Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719920 | RDY07293.1 | 59.672 | 548 | 162 | 8 | 1 | 524 | 1 | 513 | 0.0 | 630 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719920 | sp|P0CB25|BH131_ARATH | 46.193 | 197 | 85 | 6 | 319 | 506 | 38 | 222 | 2.17e-41 | 152 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719920 | A0A371HX18 | 59.672 | 548 | 162 | 8 | 1 | 524 | 1 | 513 | 0.0 | 630 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0719920 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0719920 | Msa0847940 | 0.833044 | 6.684684e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719920 | MtrunA17_Chr5g0412361 | 91.234 | 308 | 23 | 2 | 1 | 306 | 1 | 306 | 0.0 | 582 |
| Msa0719920 | MtrunA17_Chr5g0412371 | 94.231 | 208 | 11 | 1 | 323 | 530 | 1 | 207 | 1.42e-136 | 394 |
| Msa0719920 | MtrunA17_Chr8g0367601 | 46.231 | 199 | 85 | 6 | 17 | 198 | 15 | 208 | 1.28e-49 | 171 |
| Msa0719920 | MtrunA17_Chr3g0132971 | 34.171 | 199 | 102 | 7 | 21 | 198 | 18 | 208 | 2.86e-29 | 115 |
| Msa0719920 | MtrunA17_Chr5g0427361 | 41.143 | 175 | 81 | 4 | 354 | 506 | 23 | 197 | 8.65e-24 | 100 |
| Msa0719920 | MtrunA17_Chr7g0255961 | 37.079 | 178 | 96 | 5 | 354 | 522 | 62 | 232 | 1.22e-23 | 100 |
| Msa0719920 | MtrunA17_Chr5g0427371 | 31.102 | 254 | 106 | 8 | 21 | 213 | 19 | 264 | 2.42e-23 | 101 |
| Msa0719920 | MtrunA17_Chr1g0198801 | 35.955 | 178 | 96 | 3 | 354 | 520 | 145 | 315 | 6.23e-23 | 100 |
| Msa0719920 | MtrunA17_Chr3g0113721 | 36.257 | 171 | 85 | 4 | 367 | 520 | 39 | 202 | 1.57e-21 | 93.6 |
| Msa0719920 | MtrunA17_Chr2g0325521 | 39.583 | 144 | 72 | 3 | 362 | 499 | 54 | 188 | 1.06e-18 | 85.9 |
| Msa0719920 | MtrunA17_Chr4g0041051 | 36.364 | 154 | 81 | 3 | 359 | 505 | 60 | 203 | 2.44e-16 | 79.0 |
| Msa0719920 | MtrunA17_Chr2g0279591 | 41.791 | 67 | 39 | 0 | 132 | 198 | 244 | 310 | 5.86e-13 | 71.2 |
| Msa0719920 | MtrunA17_Chr4g0049941 | 53.659 | 41 | 19 | 0 | 131 | 171 | 218 | 258 | 2.23e-12 | 69.3 |
| Msa0719920 | MtrunA17_Chr4g0049941 | 34.884 | 129 | 69 | 5 | 6 | 121 | 4 | 130 | 5.13e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719920 | AT4G38070.1 | 46.193 | 197 | 85 | 6 | 319 | 506 | 38 | 222 | 2.21e-42 | 152 |
| Msa0719920 | AT5G09540.1 | 31.818 | 220 | 104 | 6 | 15 | 196 | 18 | 229 | 2.00e-26 | 109 |
| Msa0719920 | AT5G64360.1 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 3.80e-24 | 105 |
| Msa0719920 | AT2G01710.1 | 28.205 | 234 | 121 | 8 | 21 | 216 | 21 | 245 | 4.23e-24 | 103 |
| Msa0719920 | AT5G64360.5 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 6.15e-24 | 105 |
| Msa0719920 | AT5G64360.7 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 6.15e-24 | 105 |
| Msa0719920 | AT5G64360.6 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 6.15e-24 | 105 |
| Msa0719920 | AT5G64360.3 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 6.15e-24 | 105 |
| Msa0719920 | AT5G64360.2 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 6.15e-24 | 105 |
| Msa0719920 | AT5G64360.4 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 6.15e-24 | 105 |
| Msa0719920 | AT2G01710.2 | 28.205 | 234 | 121 | 8 | 21 | 216 | 65 | 289 | 9.46e-24 | 103 |
| Msa0719920 | AT3G25710.1 | 41.611 | 149 | 77 | 3 | 354 | 499 | 119 | 260 | 1.41e-23 | 102 |
| Msa0719920 | AT1G68810.1 | 42.012 | 169 | 78 | 3 | 365 | 520 | 172 | 333 | 5.35e-23 | 101 |
| Msa0719920 | AT3G56770.1 | 33.333 | 174 | 93 | 6 | 362 | 522 | 39 | 202 | 1.61e-20 | 90.9 |
| Msa0719920 | AT2G40200.1 | 37.778 | 135 | 68 | 3 | 368 | 494 | 64 | 190 | 1.60e-18 | 85.9 |
| Msa0719920 | AT2G41130.1 | 35.429 | 175 | 95 | 5 | 359 | 522 | 58 | 225 | 3.39e-18 | 84.7 |
Find 137 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTAAGAGGATTGCGAATT+TGG | 0.163218 | 5_1:+15593682 | None:intergenic |
| TGGGGCAGACAAATTGAATT+TGG | 0.253589 | 5_1:-15590358 | Msa0719920:CDS |
| AGAATGACAAGATTTGATTT+TGG | 0.263511 | 5_1:-15593101 | Msa0719920:CDS |
| TAACCGCCACCGCGGCGTTT+TGG | 0.301094 | 5_1:-15593544 | Msa0719920:CDS |
| GGTTTCTTTGGGAAGCAAAA+TGG | 0.324722 | 5_1:-15591071 | Msa0719920:CDS |
| GTTGGTGCAACCGTCGTAGA+AGG | 0.342285 | 5_1:-15593401 | Msa0719920:CDS |
| TGTCTGCCCCACCAGGAAAC+TGG | 0.346018 | 5_1:+15590370 | None:intergenic |
| TGATACAAATTCCAACAATA+AGG | 0.361104 | 5_1:+15593512 | None:intergenic |
| TTGGACCCATAACACACTTC+TGG | 0.378699 | 5_1:+15590191 | None:intergenic |
| ACACTAACTTTGATCAAGTT+GGG | 0.389149 | 5_1:+15590744 | None:intergenic |
| AGGTGTTGAAAATGAAGGTT+TGG | 0.393224 | 5_1:-15590169 | Msa0719920:CDS |
| AATGAAAGCCAAAGTTGTTA+AGG | 0.399548 | 5_1:-15590241 | Msa0719920:CDS |
| GTGTTGATGATGTCTTTGTT+GGG | 0.400072 | 5_1:-15593028 | Msa0719920:CDS |
| GGTGTTGATGATGTCTTTGT+TGG | 0.400921 | 5_1:-15593029 | Msa0719920:CDS |
| GAAGAACCAGAAGTGTGTTA+TGG | 0.408049 | 5_1:-15590197 | Msa0719920:CDS |
| CATCTCAACCTTAACAACTT+TGG | 0.408942 | 5_1:+15590233 | None:intergenic |
| CGCTGGCGGCGGTGAAGTTG+CGG | 0.410086 | 5_1:+15593849 | None:intergenic |
| GGATGGAAAGGATTGTGAAT+TGG | 0.411240 | 5_1:-15593063 | Msa0719920:CDS |
