 45.0%
GCAGCCACATATGTTAGCAT+AGG + chr5_1:12669089-12669108 None:intergenic 45.0%
TGCTAACATATGTGGCTGCT+AGG - chr5_1:12669090-12669109 Msa0718420:CDS 45.0%
AACATATGTGGCTGCTAGGT+TGG - chr5_1:12669094-12669113 Msa0718420:CDS 45.0%
ACATATGTGGCTGCTAGGTT+GGG - chr5_1:12669095-12669114 Msa0718420:CDS 45.0%
ACATAGGACCTTCTGCTGAT+TGG - chr5_1:12669132-12669151 Msa0718420:CDS 45.0%
! CATAGGACCTTCTGCTGATT+GGG - chr5_1:12669133-12669152 Msa0718420:CDS 45.0%
! TTTAGTTCCTGGCCTTCTGA+GGG - chr5_1:12669287-12669306 Msa0718420:CDS 45.0%
AATGGCAACTCTCATGGGAA+GGG + chr5_1:12669422-12669441 None:intergenic 45.0%
GAGGTGTGCAAAATTCATGG+CGG - chr5_1:12669443-12669462 Msa0718420:CDS 45.0%
! TGCAAAATTCATGGCGGAGT+GGG - chr5_1:12669449-12669468 Msa0718420:CDS 45.0%
ATGACAGATACCCTCAGCAT+AGG + chr5_1:12669678-12669697 None:intergenic 45.0%
!! TGCTGAGGGTATCTGTCATT+AGG - chr5_1:12669679-12669698 Msa0718420:intron 45.0%
TGTTCTCCTCTCAAGGTCTT+AGG - chr5_1:12669764-12669783 Msa0718420:intron 45.0%
ATCGAACCTAAGACCTTGAG+AGG + chr5_1:12669773-12669792 None:intergenic 45.0%
TCCCCTCTGATGCCAATTAT+TGG - chr5_1:12669792-12669811 Msa0718420:intron 45.0%
CCACCAATAATTGGCATCAG+AGG + chr5_1:12669798-12669817 None:intergenic 45.0%
CCTCTGATGCCAATTATTGG+TGG - chr5_1:12669795-12669814 Msa0718420:intron 45.0%
GTCCATATAGAGCTATGCTC+TGG - chr5_1:12669823-12669842 Msa0718420:intron 45.0%
! AGCCAGAGCATAGCTCTATA+TGG + chr5_1:12669828-12669847 None:intergenic 45.0%
CCCTCGGATTAATCAGTTCT+TGG - chr5_1:12669885-12669904 Msa0718420:intron 45.0%
TTATGACCAAACGTCCTGCT+GGG + chr5_1:12669985-12670004 None:intergenic 45.0%
GTCACACCCCAAGGATTATT+GGG + chr5_1:12670025-12670044 None:intergenic 45.0%
TGTCACACCCCAAGGATTAT+TGG + chr5_1:12670026-12670045 None:intergenic 45.0%
GGGTGTGACACCTTTCAAAA+AGG - chr5_1:12670036-12670055 Msa0718420:intron 45.0%
!!! TTTATATCATTTTAAAATTT+TGG - chr5_1:12665701-12665720 Msa0718420:intron 5.0%
!!! TTTTTTTTTTTTTTATGATA+TGG - chr5_1:12665991-12666010 Msa0718420:intron 5.0%
!!! TTTTTTTTTTTTTATGATAT+GGG - chr5_1:12665992-12666011 Msa0718420:intron 5.0%
!! ATGTTATATATATATATATA+TGG - chr5_1:12666410-12666429 Msa0718420:intron 5.0%
!! TGTTATATATATATATATAT+GGG - chr5_1:12666411-12666430 Msa0718420:intron 5.0%
!! AAAATTAAAATATAAGAATT+TGG + chr5_1:12668021-12668040 None:intergenic 5.0%
GTAAAAGAACTGAGCGGGAG+AGG + chr5_1:12662270-12662289 None:intergenic 50.0%
AAGGGCGATCCTAAAGTGTG+AGG + chr5_1:12662457-12662476 None:intergenic 50.0%
