Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847940 | RDY07293.1 | 59.672 | 548 | 162 | 8 | 1 | 524 | 1 | 513 | 0.0 | 630 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847940 | sp|P0CB25|BH131_ARATH | 46.193 | 197 | 85 | 6 | 319 | 506 | 38 | 222 | 2.17e-41 | 152 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847940 | A0A371HX18 | 59.672 | 548 | 162 | 8 | 1 | 524 | 1 | 513 | 0.0 | 630 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0847940 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0719920 | Msa0847940 | 0.833044 | 6.684684e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847940 | MtrunA17_Chr5g0412361 | 91.234 | 308 | 23 | 2 | 1 | 306 | 1 | 306 | 0.0 | 582 |
| Msa0847940 | MtrunA17_Chr5g0412371 | 94.231 | 208 | 11 | 1 | 323 | 530 | 1 | 207 | 1.42e-136 | 394 |
| Msa0847940 | MtrunA17_Chr8g0367601 | 46.231 | 199 | 85 | 6 | 17 | 198 | 15 | 208 | 1.28e-49 | 171 |
| Msa0847940 | MtrunA17_Chr3g0132971 | 34.171 | 199 | 102 | 7 | 21 | 198 | 18 | 208 | 2.86e-29 | 115 |
| Msa0847940 | MtrunA17_Chr5g0427361 | 41.143 | 175 | 81 | 4 | 354 | 506 | 23 | 197 | 8.65e-24 | 100 |
| Msa0847940 | MtrunA17_Chr7g0255961 | 37.079 | 178 | 96 | 5 | 354 | 522 | 62 | 232 | 1.22e-23 | 100 |
| Msa0847940 | MtrunA17_Chr5g0427371 | 31.102 | 254 | 106 | 8 | 21 | 213 | 19 | 264 | 2.42e-23 | 101 |
| Msa0847940 | MtrunA17_Chr1g0198801 | 35.955 | 178 | 96 | 3 | 354 | 520 | 145 | 315 | 6.23e-23 | 100 |
| Msa0847940 | MtrunA17_Chr3g0113721 | 36.257 | 171 | 85 | 4 | 367 | 520 | 39 | 202 | 1.57e-21 | 93.6 |
| Msa0847940 | MtrunA17_Chr2g0325521 | 39.583 | 144 | 72 | 3 | 362 | 499 | 54 | 188 | 1.06e-18 | 85.9 |
| Msa0847940 | MtrunA17_Chr4g0041051 | 36.364 | 154 | 81 | 3 | 359 | 505 | 60 | 203 | 2.44e-16 | 79.0 |
| Msa0847940 | MtrunA17_Chr2g0279591 | 41.791 | 67 | 39 | 0 | 132 | 198 | 244 | 310 | 5.86e-13 | 71.2 |
| Msa0847940 | MtrunA17_Chr4g0049941 | 53.659 | 41 | 19 | 0 | 131 | 171 | 218 | 258 | 2.23e-12 | 69.3 |
| Msa0847940 | MtrunA17_Chr4g0049941 | 34.884 | 129 | 69 | 5 | 6 | 121 | 4 | 130 | 5.13e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847940 | AT4G38070.1 | 46.193 | 197 | 85 | 6 | 319 | 506 | 38 | 222 | 2.21e-42 | 152 |
| Msa0847940 | AT5G09540.1 | 31.818 | 220 | 104 | 6 | 15 | 196 | 18 | 229 | 2.00e-26 | 109 |
| Msa0847940 | AT5G64360.1 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 3.80e-24 | 105 |
| Msa0847940 | AT2G01710.1 | 28.205 | 234 | 121 | 8 | 21 | 216 | 21 | 245 | 4.23e-24 | 103 |
| Msa0847940 | AT5G64360.5 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 6.15e-24 | 105 |
| Msa0847940 | AT5G64360.7 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 6.15e-24 | 105 |