| GACGGTGATGAGAGCTTAAT+GGG | 0.418200 | 5_1:-15593314 | Msa0719920:CDS |
| AAGAACCAGAAGTGTGTTAT+GGG | 0.427563 | 5_1:-15590196 | Msa0719920:CDS |
| AGACGGTGATGAGAGCTTAA+TGG | 0.428034 | 5_1:-15593315 | Msa0719920:CDS |
| ATGGTGATTGGGAGAAAGAA+TGG | 0.429973 | 5_1:-15593253 | Msa0719920:CDS |
| TCAAAGGAGATCCAGTTTCC+TGG | 0.436396 | 5_1:-15590381 | Msa0719920:CDS |
| GGACTGCGTGTCCTTATTGT+TGG | 0.437314 | 5_1:-15593523 | Msa0719920:CDS |
| TGGTGATTGGGAGAAAGAAT+GGG | 0.441553 | 5_1:-15593252 | Msa0719920:CDS |
| TCCGGATTCGGATCCTTTGA+AGG | 0.442848 | 5_1:+15593913 | None:intergenic |
| GACACTAACTTTGATCAAGT+TGG | 0.443559 | 5_1:+15590743 | None:intergenic |
| TTTAGCACAAAGGTTTCTTT+GGG | 0.444047 | 5_1:-15591082 | Msa0719920:intron |
| GCGAGCTAGGTCACGGTTGA+CGG | 0.444956 | 5_1:+15593715 | None:intergenic |
| GATGAGGCGGTATACTCAAT+AGG | 0.446628 | 5_1:-15590097 | None:intergenic |
| GCTAGGGCTTCATCTTGAAA+AGG | 0.446713 | 5_1:+15593638 | None:intergenic |
| GCTGGCGGCGGTGAAGTTGC+GGG | 0.446897 | 5_1:+15593850 | None:intergenic |
| AGGCTTCACGAACACGAGCT+AGG | 0.447670 | 5_1:+15593621 | None:intergenic |
| GGTGTTGAAAATGAAGGTTT+GGG | 0.450241 | 5_1:-15590168 | Msa0719920:CDS |
| GAGGATTCGGCCGATTGAAT+CGG | 0.450460 | 5_1:+15593802 | None:intergenic |
| TTCAATTTGTCTGCCCCACC+AGG | 0.456050 | 5_1:+15590363 | None:intergenic |
| CCCTTCAAAGGATCCGAATC+CGG | 0.457042 | 5_1:-15593914 | Msa0719920:CDS |
| TTTCTGATGATGATGGTGAT+TGG | 0.457277 | 5_1:-15593265 | Msa0719920:CDS |
| ACGGGCGAAGTCGCTGGCGG+CGG | 0.460386 | 5_1:+15593838 | None:intergenic |
| ACGGTTGACGGATTCGAAGC+GGG | 0.464496 | 5_1:+15593727 | None:intergenic |
| TGGCACGTTCTCTCTGACCC+TGG | 0.465872 | 5_1:-15593599 | Msa0719920:CDS |
| TGGCGTAATGCTGGCGAGCT+AGG | 0.465975 | 5_1:+15593702 | None:intergenic |
| TAAGCGACGGGCGAAGTCGC+TGG | 0.467695 | 5_1:+15593832 | None:intergenic |
| TACCGCCTCATCTTAAAACT+TGG | 0.469951 | 5_1:+15590108 | None:intergenic |
| AGGGTCAGAGAGAACGTGCC+AGG | 0.471268 | 5_1:+15593601 | None:intergenic |
| TTGCGAATTTGGCGTAATGC+TGG | 0.474043 | 5_1:+15593693 | None:intergenic |
| TTCTGATGATGATGGTGATT+GGG | 0.476747 | 5_1:-15593264 | Msa0719920:CDS |
| CGTCTGCGATTGTGAGGATT+CGG | 0.480284 | 5_1:+15593789 | None:intergenic |
| TGATTTGGGTTTGGATGGAA+AGG | 0.486063 | 5_1:-15593075 | Msa0719920:CDS |
| TAGCTCGTGTTCGTGAAGCC+TGG | 0.493626 | 5_1:-15593619 | Msa0719920:CDS |
| TTCACTTCGTAAAATTTCAA+CGG | 0.498543 | 5_1:+15593338 | None:intergenic |
| GTTTATGTTTCTGATGATGA+TGG | 0.502811 | 5_1:-15593272 | Msa0719920:CDS |
| ATCTTGAAAAGGGAATTTCT+CGG | 0.504744 | 5_1:+15593649 | None:intergenic |
| GATATAGATGACATCAATCC+TGG | 0.505784 | 5_1:+15590279 | None:intergenic |
| GATTGATGCATGTTACGATC+GGG | 0.507973 | 5_1:+15593882 | None:intergenic |
| AGACGTAGAATGCGAATCAA+TGG | 0.510341 | 5_1:-15590795 | Msa0719920:CDS |
| GTTAAGTCACCGGTCAAAGT+TGG | 0.511734 | 5_1:-15593419 | Msa0719920:CDS |
| ATGATGTCTTTGTTGGGGTG+AGG | 0.511784 | 5_1:-15593022 | Msa0719920:intron |
| ACGGTTGCACCAACTTTGAC+CGG | 0.516013 | 5_1:+15593410 | None:intergenic |
| AGGGAATTTCTCGGAGCTAG+TGG | 0.518958 | 5_1:+15593658 | None:intergenic |
| CCCAAAATGAATCCCTTCAA+AGG | 0.526232 | 5_1:-15593926 | None:intergenic |
| GACGGAGTAGTGGTCGGTGG+CGG | 0.529646 | 5_1:+15593760 | None:intergenic |
| GGTAATGATTTGGGTTTGGA+TGG | 0.533953 | 5_1:-15593080 | Msa0719920:CDS |
| CTAGGGCTTCATCTTGAAAA+GGG | 0.534113 | 5_1:+15593639 | None:intergenic |
| AGGAAACTGGATCTCCTTTG+AGG | 0.538324 | 5_1:+15590383 | None:intergenic |
| CCGGATTCGGATCCTTTGAA+GGG | 0.540799 | 5_1:+15593914 | None:intergenic |
| GGCTTCACGAACACGAGCTA+GGG | 0.541101 | 5_1:+15593622 | None:intergenic |
| CAAAGTTGTTAAGGTTGAGA+TGG | 0.542500 | 5_1:-15590232 | Msa0719920:CDS |
| TTGGTGCAACCGTCGTAGAA+GGG | 0.545945 | 5_1:-15593400 | Msa0719920:CDS |
| AGATTGATGCATGTTACGAT+CGG | 0.548031 | 5_1:+15593881 | None:intergenic |
| GTCCAAGGTGTTGAAAATGA+AGG | 0.548376 | 5_1:-15590174 | Msa0719920:CDS |
| CGGAGCTAGTGGGATCTAAG+AGG | 0.548715 | 5_1:+15593669 | None:intergenic |
| AGTCCAAAACGCCGCGGTGG+CGG | 0.553070 | 5_1:+15593541 | None:intergenic |
| ATCGGAGAGTGGTAAGCGAC+GGG | 0.559389 | 5_1:+15593820 | None:intergenic |
| GGTGATTGGGAGAAAGAATG+GGG | 0.559947 | 5_1:-15593251 | Msa0719920:CDS |
| GATGCTGGTGTGAGAAATGA+AGG | 0.561224 | 5_1:-15593218 | Msa0719920:CDS |
| CGGCATGGCGGTTAAGTCAC+CGG | 0.563481 | 5_1:-15593429 | Msa0719920:CDS |
| TGTTGATGATGTCTTTGTTG+GGG | 0.565401 | 5_1:-15593027 | Msa0719920:CDS |
| GCTGTTTATGACCGCGGTGG+TGG | 0.566092 | 5_1:-15593569 | Msa0719920:CDS |
| TTACCACTCTCCGATTCAAT+CGG | 0.568472 | 5_1:-15593812 | Msa0719920:CDS |
| GGGAATTTCTCGGAGCTAGT+GGG | 0.573416 | 5_1:+15593659 | None:intergenic |
| GGAAAAGTGTAATGATGAGG+AGG | 0.576454 | 5_1:-15590337 | Msa0719920:CDS |
| TTGAGTTGTGAGGATAGACC+AGG | 0.582755 | 5_1:-15590297 | Msa0719920:CDS |
| GGAGATCCAGTTTCCTGGTG+GGG | 0.584829 | 5_1:-15590376 | Msa0719920:CDS |
| GGATCTCCTTTGAGGTAGCA+TGG | 0.586127 | 5_1:+15590391 | None:intergenic |