!! GAAAGTGCCGCTCAAGTTGA+AGG - chr5_1:12662717-12662736 Msa0718420:intron 50.0%
AGAAAACGACGAAGTGGGTC+AGG - chr5_1:12663331-12663350 Msa0718420:intron 50.0%
GAAAACGACGAAGTGGGTCA+GGG - chr5_1:12663332-12663351 Msa0718420:intron 50.0%
CTCAACTGGAACCGTGTGAA+GGG + chr5_1:12663672-12663691 None:intergenic 50.0%
! GGCGGCTGATGCTCATATTT+TGG - chr5_1:12663691-12663710 Msa0718420:intron 50.0%
!! AATGATAGCGGTGGAGGTTG+AGG - chr5_1:12663838-12663857 Msa0718420:three_prime_UTR 50.0%
AACAGCCGCTTCACAGACTT+CGG + chr5_1:12663870-12663889 None:intergenic 50.0%
CGATCCTACTACACCACAAC+CGG - chr5_1:12664057-12664076 Msa0718420:intron 50.0%
AACCGGCCTCTGATGATACA+AGG - chr5_1:12664074-12664093 Msa0718420:intron 50.0%
ACATGTTCTGCGGCGAATCT+GGG + chr5_1:12664177-12664196 None:intergenic 50.0%
AACATGTTCTGCGGCGAATC+TGG + chr5_1:12664178-12664197 None:intergenic 50.0%
! CTTCTTTAGGGAGAGGAGCA+TGG - chr5_1:12664282-12664301 Msa0718420:CDS 50.0%
AGAGCTGTAATGAGGTTGGG+AGG - chr5_1:12664470-12664489 Msa0718420:intron 50.0%
TGATGAAGGGAATATGGGGC+AGG + chr5_1:12665005-12665024 None:intergenic 50.0%
CCTGGGTGATGAAGGGAATA+TGG + chr5_1:12665011-12665030 None:intergenic 50.0%
CCATATTCCCTTCATCACCC+AGG - chr5_1:12665008-12665027 Msa0718420:intron 50.0%
ACTCCGCCACAACTTACATG+AGG + chr5_1:12665315-12665334 None:intergenic 50.0%
! ATGTAAGTTGTGGCGGAGTG+TGG - chr5_1:12665316-12665335 Msa0718420:intron 50.0%
! TGTAAGTTGTGGCGGAGTGT+GGG - chr5_1:12665317-12665336 Msa0718420:intron 50.0%
GATGTCCAGTCCTAGGCATA+AGG + chr5_1:12665620-12665639 None:intergenic 50.0%
CAGTCTAGATGTCCAGTCCT+AGG + chr5_1:12665627-12665646 None:intergenic 50.0%
CCACAGTTTCCTGGACTTTC+CGG - chr5_1:12666132-12666151 Msa0718420:intron 50.0%
CACAGTTTCCTGGACTTTCC+GGG - chr5_1:12666133-12666152 Msa0718420:intron 50.0%
ACAGTTTCCTGGACTTTCCG+GGG - chr5_1:12666134-12666153 Msa0718420:intron 50.0%
TGCCCTTAGGGCACATGTTA+AGG - chr5_1:12666265-12666284 Msa0718420:intron 50.0%
! TCAACATTCACAGGCTCTGG+AGG + chr5_1:12667481-12667500 None:intergenic 50.0%
CTGTTCAGCAGCATATCTCC+GGG + chr5_1:12668533-12668552 None:intergenic 50.0%
CCTGTTCAGCAGCATATCTC+CGG + chr5_1:12668534-12668553 None:intergenic 50.0%
ATGCTGCTGAACAGGCTATG+CGG - chr5_1:12668539-12668558 Msa0718420:CDS 50.0%
TGGCACTCACAACGTCTTCT+TGG - chr5_1:12668565-12668584 Msa0718420:CDS 50.0%
GGAACAGCTGTGGTTGACAT+AGG - chr5_1:12669116-12669135 Msa0718420:CDS 50.0%
! CTTTAGTTCCTGGCCTTCTG+AGG - chr5_1:12669286-12669305 Msa0718420:CDS 50.0%
ATGGCAACTCTCATGGGAAG+GGG + chr5_1:12669421-12669440 None:intergenic 50.0%
