AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0801080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0801080 MtrunA17_Chr5g0407561 94.969 477 24 0 1 477 1 477 0.0 932
Msa0801080 MtrunA17_Chr3g0144341 51.899 237 88 2 247 478 32 247 1.10e-66 219
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0801080 AT2G17410.1 69.634 191 56 1 294 484 480 668 2.68e-85 280
Msa0801080 AT2G17410.3 69.634 191 56 1 294 484 480 668 2.68e-85 280
Msa0801080 AT2G17410.2 69.634 191 56 1 294 484 480 668 3.14e-85 279
Msa0801080 AT1G76510.2 57.865 178 69 2 305 477 137 313 4.81e-59 201
Msa0801080 AT1G76510.4 57.865 178 69 2 305 477 137 313 4.81e-59 201
Msa0801080 AT1G76510.1 57.865 178 69 2 305 477 137 313 4.81e-59 201
Msa0801080 AT1G20910.1 56.742 178 71 2 305 477 101 277 1.82e-57 196
Msa0801080 AT1G20910.2 56.742 178 71 2 305 477 101 277 2.72e-57 196
Msa0801080 AT1G76510.3 51.244 201 69 3 305 477 137 336 2.71e-53 187

Find 206 sgRNAs with CRISPR-Local

Find 607 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATCAGCGTATCCAATTT+AGG 0.103967 5_3:-14765746 Msa0801080:five_prime_UTR
AAGCCATTCTCCATAAAATT+TGG 0.109421 5_3:+14763852 None:intergenic
TACCTCTAAATTGTTGTTTC+AGG 0.131744 5_3:+14757825 None:intergenic
CAGATGCCAATTTATATCTT+AGG 0.171441 5_3:-14757784 Msa0801080:three_prime_UTR
CAATTTAGAGGTATTGTTTA+TGG 0.177672 5_3:-14757815 Msa0801080:three_prime_UTR
GGCGGCTGATGCTCATATTT+TGG 0.177729 5_3:-14764478 Msa0801080:CDS
CCACAGTTTCCTGGACTTTC+CGG 0.183968 5_3:-14762032 Msa0801080:CDS
ATACGCTGATAAGTTGAATT+TGG 0.192262 5_3:+14765756 None:intergenic
TTCCACCAAACCTTTATAAT+AGG 0.195321 5_3:+14759570 None:intergenic
GTACTATTATTTATATTTAT+AGG 0.196867 5_3:-14757857 Msa0801080:three_prime_UTR
AACCTCAAACAGCACAATTT+AGG 0.201766 5_3:-14765785 Msa0801080:five_prime_UTR
AACATGTTCTGCGGCGAATC+TGG 0.212068 5_3:+14763994 None:intergenic
GTGTCAAATGATGTTAAAAT+TGG 0.233662 5_3:-14764606 Msa0801080:CDS
AGGAGCTTGAAAACTTCTTT+AGG 0.247131 5_3:-14763900 Msa0801080:CDS
CAATCACAACACACGGTAAA+AGG 0.262180 5_3:+14759212 None:intergenic
TCTAAAACATTCTTGACTTC+TGG 0.270928 5_3:+14764072 None:intergenic
TTCTACCCTAAGATATAAAT+TGG 0.278397 5_3:+14757778 None:intergenic
ACCTCAAACAGCACAATTTA+GGG 0.290842 5_3:-14765784 Msa0801080:five_prime_UTR
GCGTCAAGCGCCGCGTTATT+TGG 0.293754 5_3:+14765877 None:intergenic
TGTCACACCCCAAGGATTAT+TGG 0.294912 5_3:+14758154 None:intergenic
CACAGTTTCCTGGACTTTCC+GGG 0.295395 5_3:-14762031 Msa0801080:CDS
GAAATATATGCTTTAGTTCC+TGG 0.296044 5_3:-14758901 Msa0801080:three_prime_UTR
TTATCAGCGTATCCAATTTA+GGG 0.296470 5_3:-14765745 Msa0801080:five_prime_UTR
ACGTAAGAGCCCATCTTATA+TGG 0.307472 5_3:-14759307 Msa0801080:CDS
CACTATTCTGACTGTTCAAA+TGG 0.310977 5_3:+14757920 None:intergenic
TACGAAAGGCATAACATAAA+AGG 0.323371 5_3:-14760750 Msa0801080:CDS
TAGAATATATATTTAATGTT+AGG 0.327948 5_3:-14757760 Msa0801080:three_prime_UTR
TGGCACTCACAACGTCTTCT+TGG 0.335482 5_3:-14759612 Msa0801080:CDS
TATTGATAATCTTGCTGGTT+TGG 0.335988 5_3:-14764706 Msa0801080:CDS
GGGTGTGACACCTTTCAAAA+AGG 0.336957 5_3:-14758141 Msa0801080:intron
TCCACCAAACCTTTATAATA+GGG 0.338104 5_3:+14759571 None:intergenic
GCCTGTGAATGTTGAAAATC+AGG 0.345539 5_3:-14760691 Msa0801080:intron
GAGGCAGGTTGTGGTGTAGT+AGG 0.349558 5_3:+14764234 None:intergenic
GGAGCTTGAAAACTTCTTTA+GGG 0.352045 5_3:-14763899 Msa0801080:CDS
AGCCATTCTCCATAAAATTT+GGG 0.353493 5_3:+14763853 None:intergenic
TAAGATGGGCTCTTACGTTT+AGG 0.359154 5_3:+14759312 None:intergenic
GGACATGCACCACAGTTTCC+TGG 0.366165 5_3:-14762041 Msa0801080:CDS
GAGGAGAGAAAACCCTAAAT+TGG 0.367657 5_3:+14765733 None:intergenic
ACCCTAAATTGTGCTGTTTG+AGG 0.368751 5_3:+14765783 None:intergenic
CATAGGACCTTCTGCTGATT+GGG 0.368858 5_3:-14759044 Msa0801080:three_prime_UTR
ACTTCTGGCCTTGTATCATC+AGG 0.373111 5_3:+14764087 None:intergenic
ACATAGGACCTTCTGCTGAT+TGG 0.380929 5_3:-14759045 Msa0801080:three_prime_UTR
ACCCTGAAACAACAATTTAG+AGG 0.382932 5_3:-14757827 Msa0801080:three_prime_UTR
TTGTTATTACTCAACGATAT+AGG 0.385173 5_3:+14764258 None:intergenic
CGAAGTGGGTCAGGGTGTTC+CGG 0.386279 5_3:-14764829 Msa0801080:CDS
TGAGCATCAGCCGCCTCAAC+TGG 0.386484 5_3:+14764486 None:intergenic
CTTATGACCAAACGTCCTGC+TGG 0.387571 5_3:+14758194 None:intergenic
GAAGTTTCCTCTACAGTAAC+CGG 0.388879 5_3:+14764645 None:intergenic
ATGATTATTGATAATCTTGC+TGG 0.390384 5_3:-14764711 Msa0801080:CDS
AGAAAACGACGAAGTGGGTC+AGG 0.392643 5_3:-14764838 Msa0801080:CDS
GCTTCAACTAGTCCACAATT+AGG 0.393303 5_3:-14764747 Msa0801080:CDS
TACTTGTTTGTGTAGTTAGA+AGG 0.394996 5_3:-14759187 Msa0801080:three_prime_UTR
CCGGAGATATGCTGCTGAAC+AGG 0.399445 5_3:-14759646 Msa0801080:CDS
AGTTGGTGACCCTATTATAA+AGG 0.400416 5_3:-14759580 Msa0801080:intron
CATGTTAATATGAGCTAGTA+AGG 0.400793 5_3:-14757709 Msa0801080:three_prime_UTR
TATACTTGTGGCCAGCTTAA+CGG 0.401447 5_3:+14757633 None:intergenic
TGCTGCTGAACAGGCTATGC+GGG 0.403913 5_3:-14759637 Msa0801080:CDS
GTCACACCCCAAGGATTATT+GGG 0.409667 5_3:+14758155 None:intergenic
ATCAGACCCAGCAGGACGTT+TGG 0.410529 5_3:-14758201 Msa0801080:three_prime_UTR
ACCTCTAAATTGTTGTTTCA+GGG 0.412735 5_3:+14757826 None:intergenic
GAGGCAGGTTGTGGTGTAGT+AGG 0.418578 5_3:+14764171 None:intergenic
ACTGCATTATCCATATAAGA+TGG 0.421547 5_3:+14759297 None:intergenic
TGATCATCCCAATAATCCTT+GGG 0.427480 5_3:-14758162 Msa0801080:three_prime_UTR
CGATCCTACTACACCACAAC+CGG 0.432499 5_3:-14764112 Msa0801080:CDS
AACATATGTGGCTGCTAGGT+TGG 0.437374 5_3:-14759083 Msa0801080:three_prime_UTR
GTATCATCAGGGGCCGGTTG+TGG 0.439443 5_3:+14764099 None:intergenic
CTGAACAGGCTATGCGGGGT+TGG 0.442024 5_3:-14759632 Msa0801080:CDS
CAAGGATTATTGGGATGATC+AGG 0.443990 5_3:+14758164 None:intergenic
TGTGTCTAGGGTTTAGCATC+AGG 0.444410 5_3:-14759675 Msa0801080:intron
ATGGAGAGCTGTAATGAGGT+TGG 0.446791 5_3:-14763703 Msa0801080:CDS
AGATGCCAATTTATATCTTA+GGG 0.447119 5_3:-14757783 Msa0801080:three_prime_UTR
CTGATCATCCCAATAATCCT+TGG 0.447173 5_3:-14758163 Msa0801080:three_prime_UTR
TCATTATGATTTGACAGTAT+AGG 0.447670 5_3:+14764195 None:intergenic
ACACCTTCTGAAACAACCTT+GGG 0.452686 5_3:+14764546 None:intergenic
CCTGTTCAGCAGCATATCTC+CGG 0.454295 5_3:+14759646 None:intergenic
TTCATTAGATTCCGTTAAGC+TGG 0.459911 5_3:-14757644 Msa0801080:three_prime_UTR
TGTCTTAACTGTGGTCTTGA+CGG 0.460731 5_3:+14759255 None:intergenic
CTTTAGTTCCTGGCCTTCTG+AGG 0.460964 5_3:-14758891 Msa0801080:three_prime_UTR
ACCTCCTCCCTCAGAAGGCC+AGG 0.463185 5_3:+14758883 None:intergenic
ACAGCCGCTTCACAGACTTC+AGG 0.465018 5_3:+14764303 None:intergenic
TGGAGAGCTGTAATGAGGTT+GGG 0.468118 5_3:-14763702 Msa0801080:CDS
TCGTTATGATTTGACAGTAT+AGG 0.469624 5_3:+14764132 None:intergenic
ACATATGTGGCTGCTAGGTT+GGG 0.470840 5_3:-14759082 Msa0801080:three_prime_UTR
TTGTGCTGTTTGAGGTTTGA+AGG 0.481385 5_3:+14765791 None:intergenic
ACATGTTCTGCGGCGAATCT+GGG 0.482417 5_3:+14763995 None:intergenic
AACACCTTCTGAAACAACCT+TGG 0.483020 5_3:+14764545 None:intergenic
GATGCATCTTGAAGTTCAAC+CGG 0.489348 5_3:-14764664 Msa0801080:CDS
GTATTAGAAGAGGCAGGTTG+TGG 0.491030 5_3:+14764162 None:intergenic
GCATCAGAAGAGGCAGGTTG+TGG 0.496341 5_3:+14764225 None:intergenic
GCAGCTTAAGAGCATCAGTA+TGG 0.497356 5_3:-14759434 Msa0801080:intron
AATCTCTCATGGCTATAAGT+TGG 0.497719 5_3:+14759152 None:intergenic
GGCCTTGTATCATCAGGGGC+CGG 0.499215 5_3:+14764093 None:intergenic
AATGATAGCGGTGGAGGTTG+AGG 0.504545 5_3:-14764331 Msa0801080:CDS
TGTCAAATGATGTTAAAATT+GGG 0.507836 5_3:-14764605 Msa0801080:CDS
TCCTCTACATTAACATTCGC+CGG 0.508778 5_3:+14764810 None:intergenic
TTGAAAACTTCTTTAGGGAG+AGG 0.509895 5_3:-14763894 Msa0801080:CDS
TATTATGACGGAAATGAGTC+GGG 0.512876 5_3:-14763952 Msa0801080:CDS
CCTTCAATCTCAATTTGCAC+AGG 0.513936 5_3:-14765695 Msa0801080:intron
CCTCAACTGGAACCGTATGA+AGG 0.517198 5_3:+14764499 None:intergenic
CTTCTGGCCTTGTATCATCA+GGG 0.519242 5_3:+14764088 None:intergenic
TCATTTGTATTAGAAGAGGC+AGG 0.520784 5_3:+14764156 None:intergenic
TTTAGTTCCTGGCCTTCTGA+GGG 0.521417 5_3:-14758890 Msa0801080:three_prime_UTR
TACAAAAGAAAACGACGAAG+TGG 0.521599 5_3:-14764844 Msa0801080:CDS
ATGTAAGTTGTGGCGGAGTG+TGG 0.521969 5_3:-14762853 Msa0801080:CDS
TCATTTGCATCAGAAGAGGC+AGG 0.525063 5_3:+14764219 None:intergenic
CCAAAGTACAAAATCTCTCA+TGG 0.526781 5_3:+14759141 None:intergenic
CTTCTTTAGGGAGAGGAGCA+TGG 0.528705 5_3:-14763887 Msa0801080:CDS
CATTGAGCACTTTATACTTG+TGG 0.529465 5_3:+14757621 None:intergenic
GATGCTGATCATTATTATGA+CGG 0.531097 5_3:-14763964 Msa0801080:CDS
TCCTGGCCTTCTGAGGGAGG+AGG 0.531182 5_3:-14758884 Msa0801080:intron