| AGCGGCAGTACTATAAGTGT+AGG | 0.586899 | 5_1:-15593370 | Msa0719920:CDS |
| AGAAGTGTGTTATGGGTCCA+AGG | 0.587934 | 5_1:-15590189 | Msa0719920:CDS |
| GAAACGATAAACGAAAGATG+AGG | 0.587943 | 5_1:-15593157 | Msa0719920:CDS |
| CATGTTCGAAATTACTGTAA+CGG | 0.590992 | 5_1:-15590951 | Msa0719920:CDS |
| CACTAACTTTGATCAAGTTG+GGG | 0.594450 | 5_1:+15590745 | None:intergenic |
| CGGTTGACGGATTCGAAGCG+GGG | 0.599356 | 5_1:+15593728 | None:intergenic |
| GCGGCAGTACTATAAGTGTA+GGG | 0.600023 | 5_1:-15593369 | Msa0719920:CDS |
| GGAGACTATCAAACAAGTGA+AGG | 0.601788 | 5_1:-15590451 | Msa0719920:CDS |
| AATGCTGGCGAGCTAGGTCA+CGG | 0.602108 | 5_1:+15593708 | None:intergenic |
| GGAGACGGAGGACGGAGTAG+TGG | 0.602128 | 5_1:+15593750 | None:intergenic |
| CGGTGAAGTTGCGGGCGGAG+AGG | 0.602692 | 5_1:+15593858 | None:intergenic |
| AAACGATAAACGAAAGATGA+GGG | 0.605453 | 5_1:-15593156 | Msa0719920:CDS |
| AGGAGATCCAGTTTCCTGGT+GGG | 0.605957 | 5_1:-15590377 | Msa0719920:CDS |
| TGGTGCAACCGTCGTAGAAG+GGG | 0.607788 | 5_1:-15593399 | Msa0719920:CDS |
| GTTGAGATGGTGACAGTGGG+TGG | 0.609342 | 5_1:-15590219 | Msa0719920:CDS |
| CACGGTTGACGGATTCGAAG+CGG | 0.610190 | 5_1:+15593726 | None:intergenic |
| GAAAAGTGTAATGATGAGGA+GGG | 0.610839 | 5_1:-15590336 | Msa0719920:CDS |
| TAAGGTTGAGATGGTGACAG+TGG | 0.619246 | 5_1:-15590223 | Msa0719920:CDS |
| TGTGAATTGGAGTTTACTGA+AGG | 0.619463 | 5_1:-15593050 | Msa0719920:CDS |
| CGCAGTCCAAAACGCCGCGG+TGG | 0.620611 | 5_1:+15593538 | None:intergenic |
| AATCGGAGAGTGGTAAGCGA+CGG | 0.620703 | 5_1:+15593819 | None:intergenic |
| GCGACGGGCGAAGTCGCTGG+CGG | 0.623502 | 5_1:+15593835 | None:intergenic |
| ACGGAGGACGGAGTAGTGGT+CGG | 0.624152 | 5_1:+15593754 | None:intergenic |
| TAACTTTGATCAAGTTGGGG+AGG | 0.625634 | 5_1:+15590748 | None:intergenic |
| GGACAAGGCATCAATACTAG+TGG | 0.628919 | 5_1:-15590472 | Msa0719920:CDS |
| CGGCCGATTGAATCGGAGAG+TGG | 0.629320 | 5_1:+15593809 | None:intergenic |
| TGCAACCGTCGTAGAAGGGG+AGG | 0.632359 | 5_1:-15593396 | Msa0719920:CDS |
| TCGTAGAAGGGGAGGAAAAG+CGG | 0.632435 | 5_1:-15593388 | Msa0719920:CDS |
| TATCTCGAAGCAAAGATCAA+AGG | 0.632574 | 5_1:-15590865 | Msa0719920:CDS |
| AGATAGCCATGCTACCTCAA+AGG | 0.632769 | 5_1:-15590397 | Msa0719920:CDS |
| AGAGCACGTCTGCGATTGTG+AGG | 0.638432 | 5_1:+15593783 | None:intergenic |
| TATTGATTGACAGAAGGACA+AGG | 0.644249 | 5_1:-15590487 | Msa0719920:intron |
| AAGGTTGAGATGGTGACAGT+GGG | 0.645311 | 5_1:-15590222 | Msa0719920:CDS |
| GAGGACGGAGTAGTGGTCGG+TGG | 0.645556 | 5_1:+15593757 | None:intergenic |
| AAGGAGATCCAGTTTCCTGG+TGG | 0.648546 | 5_1:-15590378 | Msa0719920:CDS |
| GGCGGCGGTGAAGTTGCGGG+CGG | 0.649993 | 5_1:+15593853 | None:intergenic |
| CTCGAAGCAAAGATCAAAGG+CGG | 0.651214 | 5_1:-15590862 | Msa0719920:CDS |
| AGTTGGGGAGGATACTGCGG+AGG | 0.655539 | 5_1:+15590760 | None:intergenic |
| GTGATTGGGAGAAAGAATGG+GGG | 0.664770 | 5_1:-15593250 | Msa0719920:CDS |
| TGAGAAGGTGAATCAAACAG+TGG | 0.667197 | 5_1:-15593192 | Msa0719920:CDS |
| GGTTGACGGATTCGAAGCGG+GGG | 0.670391 | 5_1:+15593729 | None:intergenic |
| TTTGGAAAAGTGTAATGATG+AGG | 0.678742 | 5_1:-15590340 | Msa0719920:CDS |
| CAAACAGTGGAAACAACGCA+AGG | 0.688821 | 5_1:-15593179 | Msa0719920:CDS |
| CGCGCTGTTTATGACCGCGG+TGG | 0.688930 | 5_1:-15593572 | Msa0719920:CDS |
| GAAAGCTACATTGAGTTGTG+AGG | 0.689461 | 5_1:-15590307 | Msa0719920:CDS |
| AAAGATGAGGGTGAAGACTG+TGG | 0.690035 | 5_1:-15593144 | Msa0719920:CDS |
| TCAAGTTGGGGAGGATACTG+CGG | 0.696028 | 5_1:+15590757 | None:intergenic |
| AAACGCGCTGTTTATGACCG+CGG | 0.715245 | 5_1:-15593575 | Msa0719920:CDS |
| GTTGGGGAGGATACTGCGGA+GGG | 0.717546 | 5_1:+15590761 | None:intergenic |
| TGGTGGTGTAACCGCCACCG+CGG | 0.724905 | 5_1:-15593552 | Msa0719920:CDS |
| ACACGCAGTCCAAAACGCCG+CGG | 0.773767 | 5_1:+15593535 | None:intergenic |
| TGGCGGTTACACCACCACCG+CGG | 0.784440 | 5_1:+15593558 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAAAATAACACTAA+AGG | - | chr5_1:15592545-15592564 | Msa0719920:intron | 10.0% |
| !!! | AGATAAAGTTTGTTAAATTT+TGG | - | chr5_1:15592024-15592043 | Msa0719920:intron | 15.0% |
| !! | AAATTAAACTGACTAAAAAT+AGG | - | chr5_1:15592454-15592473 | Msa0719920:intron | 15.0% |
| !! | CTAAAAAAAAACTATATAAC+AGG | + | chr5_1:15592501-15592520 | None:intergenic | 15.0% |
| !!! | GTTATATAGTTTTTTTTTAG+AGG | - | chr5_1:15592501-15592520 | Msa0719920:intron | 15.0% |
| !!! | TTTTATCTTCAATATCATTA+AGG | + | chr5_1:15592659-15592678 | None:intergenic | 15.0% |
| !!! | TGATTTGCAAAAATATATTT+TGG | + | chr5_1:15592702-15592721 | None:intergenic | 15.0% |
| !!! | AAATTTTGTTTTCATAAAGT+TGG | + | chr5_1:15593318-15593337 | None:intergenic | 15.0% |
| !!! | ATTTGATTTTGGTAATGATT+TGG | - | chr5_1:15590928-15590947 | Msa0719920:CDS | 20.0% |
| !!! | TTTGATTTTGGTAATGATTT+GGG | - | chr5_1:15590929-15590948 | Msa0719920:CDS | 20.0% |
| !! | ATTGAATAACTTAATCAGAA+AGG | + | chr5_1:15591301-15591320 | None:intergenic | 20.0% |
| !! | ATCAGAATTTGGTAAATAAT+GGG | + | chr5_1:15591767-15591786 | None:intergenic | 20.0% |
| !!! | TTAACTCTTTGTTTTTAAGT+AGG | - | chr5_1:15592248-15592267 | Msa0719920:intron | 20.0% |