CAATGGCAACTCTCATGGGA+AGG + chr5_1:12669423-12669442 None:intergenic 50.0%
CTTCCCATGAGAGTTGCCAT+TGG - chr5_1:12669421-12669440 Msa0718420:CDS 50.0%
CCTCCAATGGCAACTCTCAT+GGG + chr5_1:12669427-12669446 None:intergenic 50.0%
ACCTCCAATGGCAACTCTCA+TGG + chr5_1:12669428-12669447 None:intergenic 50.0%
! GTGCAAAATTCATGGCGGAG+TGG - chr5_1:12669448-12669467 Msa0718420:CDS 50.0%
! AAAATTCATGGCGGAGTGGG+TGG - chr5_1:12669452-12669471 Msa0718420:CDS 50.0%
! GGTGTTGTGTTCTCCTCTCA+AGG - chr5_1:12669757-12669776 Msa0718420:intron 50.0%
GGACTTGGCCCACCAATAAT+TGG + chr5_1:12669807-12669826 None:intergenic 50.0%
TTAAATGGCGCCCCCACAAA+TGG - chr5_1:12669848-12669867 Msa0718420:intron 50.0%
GGTCTGATTGAACACGTACC+TGG + chr5_1:12669964-12669983 None:intergenic 50.0%
CTTATGACCAAACGTCCTGC+TGG + chr5_1:12669986-12670005 None:intergenic 50.0%
GCAGGACGTTTGGTCATAAG+CGG - chr5_1:12669986-12670005 Msa0718420:intron 50.0%
!! TTGAAAGGTGTCACACCCCA+AGG + chr5_1:12670034-12670053 None:intergenic 50.0%
TCCTCATCAGACATCAGCTG+TGG - chr5_1:12670202-12670221 Msa0718420:intron 50.0%
ACCACAGCTGATGTCTGATG+AGG + chr5_1:12670206-12670225 None:intergenic 50.0%
GGTAAGACCGGTGTGTTAGG+TGG - chr5_1:12662759-12662778 Msa0718420:intron 55.0%
! GAAGGAAGAGGTGCATGCTG+AGG - chr5_1:12663586-12663605 Msa0718420:three_prime_UTR 55.0%
CCTCAACTGGAACCGTGTGA+AGG + chr5_1:12663673-12663692 None:intergenic 55.0%
CCTTCACACGGTTCCAGTTG+AGG - chr5_1:12663670-12663689 Msa0718420:intron 55.0%
TCACACGGTTCCAGTTGAGG+CGG - chr5_1:12663673-12663692 Msa0718420:intron 55.0%
GAAGCCCGAAGTCTGTGAAG+CGG - chr5_1:12663862-12663881 Msa0718420:three_prime_UTR 55.0%
ACAGCCGCTTCACAGACTTC+GGG + chr5_1:12663869-12663888 None:intergenic 55.0%
GAGGCAGGTTGTGGTGTAGT+AGG + chr5_1:12663938-12663957 None:intergenic 55.0%
GCATCAGAAGAGGCAGGTTG+TGG + chr5_1:12663947-12663966 None:intergenic 55.0%
GAGGCAGGTTGTGGTGTAGT+AGG + chr5_1:12663938-12663957 None:intergenic 55.0%
GTATCATCAGAGGCCGGTTG+TGG + chr5_1:12664073-12664092 None:intergenic 55.0%
! GGCCTTGTATCATCAGAGGC+CGG + chr5_1:12664079-12664098 None:intergenic 55.0%
GAGGTTGGGAGGCTATGAGA+AGG - chr5_1:12664481-12664500 Msa0718420:intron 55.0%
ACATCCCCTCCCTTATGCCT+AGG - chr5_1:12665607-12665626 Msa0718420:intron 55.0%
CAGTCCTAGGCATAAGGGAG+GGG + chr5_1:12665614-12665633 None:intergenic 55.0%
CCAGTCCTAGGCATAAGGGA+GGG + chr5_1:12665615-12665634 None:intergenic 55.0%
TCCAGTCCTAGGCATAAGGG+AGG + chr5_1:12665616-12665635 None:intergenic 55.0%