TTATTATGACGGAAATGAGT+CGG 0.531420 5_3:-14763953 Msa0801080:CDS
CATGCCTATGCTAACATATG+TGG 0.531856 5_3:-14759095 Msa0801080:three_prime_UTR
CTTCTTGGCAATGGTGAAGT+TGG 0.532211 5_3:-14759597 Msa0801080:CDS
AGTTCCTGGCCTTCTGAGGG+AGG 0.532344 5_3:-14758887 Msa0801080:three_prime_UTR
ATAAATATAAATAATAGTAC+AGG 0.532345 5_3:+14757860 None:intergenic
ACTATTCTGACTGTTCAAAT+GGG 0.533014 5_3:+14757921 None:intergenic
GGGGCCGGTTGTGGTGTAGT+AGG 0.535932 5_3:+14764108 None:intergenic
CTGTGCAAATTGAGATTGAA+GGG 0.538165 5_3:+14765696 None:intergenic
TTGAAAGGTGTCACACCCCA+AGG 0.539280 5_3:+14758146 None:intergenic
TATGCCTTTCGTAATCAAGA+AGG 0.542010 5_3:+14760760 None:intergenic
ATACGCTTCTTGTGGGAAGT+AGG 0.546206 5_3:+14757549 None:intergenic
CCTTCATACGGTTCCAGTTG+AGG 0.546294 5_3:-14764499 Msa0801080:CDS
AAACCCAAGGTTGTTTCAGA+AGG 0.546742 5_3:-14764549 Msa0801080:CDS
TGATGAGGATCAATTCTTGA+GGG 0.548659 5_3:+14757989 None:intergenic
TCACCTTCTCATAAAATCCC+CGG 0.551152 5_3:+14762013 None:intergenic
AACCGGCCCCTGATGATACA+AGG 0.553789 5_3:-14764095 Msa0801080:CDS
CTGCATTATCCATATAAGAT+GGG 0.554084 5_3:+14759298 None:intergenic
TCATCATCATCTCCTAATTG+TGG 0.554329 5_3:+14764735 None:intergenic
AGTTCAACCGGTTACTGTAG+AGG 0.554846 5_3:-14764652 Msa0801080:CDS
TGTTCAAGATACCCTTCATA+CGG 0.555526 5_3:-14764511 Msa0801080:CDS
ATTTGGAGTAAAAGAACTGA+GGG 0.556283 5_3:+14765894 None:intergenic
ACGGTAAAAGGAATATAGAA+AGG 0.558765 5_3:+14759224 None:intergenic
TTATGACCAAACGTCCTGCT+GGG 0.559265 5_3:+14758195 None:intergenic
CATTTGAACAGTCAGAATAG+TGG 0.560731 5_3:-14757919 Msa0801080:three_prime_UTR
ATAAAATCCCCGGAAAGTCC+AGG 0.561547 5_3:+14762023 None:intergenic
TGTTGAAATGATAGCGGTGG+AGG 0.562175 5_3:-14764337 Msa0801080:CDS
CCTGTGCAAATTGAGATTGA+AGG 0.568596 5_3:+14765695 None:intergenic
AGTAACGGTGTTGAGAATGA+TGG 0.568957 5_3:-14764393 Msa0801080:CDS
TGCTAGGTTGGGAACAGCTG+TGG 0.569777 5_3:-14759071 Msa0801080:three_prime_UTR
AGGCCCTTCTTGATTACGAA+AGG 0.570162 5_3:-14760764 Msa0801080:CDS
CTGTTCAGCAGCATATCTCC+GGG 0.570165 5_3:+14759647 None:intergenic
TCAACATTCACAGGCTCTGG+AGG 0.570563 5_3:+14760699 None:intergenic
GCTCCTTCATAAAAGCTGCT+TGG 0.572842 5_3:+14763917 None:intergenic
TTAGAAGTTGAAAGTAAGGG+TGG 0.573767 5_3:-14764054 Msa0801080:CDS
GGAACAGCTGTGGTTGACAT+AGG 0.574547 5_3:-14759061 Msa0801080:three_prime_UTR
TTGGAGTAAAAGAACTGAGG+GGG 0.575217 5_3:+14765896 None:intergenic
ACAGTTTCCTGGACTTTCCG+GGG 0.575226 5_3:-14762030 Msa0801080:CDS
GTAGTACCTCCTCCCTCAGA+AGG 0.576961 5_3:+14758878 None:intergenic
CTCAACTGGAACCGTATGAA+GGG 0.577282 5_3:+14764500 None:intergenic
TCAGCTGTGGTAACGCTGCA+TGG 0.579783 5_3:-14757962 Msa0801080:three_prime_UTR
GGCTCTGGAGGAGATGTGAC+AGG 0.581414 5_3:+14760711 None:intergenic
AGGTTCATTTGCATCAGAAG+AGG 0.583304 5_3:+14764215 None:intergenic
TGTTAAAATTGGGAAGGAAG+AGG 0.583384 5_3:-14764595 Msa0801080:CDS
AAACTTCCTCTGAGTAGTAA+CGG 0.584178 5_3:-14764408 Msa0801080:CDS
CATTCTCCATAAAATTTGGG+AGG 0.584904 5_3:+14763856 None:intergenic
GTTTAGCATCAGGTAGATCC+CGG 0.586774 5_3:-14759665 Msa0801080:CDS
ATGCCTTTCGTAATCAAGAA+GGG 0.591525 5_3:+14760761 None:intergenic
ACGCAAATTTCATGTTGAAG+CGG 0.593284 5_3:+14765827 None:intergenic
TTAGTTACTCCTTACTTTGG+GGG 0.593681 5_3:+14762816 None:intergenic
GCAGCCACATATGTTAGCAT+AGG 0.593708 5_3:+14759091 None:intergenic
TCACAACGTCTTCTTGGCAA+TGG 0.594276 5_3:-14759606 Msa0801080:CDS
AAATGAGTCGGGAACAGAAG+AGG 0.595188 5_3:-14763941 Msa0801080:CDS
GGTTATGGAGAGCTGTAATG+AGG 0.597735 5_3:-14763707 Msa0801080:CDS
AGGTTCATTTGTATTAGAAG+AGG 0.598877 5_3:+14764152 None:intergenic
TGCTAACATATGTGGCTGCT+AGG 0.601537 5_3:-14759087 Msa0801080:three_prime_UTR
CTGATGAGGATCAATTCTTG+AGG 0.604531 5_3:+14757988 None:intergenic
AAATGATGTTAAAATTGGGA+AGG 0.607157 5_3:-14764601 Msa0801080:CDS
AGGTAACCTCATGTAAGTTG+TGG 0.607979 5_3:-14762863 Msa0801080:CDS
CTTACTAGCTCATATTAACA+TGG 0.609933 5_3:+14757710 None:intergenic
TGTAAGTTGTGGCGGAGTGT+GGG 0.610524 5_3:-14762852 Msa0801080:CDS
TAACCTCATGTAAGTTGTGG+CGG 0.622380 5_3:-14762860 Msa0801080:CDS
GAGGTTGGGAGGCTATGAGA+AGG 0.627081 5_3:-14763688 Msa0801080:intron
TTCTGGCCTTGTATCATCAG+GGG 0.628379 5_3:+14764089 None:intergenic
CGTGTTCAATCAGACCCAGC+AGG 0.633668 5_3:-14758209 Msa0801080:three_prime_UTR
TATAAAATATGCATGATGGT+TGG 0.635367 5_3:-14757667 Msa0801080:three_prime_UTR
TCATACGGTTCCAGTTGAGG+CGG 0.635924 5_3:-14764496 Msa0801080:CDS
TGTCAAAATAATGTTAGTGA+TGG 0.638630 5_3:-14764363 Msa0801080:CDS
ATGCTGCTGAACAGGCTATG+CGG 0.643981 5_3:-14759638 Msa0801080:CDS
GCAGGACGTTTGGTCATAAG+CGG 0.645787 5_3:-14758191 Msa0801080:three_prime_UTR
ATGTTATAAAATATGCATGA+TGG 0.647166 5_3:-14757671 Msa0801080:three_prime_UTR
TATTTGGAGTAAAAGAACTG+AGG 0.647438 5_3:+14765893 None:intergenic
ACAAAAGAAAACGACGAAGT+GGG 0.649473 5_3:-14764843 Msa0801080:CDS
GAAAACGACGAAGTGGGTCA+GGG 0.651529 5_3:-14764837 Msa0801080:CDS
TGAAGATGCTTCTGATGTGA+AGG 0.653690 5_3:-14764442 Msa0801080:CDS
ACCACAGCTGATGTCTGATG+AGG 0.655388 5_3:+14757974 None:intergenic
TCCGGCGAATGTTAATGTAG+AGG 0.660878 5_3:-14764811 Msa0801080:CDS
AAGTAAGCAATCACAACACA+CGG 0.663004 5_3:+14759205 None:intergenic
TCCTCATCAGACATCAGCTG+TGG 0.666911 5_3:-14757975 Msa0801080:three_prime_UTR
GATCATCCCAATAATCCTTG+GGG 0.671661 5_3:-14758161 Msa0801080:three_prime_UTR
AGATGCTTCTGATGTGAAGG+TGG 0.677639 5_3:-14764439 Msa0801080:CDS
AAGGGCGATCCTAAAGTGTG+AGG 0.678196 5_3:+14765714 None:intergenic
GCTGCTGAACAGGCTATGCG+GGG 0.681802 5_3:-14759636 Msa0801080:CDS
AGAGCTGTAATGAGGTTGGG+AGG 0.685164 5_3:-14763699 Msa0801080:CDS
TGATGTTGAAATGATAGCGG+TGG 0.687218 5_3:-14764340 Msa0801080:CDS
CCGGAAAGTCCAGGAAACTG+TGG 0.687700 5_3:+14762032 None:intergenic
TCAACACCGTTACTACTCAG+AGG 0.690526 5_3:+14764402 None:intergenic
GGATGAAAATGTGAAACCCA+AGG 0.695062 5_3:-14764562 Msa0801080:CDS
GAAAGGCATAACATAAAAGG+CGG 0.700632 5_3:-14760747 Msa0801080:CDS
GAAGGAAGAGGTGCATGCTG+AGG 0.700761 5_3:-14764583 Msa0801080:CDS
ACTCCGCCACAACTTACATG+AGG 0.707054 5_3:+14762857 None:intergenic
GAGTAACCGTGTCTTAACTG+TGG 0.708661 5_3:+14759246 None:intergenic
TCAAGACCACAGTTAAGACA+CGG 0.711149 5_3:-14759252 Msa0801080:exon
TTTGGAGTAAAAGAACTGAG+GGG 0.713455 5_3:+14765895 None:intergenic
TGGTGATGTTGAAATGATAG+CGG 0.713851 5_3:-14764343 Msa0801080:CDS
ATAATGCAGTCAAAGCAGCA+CGG 0.717518 5_3:-14759284 Msa0801080:CDS
GAAGCCTGAAGTCTGTGAAG+CGG 0.725881 5_3:-14764307 Msa0801080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACAAAAAAAAACATAAAAA+TGG + chr5_3:14758543-14758562 None:intergenic 10.0%
!!! TTTTTTGTTAGATTAATAAA+TGG - chr5_3:14760362-14760381 Msa0801080:intron 10.0%
!! AAAAAAAAACAAATGAAAAT+TGG + chr5_3:14760763-14760782 None:intergenic 10.0%
!! ACATGTTATATATATATATA+TGG - chr5_3:14761740-14761759 Msa0801080:intron 10.0%
!! CATGTTATATATATATATAT+GGG - chr5_3:14761741-14761760 Msa0801080:intron 10.0%
!! ATGTTATATATATATATATG+GGG - chr5_3:14761742-14761761 Msa0801080:intron 10.0%
!!! TCAAATTAATTTTAAATTGA+AGG - chr5_3:14761854-14761873 Msa0801080:intron 10.0%
!!! CAAATTAATTTTAAATTGAA+GGG - chr5_3:14761855-14761874 Msa0801080:intron 10.0%
!!! TTTTTTAGTAAATAATTAGT+GGG - chr5_3:14762445-14762464 Msa0801080:intron 10.0%
!! TTAAAAAAACAAGATTAAAT+AGG + chr5_3:14763151-14763170 None:intergenic 10.0%
!!! ATAAATTTTAATTATGTTGA+AGG - chr5_3:14764103-14764122 Msa0801080:CDS 10.0%
!! AAAATAATTATGGTTTAAAA+AGG + chr5_3:14765392-14765411 None:intergenic 10.0%
!! ATAAATATAAATAATAGTAC+AGG + chr5_3:14765639-14765658 None:intergenic 10.0%
!! GTACTATTATTTATATTTAT+AGG - chr5_3:14765639-14765658 Msa0801080:intron 10.0%
!! TAGAATATATATTTAATGTT+AGG - chr5_3:14765736-14765755 Msa0801080:five_prime_UTR 10.0%
!! TTGAATTAATATAATGAAGT+TGG - chr5_3:14758581-14758600 Msa0801080:intron 15.0%
!!! ACAATTTTCTTTTAATTCTT+GGG - chr5_3:14760451-14760470 Msa0801080:intron 15.0%
!! AAATGAAAATTGGAAATATA+AGG + chr5_3:14760753-14760772 None:intergenic 15.0%
!! TAGAAATTACAAATATAGTT+TGG - chr5_3:14761560-14761579 Msa0801080:intron 15.0%
!! AGAAATTACAAATATAGTTT+GGG - chr5_3:14761561-14761580 Msa0801080:intron 15.0%
!! TGTTATATATATATATATGG+GGG - chr5_3:14761743-14761762 Msa0801080:intron 15.0%
!!! ATTAATTTGAATAGACAAAA+GGG + chr5_3:14761844-14761863 None:intergenic 15.0%
!!! AATTAATTTGAATAGACAAA+AGG + chr5_3:14761845-14761864 None:intergenic 15.0%
!!! TTGTTCAACTTAATTTTAAA+AGG + chr5_3:14762414-14762433 None:intergenic 15.0%
!!! CTTTTTTAGTAAATAATTAG+TGG - chr5_3:14762444-14762463 Msa0801080:intron 15.0%