| Msa0847940 | AT5G64360.6 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 6.15e-24 | 105 |
| Msa0847940 | AT5G64360.3 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 6.15e-24 | 105 |
| Msa0847940 | AT5G64360.2 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 6.15e-24 | 105 |
| Msa0847940 | AT5G64360.4 | 30.992 | 242 | 102 | 7 | 15 | 198 | 22 | 256 | 6.15e-24 | 105 |
| Msa0847940 | AT2G01710.2 | 28.205 | 234 | 121 | 8 | 21 | 216 | 65 | 289 | 9.46e-24 | 103 |
| Msa0847940 | AT3G25710.1 | 41.611 | 149 | 77 | 3 | 354 | 499 | 119 | 260 | 1.41e-23 | 102 |
| Msa0847940 | AT1G68810.1 | 42.012 | 169 | 78 | 3 | 365 | 520 | 172 | 333 | 5.35e-23 | 101 |
| Msa0847940 | AT3G56770.1 | 33.333 | 174 | 93 | 6 | 362 | 522 | 39 | 202 | 1.61e-20 | 90.9 |
| Msa0847940 | AT2G40200.1 | 37.778 | 135 | 68 | 3 | 368 | 494 | 64 | 190 | 1.60e-18 | 85.9 |
| Msa0847940 | AT2G41130.1 | 35.429 | 175 | 95 | 5 | 359 | 522 | 58 | 225 | 3.39e-18 | 84.7 |
Find 136 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTAAGAGGATTGCGAATT+TGG | 0.163218 | 5_4:+32075222 | None:intergenic |
| TGGGGCAGACAAATTGAATT+TGG | 0.253589 | 5_4:-32071894 | Msa0847940:CDS |
| AGAATGACAAGATTTGATTT+TGG | 0.263511 | 5_4:-32074641 | Msa0847940:CDS |
| TAACCGCCACCGCGGCGTTT+TGG | 0.301094 | 5_4:-32075084 | Msa0847940:CDS |
| GGTTTCTTTGGGAAGCAAAA+TGG | 0.324722 | 5_4:-32072607 | Msa0847940:CDS |
| GTTGGTGCAACCGTCGTAGA+AGG | 0.342285 | 5_4:-32074941 | Msa0847940:CDS |
| TGTCTGCCCCACCAGGAAAC+TGG | 0.346018 | 5_4:+32071906 | None:intergenic |
| TGATACAAATTCCAACAATA+AGG | 0.361104 | 5_4:+32075052 | None:intergenic |
| TTGGACCCATAACACACTTC+TGG | 0.378699 | 5_4:+32071727 | None:intergenic |
| ACACTAACTTTGATCAAGTT+GGG | 0.389149 | 5_4:+32072280 | None:intergenic |
| AGGTGTTGAAAATGAAGGTT+TGG | 0.393224 | 5_4:-32071705 | Msa0847940:CDS |
| AATGAAAGCCAAAGTTGTTA+AGG | 0.399548 | 5_4:-32071777 | Msa0847940:CDS |
| GTGTTGATGATGTCTTTGTT+GGG | 0.400072 | 5_4:-32074568 | Msa0847940:CDS |
| GGTGTTGATGATGTCTTTGT+TGG | 0.400921 | 5_4:-32074569 | Msa0847940:CDS |
| GAAGAACCAGAAGTGTGTTA+TGG | 0.408049 | 5_4:-32071733 | Msa0847940:CDS |
| CATCTCAACCTTAACAACTT+TGG | 0.408942 | 5_4:+32071769 | None:intergenic |
| CGCTGGCGGCGGTGAAGTTG+CGG | 0.410086 | 5_4:+32075389 | None:intergenic |
| GGATGGAAAGGATTGTGAAT+TGG | 0.411240 | 5_4:-32074603 | Msa0847940:CDS |
| GACGGTGATGAGAGCTTAAT+GGG | 0.418200 | 5_4:-32074854 | Msa0847940:CDS |
| AAGAACCAGAAGTGTGTTAT+GGG | 0.427563 | 5_4:-32071732 | Msa0847940:CDS |
| AGACGGTGATGAGAGCTTAA+TGG | 0.428034 | 5_4:-32074855 | Msa0847940:CDS |
| ATGGTGATTGGGAGAAAGAA+TGG | 0.429973 | 5_4:-32074793 | Msa0847940:CDS |
| TCAAAGGAGATCCAGTTTCC+TGG | 0.436396 | 5_4:-32071917 | Msa0847940:CDS |
| GGACTGCGTGTCCTTATTGT+TGG | 0.437314 | 5_4:-32075063 | Msa0847940:CDS |