| !!! | TATTTGGCTATTTTATAAGA+AGG | - | chr5_1:15592615-15592634 | Msa0719920:intron | 20.0% |
| !! | GAAACTCTATCTTATAAAAA+TGG | - | chr5_1:15592732-15592751 | Msa0719920:intron | 20.0% |
| !! | TCATTATGAACATTTAACAT+AGG | - | chr5_1:15592775-15592794 | Msa0719920:intron | 20.0% |
| !!! | AGGATTTTGAAATTAATGTT+GGG | + | chr5_1:15592807-15592826 | None:intergenic | 20.0% |
| !!! | TAGGATTTTGAAATTAATGT+TGG | + | chr5_1:15592808-15592827 | None:intergenic | 20.0% |
| !!! | TTTTAGTAAAACACAATGAA+AGG | + | chr5_1:15593024-15593043 | None:intergenic | 20.0% |
| !!! | TTATACTTTTGTGTATTACA+AGG | - | chr5_1:15593339-15593358 | Msa0719920:CDS | 20.0% |
| !! | AACAAATTCTAAATTTAGCA+AGG | + | chr5_1:15593512-15593531 | None:intergenic | 20.0% |
| ! | TGATACAAATTCCAACAATA+AGG | + | chr5_1:15590509-15590528 | None:intergenic | 25.0% |
| !! | ACTTGTAAGAAAACTTTTCA+CGG | - | chr5_1:15590569-15590588 | Msa0719920:intron | 25.0% |
| ! | TTCACTTCGTAAAATTTCAA+CGG | + | chr5_1:15590683-15590702 | None:intergenic | 25.0% |
| !! | AAATTTTACGAAGTGAAAGA+CGG | - | chr5_1:15590686-15590705 | Msa0719920:intron | 25.0% |
| !!! | AGAATGACAAGATTTGATTT+TGG | - | chr5_1:15590917-15590936 | Msa0719920:CDS | 25.0% |
| !! | TGTTTTGCATAGATAGATTT+TGG | - | chr5_1:15591120-15591139 | Msa0719920:intron | 25.0% |
| !! | GTTTTGCATAGATAGATTTT+GGG | - | chr5_1:15591121-15591140 | Msa0719920:intron | 25.0% |
| ! | AAAAAGTGGCATTACAAAAA+TGG | + | chr5_1:15591240-15591259 | None:intergenic | 25.0% |
| !!! | CAAACATCTTTGAAATTGTA+AGG | - | chr5_1:15591441-15591460 | Msa0719920:intron | 25.0% |
| ! | TGTATTTGCAAATTCAAAGT+TGG | - | chr5_1:15591681-15591700 | Msa0719920:intron | 25.0% |
| ! | GATCAGAATTTGGTAAATAA+TGG | + | chr5_1:15591768-15591787 | None:intergenic | 25.0% |
| ! | GAACAATCAAAATAAGAATG+TGG | + | chr5_1:15591824-15591843 | None:intergenic | 25.0% |
| ! | TTGGAATATAAATTTCAGCT+GGG | + | chr5_1:15591881-15591900 | None:intergenic | 25.0% |
| !! | ATCATTTAGTTTATGCAGAT+TGG | + | chr5_1:15591978-15591997 | None:intergenic | 25.0% |
| ! | AATCTGCATAAACTAAATGA+TGG | - | chr5_1:15591977-15591996 | Msa0719920:intron | 25.0% |
| ! | ATCTGCATAAACTAAATGAT+GGG | - | chr5_1:15591978-15591997 | Msa0719920:intron | 25.0% |
| !! | GTGAAGTTTTTAATAAAGAG+TGG | - | chr5_1:15592046-15592065 | Msa0719920:intron | 25.0% |
| !! | TGAATCATTCACACAAATTT+TGG | + | chr5_1:15592093-15592112 | None:intergenic | 25.0% |
| ! | AAAGTAAGGACATTAAGTTT+CGG | - | chr5_1:15592121-15592140 | Msa0719920:intron | 25.0% |
| ! | AGTCTCAACAATATTCATAA+GGG | + | chr5_1:15592275-15592294 | None:intergenic | 25.0% |
| ! | TAGTCTCAACAATATTCATA+AGG | + | chr5_1:15592276-15592295 | None:intergenic | 25.0% |
| !!! | TTATTTTAGAACTGTACAAC+AGG | + | chr5_1:15592531-15592550 | None:intergenic | 25.0% |
| ! | TACTAAAATAGTTAGAACAC+AGG | - | chr5_1:15593036-15593055 | Msa0719920:CDS | 25.0% |
| ! | ACTAAAATAGTTAGAACACA+GGG | - | chr5_1:15593037-15593056 | Msa0719920:CDS | 25.0% |
| ! | ACTATTATTGTAAGGAAGAA+TGG | - | chr5_1:15593389-15593408 | Msa0719920:CDS | 25.0% |
| ! | AATGGTTAAATATGTTGATG+TGG | - | chr5_1:15593407-15593426 | Msa0719920:CDS | 25.0% |
| ! | TAAATTTAGCAAGGTTGTTT+AGG | + | chr5_1:15593503-15593522 | None:intergenic | 25.0% |
| !!! | ATTTGTTATTGATTGACAGA+AGG | - | chr5_1:15593525-15593544 | Msa0719920:CDS | 25.0% |
| ATCTTGAAAAGGGAATTTCT+CGG | + | chr5_1:15590372-15590391 | None:intergenic | 30.0% | |
| ! | GTTTATGTTTCTGATGATGA+TGG | - | chr5_1:15590746-15590765 | Msa0719920:intron | 30.0% |
| AAACGATAAACGAAAGATGA+GGG | - | chr5_1:15590862-15590881 | Msa0719920:CDS | 30.0% | |
| !!! | TTTTGGTAATGATTTGGGTT+TGG | - | chr5_1:15590934-15590953 | Msa0719920:CDS | 30.0% |
| AATGGGTGATAGAAATGTTA+AGG | - | chr5_1:15591022-15591041 | Msa0719920:intron | 30.0% | |
| ATGGGTGATAGAAATGTTAA+GGG | - | chr5_1:15591023-15591042 | Msa0719920:intron | 30.0% | |
| TTTGAATTGATGCATCTTAG+TGG | - | chr5_1:15591188-15591207 | Msa0719920:intron | 30.0% | |
| TTGAATTGATGCATCTTAGT+GGG | - | chr5_1:15591189-15591208 | Msa0719920:intron | 30.0% | |
| TCAAACAGTTCAAGAAAAAG+TGG | + | chr5_1:15591254-15591273 | None:intergenic | 30.0% | |
| ATTCGAGGAAATCTTCAATT+TGG | - | chr5_1:15591391-15591410 | Msa0719920:intron | 30.0% | |
| TTTGACGAAAATGATCAAAC+TGG | + | chr5_1:15591473-15591492 | None:intergenic | 30.0% | |
| ATACATGATGAAAGAATTGC+AGG | + | chr5_1:15591666-15591685 | None:intergenic | 30.0% | |
| ! | GAATTTGGTAAATAATGGGA+AGG | + | chr5_1:15591763-15591782 | None:intergenic | 30.0% |
| AAATAAGAATGTGGCTATTG+AGG | + | chr5_1:15591815-15591834 | None:intergenic | 30.0% | |
| GTTGGAATATAAATTTCAGC+TGG | + | chr5_1:15591882-15591901 | None:intergenic | 30.0% | |
| TCTGCATAAACTAAATGATG+GGG | - | chr5_1:15591979-15591998 | Msa0719920:intron | 30.0% | |
| GAATATTGTTGAGACTAAAG+AGG | - | chr5_1:15592279-15592298 | Msa0719920:intron | 30.0% | |
| ATGTCTTTAGTGCAACTATT+TGG | - | chr5_1:15592599-15592618 | Msa0719920:intron | 30.0% | |