!!! AATTTTGTTGGTATATTTAT+AGG - chr5_3:14763059-14763078 Msa0801080:intron 15.0%
!! CTTTCTTGAAATTAAATATA+AGG - chr5_3:14763471-14763490 Msa0801080:intron 15.0%
!! TGCAGTTAATAATAATATAT+GGG + chr5_3:14763535-14763554 None:intergenic 15.0%
!! ATGCAGTTAATAATAATATA+TGG + chr5_3:14763536-14763555 None:intergenic 15.0%
!! ATTTACTATGAATATTTACA+TGG + chr5_3:14764907-14764926 None:intergenic 15.0%
!! AAAGATTTATTATATAGACT+GGG + chr5_3:14764942-14764961 None:intergenic 15.0%
!! TAAAGATTTATTATATAGAC+TGG + chr5_3:14764943-14764962 None:intergenic 15.0%
!! AATAAATAATTTGATGAATC+AGG - chr5_3:14765473-14765492 Msa0801080:intron 15.0%
!! AATTAGAAATGACAACATTA+GGG - chr5_3:14758190-14758209 Msa0801080:three_prime_UTR 20.0%
!! AAAACATAAAAATGGAATCA+AGG + chr5_3:14758535-14758554 None:intergenic 20.0%
!! TTCAACATTCAAGAAAAAAT+TGG + chr5_3:14758566-14758585 None:intergenic 20.0%
!! TGTCAAATGATGTTAAAATT+GGG - chr5_3:14758891-14758910 Msa0801080:three_prime_UTR 20.0%
!! ATTTATGTCATATTCAAAGA+TGG + chr5_3:14759712-14759731 None:intergenic 20.0%
!! AAACATTCAACATAATAGAA+AGG + chr5_3:14759849-14759868 None:intergenic 20.0%
!! AAAACGATTAAATATTGTAG+AGG - chr5_3:14759897-14759916 Msa0801080:intron 20.0%
!! AGATAATTTAAACTCTTAGA+AGG - chr5_3:14760110-14760129 Msa0801080:intron 20.0%
!! CAAATACAATTCAAAATATG+TGG - chr5_3:14760209-14760228 Msa0801080:intron 20.0%
!! TCATGAGAATTTATGATAAT+TGG + chr5_3:14760257-14760276 None:intergenic 20.0%
!!! TAATGGTATTTGTTAATTAC+TGG - chr5_3:14760292-14760311 Msa0801080:intron 20.0%
!!! CACAATTTTCTTTTAATTCT+TGG - chr5_3:14760450-14760469 Msa0801080:intron 20.0%
!! TTATAGGTTATATACCTAAT+TGG - chr5_3:14760595-14760614 Msa0801080:intron 20.0%
!! GTTTCAAATTACAAGAATAA+CGG + chr5_3:14760911-14760930 None:intergenic 20.0%
!!! TTTTTTTTTTATGATATGGG+TGG - chr5_3:14761327-14761346 Msa0801080:intron 20.0%
!! ATATATTACTGAGAATAATC+AGG + chr5_3:14761405-14761424 None:intergenic 20.0%
!! AATGTCGAAATTCAAATAAA+AGG + chr5_3:14761540-14761559 None:intergenic 20.0%
!! CAATCTTGTGAAAAATAAAT+TGG - chr5_3:14761661-14761680 Msa0801080:intron 20.0%
!!! TGTTTTAGTAAAATACAAGT+CGG + chr5_3:14761821-14761840 None:intergenic 20.0%
!! AAAAAATTATGTCCATGTAT+TGG + chr5_3:14761895-14761914 None:intergenic 20.0%
!! ATAAATCAATTCTACAACAT+TGG + chr5_3:14762092-14762111 None:intergenic 20.0%
!!! ATTAAGTTGAATAATGACAA+AGG - chr5_3:14762197-14762216 Msa0801080:intron 20.0%
!!! TTAAGTTGAATAATGACAAA+GGG - chr5_3:14762198-14762217 Msa0801080:intron 20.0%
!!! CAACTTAATTTTAAAAGGAA+GGG + chr5_3:14762409-14762428 None:intergenic 20.0%
!!! TCAACTTAATTTTAAAAGGA+AGG + chr5_3:14762410-14762429 None:intergenic 20.0%
!!! ATTAAGTTGAACAATGATAA+AGG - chr5_3:14762420-14762439 Msa0801080:intron 20.0%
!!! TTAAGTTGAACAATGATAAA+GGG - chr5_3:14762421-14762440 Msa0801080:intron 20.0%
!! AACAAGAATATATATATAGG+GGG + chr5_3:14762523-14762542 None:intergenic 20.0%
!! CAACAAGAATATATATATAG+GGG + chr5_3:14762524-14762543 None:intergenic 20.0%
!! CCAACAAGAATATATATATA+GGG + chr5_3:14762525-14762544 None:intergenic 20.0%
!! ACCAACAAGAATATATATAT+AGG + chr5_3:14762526-14762545 None:intergenic 20.0%
!! GAACAATAATGATCTATATA+AGG - chr5_3:14762859-14762878 Msa0801080:CDS 20.0%
!!! GTTTTTTTTGCTTACATTTT+GGG + chr5_3:14763115-14763134 None:intergenic 20.0%
!!! AGTTTTTTTTGCTTACATTT+TGG + chr5_3:14763116-14763135 None:intergenic 20.0%
!!! GAATAAACAAAAGTTTTTCT+TGG + chr5_3:14763187-14763206 None:intergenic 20.0%
!! TTAATAATAATATATGGGTG+GGG + chr5_3:14763530-14763549 None:intergenic 20.0%
!! GTTAATAATAATATATGGGT+GGG + chr5_3:14763531-14763550 None:intergenic 20.0%
!! AGTTAATAATAATATATGGG+TGG + chr5_3:14763532-14763551 None:intergenic 20.0%
!! AAGAAAACAGAAAATGAAAA+AGG + chr5_3:14763970-14763989 None:intergenic 20.0%
!! AAAATTTATAGCACAAGAAA+TGG + chr5_3:14764092-14764111 None:intergenic 20.0%
!! AAGATTTATTATATAGACTG+GGG + chr5_3:14764941-14764960 None:intergenic 20.0%
!! ATAATTATGGTTTAAAAAGG+AGG + chr5_3:14765389-14765408 None:intergenic 20.0%
!! CAAGAACAACAAAATAATTA+TGG + chr5_3:14765402-14765421 None:intergenic 20.0%
!! ATGTTATAAAATATGCATGA+TGG - chr5_3:14765825-14765844 Msa0801080:five_prime_UTR 20.0%
!!! CGTCGTTTTTTTTGTTTTTT+GGG + chr5_3:14757564-14757583 None:intergenic 25.0%
!!! ACGTCGTTTTTTTTGTTTTT+TGG + chr5_3:14757565-14757584 None:intergenic 25.0%
!!! CAAAAGCACGTTTTTTTTTT+TGG - chr5_3:14757921-14757940 Msa0801080:three_prime_UTR 25.0%
!!! TTTTTTGGTTTAGTAAACCA+TGG - chr5_3:14757936-14757955 Msa0801080:three_prime_UTR 25.0%
! GAATTAGAAATGACAACATT+AGG - chr5_3:14758189-14758208 Msa0801080:three_prime_UTR 25.0%
! TATAAGAGAAACTAGTATGA+AGG - chr5_3:14758367-14758386 Msa0801080:intron 25.0%
!!! TAATATAATGAAGTTGGTGT+AGG - chr5_3:14758587-14758606 Msa0801080:intron 25.0%
!!! AATATAATGAAGTTGGTGTA+GGG - chr5_3:14758588-14758607 Msa0801080:intron 25.0%
!! ATGATTATTGATAATCTTGC+TGG - chr5_3:14758785-14758804 Msa0801080:intron 25.0%
! GTGTCAAATGATGTTAAAAT+TGG - chr5_3:14758890-14758909 Msa0801080:three_prime_UTR 25.0%
! AAATGATGTTAAAATTGGGA+AGG - chr5_3:14758895-14758914 Msa0801080:three_prime_UTR 25.0%
! TGTCAAAATAATGTTAGTGA+TGG - chr5_3:14759133-14759152 Msa0801080:three_prime_UTR 25.0%
!! TTGTTATTACTCAACGATAT+AGG + chr5_3:14759241-14759260 None:intergenic 25.0%
! TCATTATGATTTGACAGTAT+AGG + chr5_3:14759304-14759323 None:intergenic 25.0%
!!! TGTTTTAGAAGTTGAAAGTA+AGG - chr5_3:14759438-14759457 Msa0801080:CDS 25.0%
!!! GTTTTAGAAGTTGAAAGTAA+GGG - chr5_3:14759439-14759458 Msa0801080:CDS 25.0%
! TTCATTCAAATTTATGTAGC+TGG - chr5_3:14759867-14759886 Msa0801080:intron 25.0%
!! TCCATAGCGATTTTAAATAT+TGG - chr5_3:14759920-14759939 Msa0801080:intron 25.0%
!! ACCAATATTTAAAATCGCTA+TGG + chr5_3:14759924-14759943 None:intergenic 25.0%
!!! CGATTTTAAATATTGGTTGA+TGG - chr5_3:14759927-14759946 Msa0801080:intron 25.0%
! ACAACACACATATAAATATG+TGG - chr5_3:14760087-14760106 Msa0801080:intron 25.0%
! ATCATAAATTCTCATGACAA+TGG - chr5_3:14760260-14760279 Msa0801080:intron 25.0%
! ATCTAACAAAAAAGATTCCT+GGG + chr5_3:14760355-14760374 None:intergenic 25.0%
! AATCTAACAAAAAAGATTCC+TGG + chr5_3:14760356-14760375 None:intergenic 25.0%
! TTTGTAAATTTGGCTACTTA+AGG - chr5_3:14760411-14760430 Msa0801080:intron 25.0%
!!! AAGTTGTTTTCGTTGTTTAT+AGG - chr5_3:14760579-14760598 Msa0801080:intron 25.0%
! TTCAAAAATACAAGCCAATT+AGG + chr5_3:14760612-14760631 None:intergenic 25.0%
!!! ATTGGCTTGTATTTTTGAAT+AGG - chr5_3:14760613-14760632 Msa0801080:intron 25.0%
! GTTATTTGATGTCAAATTTG+TGG - chr5_3:14760794-14760813 Msa0801080:intron 25.0%
! ATCTTCTTAGAATGTTTGTT+TGG - chr5_3:14760832-14760851 Msa0801080:intron 25.0%
! TCTTCTTAGAATGTTTGTTT+GGG - chr5_3:14760833-14760852 Msa0801080:intron 25.0%
!! ATATGGTCTTAACAAAAAGT+GGG + chr5_3:14761105-14761124 None:intergenic 25.0%
! TTTATCCAAAAAGCTCAAAA+AGG + chr5_3:14761382-14761401 None:intergenic 25.0%
! GTTTAGTAATTACCAATACA+TGG - chr5_3:14761880-14761899 Msa0801080:intron 25.0%
!!! TAATTTTTTCCCTGGTTTTT+CGG - chr5_3:14761906-14761925 Msa0801080:intron 25.0%
! AGACAAATCAACATCTATAA+CGG + chr5_3:14761940-14761959 None:intergenic 25.0%
!! GTTGTAGAATTGATTTATGA+TGG - chr5_3:14762094-14762113 Msa0801080:intron 25.0%
!! TAAGTTGAATAATGACAAAG+GGG - chr5_3:14762199-14762218 Msa0801080:intron 25.0%
!! TTTTTCTTCCTGATAAAAAC+AGG + chr5_3:14762279-14762298 None:intergenic 25.0%
!! TTCTTTTCTCGTAAAAACAA+AGG + chr5_3:14762317-14762336 None:intergenic 25.0%
! CCCTATATATATATTCTTGT+TGG - chr5_3:14762522-14762541 Msa0801080:intron 25.0%
! CAATGAAACAAGTGTTAAAA+AGG + chr5_3:14762690-14762709 None:intergenic 25.0%
!! ATGTGATCTGTATTTGATTT+CGG - chr5_3:14762830-14762849 Msa0801080:intron 25.0%
! CTTATAATCAAGATTGTGTT+GGG - chr5_3:14762949-14762968 Msa0801080:intron 25.0%
!! AAGTTTTTCTTGGAAAAGAT+GGG + chr5_3:14763177-14763196 None:intergenic 25.0%
!! AAAGTTTTTCTTGGAAAAGA+TGG + chr5_3:14763178-14763197 None:intergenic 25.0%
!!! TTTTCATTGGCTATTGATTA+TGG + chr5_3:14763261-14763280 None:intergenic 25.0%
!! GATGTAAAAGCAATTTTCAT+TGG + chr5_3:14763274-14763293 None:intergenic 25.0%
!!! ATTTTTTCCGCTTACAATTT+AGG - chr5_3:14763378-14763397 Msa0801080:intron 25.0%
!!! AATTTCAAGAAAGCATTAAC+CGG + chr5_3:14763464-14763483 None:intergenic 25.0%
! TGAAATTGGTTATTGCAATT+AGG - chr5_3:14763616-14763635 Msa0801080:intron 25.0%
! ATACTGAGAATAATCTAACA+TGG + chr5_3:14764134-14764153 None:intergenic 25.0%
! TTACATAATAGTCTACAAAC+AGG + chr5_3:14764827-14764846 None:intergenic 25.0%