| TGGTGATTGGGAGAAAGAAT+GGG | 0.441553 | 5_4:-32074792 | Msa0847940:CDS |
| GACACTAACTTTGATCAAGT+TGG | 0.443559 | 5_4:+32072279 | None:intergenic |
| TTTAGCACAAAGGTTTCTTT+GGG | 0.444047 | 5_4:-32072618 | Msa0847940:intron |
| GCGAGCTAGGTCACGGTTGA+CGG | 0.444956 | 5_4:+32075255 | None:intergenic |
| GATGAGGCGGTATACTCAAT+AGG | 0.446628 | 5_4:-32071633 | None:intergenic |
| GCTAGGGCTTCATCTTGAAA+AGG | 0.446713 | 5_4:+32075178 | None:intergenic |
| GCTGGCGGCGGTGAAGTTGC+GGG | 0.446897 | 5_4:+32075390 | None:intergenic |
| AGGCTTCACGAACACGAGCT+AGG | 0.447670 | 5_4:+32075161 | None:intergenic |
| GGTGTTGAAAATGAAGGTTT+GGG | 0.450241 | 5_4:-32071704 | Msa0847940:CDS |
| GAGGATTCGGCCGATTGAAT+CGG | 0.450460 | 5_4:+32075342 | None:intergenic |
| TTCAATTTGTCTGCCCCACC+AGG | 0.456050 | 5_4:+32071899 | None:intergenic |
| TTTCTGATGATGATGGTGAT+TGG | 0.457277 | 5_4:-32074805 | Msa0847940:CDS |
| ACGGGCGAAGTCGCTGGCGG+CGG | 0.460386 | 5_4:+32075378 | None:intergenic |
| ACGGTTGACGGATTCGAAGC+GGG | 0.464496 | 5_4:+32075267 | None:intergenic |
| TGGCACGTTCTCTCTGACCC+TGG | 0.465872 | 5_4:-32075139 | Msa0847940:CDS |
| TGGCGTAATGCTGGCGAGCT+AGG | 0.465975 | 5_4:+32075242 | None:intergenic |
| TAAGCGACGGGCGAAGTCGC+TGG | 0.467695 | 5_4:+32075372 | None:intergenic |
| TACCGCCTCATCTTAAAACT+TGG | 0.469951 | 5_4:+32071644 | None:intergenic |
| AGGGTCAGAGAGAACGTGCC+AGG | 0.471268 | 5_4:+32075141 | None:intergenic |
| CCTTTCAAAGGATCCGAATC+CGG | 0.473184 | 5_4:-32075454 | Msa0847940:CDS |
| TTGCGAATTTGGCGTAATGC+TGG | 0.474043 | 5_4:+32075233 | None:intergenic |
| TTCTGATGATGATGGTGATT+GGG | 0.476747 | 5_4:-32074804 | Msa0847940:CDS |
| CGTCTGCGATTGTGAGGATT+CGG | 0.480284 | 5_4:+32075329 | None:intergenic |
| TGATTTGGGTTTGGATGGAA+AGG | 0.486063 | 5_4:-32074615 | Msa0847940:CDS |
| TAGCTCGTGTTCGTGAAGCC+TGG | 0.493626 | 5_4:-32075159 | Msa0847940:CDS |
| TTCACTTCGTAAAATTTCAA+CGG | 0.498543 | 5_4:+32074878 | None:intergenic |
| GTTTATGTTTCTGATGATGA+TGG | 0.502811 | 5_4:-32074812 | Msa0847940:CDS |
| ATCTTGAAAAGGGAATTTCT+CGG | 0.504744 | 5_4:+32075189 | None:intergenic |
| GATATAGATGACATCAATCC+TGG | 0.505784 | 5_4:+32071815 | None:intergenic |
| CCGGATTCGGATCCTTTGAA+AGG | 0.507587 | 5_4:+32075454 | None:intergenic |
| GATTGATGCATGTTACGATC+GGG | 0.507973 | 5_4:+32075422 | None:intergenic |
| AGACGTAGAATGCGAATCAA+TGG | 0.510341 | 5_4:-32072331 | Msa0847940:CDS |
| GTTAAGTCACCGGTCAAAGT+TGG | 0.511734 | 5_4:-32074959 | Msa0847940:CDS |
| ATGATGTCTTTGTTGGGGTG+AGG | 0.511784 | 5_4:-32074562 | Msa0847940:intron |
| ACGGTTGCACCAACTTTGAC+CGG | 0.516013 | 5_4:+32074950 | None:intergenic |
| CCCAAAATGAATCCTTTCAA+AGG | 0.517478 | 5_4:-32075466 | None:intergenic |