| AATCAAAGAGACTTTATGGT+AGG | + | chr5_1:15592827-15592846 | None:intergenic | 30.0% | |
| AGCAAATCAAAGAGACTTTA+TGG | + | chr5_1:15592831-15592850 | None:intergenic | 30.0% | |
| ATGCAATTACAACAAAAGCA+AGG | + | chr5_1:15592903-15592922 | None:intergenic | 30.0% | |
| ! | TTTTAGCACAAAGGTTTCTT+TGG | - | chr5_1:15592935-15592954 | Msa0719920:intron | 30.0% |
| TTTAGCACAAAGGTTTCTTT+GGG | - | chr5_1:15592936-15592955 | Msa0719920:intron | 30.0% | |
| CATGTTCGAAATTACTGTAA+CGG | - | chr5_1:15593067-15593086 | Msa0719920:CDS | 30.0% | |
| ACACTAACTTTGATCAAGTT+GGG | + | chr5_1:15593277-15593296 | None:intergenic | 30.0% | |
| TTGCGATCACTATTATTGTA+AGG | - | chr5_1:15593381-15593400 | Msa0719920:CDS | 30.0% | |
| ! | TTTGGAAAAGTGTAATGATG+AGG | - | chr5_1:15593678-15593697 | Msa0719920:CDS | 30.0% |
| AATGAAAGCCAAAGTTGTTA+AGG | - | chr5_1:15593777-15593796 | Msa0719920:CDS | 30.0% | |
| !!! | ATAAGCCAAGTTTTAAGATG+AGG | - | chr5_1:15593905-15593924 | Msa0719920:CDS | 30.0% |
| AGATTGATGCATGTTACGAT+CGG | + | chr5_1:15590140-15590159 | None:intergenic | 35.0% | |
| ATCTAAGAGGATTGCGAATT+TGG | + | chr5_1:15590339-15590358 | None:intergenic | 35.0% | |
| ! | TAAGAAAACTTTTCACGGCA+TGG | - | chr5_1:15590574-15590593 | Msa0719920:intron | 35.0% |
| !! | TTTCTGATGATGATGGTGAT+TGG | - | chr5_1:15590753-15590772 | Msa0719920:CDS | 35.0% |
| !! | TTCTGATGATGATGGTGATT+GGG | - | chr5_1:15590754-15590773 | Msa0719920:CDS | 35.0% |
| !!! | GAGAAATGAAGGTTTTGAGA+AGG | - | chr5_1:15590811-15590830 | Msa0719920:CDS | 35.0% |
| GAAACGATAAACGAAAGATG+AGG | - | chr5_1:15590861-15590880 | Msa0719920:CDS | 35.0% | |
| TGTGAATTGGAGTTTACTGA+AGG | - | chr5_1:15590968-15590987 | Msa0719920:intron | 35.0% | |
| !! | GTGTTGATGATGTCTTTGTT+GGG | - | chr5_1:15590990-15591009 | Msa0719920:intron | 35.0% |
| !! | TGTTGATGATGTCTTTGTTG+GGG | - | chr5_1:15590991-15591010 | Msa0719920:intron | 35.0% |
| !!! | GGGAAGTTTTTGTTGTTCTT+TGG | - | chr5_1:15591043-15591062 | Msa0719920:intron | 35.0% |
| !!! | GTTTTTGTTGTTCTTTGGCT+AGG | - | chr5_1:15591048-15591067 | Msa0719920:intron | 35.0% |
| TAGGTCTAGTGGTATGATAT+AGG | - | chr5_1:15591067-15591086 | Msa0719920:CDS | 35.0% | |
| ! | TTGCATAGATAGATTTTGGG+AGG | - | chr5_1:15591124-15591143 | Msa0719920:intron | 35.0% |
| TGAATTGATGCATCTTAGTG+GGG | - | chr5_1:15591190-15591209 | Msa0719920:intron | 35.0% | |
| ! | TGTTCTTGCTATGACTGAAT+TGG | - | chr5_1:15591335-15591354 | Msa0719920:intron | 35.0% |
| TCATGTTGTGATAGTTTCTC+TGG | - | chr5_1:15591361-15591380 | Msa0719920:intron | 35.0% | |
| !! | TTCTCTGGAGATTTTATTCG+AGG | - | chr5_1:15591376-15591395 | Msa0719920:intron | 35.0% |
| ACGAAAATGATCAAACTGGT+TGG | + | chr5_1:15591469-15591488 | None:intergenic | 35.0% | |
| !! | GTTACAATGCATTAGCTCTA+TGG | - | chr5_1:15591500-15591519 | Msa0719920:intron | 35.0% |
| TTTACCAAATTCTGATCCCT+AGG | - | chr5_1:15591771-15591790 | Msa0719920:intron | 35.0% | |
| !! | AGAGTAGTGCTTTAAGAAGT+TGG | + | chr5_1:15591900-15591919 | None:intergenic | 35.0% |
| TGTGTGAATGATTCAGTGAA+TGG | - | chr5_1:15592098-15592117 | Msa0719920:intron | 35.0% | |
| GATTCAGTGAATGGAAAGTA+AGG | - | chr5_1:15592107-15592126 | Msa0719920:intron | 35.0% | |
| AAATGAATTAGCTACTGCCA+TGG | - | chr5_1:15592146-15592165 | Msa0719920:intron | 35.0% | |
| ! | AGGTTACAGAGCTTTTGATA+AGG | - | chr5_1:15592191-15592210 | Msa0719920:intron | 35.0% |
| ! | GGTTACAGAGCTTTTGATAA+GGG | - | chr5_1:15592192-15592211 | Msa0719920:intron | 35.0% |
| ! | GTTACAGAGCTTTTGATAAG+GGG | - | chr5_1:15592193-15592212 | Msa0719920:intron | 35.0% |
| ACAACAAAAGCAAGGAAGAT+AGG | + | chr5_1:15592895-15592914 | None:intergenic | 35.0% | |
| AGAAACCTTTGTGCTAAAAG+AGG | + | chr5_1:15592934-15592953 | None:intergenic | 35.0% | |
| !! | CAAAATGGTTTTACTTCGAC+AGG | - | chr5_1:15592962-15592981 | Msa0719920:intron | 35.0% |
| TATCTCGAAGCAAAGATCAA+AGG | - | chr5_1:15593153-15593172 | Msa0719920:CDS | 35.0% | |
| ! | CACTAACTTTGATCAAGTTG+GGG | + | chr5_1:15593276-15593295 | None:intergenic | 35.0% |
| GACACTAACTTTGATCAAGT+TGG | + | chr5_1:15593278-15593297 | None:intergenic | 35.0% | |
| ! | TATTGATTGACAGAAGGACA+AGG | - | chr5_1:15593531-15593550 | Msa0719920:CDS | 35.0% |
| ! | GAAAAGTGTAATGATGAGGA+GGG | - | chr5_1:15593682-15593701 | Msa0719920:CDS | 35.0% |
| GATATAGATGACATCAATCC+TGG | + | chr5_1:15593742-15593761 | None:intergenic | 35.0% | |
| CATCTCAACCTTAACAACTT+TGG | + | chr5_1:15593788-15593807 | None:intergenic | 35.0% | |
| CAAAGTTGTTAAGGTTGAGA+TGG | - | chr5_1:15593786-15593805 | Msa0719920:CDS | 35.0% | |
| ! | AAGAACCAGAAGTGTGTTAT+GGG | - | chr5_1:15593822-15593841 | Msa0719920:CDS | 35.0% |
| ! | AACCTTCATTTTCAACACCT+TGG | + | chr5_1:15593849-15593868 | None:intergenic | 35.0% |
| !! | AGGTGTTGAAAATGAAGGTT+TGG | - | chr5_1:15593849-15593868 | Msa0719920:CDS | 35.0% |
| ! | GGTGTTGAAAATGAAGGTTT+GGG | - | chr5_1:15593850-15593869 | Msa0719920:CDS | 35.0% |
| GATTGATGCATGTTACGATC+GGG | + | chr5_1:15590139-15590158 | None:intergenic | 40.0% | |
| TTACCACTCTCCGATTCAAT+CGG | - | chr5_1:15590206-15590225 | Msa0719920:CDS | 40.0% | |