! TTATATTGCTCAAGAATGAA+GGG + chr5_3:14764855-14764874 None:intergenic 25.0%
! TTTATATTGCTCAAGAATGA+AGG + chr5_3:14764856-14764875 None:intergenic 25.0%
!!! TTTGTTGTTCTTGAATACAA+TGG - chr5_3:14765409-14765428 Msa0801080:intron 25.0%
!!! CAATTTAGAGGTATTGTTTA+TGG - chr5_3:14765681-14765700 Msa0801080:intron 25.0%
! AGATGCCAATTTATATCTTA+GGG - chr5_3:14765713-14765732 Msa0801080:five_prime_UTR 25.0%
! TTCTACCCTAAGATATAAAT+TGG + chr5_3:14765721-14765740 None:intergenic 25.0%
! TATAAAATATGCATGATGGT+TGG - chr5_3:14765829-14765848 Msa0801080:five_prime_UTR 25.0%
! ATTTGGAGTAAAAGAACTGA+GGG + chr5_3:14757605-14757624 None:intergenic 30.0%
! TATTTGGAGTAAAAGAACTG+AGG + chr5_3:14757606-14757625 None:intergenic 30.0%
! TTCTTTTACTCCAAATAACG+CGG - chr5_3:14757609-14757628 Msa0801080:three_prime_UTR 30.0%
! ATACGCTGATAAGTTGAATT+TGG + chr5_3:14757743-14757762 None:intergenic 30.0%
TTATCAGCGTATCCAATTTA+GGG - chr5_3:14757751-14757770 Msa0801080:three_prime_UTR 30.0%
!! TCTCAAAACATTGATTTGCA+TGG + chr5_3:14757890-14757909 None:intergenic 30.0%
TTGTCCTATAAGTAGATTAC+TGG - chr5_3:14757959-14757978 Msa0801080:three_prime_UTR 30.0%
! TATAAGTAGATTACTGGCTA+GGG - chr5_3:14757965-14757984 Msa0801080:three_prime_UTR 30.0%
AGGGTTTAGTATTATTAGCA+AGG - chr5_3:14757984-14758003 Msa0801080:three_prime_UTR 30.0%
! GGGAAAATTTTATCGATCAA+TGG - chr5_3:14758066-14758085 Msa0801080:intron 30.0%
!! ATATAATGAAGTTGGTGTAG+GGG - chr5_3:14758589-14758608 Msa0801080:intron 30.0%
! TATTGATAATCTTGCTGGTT+TGG - chr5_3:14758790-14758809 Msa0801080:intron 30.0%
AGGTTCATTTGTATTAGAAG+AGG + chr5_3:14759347-14759366 None:intergenic 30.0%
TCGTTATGATTTGACAGTAT+AGG + chr5_3:14759367-14759386 None:intergenic 30.0%
! TCTAAAACATTCTTGACTTC+TGG + chr5_3:14759427-14759446 None:intergenic 30.0%
GATGCTGATCATTATTATGA+CGG - chr5_3:14759532-14759551 Msa0801080:intron 30.0%
! TTATTATGACGGAAATGAGT+CGG - chr5_3:14759543-14759562 Msa0801080:intron 30.0%
! TTCAAACCTCCCAAATTTTA+TGG - chr5_3:14759634-14759653 Msa0801080:CDS 30.0%
AGCCATTCTCCATAAAATTT+GGG + chr5_3:14759646-14759665 None:intergenic 30.0%
AAGCCATTCTCCATAAAATT+TGG + chr5_3:14759647-14759666 None:intergenic 30.0%
CAACATAGATAACTCACTTA+AGG + chr5_3:14759675-14759694 None:intergenic 30.0%
!! ATTCTAAAATATTGTCGCTC+TGG - chr5_3:14759739-14759758 Msa0801080:intron 30.0%
!! CAAATTTATGTAGCTGGTTT+TGG - chr5_3:14759873-14759892 Msa0801080:intron 30.0%
TTAGACGTGCAAGTAAAATA+TGG - chr5_3:14760047-14760066 Msa0801080:intron 30.0%
! GGTATTTGTTAATTACTGGA+AGG - chr5_3:14760296-14760315 Msa0801080:intron 30.0%
CACCTAACAGTTTGTAAATT+TGG - chr5_3:14760401-14760420 Msa0801080:intron 30.0%
AGCCAAATTTACAAACTGTT+AGG + chr5_3:14760406-14760425 None:intergenic 30.0%
TGTTAGTTACTCCTTACTTT+GGG + chr5_3:14760685-14760704 None:intergenic 30.0%
TCATGTCTTGATCTTGTTAA+TGG - chr5_3:14760708-14760727 Msa0801080:CDS 30.0%
! TATGGTCTTAACAAAAAGTG+GGG + chr5_3:14761104-14761123 None:intergenic 30.0%
! GATATGGTCTTAACAAAAAG+TGG + chr5_3:14761106-14761125 None:intergenic 30.0%
TTCCACATTGGATATTGATA+TGG + chr5_3:14761122-14761141 None:intergenic 30.0%
TGCAATGTTGTAAAAAAGAG+TGG + chr5_3:14761151-14761170 None:intergenic 30.0%
! ATTGCAATGATAGTGTGTAT+TGG - chr5_3:14761165-14761184 Msa0801080:intron 30.0%
! AATGATAGTGTGTATTGGAA+AGG - chr5_3:14761170-14761189 Msa0801080:intron 30.0%
TAAATGGAAAAAGCTGTGAT+GGG - chr5_3:14761225-14761244 Msa0801080:intron 30.0%
CGATGCATAATTTCTATCTT+TGG - chr5_3:14761693-14761712 Msa0801080:intron 30.0%
ATATATAACATGTGCCCTAA+GGG + chr5_3:14761733-14761752 None:intergenic 30.0%
TATATATAACATGTGCCCTA+AGG + chr5_3:14761734-14761753 None:intergenic 30.0%
AAACAAAAAACCAATGACGT+TGG + chr5_3:14762007-14762026 None:intergenic 30.0%
! GTAGAATTGATTTATGATGG+TGG - chr5_3:14762097-14762116 Msa0801080:intron 30.0%
TTTCTCGTAAAAACAAAGGT+TGG + chr5_3:14762313-14762332 None:intergenic 30.0%
TACGAGAAAAGAAAAACATG+AGG - chr5_3:14762324-14762343 Msa0801080:intron 30.0%
GTTGCTAACAAAACAAATGT+CGG + chr5_3:14762356-14762375 None:intergenic 30.0%
!!! GACATTTGTTTTGTTAGCAA+CGG - chr5_3:14762355-14762374 Msa0801080:intron 30.0%
AAACAAGTGTTAAAAAGGTG+AGG + chr5_3:14762685-14762704 None:intergenic 30.0%
! TACGAAAGGCATAACATAAA+AGG - chr5_3:14762746-14762765 Msa0801080:intron 30.0%
ACATTCAGTTAATAAGATCG+TGG + chr5_3:14762898-14762917 None:intergenic 30.0%
GCTTATAATCAAGATTGTGT+TGG - chr5_3:14762948-14762967 Msa0801080:intron 30.0%
TCTGTCAAAATCATTTGTTC+TGG - chr5_3:14763028-14763047 Msa0801080:intron 30.0%
! CTGGTTTAAGAGAATTTTGT+TGG - chr5_3:14763047-14763066 Msa0801080:intron 30.0%
!! TTTTTGCTTACATTTTGGGA+CGG + chr5_3:14763111-14763130 None:intergenic 30.0%
! GCTATTGATTATGGAGAAAA+TGG + chr5_3:14763252-14763271 None:intergenic 30.0%
! CAAGTAGCATTCATATTTTC+CGG - chr5_3:14763442-14763461 Msa0801080:intron 30.0%
! ATTAACTGCATTCGAGTTTA+AGG - chr5_3:14763545-14763564 Msa0801080:intron 30.0%
! AGTTTAAGGCATCATTATCT+GGG - chr5_3:14763559-14763578 Msa0801080:intron 30.0%
! GCTTGAACAATATCTGAAAT+TGG - chr5_3:14763602-14763621 Msa0801080:intron 30.0%
! TTCAATTGATGATTGTGTCT+AGG - chr5_3:14763808-14763827 Msa0801080:intron 30.0%
! TCAATTGATGATTGTGTCTA+GGG - chr5_3:14763809-14763828 Msa0801080:intron 30.0%
TCCACCAAACCTTTATAATA+GGG + chr5_3:14763928-14763947 None:intergenic 30.0%
TTCCACCAAACCTTTATAAT+AGG + chr5_3:14763929-14763948 None:intergenic 30.0%
ATTTATAGCACAAGAAATGG+AGG + chr5_3:14764089-14764108 None:intergenic 30.0%
TAGGTACATCTGATTCAATA+AGG + chr5_3:14764168-14764187 None:intergenic 30.0%
CTGCATTATCCATATAAGAT+GGG + chr5_3:14764201-14764220 None:intergenic 30.0%
ACTGCATTATCCATATAAGA+TGG + chr5_3:14764202-14764221 None:intergenic 30.0%
ACGGTAAAAGGAATATAGAA+AGG + chr5_3:14764275-14764294 None:intergenic 30.0%
TACTTGTTTGTGTAGTTAGA+AGG - chr5_3:14764309-14764328 Msa0801080:CDS 30.0%
! GAAATATATGCTTTAGTTCC+TGG - chr5_3:14764595-14764614 Msa0801080:CDS 30.0%
GGAAAATTCAGCTTATACAA+AGG - chr5_3:14764792-14764811 Msa0801080:CDS 30.0%
TATATTGCTCAAGAATGAAG+GGG + chr5_3:14764854-14764873 None:intergenic 30.0%
TTTCAGCATTGTAACTTATC+CGG + chr5_3:14765231-14765250 None:intergenic 30.0%
AAGTTACAATGCTGAAATTG+AGG - chr5_3:14765234-14765253 Msa0801080:intron 30.0%
GAATACAATGGCAAATTACT+TGG - chr5_3:14765421-14765440 Msa0801080:intron 30.0%
ACTATTCTGACTGTTCAAAT+GGG + chr5_3:14765578-14765597 None:intergenic 30.0%
!! ACCTCTAAATTGTTGTTTCA+GGG + chr5_3:14765673-14765692 None:intergenic 30.0%
!! TACCTCTAAATTGTTGTTTC+AGG + chr5_3:14765674-14765693 None:intergenic 30.0%
CAGATGCCAATTTATATCTT+AGG - chr5_3:14765712-14765731 Msa0801080:five_prime_UTR 30.0%
CTTACTAGCTCATATTAACA+TGG + chr5_3:14765789-14765808 None:intergenic 30.0%
CATGTTAATATGAGCTAGTA+AGG - chr5_3:14765787-14765806 Msa0801080:five_prime_UTR 30.0%
! TTTGGAGTAAAAGAACTGAG+GGG + chr5_3:14757604-14757623 None:intergenic 35.0%
ACGCAAATTTCATGTTGAAG+CGG + chr5_3:14757672-14757691 None:intergenic 35.0%
AACCTCAAACAGCACAATTT+AGG - chr5_3:14757711-14757730 Msa0801080:three_prime_UTR 35.0%
ACCTCAAACAGCACAATTTA+GGG - chr5_3:14757712-14757731 Msa0801080:three_prime_UTR 35.0%
CTTATCAGCGTATCCAATTT+AGG - chr5_3:14757750-14757769 Msa0801080:three_prime_UTR 35.0%
CTGTGCAAATTGAGATTGAA+GGG + chr5_3:14757803-14757822 None:intergenic 35.0%
ATCTACTTATAGGACAACCA+TGG + chr5_3:14757956-14757975 None:intergenic 35.0%
CTAGCCAGTAATCTACTTAT+AGG + chr5_3:14757966-14757985 None:intergenic 35.0%
! CTATAAGTAGATTACTGGCT+AGG - chr5_3:14757964-14757983 Msa0801080:three_prime_UTR 35.0%
! AATTTTCCCTTCAACTTGAG+CGG + chr5_3:14758055-14758074 None:intergenic 35.0%
TTATCGATCAATGGTAAGAC+CGG - chr5_3:14758075-14758094 Msa0801080:intron 35.0%
ATCACCTAGAGTAGAAAAGA+TGG - chr5_3:14758224-14758243 Msa0801080:intron 35.0%
! TCTACCATCTTTTCTACTCT+AGG + chr5_3:14758231-14758250 None:intergenic 35.0%
AGTAAAGAGAGTAGATCAGA+TGG - chr5_3:14758301-14758320 Msa0801080:intron 35.0%
GAGTCAAATCACTAGAGATA+GGG - chr5_3:14758328-14758347 Msa0801080:intron 35.0%
GGATCTAGAGATTAATGAGT+TGG - chr5_3:14758388-14758407 Msa0801080:intron 35.0%
! TAATGAGTTGGAGAAAGACA+TGG - chr5_3:14758400-14758419 Msa0801080:intron 35.0%
! GAGAAAGACATGGTTTTTGT+TGG - chr5_3:14758410-14758429 Msa0801080:intron 35.0%
! AAGCCTTATCACAATAAGTG+GGG + chr5_3:14758469-14758488 None:intergenic 35.0%
! CAAGCCTTATCACAATAAGT+GGG + chr5_3:14758470-14758489 None:intergenic 35.0%
!! TATAATGAAGTTGGTGTAGG+GGG - chr5_3:14758590-14758609 Msa0801080:intron 35.0%
TACAAAAGAAAACGACGAAG+TGG - chr5_3:14758652-14758671 Msa0801080:intron 35.0%