CATTTGCGGGTGTGACCCAA+CGG - chr5_1:12665666-12665685 Msa0718420:intron 55.0%
GGACATGCACCACAGTTTCC+TGG - chr5_1:12666123-12666142 Msa0718420:intron 55.0%
CCGGAAAGTCCAGGAAACTG+TGG + chr5_1:12666135-12666154 None:intergenic 55.0%
!! GAAGTGCCGCCGAAAAACCA+GGG + chr5_1:12666587-12666606 None:intergenic 55.0%
CCGGAGATATGCTGCTGAAC+AGG - chr5_1:12668531-12668550 Msa0718420:CDS 55.0%
TGCTGCTGAACAGGCTATGC+GGG - chr5_1:12668540-12668559 Msa0718420:CDS 55.0%
! TGCTAGGTTGGGAACAGCTG+TGG - chr5_1:12669106-12669125 Msa0718420:CDS 55.0%
GTAGTACCTCCTCCCTCAGA+AGG + chr5_1:12669302-12669321 None:intergenic 55.0%
CCCATGAGAGTTGCCATTGG+AGG - chr5_1:12669424-12669443 Msa0718420:CDS 55.0%
ATCCCACCGTCCATTTGTGG+GGG + chr5_1:12669861-12669880 None:intergenic 55.0%
GATCCCACCGTCCATTTGTG+GGG + chr5_1:12669862-12669881 None:intergenic 55.0%
CGATCCCACCGTCCATTTGT+GGG + chr5_1:12669863-12669882 None:intergenic 55.0%
CCACAAATGGACGGTGGGAT+CGG - chr5_1:12669861-12669880 Msa0718420:intron 55.0%
CGTGTTCAATCAGACCCAGC+AGG - chr5_1:12669968-12669987 Msa0718420:intron 55.0%
ATCAGACCCAGCAGGACGTT+TGG - chr5_1:12669976-12669995 Msa0718420:intron 55.0%
! TCAGCTGTGGTAACGCTGCA+TGG - chr5_1:12670215-12670234 Msa0718420:intron 55.0%
! GCGTCAAGCGCCGCGTTATT+TGG + chr5_1:12662294-12662313 None:intergenic 60.0%
! CGAAGTGGGTCAGGGTGTTC+CGG - chr5_1:12663340-12663359 Msa0718420:intron 60.0%
TGAGCATCAGCCGCCTCAAC+TGG + chr5_1:12663686-12663705 None:intergenic 60.0%
GAGGCCGGTTGTGGTGTAGT+AGG + chr5_1:12664064-12664083 None:intergenic 60.0%
CCCTCCCTTATGCCTAGGAC+TGG - chr5_1:12665612-12665631 Msa0718420:intron 60.0%
!! GGAAGTGCCGCCGAAAAACC+AGG + chr5_1:12666588-12666607 None:intergenic 60.0%
!! GGCTCTGGAGGAGATGTGAC+AGG + chr5_1:12667469-12667488 None:intergenic 60.0%
GCTGCTGAACAGGCTATGCG+GGG - chr5_1:12668541-12668560 Msa0718420:CDS 60.0%
CTGAACAGGCTATGCGGGGT+TGG - chr5_1:12668545-12668564 Msa0718420:CDS 60.0%
! AGTTCCTGGCCTTCTGAGGG+AGG - chr5_1:12669290-12669309 Msa0718420:CDS 60.0%
ATGGCGCCCCCACAAATGGA+CGG - chr5_1:12669852-12669871 Msa0718420:intron 60.0%
CCGATCCCACCGTCCATTTG+TGG + chr5_1:12669864-12669883 None:intergenic 60.0%
! TCCTGGCCTTCTGAGGGAGG+AGG - chr5_1:12669293-12669312 Msa0718420:CDS 65.0%
ACCTCCTCCCTCAGAAGGCC+AGG + chr5_1:12669297-12669316 None:intergenic 65.0%
CGCCCCCACAAATGGACGGT+GGG - chr5_1:12669856-12669875 Msa0718420:intron 65.0%
GCGCCCCCACAAATGGACGG+TGG - chr5_1:12669855-12669874 Msa0718420:intron 70.0%