| CTAGGGCTTCATCTTGAAAA+GGG | + | chr5_1:15590382-15590401 | None:intergenic | 40.0% | |
| ATGGTGATTGGGAGAAAGAA+TGG | - | chr5_1:15590765-15590784 | Msa0719920:CDS | 40.0% | |
| TGGTGATTGGGAGAAAGAAT+GGG | - | chr5_1:15590766-15590785 | Msa0719920:CDS | 40.0% | |
| TGAGAAGGTGAATCAAACAG+TGG | - | chr5_1:15590826-15590845 | Msa0719920:CDS | 40.0% | |
| ! | GGTAATGATTTGGGTTTGGA+TGG | - | chr5_1:15590938-15590957 | Msa0719920:CDS | 40.0% |
| ! | TGATTTGGGTTTGGATGGAA+AGG | - | chr5_1:15590943-15590962 | Msa0719920:CDS | 40.0% |
| GGATGGAAAGGATTGTGAAT+TGG | - | chr5_1:15590955-15590974 | Msa0719920:CDS | 40.0% | |
| !! | GGTGTTGATGATGTCTTTGT+TGG | - | chr5_1:15590989-15591008 | Msa0719920:intron | 40.0% |
| AGGAGAAAAATGACTGATGG+AGG | - | chr5_1:15591144-15591163 | Msa0719920:intron | 40.0% | |
| TCATCTTCATCTTTCCCCTT+CGG | - | chr5_1:15591595-15591614 | Msa0719920:intron | 40.0% | |
| ! | GTTACAAAGCTTTTCCGAAG+GGG | + | chr5_1:15591612-15591631 | None:intergenic | 40.0% |
| ! | GGTTACAAAGCTTTTCCGAA+GGG | + | chr5_1:15591613-15591632 | None:intergenic | 40.0% |
| ! | AGGTTACAAAGCTTTTCCGA+AGG | + | chr5_1:15591614-15591633 | None:intergenic | 40.0% |
| AGGCTGTGGTAAACTCAAAT+GGG | + | chr5_1:15591719-15591738 | None:intergenic | 40.0% | |
| CATGACTAGAGAAGGTGAAT+AGG | - | chr5_1:15592171-15592190 | Msa0719920:intron | 40.0% | |
| ! | ACTTGCCTCTTTTAGCACAA+AGG | - | chr5_1:15592926-15592945 | Msa0719920:intron | 40.0% |
| ! | GGTTTCTTTGGGAAGCAAAA+TGG | - | chr5_1:15592947-15592966 | Msa0719920:intron | 40.0% |
| AGACGTAGAATGCGAATCAA+TGG | - | chr5_1:15593223-15593242 | Msa0719920:CDS | 40.0% | |
| !! | TAACTTTGATCAAGTTGGGG+AGG | + | chr5_1:15593273-15593292 | None:intergenic | 40.0% |
| TCACGATGCAGTCTAAATCA+TGG | - | chr5_1:15593442-15593461 | Msa0719920:CDS | 40.0% | |
| GGAGACTATCAAACAAGTGA+AGG | - | chr5_1:15593567-15593586 | Msa0719920:CDS | 40.0% | |
| TGGGGCAGACAAATTGAATT+TGG | - | chr5_1:15593660-15593679 | Msa0719920:CDS | 40.0% | |
| ! | GGAAAAGTGTAATGATGAGG+AGG | - | chr5_1:15593681-15593700 | Msa0719920:CDS | 40.0% |
| ! | GAAAGCTACATTGAGTTGTG+AGG | - | chr5_1:15593711-15593730 | Msa0719920:CDS | 40.0% |
| ! | GAAGAACCAGAAGTGTGTTA+TGG | - | chr5_1:15593821-15593840 | Msa0719920:CDS | 40.0% |
| !! | GTCCAAGGTGTTGAAAATGA+AGG | - | chr5_1:15593844-15593863 | Msa0719920:CDS | 40.0% |
| !!! | AGCCAAGTTTTAAGATGAGG+CGG | - | chr5_1:15593908-15593927 | Msa0719920:CDS | 40.0% |
| TACCGCCTCATCTTAAAACT+TGG | + | chr5_1:15593913-15593932 | None:intergenic | 40.0% | |
| ! | GCATGTTACGATCGGGTTTT+CGG | + | chr5_1:15590132-15590151 | None:intergenic | 45.0% |
| TTGCGAATTTGGCGTAATGC+TGG | + | chr5_1:15590328-15590347 | None:intergenic | 45.0% | |
| GCTAGGGCTTCATCTTGAAA+AGG | + | chr5_1:15590383-15590402 | None:intergenic | 45.0% | |
| ! | CATAAACAGCGCGTTTTCCA+GGG | + | chr5_1:15590439-15590458 | None:intergenic | 45.0% |
| ! | TCATAAACAGCGCGTTTTCC+AGG | + | chr5_1:15590440-15590459 | None:intergenic | 45.0% |
| ! | GAAAACTTTTCACGGCATGG+CGG | - | chr5_1:15590577-15590596 | Msa0719920:intron | 45.0% |
| GTTAAGTCACCGGTCAAAGT+TGG | - | chr5_1:15590599-15590618 | Msa0719920:intron | 45.0% | |
| AGCGGCAGTACTATAAGTGT+AGG | - | chr5_1:15590648-15590667 | Msa0719920:intron | 45.0% | |
| GCGGCAGTACTATAAGTGTA+GGG | - | chr5_1:15590649-15590668 | Msa0719920:intron | 45.0% | |
| AGACGGTGATGAGAGCTTAA+TGG | - | chr5_1:15590703-15590722 | Msa0719920:intron | 45.0% | |
| GACGGTGATGAGAGCTTAAT+GGG | - | chr5_1:15590704-15590723 | Msa0719920:intron | 45.0% | |
| GGTGATTGGGAGAAAGAATG+GGG | - | chr5_1:15590767-15590786 | Msa0719920:CDS | 45.0% | |
| GTGATTGGGAGAAAGAATGG+GGG | - | chr5_1:15590768-15590787 | Msa0719920:CDS | 45.0% | |
| GAGAAAGAATGGGGGAATGT+GGG | - | chr5_1:15590776-15590795 | Msa0719920:CDS | 45.0% | |
| GATGCTGGTGTGAGAAATGA+AGG | - | chr5_1:15590800-15590819 | Msa0719920:CDS | 45.0% | |
| CAAACAGTGGAAACAACGCA+AGG | - | chr5_1:15590839-15590858 | Msa0719920:CDS | 45.0% | |
| AAAGATGAGGGTGAAGACTG+TGG | - | chr5_1:15590874-15590893 | Msa0719920:CDS | 45.0% | |
| ATGATGTCTTTGTTGGGGTG+AGG | - | chr5_1:15590996-15591015 | Msa0719920:intron | 45.0% | |
| TTTGTTGGGGTGAGGTACAA+TGG | - | chr5_1:15591004-15591023 | Msa0719920:intron | 45.0% | |
| TTGTTGGGGTGAGGTACAAT+GGG | - | chr5_1:15591005-15591024 | Msa0719920:intron | 45.0% | |
| TGTTCTTTGGCTAGGTCTAG+TGG | - | chr5_1:15591056-15591075 | Msa0719920:intron | 45.0% | |
| GGGAGGAGAAAAATGACTGA+TGG | - | chr5_1:15591141-15591160 | Msa0719920:intron | 45.0% | |
| ATTGATGCATCTTAGTGGGG+AGG | - | chr5_1:15591193-15591212 | Msa0719920:intron | 45.0% | |
| TTAGCGAGTCACGTCTTTGA+TGG | - | chr5_1:15591526-15591545 | Msa0719920:intron | 45.0% | |
| CCACAAAGAAGGTGAAGAAG+AGG | + | chr5_1:15591634-15591653 | None:intergenic | 45.0% | |
| CCTCTTCTTCACCTTCTTTG+TGG | - | chr5_1:15591631-15591650 | Msa0719920:intron | 45.0% | |
| CTTCTTCACCTTCTTTGTGG+TGG | - | chr5_1:15591634-15591653 | Msa0719920:intron | 45.0% | |
| GGCTGTGGTAAACTCAAATG+GGG | + | chr5_1:15591718-15591737 | None:intergenic | 45.0% | |