ACAAAAGAAAACGACGAAGT+GGG - chr5_3:14758653-14758672 Msa0801080:intron 35.0%
TCATCATCATCTCCTAATTG+TGG + chr5_3:14758764-14758783 None:intergenic 35.0%
TGTTAAAATTGGGAAGGAAG+AGG - chr5_3:14758901-14758920 Msa0801080:three_prime_UTR 35.0%
TGTTCAAGATACCCTTCATA+CGG - chr5_3:14758985-14759004 Msa0801080:intron 35.0%
!! TCATATTTTGGATACAGCTG+AGG - chr5_3:14759030-14759049 Msa0801080:three_prime_UTR 35.0%
!! CATATTTTGGATACAGCTGA+GGG - chr5_3:14759031-14759050 Msa0801080:three_prime_UTR 35.0%
!!! ACTACTCAGAGGAAGTTTTT+TGG + chr5_3:14759086-14759105 None:intergenic 35.0%
AAACTTCCTCTGAGTAGTAA+CGG - chr5_3:14759088-14759107 Msa0801080:three_prime_UTR 35.0%
! TGGTGATGTTGAAATGATAG+CGG - chr5_3:14759153-14759172 Msa0801080:three_prime_UTR 35.0%
TCATTTGTATTAGAAGAGGC+AGG + chr5_3:14759343-14759362 None:intergenic 35.0%
TTAGAAGTTGAAAGTAAGGG+TGG - chr5_3:14759442-14759461 Msa0801080:CDS 35.0%
! TCTGGGTTTTCATTATCTAC+AGG + chr5_3:14759487-14759506 None:intergenic 35.0%
TCCAAGAAAAACATGTTCTG+CGG + chr5_3:14759514-14759533 None:intergenic 35.0%
! TATTATGACGGAAATGAGTC+GGG - chr5_3:14759544-14759563 Msa0801080:intron 35.0%
AGGAGCTTGAAAACTTCTTT+AGG - chr5_3:14759596-14759615 Msa0801080:CDS 35.0%
GGAGCTTGAAAACTTCTTTA+GGG - chr5_3:14759597-14759616 Msa0801080:CDS 35.0%
! TTGAAAACTTCTTTAGGGAG+AGG - chr5_3:14759602-14759621 Msa0801080:CDS 35.0%
CATTCTCCATAAAATTTGGG+AGG + chr5_3:14759643-14759662 None:intergenic 35.0%
! CTCCCAAATTTTATGGAGAA+TGG - chr5_3:14759641-14759660 Msa0801080:CDS 35.0%
TTTGGTGGAACATAAGGTTA+TGG - chr5_3:14759774-14759793 Msa0801080:intron 35.0%
!!! CGTCTTTTTTGTCACTCTTA+TGG - chr5_3:14759995-14760014 Msa0801080:intron 35.0%
ACCTTCTTACATACTGAAGT+GGG + chr5_3:14760153-14760172 None:intergenic 35.0%
TACCTTCTTACATACTGAAG+TGG + chr5_3:14760154-14760173 None:intergenic 35.0%
! TTCACAATGCACTAGCATTT+TGG + chr5_3:14760187-14760206 None:intergenic 35.0%
GACAATGGCATTCAAGATAA+TGG - chr5_3:14760275-14760294 Msa0801080:intron 35.0%
TTAGGTGCATCAAAATCAAC+TGG + chr5_3:14760388-14760407 None:intergenic 35.0%
CTTTAGATGAGCGAAATTTG+AGG - chr5_3:14760489-14760508 Msa0801080:intron 35.0%
! ATTTGAGGCATTCTTTCTTG+AGG - chr5_3:14760504-14760523 Msa0801080:intron 35.0%
!! AGCACTGATGATAGAACTTT+AGG - chr5_3:14760533-14760552 Msa0801080:intron 35.0%
TTAGTTACTCCTTACTTTGG+GGG + chr5_3:14760683-14760702 None:intergenic 35.0%
GTTAGTTACTCCTTACTTTG+GGG + chr5_3:14760684-14760703 None:intergenic 35.0%
GTGTTAGTTACTCCTTACTT+TGG + chr5_3:14760686-14760705 None:intergenic 35.0%
CAAGAATAACGGTTGTATGA+GGG + chr5_3:14760900-14760919 None:intergenic 35.0%
ACAAGAATAACGGTTGTATG+AGG + chr5_3:14760901-14760920 None:intergenic 35.0%
!! AAAAGTATCATGTGTCCGTT+GGG + chr5_3:14761013-14761032 None:intergenic 35.0%
!! TAAAAGTATCATGTGTCCGT+TGG + chr5_3:14761014-14761033 None:intergenic 35.0%
! CTAGCTTTCGAAGTTAAGTT+AGG + chr5_3:14761062-14761081 None:intergenic 35.0%
! ATGGTCTTAACAAAAAGTGG+GGG + chr5_3:14761103-14761122 None:intergenic 35.0%
GACCATATCAATATCCAATG+TGG - chr5_3:14761117-14761136 Msa0801080:intron 35.0%
! GCGGTCACATTTTATGTAAA+TGG - chr5_3:14761209-14761228 Msa0801080:intron 35.0%
GTAAATGGAAAAAGCTGTGA+TGG - chr5_3:14761224-14761243 Msa0801080:intron 35.0%
! TGTGTTTCTTTACCCTTTTC+TGG - chr5_3:14761352-14761371 Msa0801080:intron 35.0%
CAAAAAGGATCTCCAGAAAA+GGG + chr5_3:14761367-14761386 None:intergenic 35.0%
TCAAAAAGGATCTCCAGAAA+AGG + chr5_3:14761368-14761387 None:intergenic 35.0%
!! GAGATCCTTTTTGAGCTTTT+TGG - chr5_3:14761374-14761393 Msa0801080:intron 35.0%
CCTGCATAAGATAAAAACAG+AGG + chr5_3:14761437-14761456 None:intergenic 35.0%
!!! CCTCTGTTTTTATCTTATGC+AGG - chr5_3:14761434-14761453 Msa0801080:intron 35.0%
!! AATCTTAACTTGTGCCCTTA+GGG - chr5_3:14761716-14761735 Msa0801080:intron 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG + chr5_3:14762480-14762499 None:intergenic 35.0%
!!! CATGGACATAATTTTTTCCC+TGG - chr5_3:14761898-14761917 Msa0801080:intron 35.0%
TAGTTCAGTCGACATTCAAT+GGG + chr5_3:14762133-14762152 None:intergenic 35.0%
CGTCATTACACATGATTGTA+AGG + chr5_3:14762162-14762181 None:intergenic 35.0%
TACAATCATGTGTAATGACG+TGG - chr5_3:14762162-14762181 Msa0801080:intron 35.0%
ACAATCATGTGTAATGACGT+GGG - chr5_3:14762163-14762182 Msa0801080:intron 35.0%
ACAAAGGGGTTTAATCTCAT+TGG - chr5_3:14762213-14762232 Msa0801080:intron 35.0%
!!! GCATTCAACCTGTTTTTATC+AGG - chr5_3:14762268-14762287 Msa0801080:intron 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG - chr5_3:14762480-14762499 Msa0801080:intron 35.0%
! GCTGTTTCAAATGTTACTCT+AGG - chr5_3:14762712-14762731 Msa0801080:intron 35.0%
ATGCCTTTCGTAATCAAGAA+GGG + chr5_3:14762738-14762757 None:intergenic 35.0%
TATGCCTTTCGTAATCAAGA+AGG + chr5_3:14762739-14762758 None:intergenic 35.0%
! GAAAGGCATAACATAAAAGG+CGG - chr5_3:14762749-14762768 Msa0801080:intron 35.0%
! ACCTGATTTTCAACATTCAC+AGG + chr5_3:14762809-14762828 None:intergenic 35.0%
GGAAGAAGAGCAAAAATTCT+GGG + chr5_3:14763509-14763528 None:intergenic 35.0%
! GAGTTTAAGGCATCATTATC+TGG - chr5_3:14763558-14763577 Msa0801080:intron 35.0%
! ATTAGGTAAATTTGCTCCCT+TGG - chr5_3:14763633-14763652 Msa0801080:intron 35.0%
CTATTCATAGTCTATGCGAT+AGG + chr5_3:14763663-14763682 None:intergenic 35.0%
!! AGTTGGTGACCCTATTATAA+AGG - chr5_3:14763916-14763935 Msa0801080:CDS 35.0%
GTGACCCTATTATAAAGGTT+TGG - chr5_3:14763921-14763940 Msa0801080:CDS 35.0%
ACCCTATTATAAAGGTTTGG+TGG - chr5_3:14763924-14763943 Msa0801080:CDS 35.0%
!! AGAAGCGTTGAACAATTCTA+TGG + chr5_3:14763997-14764016 None:intergenic 35.0%
TTCAACGCTTCTGATTTCTT+AGG - chr5_3:14764005-14764024 Msa0801080:CDS 35.0%
AAGTAAGCAATCACAACACA+CGG + chr5_3:14764294-14764313 None:intergenic 35.0%
AATCTCTCATGGCTATAAGT+TGG + chr5_3:14764347-14764366 None:intergenic 35.0%
CCAAAGTACAAAATCTCTCA+TGG + chr5_3:14764358-14764377 None:intergenic 35.0%
! CCATGAGAGATTTTGTACTT+TGG - chr5_3:14764355-14764374 Msa0801080:CDS 35.0%
! TCAGCATAGGACATTTTGAA+GGG + chr5_3:14764984-14765003 None:intergenic 35.0%
TTCAAAATGTCCTATGCTGA+GGG - chr5_3:14764984-14765003 Msa0801080:intron 35.0%
TGATCATCCCAATAATCCTT+GGG - chr5_3:14765334-14765353 Msa0801080:intron 35.0%
! GGAAAACTCACCTTTTTGAA+AGG + chr5_3:14765368-14765387 None:intergenic 35.0%
TGATGAGGATCAATTCTTGA+GGG + chr5_3:14765510-14765529 None:intergenic 35.0%
CACTATTCTGACTGTTCAAA+TGG + chr5_3:14765579-14765598 None:intergenic 35.0%
CATTTGAACAGTCAGAATAG+TGG - chr5_3:14765577-14765596 Msa0801080:intron 35.0%
ACCCTGAAACAACAATTTAG+AGG - chr5_3:14765669-14765688 Msa0801080:intron 35.0%
TTCATTAGATTCCGTTAAGC+TGG - chr5_3:14765852-14765871 Msa0801080:five_prime_UTR 35.0%
CATTGAGCACTTTATACTTG+TGG + chr5_3:14765878-14765897 None:intergenic 35.0%
TTGGAGTAAAAGAACTGAGG+GGG + chr5_3:14757603-14757622 None:intergenic 40.0%
!! TTGTGCTGTTTGAGGTTTGA+AGG + chr5_3:14757708-14757727 None:intergenic 40.0%
!! ACCCTAAATTGTGCTGTTTG+AGG + chr5_3:14757716-14757735 None:intergenic 40.0%
GAGGAGAGAAAACCCTAAAT+TGG + chr5_3:14757766-14757785 None:intergenic 40.0%
! GTTTTCTCTCCTCACACTTT+AGG - chr5_3:14757773-14757792 Msa0801080:three_prime_UTR 40.0%
CCTGTGCAAATTGAGATTGA+AGG + chr5_3:14757804-14757823 None:intergenic 40.0%
CCTTCAATCTCAATTTGCAC+AGG - chr5_3:14757801-14757820 Msa0801080:three_prime_UTR 40.0%
TTCTTTACCACCTAACACAC+CGG + chr5_3:14758097-14758116 None:intergenic 40.0%
!! GCTTTGAAGTGTGGTAAGAA+TGG - chr5_3:14758158-14758177 Msa0801080:three_prime_UTR 40.0%
TGAAGTGTGGTAAGAATGGA+CGG - chr5_3:14758162-14758181 Msa0801080:three_prime_UTR 40.0%
ATGACAACATTAGGGAGAGT+TGG - chr5_3:14758198-14758217 Msa0801080:three_prime_UTR 40.0%
TGACAACATTAGGGAGAGTT+GGG - chr5_3:14758199-14758218 Msa0801080:three_prime_UTR 40.0%
AGATGGTAGAAACGAGACTT+AGG - chr5_3:14758241-14758260 Msa0801080:intron 40.0%
AGAAACGAGACTTAGGTGTT+TGG - chr5_3:14758248-14758267 Msa0801080:intron 40.0%
GAAACGAGACTTAGGTGTTT+GGG - chr5_3:14758249-14758268 Msa0801080:intron 40.0%
AAAGAGAGTAGATCAGATGG+AGG - chr5_3:14758304-14758323 Msa0801080:intron 40.0%
AAGAGAGTAGATCAGATGGA+GGG - chr5_3:14758305-14758324 Msa0801080:intron 40.0%
GGAGTCAAATCACTAGAGAT+AGG - chr5_3:14758327-14758346 Msa0801080:intron 40.0%
TGACCCCACTTATTGTGATA+AGG - chr5_3:14758463-14758482 Msa0801080:intron 40.0%
! CCAAGCCTTATCACAATAAG+TGG + chr5_3:14758471-14758490 None:intergenic 40.0%
CCACTTATTGTGATAAGGCT+TGG - chr5_3:14758468-14758487 Msa0801080:intron 40.0%
CTTATTGTGATAAGGCTTGG+TGG - chr5_3:14758471-14758490 Msa0801080:intron 40.0%