| AGGGAATTTCTCGGAGCTAG+TGG | 0.518958 | 5_4:+32075198 | None:intergenic |
| GACGGAGTAGTGGTCGGTGG+CGG | 0.529646 | 5_4:+32075300 | None:intergenic |
| GGTAATGATTTGGGTTTGGA+TGG | 0.533953 | 5_4:-32074620 | Msa0847940:CDS |
| CTAGGGCTTCATCTTGAAAA+GGG | 0.534113 | 5_4:+32075179 | None:intergenic |
| AGGAAACTGGATCTCCTTTG+AGG | 0.538324 | 5_4:+32071919 | None:intergenic |
| GGCTTCACGAACACGAGCTA+GGG | 0.541101 | 5_4:+32075162 | None:intergenic |
| CAAAGTTGTTAAGGTTGAGA+TGG | 0.542500 | 5_4:-32071768 | Msa0847940:CDS |
| TTGGTGCAACCGTCGTAGAA+GGG | 0.545945 | 5_4:-32074940 | Msa0847940:CDS |
| AGATTGATGCATGTTACGAT+CGG | 0.548031 | 5_4:+32075421 | None:intergenic |
| GTCCAAGGTGTTGAAAATGA+AGG | 0.548376 | 5_4:-32071710 | Msa0847940:CDS |
| CGGAGCTAGTGGGATCTAAG+AGG | 0.548715 | 5_4:+32075209 | None:intergenic |
| AGTCCAAAACGCCGCGGTGG+CGG | 0.553070 | 5_4:+32075081 | None:intergenic |
| ATCGGAGAGTGGTAAGCGAC+GGG | 0.559389 | 5_4:+32075360 | None:intergenic |
| GGTGATTGGGAGAAAGAATG+GGG | 0.559947 | 5_4:-32074791 | Msa0847940:CDS |
| GATGCTGGTGTGAGAAATGA+AGG | 0.561224 | 5_4:-32074758 | Msa0847940:CDS |
| CGGCATGGCGGTTAAGTCAC+CGG | 0.563481 | 5_4:-32074969 | Msa0847940:CDS |
| TGTTGATGATGTCTTTGTTG+GGG | 0.565401 | 5_4:-32074567 | Msa0847940:CDS |
| GCTGTTTATGACCGCGGTGG+TGG | 0.566092 | 5_4:-32075109 | Msa0847940:CDS |
| TTACCACTCTCCGATTCAAT+CGG | 0.568472 | 5_4:-32075352 | Msa0847940:CDS |
| GGGAATTTCTCGGAGCTAGT+GGG | 0.573416 | 5_4:+32075199 | None:intergenic |
| GGAAAAGTGTAATGATGAGG+AGG | 0.576454 | 5_4:-32071873 | Msa0847940:CDS |
| TTGAGTTGTGAGGATAGACC+AGG | 0.582755 | 5_4:-32071833 | Msa0847940:CDS |
| GGAGATCCAGTTTCCTGGTG+GGG | 0.584829 | 5_4:-32071912 | Msa0847940:CDS |
| GGATCTCCTTTGAGGTAGCA+TGG | 0.586127 | 5_4:+32071927 | None:intergenic |
| AGCGGCAGTACTATAAGTGT+AGG | 0.586899 | 5_4:-32074910 | Msa0847940:CDS |
| AGAAGTGTGTTATGGGTCCA+AGG | 0.587934 | 5_4:-32071725 | Msa0847940:CDS |
| GAAACGATAAACGAAAGATG+AGG | 0.587943 | 5_4:-32074697 | Msa0847940:CDS |
| CATGTTCGAAATTACTGTAA+CGG | 0.590992 | 5_4:-32072487 | Msa0847940:CDS |
| CACTAACTTTGATCAAGTTG+GGG | 0.594450 | 5_4:+32072281 | None:intergenic |
| CGGTTGACGGATTCGAAGCG+GGG | 0.599356 | 5_4:+32075268 | None:intergenic |
| GCGGCAGTACTATAAGTGTA+GGG | 0.600023 | 5_4:-32074909 | Msa0847940:CDS |
| GGAGACTATCAAACAAGTGA+AGG | 0.601788 | 5_4:-32071987 | Msa0847940:CDS |
| AATGCTGGCGAGCTAGGTCA+CGG | 0.602108 | 5_4:+32075248 | None:intergenic |
| GGAGACGGAGGACGGAGTAG+TGG | 0.602128 | 5_4:+32075290 | None:intergenic |
| CGGTGAAGTTGCGGGCGGAG+AGG | 0.602692 | 5_4:+32075398 | None:intergenic |
| AAACGATAAACGAAAGATGA+GGG | 0.605453 | 5_4:-32074696 | Msa0847940:CDS |
| AGGAGATCCAGTTTCCTGGT+GGG | 0.605957 | 5_4:-32071913 | Msa0847940:CDS |