| GAGGCTGTGGTAAACTCAAA+TGG | + | chr5_1:15591720-15591739 | None:intergenic | 45.0% | |
| !! | TGAGCATGCTAGTCTTTCTG+AGG | + | chr5_1:15591739-15591758 | None:intergenic | 45.0% |
| AGCTCCTAGGGATCAGAATT+TGG | + | chr5_1:15591778-15591797 | None:intergenic | 45.0% | |
| AGAGAAACAGACAGCTCCTA+GGG | + | chr5_1:15591790-15591809 | None:intergenic | 45.0% | |
| TAGAGAAACAGACAGCTCCT+AGG | + | chr5_1:15591791-15591810 | None:intergenic | 45.0% | |
| CCTTCTCTAGTCATGTTCCA+TGG | + | chr5_1:15592166-15592185 | None:intergenic | 45.0% | |
| CCATGGAACATGACTAGAGA+AGG | - | chr5_1:15592163-15592182 | Msa0719920:intron | 45.0% | |
| ! | CAGAGCTTTTGATAAGGGGA+AGG | - | chr5_1:15592197-15592216 | Msa0719920:intron | 45.0% |
| AGGGGAAGGATGAAGATGAA+TGG | - | chr5_1:15592211-15592230 | Msa0719920:intron | 45.0% | |
| GGGGAAGGATGAAGATGAAT+GGG | - | chr5_1:15592212-15592231 | Msa0719920:intron | 45.0% | |
| CTCGAAGCAAAGATCAAAGG+CGG | - | chr5_1:15593156-15593175 | Msa0719920:CDS | 45.0% | |
| ! | GGACAAGGCATCAATACTAG+TGG | - | chr5_1:15593546-15593565 | Msa0719920:CDS | 45.0% |
| AGATAGCCATGCTACCTCAA+AGG | - | chr5_1:15593621-15593640 | Msa0719920:CDS | 45.0% | |
| AGGAAACTGGATCTCCTTTG+AGG | + | chr5_1:15593638-15593657 | None:intergenic | 45.0% | |
| TCAAAGGAGATCCAGTTTCC+TGG | - | chr5_1:15593637-15593656 | Msa0719920:CDS | 45.0% | |
| ! | TTGAGTTGTGAGGATAGACC+AGG | - | chr5_1:15593721-15593740 | Msa0719920:CDS | 45.0% |
| TAAGGTTGAGATGGTGACAG+TGG | - | chr5_1:15593795-15593814 | Msa0719920:CDS | 45.0% | |
| AAGGTTGAGATGGTGACAGT+GGG | - | chr5_1:15593796-15593815 | Msa0719920:CDS | 45.0% | |
| TTGGACCCATAACACACTTC+TGG | + | chr5_1:15593830-15593849 | None:intergenic | 45.0% | |
| ! | AGAAGTGTGTTATGGGTCCA+AGG | - | chr5_1:15593829-15593848 | Msa0719920:CDS | 45.0% |
| CCGGATTCGGATCCTTTGAA+GGG | + | chr5_1:15590107-15590126 | None:intergenic | 50.0% | |
| CCCTTCAAAGGATCCGAATC+CGG | - | chr5_1:15590104-15590123 | Msa0719920:CDS | 50.0% | |
| TCCGGATTCGGATCCTTTGA+AGG | + | chr5_1:15590108-15590127 | None:intergenic | 50.0% | |
| ! | TACGATCGGGTTTTCGGATC+CGG | + | chr5_1:15590126-15590145 | None:intergenic | 50.0% |
| AATCGGAGAGTGGTAAGCGA+CGG | + | chr5_1:15590202-15590221 | None:intergenic | 50.0% | |
| GAGGATTCGGCCGATTGAAT+CGG | + | chr5_1:15590219-15590238 | None:intergenic | 50.0% | |
| CGTCTGCGATTGTGAGGATT+CGG | + | chr5_1:15590232-15590251 | None:intergenic | 50.0% | |
| GGGAATTTCTCGGAGCTAGT+GGG | + | chr5_1:15590362-15590381 | None:intergenic | 50.0% | |
| AGGGAATTTCTCGGAGCTAG+TGG | + | chr5_1:15590363-15590382 | None:intergenic | 50.0% | |
| AAACGCGCTGTTTATGACCG+CGG | - | chr5_1:15590443-15590462 | Msa0719920:CDS | 50.0% | |
| GGACTGCGTGTCCTTATTGT+TGG | - | chr5_1:15590495-15590514 | Msa0719920:intron | 50.0% | |
| ACGGTTGCACCAACTTTGAC+CGG | + | chr5_1:15590611-15590630 | None:intergenic | 50.0% | |
| TTGGTGCAACCGTCGTAGAA+GGG | - | chr5_1:15590618-15590637 | Msa0719920:intron | 50.0% | |
| ! | CTTTTCCTCCCCTTCTACGA+CGG | + | chr5_1:15590630-15590649 | None:intergenic | 50.0% |
| TCGTAGAAGGGGAGGAAAAG+CGG | - | chr5_1:15590630-15590649 | Msa0719920:intron | 50.0% | |
| GGAGAAAGAATGGGGGAATG+TGG | - | chr5_1:15590775-15590794 | Msa0719920:CDS | 50.0% | |
| !! | ACGTCTTTGATGGCGTCGTA+GGG | - | chr5_1:15591536-15591555 | Msa0719920:intron | 50.0% |
| !! | TGCTAGTCTTTCTGAGGCTG+TGG | + | chr5_1:15591733-15591752 | None:intergenic | 50.0% |
| TCCTTCTCATGCCTCCATCT+AGG | - | chr5_1:15591849-15591868 | Msa0719920:intron | 50.0% | |
| !! | TCAAGTTGGGGAGGATACTG+CGG | + | chr5_1:15593264-15593283 | None:intergenic | 50.0% |
| !! | GGATCTCCTTTGAGGTAGCA+TGG | + | chr5_1:15593630-15593649 | None:intergenic | 50.0% |
| AAGGAGATCCAGTTTCCTGG+TGG | - | chr5_1:15593640-15593659 | Msa0719920:CDS | 50.0% | |
| AGGAGATCCAGTTTCCTGGT+GGG | - | chr5_1:15593641-15593660 | Msa0719920:CDS | 50.0% | |
| TTCAATTTGTCTGCCCCACC+AGG | + | chr5_1:15593658-15593677 | None:intergenic | 50.0% | |
| ! | CGGGTTTTCGGATCCGGATT+CGG | + | chr5_1:15590120-15590139 | None:intergenic | 55.0% |
| ATCGGAGAGTGGTAAGCGAC+GGG | + | chr5_1:15590201-15590220 | None:intergenic | 55.0% | |
| AGAGCACGTCTGCGATTGTG+AGG | + | chr5_1:15590238-15590257 | None:intergenic | 55.0% | |
| !! | ACGGTTGACGGATTCGAAGC+GGG | + | chr5_1:15590294-15590313 | None:intergenic | 55.0% |
| !! | CACGGTTGACGGATTCGAAG+CGG | + | chr5_1:15590295-15590314 | None:intergenic | 55.0% |
| AATGCTGGCGAGCTAGGTCA+CGG | + | chr5_1:15590313-15590332 | None:intergenic | 55.0% | |
| CGGAGCTAGTGGGATCTAAG+AGG | + | chr5_1:15590352-15590371 | None:intergenic | 55.0% | |
| GGCTTCACGAACACGAGCTA+GGG | + | chr5_1:15590399-15590418 | None:intergenic | 55.0% | |
| AGGCTTCACGAACACGAGCT+AGG | + | chr5_1:15590400-15590419 | None:intergenic | 55.0% | |
| TAGCTCGTGTTCGTGAAGCC+TGG | - | chr5_1:15590399-15590418 | Msa0719920:CDS | 55.0% | |
| GTTGGTGCAACCGTCGTAGA+AGG | - | chr5_1:15590617-15590636 | Msa0719920:intron | 55.0% | |
| TGGTGCAACCGTCGTAGAAG+GGG | - | chr5_1:15590619-15590638 | Msa0719920:intron | 55.0% | |