TCCTCTACATTAACATTCGC+CGG + chr5_3:14758689-14758708 None:intergenic 40.0%
GCTTCAACTAGTCCACAATT+AGG - chr5_3:14758749-14758768 Msa0801080:intron 40.0%
GATGCATCTTGAAGTTCAAC+CGG - chr5_3:14758832-14758851 Msa0801080:intron 40.0%
GAAGTTTCCTCTACAGTAAC+CGG + chr5_3:14758854-14758873 None:intergenic 40.0%
GGATGAAAATGTGAAACCCA+AGG - chr5_3:14758934-14758953 Msa0801080:intron 40.0%
! AAACCCAAGGTTGTTTCAGA+AGG - chr5_3:14758947-14758966 Msa0801080:intron 40.0%
!! ACACCTTCTGAAACAACCTT+GGG + chr5_3:14758953-14758972 None:intergenic 40.0%
!! AACACCTTCTGAAACAACCT+TGG + chr5_3:14758954-14758973 None:intergenic 40.0%
TGAAGATGCTTCTGATGTGA+AGG - chr5_3:14759054-14759073 Msa0801080:three_prime_UTR 40.0%
! AGTAACGGTGTTGAGAATGA+TGG - chr5_3:14759103-14759122 Msa0801080:three_prime_UTR 40.0%
!! TGATGTTGAAATGATAGCGG+TGG - chr5_3:14759156-14759175 Msa0801080:three_prime_UTR 40.0%
AGGTTCATTTGCATCAGAAG+AGG + chr5_3:14759284-14759303 None:intergenic 40.0%
CTCTGGACTAATGCTTTCTT+TGG - chr5_3:14759756-14759775 Msa0801080:intron 40.0%
TGGACTAATGCTTTCTTTGG+TGG - chr5_3:14759759-14759778 Msa0801080:intron 40.0%
GCTTTCTTTGGTGGAACATA+AGG - chr5_3:14759768-14759787 Msa0801080:intron 40.0%
!! TGGTTGATGGTTAAGCTTGT+CGG - chr5_3:14759940-14759959 Msa0801080:intron 40.0%
TCCCACTTCAGTATGTAAGA+AGG - chr5_3:14760149-14760168 Msa0801080:intron 40.0%
AAAGATTCCTGGGTGATGAA+GGG + chr5_3:14760345-14760364 None:intergenic 40.0%
AAAAGATTCCTGGGTGATGA+AGG + chr5_3:14760346-14760365 None:intergenic 40.0%
TGGCTACTTAAGGTATAGTG+TGG - chr5_3:14760421-14760440 Msa0801080:intron 40.0%
AGGTAACCTCATGTAAGTTG+TGG - chr5_3:14760633-14760652 Msa0801080:intron 40.0%
TAACCTCATGTAAGTTGTGG+CGG - chr5_3:14760636-14760655 Msa0801080:intron 40.0%
TCTTTCAAACCCCCAAAGTA+AGG - chr5_3:14760671-14760690 Msa0801080:intron 40.0%
! TAACTCTAAGAGCTAGCTTG+TGG - chr5_3:14760863-14760882 Msa0801080:intron 40.0%
ACTGTGAAGTTTGCATGCTT+GGG - chr5_3:14760972-14760991 Msa0801080:intron 40.0%
! AACTTCGAAAGCTAGCTCTT+AGG - chr5_3:14761067-14761086 Msa0801080:intron 40.0%
! ACTTCGAAAGCTAGCTCTTA+GGG - chr5_3:14761068-14761087 Msa0801080:intron 40.0%
AGGTTGTTGAGAACAATCTG+CGG - chr5_3:14761190-14761209 Msa0801080:intron 40.0%
! TTTCCGGGGATTTTATGAGA+AGG - chr5_3:14761480-14761499 Msa0801080:intron 40.0%
TCACCTTCTCATAAAATCCC+CGG + chr5_3:14761486-14761505 None:intergenic 40.0%
AACCTTAACATGTGCCCTAA+GGG + chr5_3:14761602-14761621 None:intergenic 40.0%
AAACCTTAACATGTGCCCTA+AGG + chr5_3:14761603-14761622 None:intergenic 40.0%
!! GAATCTTAACTTGTGCCCTT+AGG - chr5_3:14761715-14761734 Msa0801080:intron 40.0%
ACACCCACCTAAAAACACTA+AGG - chr5_3:14761776-14761795 Msa0801080:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG + chr5_3:14762484-14762503 None:intergenic 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG + chr5_3:14762483-14762502 None:intergenic 40.0%
!!! TTTTTTCCCTGGTTTTTCGG+CGG - chr5_3:14761909-14761928 Msa0801080:intron 40.0%
CTTGTATGTTCCAACGTCAT+TGG - chr5_3:14761994-14762013 Msa0801080:intron 40.0%
AGTTCAGTCGACATTCAATG+GGG + chr5_3:14762132-14762151 None:intergenic 40.0%
GTAGTTCAGTCGACATTCAA+TGG + chr5_3:14762134-14762153 None:intergenic 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG - chr5_3:14762483-14762502 Msa0801080:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG - chr5_3:14762484-14762503 Msa0801080:intron 40.0%
ACACCCACCTAAAAACACTA+AGG + chr5_3:14761776-14761795 None:intergenic 40.0%
GTTAAAAAGGTGAGGATTGC+AGG + chr5_3:14762677-14762696 None:intergenic 40.0%
! TTTTCAACATTCACAGGCTC+TGG + chr5_3:14762803-14762822 None:intergenic 40.0%
GCCTGTGAATGTTGAAAATC+AGG - chr5_3:14762805-14762824 Msa0801080:intron 40.0%
CCTCTGTCCTAAATTGTAAG+CGG + chr5_3:14763388-14763407 None:intergenic 40.0%
! CGCTTACAATTTAGGACAGA+GGG - chr5_3:14763386-14763405 Msa0801080:intron 40.0%
GGGAAGAAGAGCAAAAATTC+TGG + chr5_3:14763510-14763529 None:intergenic 40.0%
CTATTCGTAGTCTATGCGAT+AGG + chr5_3:14763721-14763740 None:intergenic 40.0%
CTATCGCATAGACTACGAAT+AGG + chr5_3:14763691-14763710 None:intergenic 40.0%
CTATTCGTAGTCTATGCGAT+AGG - chr5_3:14763721-14763740 Msa0801080:intron 40.0%
GTATAGTGCTCACAGCAATA+AGG + chr5_3:14763766-14763785 None:intergenic 40.0%
CGCTTCTGATTTCTTAGGAT+AGG - chr5_3:14764010-14764029 Msa0801080:CDS 40.0%
! TAAGATGGGCTCTTACGTTT+AGG + chr5_3:14764187-14764206 None:intergenic 40.0%
ACGTAAGAGCCCATCTTATA+TGG - chr5_3:14764189-14764208 Msa0801080:CDS 40.0%
ATAATGCAGTCAAAGCAGCA+CGG - chr5_3:14764212-14764231 Msa0801080:CDS 40.0%
! TGTCTTAACTGTGGTCTTGA+CGG + chr5_3:14764244-14764263 None:intergenic 40.0%
TCAAGACCACAGTTAAGACA+CGG - chr5_3:14764244-14764263 Msa0801080:CDS 40.0%
CAATCACAACACACGGTAAA+AGG + chr5_3:14764287-14764306 None:intergenic 40.0%
CATGCCTATGCTAACATATG+TGG - chr5_3:14764401-14764420 Msa0801080:CDS 40.0%
! ACTTTTACCCAATCAGCAGA+AGG + chr5_3:14764462-14764481 None:intergenic 40.0%
! TGAATTTTGCACACCTCCAA+TGG + chr5_3:14764759-14764778 None:intergenic 40.0%
! TTGGAGGTGTGCAAAATTCA+TGG - chr5_3:14764759-14764778 Msa0801080:CDS 40.0%
! CTCAGCATAGGACATTTTGA+AGG + chr5_3:14764985-14765004 None:intergenic 40.0%
CTTCAAAATGTCCTATGCTG+AGG - chr5_3:14764983-14765002 Msa0801080:intron 40.0%
!! TCTAGTTCTACTCAATGTGC+TGG + chr5_3:14765034-14765053 None:intergenic 40.0%
! CCGCATCAACAAGTTTTCAA+GGG + chr5_3:14765058-14765077 None:intergenic 40.0%
!! CCCTTGAAAACTTGTTGATG+CGG - chr5_3:14765055-14765074 Msa0801080:intron 40.0%
! ACCGCATCAACAAGTTTTCA+AGG + chr5_3:14765059-14765078 None:intergenic 40.0%
!! AGCTATGCTCTGGCTTTAAA+TGG - chr5_3:14765152-14765171 Msa0801080:intron 40.0%
CCAAGAACTGATTAATCCGA+GGG + chr5_3:14765207-14765226 None:intergenic 40.0%
TCCAAGAACTGATTAATCCG+AGG + chr5_3:14765208-14765227 None:intergenic 40.0%
GGATTAATCAGTTCTTGGAC+CGG - chr5_3:14765209-14765228 Msa0801080:intron 40.0%
!! GATGCCTACTTTTCTAAACC+AGG - chr5_3:14765262-14765281 Msa0801080:intron 40.0%
CGTACCTGGTTTAGAAAAGT+AGG + chr5_3:14765269-14765288 None:intergenic 40.0%
CAAGGATTATTGGGATGATC+AGG + chr5_3:14765335-14765354 None:intergenic 40.0%
CTGATCATCCCAATAATCCT+TGG - chr5_3:14765333-14765352 Msa0801080:intron 40.0%
GATCATCCCAATAATCCTTG+GGG - chr5_3:14765335-14765354 Msa0801080:intron 40.0%
CTGATGAGGATCAATTCTTG+AGG + chr5_3:14765511-14765530 None:intergenic 40.0%
TATACTTGTGGCCAGCTTAA+CGG + chr5_3:14765866-14765885 None:intergenic 40.0%
!! AAAGTGCCGCTCAAGTTGAA+GGG - chr5_3:14758046-14758065 Msa0801080:intron 45.0%
AATGGTAAGACCGGTGTGTT+AGG - chr5_3:14758084-14758103 Msa0801080:intron 45.0%
AGTTAAGCGTGTCAGAGATG+AGG - chr5_3:14758130-14758149 Msa0801080:intron 45.0%
!! GAGGATGTTGCTTTGAAGTG+TGG - chr5_3:14758149-14758168 Msa0801080:three_prime_UTR 45.0%
GAAGTGTGGTAAGAATGGAC+GGG - chr5_3:14758163-14758182 Msa0801080:three_prime_UTR 45.0%
GACAACATTAGGGAGAGTTG+GGG - chr5_3:14758200-14758219 Msa0801080:three_prime_UTR 45.0%
GCATGTAGAGAGAAGACTTG+TGG - chr5_3:14758271-14758290 Msa0801080:intron 45.0%
AGAGAGTAGATCAGATGGAG+GGG - chr5_3:14758306-14758325 Msa0801080:intron 45.0%
TCCGGCGAATGTTAATGTAG+AGG - chr5_3:14758685-14758704 Msa0801080:intron 45.0%
AGTTCAACCGGTTACTGTAG+AGG - chr5_3:14758844-14758863 Msa0801080:intron 45.0%
CTCAACTGGAACCGTATGAA+GGG + chr5_3:14758999-14759018 None:intergenic 45.0%
AGATGCTTCTGATGTGAAGG+TGG - chr5_3:14759057-14759076 Msa0801080:three_prime_UTR 45.0%
TCAACACCGTTACTACTCAG+AGG + chr5_3:14759097-14759116 None:intergenic 45.0%
!! TGTTGAAATGATAGCGGTGG+AGG - chr5_3:14759159-14759178 Msa0801080:three_prime_UTR 45.0%
TCATTTGCATCAGAAGAGGC+AGG + chr5_3:14759280-14759299 None:intergenic 45.0%
GTATTAGAAGAGGCAGGTTG+TGG + chr5_3:14759337-14759356 None:intergenic 45.0%
!! TTCTGGCCTTGTATCATCAG+GGG + chr5_3:14759410-14759429 None:intergenic 45.0%
!! CTTCTGGCCTTGTATCATCA+GGG + chr5_3:14759411-14759430 None:intergenic 45.0%
!! ACTTCTGGCCTTGTATCATC+AGG + chr5_3:14759412-14759431 None:intergenic 45.0%
! GCCGCAGAACATGTTTTTCT+TGG - chr5_3:14759510-14759529 Msa0801080:intron 45.0%
AAATGAGTCGGGAACAGAAG+AGG - chr5_3:14759555-14759574 Msa0801080:intron 45.0%
! GGACCAAGCAGCTTTTATGA+AGG - chr5_3:14759576-14759595 Msa0801080:intron 45.0%
GCTCCTTCATAAAAGCTGCT+TGG + chr5_3:14759582-14759601 None:intergenic 45.0%
GGTTATGGAGAGCTGTAATG+AGG - chr5_3:14759789-14759808 Msa0801080:intron 45.0%
ATGGAGAGCTGTAATGAGGT+TGG - chr5_3:14759793-14759812 Msa0801080:intron 45.0%
TGGAGAGCTGTAATGAGGTT+GGG - chr5_3:14759794-14759813 Msa0801080:intron 45.0%