GGACGGTGGGATCGGACCCT+CGG - chr5_1:12669869-12669888 Msa0718420:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 12662233 12670638 12662233 ID=Msa0718420;Name=Msa0718420
chr5_1 mRNA 12662233 12670638 12662233 ID=Msa0718420-mRNA-1;Parent=Msa0718420;Name=Msa0718420-mRNA-1;_AED=0.09;_eAED=0.09;_QI=297|0.90|0.91|1|0.81|0.75|12|845|503
chr5_1 exon 12662233 12662695 12662233 ID=Msa0718420-mRNA-1:exon:5159;Parent=Msa0718420-mRNA-1
chr5_1 exon 12662814 12662906 12662814 ID=Msa0718420-mRNA-1:exon:5158;Parent=Msa0718420-mRNA-1
chr5_1 exon 12663557 12663607 12663557 ID=Msa0718420-mRNA-1:exon:5157;Parent=Msa0718420-mRNA-1
chr5_1 exon 12663693 12664011 12663693 ID=Msa0718420-mRNA-1:exon:5156;Parent=Msa0718420-mRNA-1
chr5_1 exon 12664107 12664163 12664107 ID=Msa0718420-mRNA-1:exon:5155;Parent=Msa0718420-mRNA-1
chr5_1 exon 12664253 12664360 12664253 ID=Msa0718420-mRNA-1:exon:5154;Parent=Msa0718420-mRNA-1
chr5_1 exon 12665364 12665456 12665364 ID=Msa0718420-mRNA-1:exon:5153;Parent=Msa0718420-mRNA-1
chr5_1 exon 12666702 12666747 12666702 ID=Msa0718420-mRNA-1:exon:5152;Parent=Msa0718420-mRNA-1
chr5_1 exon 12667511 12667563 12667511 ID=Msa0718420-mRNA-1:exon:5151;Parent=Msa0718420-mRNA-1
chr5_1 exon 12668369 12668408 12668369 ID=Msa0718420-mRNA-1:exon:5150;Parent=Msa0718420-mRNA-1
chr5_1 exon 12668521 12669589 12668521 ID=Msa0718420-mRNA-1:exon:5149;Parent=Msa0718420-mRNA-1
chr5_1 exon 12670377 12670638 12670377 ID=Msa0718420-mRNA-1:exon:5148;Parent=Msa0718420-mRNA-1
chr5_1 five_prime_UTR 12670377 12670638 12670377 ID=Msa0718420-mRNA-1:five_prime_utr;Parent=Msa0718420-mRNA-1
chr5_1 five_prime_UTR 12669555 12669589 12669555 ID=Msa0718420-mRNA-1:five_prime_utr;Parent=Msa0718420-mRNA-1
chr5_1 CDS 12668521 12669554 12668521 ID=Msa0718420-mRNA-1:cds;Parent=Msa0718420-mRNA-1
chr5_1 CDS 12668369 12668408 12668369 ID=Msa0718420-mRNA-1:cds;Parent=Msa0718420-mRNA-1
chr5_1 CDS 12667511 12667563 12667511 ID=Msa0718420-mRNA-1:cds;Parent=Msa0718420-mRNA-1
chr5_1 CDS 12666702 12666747 12666702 ID=Msa0718420-mRNA-1:cds;Parent=Msa0718420-mRNA-1
chr5_1 CDS 12665364 12665456 12665364 ID=Msa0718420-mRNA-1:cds;Parent=Msa0718420-mRNA-1
chr5_1 CDS 12664253 12664360 12664253 ID=Msa0718420-mRNA-1:cds;Parent=Msa0718420-mRNA-1
chr5_1 CDS 12664107 12664163 12664107 ID=Msa0718420-mRNA-1:cds;Parent=Msa0718420-mRNA-1
chr5_1 CDS 12663931 12664011 12663931 ID=Msa0718420-mRNA-1:cds;Parent=Msa0718420-mRNA-1
chr5_1 three_prime_UTR 12663693 12663930 12663693 ID=Msa0718420-mRNA-1:three_prime_utr;Parent=Msa0718420-mRNA-1