| TGGTGCAACCGTCGTAGAAG+GGG | 0.607788 | 5_4:-32074939 | Msa0847940:CDS |
| GTTGAGATGGTGACAGTGGG+TGG | 0.609342 | 5_4:-32071755 | Msa0847940:CDS |
| CACGGTTGACGGATTCGAAG+CGG | 0.610190 | 5_4:+32075266 | None:intergenic |
| GAAAAGTGTAATGATGAGGA+GGG | 0.610839 | 5_4:-32071872 | Msa0847940:CDS |
| TAAGGTTGAGATGGTGACAG+TGG | 0.619246 | 5_4:-32071759 | Msa0847940:CDS |
| TGTGAATTGGAGTTTACTGA+AGG | 0.619463 | 5_4:-32074590 | Msa0847940:CDS |
| CGCAGTCCAAAACGCCGCGG+TGG | 0.620611 | 5_4:+32075078 | None:intergenic |
| AATCGGAGAGTGGTAAGCGA+CGG | 0.620703 | 5_4:+32075359 | None:intergenic |
| GCGACGGGCGAAGTCGCTGG+CGG | 0.623502 | 5_4:+32075375 | None:intergenic |
| ACGGAGGACGGAGTAGTGGT+CGG | 0.624152 | 5_4:+32075294 | None:intergenic |
| TAACTTTGATCAAGTTGGGG+AGG | 0.625634 | 5_4:+32072284 | None:intergenic |
| GGACAAGGCATCAATACTAG+TGG | 0.628919 | 5_4:-32072008 | Msa0847940:CDS |
| CGGCCGATTGAATCGGAGAG+TGG | 0.629320 | 5_4:+32075349 | None:intergenic |
| TGCAACCGTCGTAGAAGGGG+AGG | 0.632359 | 5_4:-32074936 | Msa0847940:CDS |
| TCGTAGAAGGGGAGGAAAAG+CGG | 0.632435 | 5_4:-32074928 | Msa0847940:CDS |
| TATCTCGAAGCAAAGATCAA+AGG | 0.632574 | 5_4:-32072401 | Msa0847940:CDS |
| AGATAGCCATGCTACCTCAA+AGG | 0.632769 | 5_4:-32071933 | Msa0847940:CDS |
| AGAGCACGTCTGCGATTGTG+AGG | 0.638432 | 5_4:+32075323 | None:intergenic |
| TATTGATTGACAGAAGGACA+AGG | 0.644249 | 5_4:-32072023 | Msa0847940:intron |
| AAGGTTGAGATGGTGACAGT+GGG | 0.645311 | 5_4:-32071758 | Msa0847940:CDS |
| GAGGACGGAGTAGTGGTCGG+TGG | 0.645556 | 5_4:+32075297 | None:intergenic |
| AAGGAGATCCAGTTTCCTGG+TGG | 0.648546 | 5_4:-32071914 | Msa0847940:CDS |
| GGCGGCGGTGAAGTTGCGGG+CGG | 0.649993 | 5_4:+32075393 | None:intergenic |
| CTCGAAGCAAAGATCAAAGG+CGG | 0.651214 | 5_4:-32072398 | Msa0847940:CDS |
| AGTTGGGGAGGATACTGCGG+AGG | 0.655539 | 5_4:+32072296 | None:intergenic |
| GTGATTGGGAGAAAGAATGG+GGG | 0.664770 | 5_4:-32074790 | Msa0847940:CDS |
| TGAGAAGGTGAATCAAACAG+TGG | 0.667197 | 5_4:-32074732 | Msa0847940:CDS |
| GGTTGACGGATTCGAAGCGG+GGG | 0.670391 | 5_4:+32075269 | None:intergenic |
| TTTGGAAAAGTGTAATGATG+AGG | 0.678742 | 5_4:-32071876 | Msa0847940:CDS |
| CAAACAGTGGAAACAACGCA+AGG | 0.688821 | 5_4:-32074719 | Msa0847940:CDS |
| CGCGCTGTTTATGACCGCGG+TGG | 0.688930 | 5_4:-32075112 | Msa0847940:CDS |
| GAAAGCTACATTGAGTTGTG+AGG | 0.689461 | 5_4:-32071843 | Msa0847940:CDS |
| AAAGATGAGGGTGAAGACTG+TGG | 0.690035 | 5_4:-32074684 | Msa0847940:CDS |
| TCAAGTTGGGGAGGATACTG+CGG | 0.696028 | 5_4:+32072293 | None:intergenic |
| AAACGCGCTGTTTATGACCG+CGG | 0.715245 | 5_4:-32075115 | Msa0847940:CDS |
| GTTGGGGAGGATACTGCGGA+GGG | 0.717546 | 5_4:+32072297 | None:intergenic |
| TGGTGGTGTAACCGCCACCG+CGG | 0.724905 | 5_4:-32075092 | Msa0847940:CDS |