TGGGTGATGAAGGGAATATG+GGG + chr5_3:14760336-14760355 None:intergenic 45.0%
CTGGGTGATGAAGGGAATAT+GGG + chr5_3:14760337-14760356 None:intergenic 45.0%
CTTAAGGTATAGTGTGGCTG+TGG - chr5_3:14760427-14760446 Msa0801080:intron 45.0%
ATGTCCAGTCCTAGGCATAA+GGG + chr5_3:14760948-14760967 None:intergenic 45.0%
GACTGTGAAGTTTGCATGCT+TGG - chr5_3:14760971-14760990 Msa0801080:intron 45.0%
TTTGCATGCTTGGGCATTTG+CGG - chr5_3:14760981-14761000 Msa0801080:intron 45.0%
ATAAAATCCCCGGAAAGTCC+AGG + chr5_3:14761476-14761495 None:intergenic 45.0%
! TTGTGCTAACTTGTGCCCTT+AGG - chr5_3:14761584-14761603 Msa0801080:intron 45.0%
! TGTGCTAACTTGTGCCCTTA+GGG - chr5_3:14761585-14761604 Msa0801080:intron 45.0%
GCATTTGCGAATTGCTTGAG+TGG - chr5_3:14762622-14762641 Msa0801080:intron 45.0%
GCAGGATTGCATCATTCTGA+AGG + chr5_3:14762659-14762678 None:intergenic 45.0%
AGGCCCTTCTTGATTACGAA+AGG - chr5_3:14762732-14762751 Msa0801080:intron 45.0%
!!! TTGCTTACATTTTGGGACGG+AGG + chr5_3:14763108-14763127 None:intergenic 45.0%
! CCGCTTACAATTTAGGACAG+AGG - chr5_3:14763385-14763404 Msa0801080:intron 45.0%
!! CTATGCGATAGGAGTACCAA+GGG + chr5_3:14763652-14763671 None:intergenic 45.0%
!! TCTATGCGATAGGAGTACCA+AGG + chr5_3:14763653-14763672 None:intergenic 45.0%
! TGTGTCTAGGGTTTAGCATC+AGG - chr5_3:14763821-14763840 Msa0801080:intron 45.0%
GTTTAGCATCAGGTAGATCC+CGG - chr5_3:14763831-14763850 Msa0801080:intron 45.0%
TCACAACGTCTTCTTGGCAA+TGG - chr5_3:14763890-14763909 Msa0801080:CDS 45.0%
CTTCTTGGCAATGGTGAAGT+TGG - chr5_3:14763899-14763918 Msa0801080:CDS 45.0%
!! GCAGCTTAAGAGCATCAGTA+TGG - chr5_3:14764062-14764081 Msa0801080:CDS 45.0%
GAGTAACCGTGTCTTAACTG+TGG + chr5_3:14764253-14764272 None:intergenic 45.0%
GCAGCCACATATGTTAGCAT+AGG + chr5_3:14764408-14764427 None:intergenic 45.0%
TGCTAACATATGTGGCTGCT+AGG - chr5_3:14764409-14764428 Msa0801080:CDS 45.0%
AACATATGTGGCTGCTAGGT+TGG - chr5_3:14764413-14764432 Msa0801080:CDS 45.0%
ACATATGTGGCTGCTAGGTT+GGG - chr5_3:14764414-14764433 Msa0801080:CDS 45.0%
ACATAGGACCTTCTGCTGAT+TGG - chr5_3:14764451-14764470 Msa0801080:CDS 45.0%
! CATAGGACCTTCTGCTGATT+GGG - chr5_3:14764452-14764471 Msa0801080:CDS 45.0%
! TTTAGTTCCTGGCCTTCTGA+GGG - chr5_3:14764606-14764625 Msa0801080:CDS 45.0%
AATGGCAACTCTCATGGGAA+GGG + chr5_3:14764741-14764760 None:intergenic 45.0%
GAGGTGTGCAAAATTCATGG+CGG - chr5_3:14764762-14764781 Msa0801080:CDS 45.0%
! TGCAAAATTCATGGCGGAGT+GGG - chr5_3:14764768-14764787 Msa0801080:CDS 45.0%
ATGACAGATACCCTCAGCAT+AGG + chr5_3:14764997-14765016 None:intergenic 45.0%
!! TGCTGAGGGTATCTGTCATT+AGG - chr5_3:14764998-14765017 Msa0801080:intron 45.0%
TGTTCTCCTCTCAAGGTCTT+AGG - chr5_3:14765083-14765102 Msa0801080:intron 45.0%
ATCGAACCTAAGACCTTGAG+AGG + chr5_3:14765092-14765111 None:intergenic 45.0%
ACCAATAATTGGCATCAGGG+GGG + chr5_3:14765115-14765134 None:intergenic 45.0%
CACCAATAATTGGCATCAGG+GGG + chr5_3:14765116-14765135 None:intergenic 45.0%
CCACCAATAATTGGCATCAG+GGG + chr5_3:14765117-14765136 None:intergenic 45.0%
CCCACCAATAATTGGCATCA+GGG + chr5_3:14765118-14765137 None:intergenic 45.0%
CCCTGATGCCAATTATTGGT+GGG - chr5_3:14765115-14765134 Msa0801080:intron 45.0%
GGACTTAGCCCACCAATAAT+TGG + chr5_3:14765126-14765145 None:intergenic 45.0%
GTCCATATAGAGCTATGCTC+TGG - chr5_3:14765142-14765161 Msa0801080:intron 45.0%
! AGCCAGAGCATAGCTCTATA+TGG + chr5_3:14765147-14765166 None:intergenic 45.0%
TTAAATGGTGCCCCCACAAA+TGG - chr5_3:14765167-14765186 Msa0801080:intron 45.0%
CCCTCGGATTAATCAGTTCT+TGG - chr5_3:14765204-14765223 Msa0801080:intron 45.0%
TTATGACCAAACGTCCTGCT+GGG + chr5_3:14765304-14765323 None:intergenic 45.0%
GTCACACCCCAAGGATTATT+GGG + chr5_3:14765344-14765363 None:intergenic 45.0%
TGTCACACCCCAAGGATTAT+TGG + chr5_3:14765345-14765364 None:intergenic 45.0%
GGGTGTGACACCTTTCAAAA+AGG - chr5_3:14765355-14765374 Msa0801080:intron 45.0%
!!! TTTATATCATTTTAAAATTT+TGG - chr5_3:14761030-14761049 Msa0801080:intron 5.0%
!!! TTTTTTTTTTTTTTATGATA+TGG - chr5_3:14761323-14761342 Msa0801080:intron 5.0%
!!! TTTTTTTTTTTTTATGATAT+GGG - chr5_3:14761324-14761343 Msa0801080:intron 5.0%
GTAAAAGAACTGAGGGGGAG+AGG + chr5_3:14757598-14757617 None:intergenic 50.0%
AAGGGCGATCCTAAAGTGTG+AGG + chr5_3:14757785-14757804 None:intergenic 50.0%
!! GAAAGTGCCGCTCAAGTTGA+AGG - chr5_3:14758045-14758064 Msa0801080:intron 50.0%
AGAAAACGACGAAGTGGGTC+AGG - chr5_3:14758658-14758677 Msa0801080:intron 50.0%
GAAAACGACGAAGTGGGTCA+GGG - chr5_3:14758659-14758678 Msa0801080:intron 50.0%
CCTCAACTGGAACCGTATGA+AGG + chr5_3:14759000-14759019 None:intergenic 50.0%
CCTTCATACGGTTCCAGTTG+AGG - chr5_3:14758997-14759016 Msa0801080:intron 50.0%
TCATACGGTTCCAGTTGAGG+CGG - chr5_3:14759000-14759019 Msa0801080:intron 50.0%
! GGCGGCTGATGCTCATATTT+TGG - chr5_3:14759018-14759037 Msa0801080:intron 50.0%
!! AATGATAGCGGTGGAGGTTG+AGG - chr5_3:14759165-14759184 Msa0801080:three_prime_UTR 50.0%
GAAGCCTGAAGTCTGTGAAG+CGG - chr5_3:14759189-14759208 Msa0801080:three_prime_UTR 50.0%
CGATCCTACTACACCACAAC+CGG - chr5_3:14759384-14759403 Msa0801080:intron 50.0%
ACATGTTCTGCGGCGAATCT+GGG + chr5_3:14759504-14759523 None:intergenic 50.0%
AACATGTTCTGCGGCGAATC+TGG + chr5_3:14759505-14759524 None:intergenic 50.0%
! CTTCTTTAGGGAGAGGAGCA+TGG - chr5_3:14759609-14759628 Msa0801080:CDS 50.0%
AGAGCTGTAATGAGGTTGGG+AGG - chr5_3:14759797-14759816 Msa0801080:intron 50.0%
TGATGAAGGGAATATGGGGC+AGG + chr5_3:14760332-14760351 None:intergenic 50.0%
CCTGGGTGATGAAGGGAATA+TGG + chr5_3:14760338-14760357 None:intergenic 50.0%
CCATATTCCCTTCATCACCC+AGG - chr5_3:14760335-14760354 Msa0801080:intron 50.0%
ACTCCGCCACAACTTACATG+AGG + chr5_3:14760642-14760661 None:intergenic 50.0%
! ATGTAAGTTGTGGCGGAGTG+TGG - chr5_3:14760643-14760662 Msa0801080:intron 50.0%
! TGTAAGTTGTGGCGGAGTGT+GGG - chr5_3:14760644-14760663 Msa0801080:intron 50.0%
GATGTCCAGTCCTAGGCATA+AGG + chr5_3:14760949-14760968 None:intergenic 50.0%
CAGTCTAGATGTCCAGTCCT+AGG + chr5_3:14760956-14760975 None:intergenic 50.0%
TTGCATGCTTGGGCATTTGC+GGG - chr5_3:14760982-14761001 Msa0801080:intron 50.0%
CCACAGTTTCCTGGACTTTC+CGG - chr5_3:14761464-14761483 Msa0801080:intron 50.0%
CACAGTTTCCTGGACTTTCC+GGG - chr5_3:14761465-14761484 Msa0801080:intron 50.0%
ACAGTTTCCTGGACTTTCCG+GGG - chr5_3:14761466-14761485 Msa0801080:intron 50.0%
TGCCCTTAGGGCACATGTTA+AGG - chr5_3:14761597-14761616 Msa0801080:intron 50.0%
! TCAACATTCACAGGCTCTGG+AGG + chr5_3:14762800-14762819 None:intergenic 50.0%
CTGTTCAGCAGCATATCTCC+GGG + chr5_3:14763852-14763871 None:intergenic 50.0%
CCTGTTCAGCAGCATATCTC+CGG + chr5_3:14763853-14763872 None:intergenic 50.0%
ATGCTGCTGAACAGGCTATG+CGG - chr5_3:14763858-14763877 Msa0801080:CDS 50.0%
TGGCACTCACAACGTCTTCT+TGG - chr5_3:14763884-14763903 Msa0801080:CDS 50.0%
GGAACAGCTGTGGTTGACAT+AGG - chr5_3:14764435-14764454 Msa0801080:CDS 50.0%
! CTTTAGTTCCTGGCCTTCTG+AGG - chr5_3:14764605-14764624 Msa0801080:CDS 50.0%
ATGGCAACTCTCATGGGAAG+GGG + chr5_3:14764740-14764759 None:intergenic 50.0%
CAATGGCAACTCTCATGGGA+AGG + chr5_3:14764742-14764761 None:intergenic 50.0%
CTTCCCATGAGAGTTGCCAT+TGG - chr5_3:14764740-14764759 Msa0801080:CDS 50.0%
CCTCCAATGGCAACTCTCAT+GGG + chr5_3:14764746-14764765 None:intergenic 50.0%
ACCTCCAATGGCAACTCTCA+TGG + chr5_3:14764747-14764766 None:intergenic 50.0%
! GTGCAAAATTCATGGCGGAG+TGG - chr5_3:14764767-14764786 Msa0801080:CDS 50.0%
! AAAATTCATGGCGGAGTGGG+TGG - chr5_3:14764771-14764790 Msa0801080:CDS 50.0%
! GGTGTTGTGTTCTCCTCTCA+AGG - chr5_3:14765076-14765095 Msa0801080:intron 50.0%
TCCCCCCTGATGCCAATTAT+TGG - chr5_3:14765111-14765130 Msa0801080:intron 50.0%
CCCCTGATGCCAATTATTGG+TGG - chr5_3:14765114-14765133 Msa0801080:intron 50.0%
GCCCACCAATAATTGGCATC+AGG + chr5_3:14765119-14765138 None:intergenic 50.0%
GGTCTGATTGAACACGTACC+TGG + chr5_3:14765283-14765302 None:intergenic 50.0%
CTTATGACCAAACGTCCTGC+TGG + chr5_3:14765305-14765324 None:intergenic 50.0%
GCAGGACGTTTGGTCATAAG+CGG - chr5_3:14765305-14765324 Msa0801080:intron 50.0%
!! TTGAAAGGTGTCACACCCCA+AGG + chr5_3:14765353-14765372 None:intergenic 50.0%
TCCTCATCAGACATCAGCTG+TGG - chr5_3:14765521-14765540 Msa0801080:intron 50.0%
ACCACAGCTGATGTCTGATG+AGG + chr5_3:14765525-14765544 None:intergenic 50.0%
GGTAAGACCGGTGTGTTAGG+TGG - chr5_3:14758087-14758106 Msa0801080:intron 55.0%
! GAAGGAAGAGGTGCATGCTG+AGG - chr5_3:14758913-14758932 Msa0801080:three_prime_UTR 55.0%
ACAGCCGCTTCACAGACTTC+AGG + chr5_3:14759196-14759215 None:intergenic 55.0%
GAGGCAGGTTGTGGTGTAGT+AGG + chr5_3:14759265-14759284 None:intergenic 55.0%