chr5_1 three_prime_UTR 12663557 12663607 12663557 ID=Msa0718420-mRNA-1:three_prime_utr;Parent=Msa0718420-mRNA-1
chr5_1 three_prime_UTR 12662814 12662906 12662814 ID=Msa0718420-mRNA-1:three_prime_utr;Parent=Msa0718420-mRNA-1
chr5_1 three_prime_UTR 12662233 12662695 12662233 ID=Msa0718420-mRNA-1:three_prime_utr;Parent=Msa0718420-mRNA-1
Gene Sequence

>Msa0718420

ATGAGTGATACAAAAGAAAACGACGAAGTGGGTCAGGGTGTTCCGGCGAATGTTAATGTAGAGGAAGCTGACTATGTCATTGTTGAAAATGAAAATTCAAATCAAGCTTCAACTAGTCCACAATTAGGAGATGATGATGAGATGATTATTGATAATCTTGCTGGTTTGGATTCATATCTTGATCAAGAGATGCATCTTGAAGTTCAACCGGTTACTGTAGAGGAAACTTCAAAGAATGTTGAAAATGTGTCAAATGATGTTAAAATTGGGAAGGAAGAGGTGCATGCTGAGGATGAAAATGTGAAACCCAAGGTTGTTTCAGAAGGTGTTTCACAAGAAAATGTTCAAGATACCCTTCACACGGTTCCAGTTGAGGCGGCTGATGCTCATATTTTGGATACAGCTGAGGGTGAAGATGCTTCTGATGTGAAGGTGGACGCCAAAAAACTTCCTCTGAGTAGTAACGGTGTTGAGAATGATGGTATTGCATGTCAAAATAATGTTAGTGATGGTGATATTGAAATGATAGCGGTGGAGGTTGAGGTGAAGCCCGAAGTCTGTGAAGCGGCTGTTAGTAAAGCTTGTGAAGTTGAACCTATATCGTTGAGTAATAACAATCCTACTACACCACAACCTGCCTCTTCTGATGCAAATGAACCTATACTGTCAAATCATAATGATCCTACTACACCACAACCTGCCTCTTCTAATACAAATGAACCTATACTGTCAAATCATAACGATCCTACTACACCACAACCGGCCTCTGATGATACAAGGCCAGAAGTCAAGAATGTTTTAGAAGTTGAAAGTAAGGGTGGTGAAGAGCAAGTTGCTGAGCCTGTAGATAATGAAAACCCAGATTCGCCGCAGAACATGTTTTTCTTGGATGCTGATCATTATTATGACGGAAATGAGTCGGGAACAGAAGAGGACCAAGCAGCTTTTATGAAGGAGCTTGAAAACTTCTTTAGGGAGAGGAGCATGGACTTCAAACCTCCCAAATTTTATGGAGAATGGCTTAATTGCCTTAAGTTATGGAGAGCTGTAATGAGGTTGGGAGGCTATGAGAAGGTAACCTCATGTAAGTTGTGGCGGAGTGTGGGAGAGTCTTTCAAACCCCCAAAGACATGCACCACAGTTTCCTGGACTTTCCGGGGATTTTATGAGAAGGCCCTTCTTGATTACGAAAGGCATAACATAAAAGGCGGCGAGCTGAATGTACCTGTCACATCTCCTCCAGAGCCTGTGAATGTTGAAAATCAGGGTTTAGCATCAGGTAGATCCCGGAGATATGCTGCTGAACAGGCTATGCGGGGTTGGCACTCACAACGTCTTCTTGGCAATGGTGAAGTTGGTGACCCTATTATAAAGGATAGGAATGCTGTGTCTGTGCAAAAGCGTGAAAAGCAGCTTAAGAGCATCAGTATGATGTACCTAAACGTAAGAGCCCATCTTATATGGATAATGCAGTCAAAGCAGCACGGAGTAAACCGTCAAGACCACAGTTAA
Protein sequence

>Msa0718420

MSDTKENDEVGQGVPANVNVEEADYVIVENENSNQASTSPQLGDDDEMIIDNLAGLDSYLDQEMHLEVQPVTVEETSKNVENVSNDVKIGKEEVHAEDENVKPKVVSEGVSQENVQDTLHTVPVEAADAHILDTAEGEDASDVKVDAKKLPLSSNGVENDGIACQNNVSDGDIEMIAVEVEVKPEVCEAAVSKACEVEPISLSNNNPTTPQPASSDANEPILSNHNDPTTPQPASSNTNEPILSNHNDPTTPQPASDDTRPEVKNVLEVESKGGEEQVAEPVDNENPDSPQNMFFLDADHYYDGNESGTEEDQAAFMKELENFFRERSMDFKPPKFYGEWLNCLKLWRAVMRLGGYEKVTSCKLWRSVGESFKPPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPVTSPPEPVNVENQGLASGRSRRYAAEQAMRGWHSQRLLGNGEVGDPIIKDRNAVSVQKREKQLKSISMMYLNVRAHLIWIMQSKQHGVNRQDHS*