| ACACGCAGTCCAAAACGCCG+CGG | 0.773767 | 5_4:+32075075 | None:intergenic |
| TGGCGGTTACACCACCACCG+CGG | 0.784440 | 5_4:+32075098 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAAAATAACACTAA+AGG | - | chr5_4:32074085-32074104 | Msa0847940:intron | 10.0% |
| !!! | AGATAAAGTTTGTTAAATTT+TGG | - | chr5_4:32073564-32073583 | Msa0847940:intron | 15.0% |
| !! | AAATTAAACTGACTAAAAAT+AGG | - | chr5_4:32073994-32074013 | Msa0847940:intron | 15.0% |
| !! | CTAAAAAAAAACTATATAAC+AGG | + | chr5_4:32074041-32074060 | None:intergenic | 15.0% |
| !!! | GTTATATAGTTTTTTTTTAG+AGG | - | chr5_4:32074041-32074060 | Msa0847940:intron | 15.0% |
| !!! | TTTTATCTTCAATATCATTA+AGG | + | chr5_4:32074199-32074218 | None:intergenic | 15.0% |
| !!! | TGATTTGCAAAAATATATTT+TGG | + | chr5_4:32074242-32074261 | None:intergenic | 15.0% |
| !!! | AAATTTTGTTTTCATAAAGT+TGG | + | chr5_4:32074858-32074877 | None:intergenic | 15.0% |
| !!! | ATTTGATTTTGGTAATGATT+TGG | - | chr5_4:32072464-32072483 | Msa0847940:CDS | 20.0% |
| !!! | TTTGATTTTGGTAATGATTT+GGG | - | chr5_4:32072465-32072484 | Msa0847940:CDS | 20.0% |
| !! | ATCAGAATTTGGTAAATAAT+GGG | + | chr5_4:32073308-32073327 | None:intergenic | 20.0% |
| !!! | TTAACTCTTTGTTTTTAAGT+AGG | - | chr5_4:32073788-32073807 | Msa0847940:intron | 20.0% |
| !!! | TATTTGGCTATTTTATAAGA+AGG | - | chr5_4:32074155-32074174 | Msa0847940:intron | 20.0% |
| !! | GAAACTCTATCTTATAAAAA+TGG | - | chr5_4:32074272-32074291 | Msa0847940:intron | 20.0% |
| !! | TCATTATGAACATTTAACAT+AGG | - | chr5_4:32074315-32074334 | Msa0847940:intron | 20.0% |
| !!! | AGGATTTTGAAATTAATGTT+GGG | + | chr5_4:32074347-32074366 | None:intergenic | 20.0% |
| !!! | TAGGATTTTGAAATTAATGT+TGG | + | chr5_4:32074348-32074367 | None:intergenic | 20.0% |
| !!! | TTTTAGTAAAACACAATGAA+AGG | + | chr5_4:32074564-32074583 | None:intergenic | 20.0% |
| !!! | TTATACTTTTGTGTATTACA+AGG | - | chr5_4:32074879-32074898 | Msa0847940:CDS | 20.0% |
| !! | AACAAATTCTAAATTTAGCA+AGG | + | chr5_4:32075052-32075071 | None:intergenic | 20.0% |
| ! | TGATACAAATTCCAACAATA+AGG | + | chr5_4:32072045-32072064 | None:intergenic | 25.0% |
| !! | ACTTGTAAGAAAACTTTTCA+CGG | - | chr5_4:32072105-32072124 | Msa0847940:intron | 25.0% |
| ! | TTCACTTCGTAAAATTTCAA+CGG | + | chr5_4:32072219-32072238 | None:intergenic | 25.0% |
| !! | AAATTTTACGAAGTGAAAGA+CGG | - | chr5_4:32072222-32072241 | Msa0847940:intron | 25.0% |
| !!! | AGAATGACAAGATTTGATTT+TGG | - | chr5_4:32072453-32072472 | Msa0847940:CDS | 25.0% |
| !! | TGTTTTGCATAGATAGATTT+TGG | - | chr5_4:32072656-32072675 | Msa0847940:intron | 25.0% |
| !! | GTTTTGCATAGATAGATTTT+GGG | - | chr5_4:32072657-32072676 | Msa0847940:intron | 25.0% |
| ! | AAAAAGTGGCATTACAAAAA+TGG | + | chr5_4:32072781-32072800 | None:intergenic | 25.0% |