GCATCAGAAGAGGCAGGTTG+TGG + chr5_3:14759274-14759293 None:intergenic 55.0%
GAGGCAGGTTGTGGTGTAGT+AGG + chr5_3:14759265-14759284 None:intergenic 55.0%
AACCGGCCCCTGATGATACA+AGG - chr5_3:14759401-14759420 Msa0801080:intron 55.0%
GAGGTTGGGAGGCTATGAGA+AGG - chr5_3:14759808-14759827 Msa0801080:intron 55.0%
ACATCCCCTCCCTTATGCCT+AGG - chr5_3:14760936-14760955 Msa0801080:intron 55.0%
CAGTCCTAGGCATAAGGGAG+GGG + chr5_3:14760943-14760962 None:intergenic 55.0%
CCAGTCCTAGGCATAAGGGA+GGG + chr5_3:14760944-14760963 None:intergenic 55.0%
TCCAGTCCTAGGCATAAGGG+AGG + chr5_3:14760945-14760964 None:intergenic 55.0%
CATTTGCGGGTGTGACCCAA+CGG - chr5_3:14760995-14761014 Msa0801080:intron 55.0%
GAGTGGCAAGCGTTCCACAT+TGG + chr5_3:14761134-14761153 None:intergenic 55.0%
GGACATGCACCACAGTTTCC+TGG - chr5_3:14761455-14761474 Msa0801080:intron 55.0%
CCGGAAAGTCCAGGAAACTG+TGG + chr5_3:14761467-14761486 None:intergenic 55.0%
!! GAAGTGCCGCCGAAAAACCA+GGG + chr5_3:14761918-14761937 None:intergenic 55.0%
CCGGAGATATGCTGCTGAAC+AGG - chr5_3:14763850-14763869 Msa0801080:CDS 55.0%
TGCTGCTGAACAGGCTATGC+GGG - chr5_3:14763859-14763878 Msa0801080:CDS 55.0%
! TGCTAGGTTGGGAACAGCTG+TGG - chr5_3:14764425-14764444 Msa0801080:CDS 55.0%
GTAGTACCTCCTCCCTCAGA+AGG + chr5_3:14764621-14764640 None:intergenic 55.0%
CCCATGAGAGTTGCCATTGG+AGG - chr5_3:14764743-14764762 Msa0801080:CDS 55.0%
ATGGTGCCCCCACAAATGGA+CGG - chr5_3:14765171-14765190 Msa0801080:intron 55.0%
ATCCCACCGTCCATTTGTGG+GGG + chr5_3:14765180-14765199 None:intergenic 55.0%
GATCCCACCGTCCATTTGTG+GGG + chr5_3:14765181-14765200 None:intergenic 55.0%
CGATCCCACCGTCCATTTGT+GGG + chr5_3:14765182-14765201 None:intergenic 55.0%
CCACAAATGGACGGTGGGAT+CGG - chr5_3:14765180-14765199 Msa0801080:intron 55.0%
CGTGTTCAATCAGACCCAGC+AGG - chr5_3:14765287-14765306 Msa0801080:intron 55.0%
ATCAGACCCAGCAGGACGTT+TGG - chr5_3:14765295-14765314 Msa0801080:intron 55.0%
! TCAGCTGTGGTAACGCTGCA+TGG - chr5_3:14765534-14765553 Msa0801080:intron 55.0%
! GCGTCAAGCGCCGCGTTATT+TGG + chr5_3:14757622-14757641 None:intergenic 60.0%
! CGAAGTGGGTCAGGGTGTTC+CGG - chr5_3:14758667-14758686 Msa0801080:intron 60.0%
TGAGCATCAGCCGCCTCAAC+TGG + chr5_3:14759013-14759032 None:intergenic 60.0%
GTATCATCAGGGGCCGGTTG+TGG + chr5_3:14759400-14759419 None:intergenic 60.0%
! GGCCTTGTATCATCAGGGGC+CGG + chr5_3:14759406-14759425 None:intergenic 60.0%
GAAGGGAATATGGGGCAGGC+TGG + chr5_3:14760328-14760347 None:intergenic 60.0%
CCCTCCCTTATGCCTAGGAC+TGG - chr5_3:14760941-14760960 Msa0801080:intron 60.0%
!! GGAAGTGCCGCCGAAAAACC+AGG + chr5_3:14761919-14761938 None:intergenic 60.0%
!! GGCTCTGGAGGAGATGTGAC+AGG + chr5_3:14762788-14762807 None:intergenic 60.0%
GCTGCTGAACAGGCTATGCG+GGG - chr5_3:14763860-14763879 Msa0801080:CDS 60.0%
CTGAACAGGCTATGCGGGGT+TGG - chr5_3:14763864-14763883 Msa0801080:CDS 60.0%
! AGTTCCTGGCCTTCTGAGGG+AGG - chr5_3:14764609-14764628 Msa0801080:CDS 60.0%
TGCCCCCACAAATGGACGGT+GGG - chr5_3:14765175-14765194 Msa0801080:intron 60.0%
CCGATCCCACCGTCCATTTG+TGG + chr5_3:14765183-14765202 None:intergenic 60.0%
GGGGCCGGTTGTGGTGTAGT+AGG + chr5_3:14759391-14759410 None:intergenic 65.0%
! TCCTGGCCTTCTGAGGGAGG+AGG - chr5_3:14764612-14764631 Msa0801080:CDS 65.0%
ACCTCCTCCCTCAGAAGGCC+AGG + chr5_3:14764616-14764635 None:intergenic 65.0%
GTGCCCCCACAAATGGACGG+TGG - chr5_3:14765174-14765193 Msa0801080:intron 65.0%
GGACGGTGGGATCGGACCCT+CGG - chr5_3:14765188-14765207 Msa0801080:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 14757561 14765957 14757561 ID=Msa0801080;Name=Msa0801080
chr5_3 mRNA 14757561 14765957 14757561 ID=Msa0801080-mRNA-1;Parent=Msa0801080;Name=Msa0801080-mRNA-1;_AED=0.09;_eAED=0.09;_QI=297|0.90|0.91|1|0.81|0.75|12|845|503
chr5_3 exon 14757561 14758023 14757561 ID=Msa0801080-mRNA-1:exon:6202;Parent=Msa0801080-mRNA-1
chr5_3 exon 14758142 14758234 14758142 ID=Msa0801080-mRNA-1:exon:6201;Parent=Msa0801080-mRNA-1
chr5_3 exon 14758885 14758935 14758885 ID=Msa0801080-mRNA-1:exon:6200;Parent=Msa0801080-mRNA-1
chr5_3 exon 14759021 14759339 14759021 ID=Msa0801080-mRNA-1:exon:6199;Parent=Msa0801080-mRNA-1
chr5_3 exon 14759435 14759491 14759435 ID=Msa0801080-mRNA-1:exon:6198;Parent=Msa0801080-mRNA-1
chr5_3 exon 14759581 14759688 14759581 ID=Msa0801080-mRNA-1:exon:6197;Parent=Msa0801080-mRNA-1
chr5_3 exon 14760692 14760784 14760692 ID=Msa0801080-mRNA-1:exon:6196;Parent=Msa0801080-mRNA-1
chr5_3 exon 14762017 14762062 14762017 ID=Msa0801080-mRNA-1:exon:6195;Parent=Msa0801080-mRNA-1
chr5_3 exon 14762831 14762883 14762831 ID=Msa0801080-mRNA-1:exon:6194;Parent=Msa0801080-mRNA-1
chr5_3 exon 14763689 14763728 14763689 ID=Msa0801080-mRNA-1:exon:6193;Parent=Msa0801080-mRNA-1
chr5_3 exon 14763841 14764909 14763841 ID=Msa0801080-mRNA-1:exon:6192;Parent=Msa0801080-mRNA-1
chr5_3 exon 14765696 14765957 14765696 ID=Msa0801080-mRNA-1:exon:6191;Parent=Msa0801080-mRNA-1
chr5_3 five_prime_UTR 14765696 14765957 14765696 ID=Msa0801080-mRNA-1:five_prime_utr;Parent=Msa0801080-mRNA-1
chr5_3 five_prime_UTR 14764875 14764909 14764875 ID=Msa0801080-mRNA-1:five_prime_utr;Parent=Msa0801080-mRNA-1
chr5_3 CDS 14763841 14764874 14763841 ID=Msa0801080-mRNA-1:cds;Parent=Msa0801080-mRNA-1
chr5_3 CDS 14763689 14763728 14763689 ID=Msa0801080-mRNA-1:cds;Parent=Msa0801080-mRNA-1
chr5_3 CDS 14762831 14762883 14762831 ID=Msa0801080-mRNA-1:cds;Parent=Msa0801080-mRNA-1
chr5_3 CDS 14762017 14762062 14762017 ID=Msa0801080-mRNA-1:cds;Parent=Msa0801080-mRNA-1
chr5_3 CDS 14760692 14760784 14760692 ID=Msa0801080-mRNA-1:cds;Parent=Msa0801080-mRNA-1
chr5_3 CDS 14759581 14759688 14759581 ID=Msa0801080-mRNA-1:cds;Parent=Msa0801080-mRNA-1
chr5_3 CDS 14759435 14759491 14759435 ID=Msa0801080-mRNA-1:cds;Parent=Msa0801080-mRNA-1
chr5_3 CDS 14759259 14759339 14759259 ID=Msa0801080-mRNA-1:cds;Parent=Msa0801080-mRNA-1
chr5_3 three_prime_UTR 14759021 14759258 14759021 ID=Msa0801080-mRNA-1:three_prime_utr;Parent=Msa0801080-mRNA-1
chr5_3 three_prime_UTR 14758885 14758935 14758885 ID=Msa0801080-mRNA-1:three_prime_utr;Parent=Msa0801080-mRNA-1
chr5_3 three_prime_UTR 14758142 14758234 14758142 ID=Msa0801080-mRNA-1:three_prime_utr;Parent=Msa0801080-mRNA-1
chr5_3 three_prime_UTR 14757561 14758023 14757561 ID=Msa0801080-mRNA-1:three_prime_utr;Parent=Msa0801080-mRNA-1
Gene Sequence

>Msa0801080

ATGAGTGATACAAAAGAAAACGACGAAGTGGGTCAGGGTGTTCCGGCGAATGTTAATGTAGAGGAAGCTGACTATGTCATTGTTGAAAATGAAAATTCAAATCAAGCTTCAACTAGTCCACAATTAGGAGATGATGATGAGATGATTATTGATAATCTTGCTGGTTTGGATTCATATCTTGATCAAGAGATGCATCTTGAAGTTCAACCGGTTACTGTAGAGGAAACTTCAAAGAATGTTGAAAATGTGTCAAATGATGTTAAAATTGGGAAGGAAGAGGTGCATGCTGAGGATGAAAATGTGAAACCCAAGGTTGTTTCAGAAGGTGTTTCACAAGAAAATGTTCAAGATACCCTTCATACGGTTCCAGTTGAGGCGGCTGATGCTCATATTTTGGATACAGCTGAGGGTGAAGATGCTTCTGATGTGAAGGTGGACGCCAAAAAACTTCCTCTGAGTAGTAACGGTGTTGAGAATGATGGTATTGCATGTCAAAATAATGTTAGTGATGGTGATGTTGAAATGATAGCGGTGGAGGTTGAGGTGAAGCCTGAAGTCTGTGAAGCGGCTGTTAGTAAAGCTTGTGAAGTTGAACCTATATCGTTGAGTAATAACAATCCTACTACACCACAACCTGCCTCTTCTGATGCAAATGAACCTATACTGTCAAATCATAATGATCCTACTACACCACAACCTGCCTCTTCTAATACAAATGAACCTATACTGTCAAATCATAACGATCCTACTACACCACAACCGGCCCCTGATGATACAAGGCCAGAAGTCAAGAATGTTTTAGAAGTTGAAAGTAAGGGTGGTGAAGAGCAAGTTGCTGAGCCTGTAGATAATGAAAACCCAGATTCGCCGCAGAACATGTTTTTCTTGGATGCTGATCATTATTATGACGGAAATGAGTCGGGAACAGAAGAGGACCAAGCAGCTTTTATGAAGGAGCTTGAAAACTTCTTTAGGGAGAGGAGCATGGACTTCAAACCTCCCAAATTTTATGGAGAATGGCTTAATTGCCTTAAGTTATGGAGAGCTGTAATGAGGTTGGGAGGCTATGAGAAGGTAACCTCATGTAAGTTGTGGCGGAGTGTGGGAGAGTCTTTCAAACCCCCAAAGACATGCACCACAGTTTCCTGGACTTTCCGGGGATTTTATGAGAAGGCCCTTCTTGATTACGAAAGGCATAACATAAAAGGCGGCGAGCTGAATGTACCTGTCACATCTCCTCCAGAGCCTGTGAATGTTGAAAATCAGGGTTTAGCATCAGGTAGATCCCGGAGATATGCTGCTGAACAGGCTATGCGGGGTTGGCACTCACAACGTCTTCTTGGCAATGGTGAAGTTGGTGACCCTATTATAAAGGATAGGAATGCTGTGTCTGTGCAAAAGCGTGAAAAGCAGCTTAAGAGCATCAGTATGATGTACCTAAACGTAAGAGCCCATCTTATATGGATAATGCAGTCAAAGCAGCACGGAGTAAACCGTCAAGACCACAGTTAA
Protein sequence

>Msa0801080

MSDTKENDEVGQGVPANVNVEEADYVIVENENSNQASTSPQLGDDDEMIIDNLAGLDSYLDQEMHLEVQPVTVEETSKNVENVSNDVKIGKEEVHAEDENVKPKVVSEGVSQENVQDTLHTVPVEAADAHILDTAEGEDASDVKVDAKKLPLSSNGVENDGIACQNNVSDGDVEMIAVEVEVKPEVCEAAVSKACEVEPISLSNNNPTTPQPASSDANEPILSNHNDPTTPQPASSNTNEPILSNHNDPTTPQPAPDDTRPEVKNVLEVESKGGEEQVAEPVDNENPDSPQNMFFLDADHYYDGNESGTEEDQAAFMKELENFFRERSMDFKPPKFYGEWLNCLKLWRAVMRLGGYEKVTSCKLWRSVGESFKPPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPVTSPPEPVNVENQGLASGRSRRYAAEQAMRGWHSQRLLGNGEVGDPIIKDRNAVSVQKREKQLKSISMMYLNVRAHLIWIMQSKQHGVNRQDHS*