| !! | CACGTCTTTGATGGCGTCGT+AGG | - | chr5_1:15591535-15591554 | Msa0719920:intron | 55.0% |
| CGTCGTAGGGACTGAATCGA+AGG | - | chr5_1:15591549-15591568 | Msa0719920:intron | 55.0% | |
| GGATGACGCCACCACAAAGA+AGG | + | chr5_1:15591645-15591664 | None:intergenic | 55.0% | |
| ! | GCCTAGATGGAGGCATGAGA+AGG | + | chr5_1:15591853-15591872 | None:intergenic | 55.0% |
| CTGGGTAGATGCCTAGATGG+AGG | + | chr5_1:15591863-15591882 | None:intergenic | 55.0% | |
| CAGCTGGGTAGATGCCTAGA+TGG | + | chr5_1:15591866-15591885 | None:intergenic | 55.0% | |
| GGAGATCCAGTTTCCTGGTG+GGG | - | chr5_1:15593642-15593661 | Msa0719920:CDS | 55.0% | |
| GTTGAGATGGTGACAGTGGG+TGG | - | chr5_1:15593799-15593818 | Msa0719920:CDS | 55.0% | |
| CGGCCGATTGAATCGGAGAG+TGG | + | chr5_1:15590212-15590231 | None:intergenic | 60.0% | |
| ACGGAGGACGGAGTAGTGGT+CGG | + | chr5_1:15590267-15590286 | None:intergenic | 60.0% | |
| !! | GGTTGACGGATTCGAAGCGG+GGG | + | chr5_1:15590292-15590311 | None:intergenic | 60.0% |
| !! | CGGTTGACGGATTCGAAGCG+GGG | + | chr5_1:15590293-15590312 | None:intergenic | 60.0% |
| GCGAGCTAGGTCACGGTTGA+CGG | + | chr5_1:15590306-15590325 | None:intergenic | 60.0% | |
| TGGCGTAATGCTGGCGAGCT+AGG | + | chr5_1:15590319-15590338 | None:intergenic | 60.0% | |
| AGGGTCAGAGAGAACGTGCC+AGG | + | chr5_1:15590420-15590439 | None:intergenic | 60.0% | |
| TGGCACGTTCTCTCTGACCC+TGG | - | chr5_1:15590419-15590438 | Msa0719920:CDS | 60.0% | |
| GCTGTTTATGACCGCGGTGG+TGG | - | chr5_1:15590449-15590468 | Msa0719920:CDS | 60.0% | |
| ACACGCAGTCCAAAACGCCG+CGG | + | chr5_1:15590486-15590505 | None:intergenic | 60.0% | |
| CGGCATGGCGGTTAAGTCAC+CGG | - | chr5_1:15590589-15590608 | Msa0719920:intron | 60.0% | |
| TGCAACCGTCGTAGAAGGGG+AGG | - | chr5_1:15590622-15590641 | Msa0719920:intron | 60.0% | |
| TGGGGGAATGTGGGTGATGC+TGG | - | chr5_1:15590785-15590804 | Msa0719920:CDS | 60.0% | |
| GTTGGGGAGGATACTGCGGA+GGG | + | chr5_1:15593260-15593279 | None:intergenic | 60.0% | |
| AGTTGGGGAGGATACTGCGG+AGG | + | chr5_1:15593261-15593280 | None:intergenic | 60.0% | |
| TGTCTGCCCCACCAGGAAAC+TGG | + | chr5_1:15593651-15593670 | None:intergenic | 60.0% | |
| TAAGCGACGGGCGAAGTCGC+TGG | + | chr5_1:15590189-15590208 | None:intergenic | 65.0% | |
| GACGGAGTAGTGGTCGGTGG+CGG | + | chr5_1:15590261-15590280 | None:intergenic | 65.0% | |
| GAGGACGGAGTAGTGGTCGG+TGG | + | chr5_1:15590264-15590283 | None:intergenic | 65.0% | |
| GGAGACGGAGGACGGAGTAG+TGG | + | chr5_1:15590271-15590290 | None:intergenic | 65.0% | |
| ATTCGAAGCGGGGGAGACGG+AGG | + | chr5_1:15590283-15590302 | None:intergenic | 65.0% | |
| CGGATTCGAAGCGGGGGAGA+CGG | + | chr5_1:15590286-15590305 | None:intergenic | 65.0% | |
| CGCGCTGTTTATGACCGCGG+TGG | - | chr5_1:15590446-15590465 | Msa0719920:CDS | 65.0% | |
| TGGCGGTTACACCACCACCG+CGG | + | chr5_1:15590463-15590482 | None:intergenic | 65.0% | |
| ! | TGGTGGTGTAACCGCCACCG+CGG | - | chr5_1:15590466-15590485 | Msa0719920:CDS | 65.0% |
| ! | TAACCGCCACCGCGGCGTTT+TGG | - | chr5_1:15590474-15590493 | Msa0719920:CDS | 65.0% |
| AGTCCAAAACGCCGCGGTGG+CGG | + | chr5_1:15590480-15590499 | None:intergenic | 65.0% | |
| CGGTGAAGTTGCGGGCGGAG+AGG | + | chr5_1:15590163-15590182 | None:intergenic | 70.0% | |
| GCTGGCGGCGGTGAAGTTGC+GGG | + | chr5_1:15590171-15590190 | None:intergenic | 70.0% | |
| CGCTGGCGGCGGTGAAGTTG+CGG | + | chr5_1:15590172-15590191 | None:intergenic | 70.0% | |
| GAAGCGGGGGAGACGGAGGA+CGG | + | chr5_1:15590279-15590298 | None:intergenic | 70.0% | |
| CGCAGTCCAAAACGCCGCGG+TGG | + | chr5_1:15590483-15590502 | None:intergenic | 70.0% | |
| GGCGGCGGTGAAGTTGCGGG+CGG | + | chr5_1:15590168-15590187 | None:intergenic | 75.0% | |
| ACGGGCGAAGTCGCTGGCGG+CGG | + | chr5_1:15590183-15590202 | None:intergenic | 75.0% | |
| GCGACGGGCGAAGTCGCTGG+CGG | + | chr5_1:15590186-15590205 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 15590098 | 15593942 | 15590098 | ID=Msa0719920;Name=Msa0719920 |
| chr5_1 | mRNA | 15590098 | 15593942 | 15590098 | ID=Msa0719920-mRNA-1;Parent=Msa0719920;Name=Msa0719920-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|0.75|1|1|4|0|530 |
| chr5_1 | exon | 15593023 | 15593942 | 15593023 | ID=Msa0719920-mRNA-1:exon:6020;Parent=Msa0719920-mRNA-1 |
| chr5_1 | exon | 15591057 | 15591099 | 15591057 | ID=Msa0719920-mRNA-1:exon:6019;Parent=Msa0719920-mRNA-1 |
| chr5_1 | exon | 15590752 | 15590982 | 15590752 | ID=Msa0719920-mRNA-1:exon:6018;Parent=Msa0719920-mRNA-1 |
| chr5_1 | exon | 15590098 | 15590496 | 15590098 | ID=Msa0719920-mRNA-1:exon:6017;Parent=Msa0719920-mRNA-1 |
| chr5_1 | CDS | 15593023 | 15593942 | 15593023 | ID=Msa0719920-mRNA-1:cds;Parent=Msa0719920-mRNA-1 |
| chr5_1 | CDS | 15591057 | 15591099 | 15591057 | ID=Msa0719920-mRNA-1:cds;Parent=Msa0719920-mRNA-1 |
| chr5_1 | CDS | 15590752 | 15590982 | 15590752 | ID=Msa0719920-mRNA-1:cds;Parent=Msa0719920-mRNA-1 |
| chr5_1 | CDS | 15590098 | 15590496 | 15590098 | ID=Msa0719920-mRNA-1:cds;Parent=Msa0719920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