| ! | ATTGAATCACTTAATCAGAA+AGG | + | chr5_4:32072842-32072861 | None:intergenic | 25.0% |
| !!! | CAAACATCTTTGAAATTGTA+AGG | - | chr5_4:32072982-32073001 | Msa0847940:intron | 25.0% |
| ! | TGTATTTGCAAATTCAAAGT+TGG | - | chr5_4:32073222-32073241 | Msa0847940:intron | 25.0% |
| ! | GATCAGAATTTGGTAAATAA+TGG | + | chr5_4:32073309-32073328 | None:intergenic | 25.0% |
| ! | GAACAATCAAAATAAGAATG+TGG | + | chr5_4:32073365-32073384 | None:intergenic | 25.0% |
| ! | TTGGAATATAAATTTCAGCT+GGG | + | chr5_4:32073421-32073440 | None:intergenic | 25.0% |
| !! | ATCATTTAGTTTATGCAGAT+TGG | + | chr5_4:32073518-32073537 | None:intergenic | 25.0% |
| ! | AATCTGCATAAACTAAATGA+TGG | - | chr5_4:32073517-32073536 | Msa0847940:intron | 25.0% |
| ! | ATCTGCATAAACTAAATGAT+GGG | - | chr5_4:32073518-32073537 | Msa0847940:intron | 25.0% |
| !! | GTGAAGTTTTTAATAAAGAG+TGG | - | chr5_4:32073586-32073605 | Msa0847940:intron | 25.0% |
| !! | TGAATCATTCACACAAATTT+TGG | + | chr5_4:32073633-32073652 | None:intergenic | 25.0% |
| ! | AAAGTAAGGACATTAAGTTT+CGG | - | chr5_4:32073661-32073680 | Msa0847940:intron | 25.0% |
| ! | AGTCTCAACAATATTCATAA+GGG | + | chr5_4:32073815-32073834 | None:intergenic | 25.0% |
| ! | TAGTCTCAACAATATTCATA+AGG | + | chr5_4:32073816-32073835 | None:intergenic | 25.0% |
| !!! | TTATTTTAGAACTGTACAAC+AGG | + | chr5_4:32074071-32074090 | None:intergenic | 25.0% |
| ! | TACTAAAATAGTTAGAACAC+AGG | - | chr5_4:32074576-32074595 | Msa0847940:CDS | 25.0% |
| ! | ACTAAAATAGTTAGAACACA+GGG | - | chr5_4:32074577-32074596 | Msa0847940:CDS | 25.0% |
| ! | ACTATTATTGTAAGGAAGAA+TGG | - | chr5_4:32074929-32074948 | Msa0847940:CDS | 25.0% |
| ! | AATGGTTAAATATGTTGATG+TGG | - | chr5_4:32074947-32074966 | Msa0847940:CDS | 25.0% |
| ! | TAAATTTAGCAAGGTTGTTT+AGG | + | chr5_4:32075043-32075062 | None:intergenic | 25.0% |
| !!! | ATTTGTTATTGATTGACAGA+AGG | - | chr5_4:32075065-32075084 | Msa0847940:CDS | 25.0% |
| ATCTTGAAAAGGGAATTTCT+CGG | + | chr5_4:32071908-32071927 | None:intergenic | 30.0% | |
| ! | GTTTATGTTTCTGATGATGA+TGG | - | chr5_4:32072282-32072301 | Msa0847940:intron | 30.0% |
| AAACGATAAACGAAAGATGA+GGG | - | chr5_4:32072398-32072417 | Msa0847940:CDS | 30.0% | |
| !!! | TTTTGGTAATGATTTGGGTT+TGG | - | chr5_4:32072470-32072489 | Msa0847940:CDS | 30.0% |
| AATGGGTGATAGAAATGTTA+AGG | - | chr5_4:32072558-32072577 | Msa0847940:intron | 30.0% | |
| ATGGGTGATAGAAATGTTAA+GGG | - | chr5_4:32072559-32072578 | Msa0847940:intron | 30.0% | |
| ATTGATTATGTGCATCTTAG+TGG | - | chr5_4:32072729-32072748 | Msa0847940:intron | 30.0% | |
| TTGATTATGTGCATCTTAGT+GGG | - | chr5_4:32072730-32072749 | Msa0847940:intron | 30.0% | |
| TCAAACAGTTCAAGAAAAAG+TGG | + | chr5_4:32072795-32072814 | None:intergenic | 30.0% | |
| ATTCGAGGAAATCTTCAATT+TGG | - | chr5_4:32072932-32072951 | Msa0847940:intron | 30.0% | |
| ATACATGATGAAAGAATTGC+AGG | + | chr5_4:32073207-32073226 | None:intergenic | 30.0% | |
| ! | GAATTTGGTAAATAATGGGA+AGG | + | chr5_4:32073304-32073323 | None:intergenic | 30.0% |
| AAATAAGAATGTGGCTATTG+AGG | + | chr5_4:32073356-32073375 | None:intergenic | 30.0% | |
| GTTGGAATATAAATTTCAGC+TGG | + | chr5_4:32073422-32073441 | None:intergenic | 30.0% | |
| TCTGCATAAACTAAATGATG+GGG | - | chr5_4:32073519-32073538 | Msa0847940:intron | 30.0% | |
| GAATATTGTTGAGACTAAAG+AGG | - | chr5_4:32073819-32073838 | Msa0847940:intron | 30.0% | |
| ATGTCTTTAGTGCAACTATT+TGG | - | chr5_4:32074139-32074158 | Msa0847940:intron | 30.0% | |
| AATCAAAGAGACTTTATGGT+AGG | + | chr5_4:32074367-32074386 | None:intergenic | 30.0% | |
| AGCAAATCAAAGAGACTTTA+TGG | + | chr5_4:32074371-32074390 | None:intergenic | 30.0% | |
| ATGCAATTACAACAAAAGCA+AGG | + | chr5_4:32074443-32074462 | None:intergenic | 30.0% | |
| ! | TTTTAGCACAAAGGTTTCTT+TGG | - | chr5_4:32074475-32074494 | Msa0847940:intron | 30.0% |
| TTTAGCACAAAGGTTTCTTT+GGG | - | chr5_4:32074476-32074495 | Msa0847940:intron | 30.0% | |
| CATGTTCGAAATTACTGTAA+CGG | - | chr5_4:32074607-32074626 | Msa0847940:CDS | 30.0% | |
| ACACTAACTTTGATCAAGTT+GGG | + | chr5_4:32074817-32074836 | None:intergenic | 30.0% | |
| ! | TTTGGAAAAGTGTAATGATG+AGG | - | chr5_4:32075218-32075237 | Msa0847940:CDS | 30.0% |
| AATGAAAGCCAAAGTTGTTA+AGG | - | chr5_4:32075317-32075336 | Msa0847940:CDS | 30.0% | |
| !!! | ATAAGCCAAGTTTTAAGATG+AGG | - | chr5_4:32075445-32075464 | Msa0847940:CDS | 30.0% |
| AGATTGATGCATGTTACGAT+CGG | + | chr5_4:32071676-32071695 | None:intergenic | 35.0% | |
| ATCTAAGAGGATTGCGAATT+TGG | + | chr5_4:32071875-32071894 | None:intergenic | 35.0% | |
| ! | TAAGAAAACTTTTCACGGCA+TGG | - | chr5_4:32072110-32072129 | Msa0847940:intron | 35.0% |
| !! | TTTCTGATGATGATGGTGAT+TGG | - | chr5_4:32072289-32072308 | Msa0847940:CDS | 35.0% |
| !! | TTCTGATGATGATGGTGATT+GGG | - | chr5_4:32072290-32072309 | Msa0847940:CDS | 35.0% |
| !!! | GAGAAATGAAGGTTTTGAGA+AGG | - | chr5_4:32072347-32072366 | Msa0847940:CDS | 35.0% |
| GAAACGATAAACGAAAGATG+AGG | - | chr5_4:32072397-32072416 | Msa0847940:CDS | 35.0% | |
| TGTGAATTGGAGTTTACTGA+AGG | - | chr5_4:32072504-32072523 | Msa0847940:intron | 35.0% | |
| !! | GTGTTGATGATGTCTTTGTT+GGG | - | chr5_4:32072526-32072545 | Msa0847940:intron | 35.0% |
| !! | TGTTGATGATGTCTTTGTTG+GGG | - | chr5_4:32072527-32072546 | Msa0847940:intron | 35.0% |
| !!! | GGGAAGTTTTTGTTGTTCTT+TGG | - | chr5_4:32072579-32072598 | Msa0847940:intron | 35.0% |
| !!! | GTTTTTGTTGTTCTTTGGCT+AGG | - | chr5_4:32072584-32072603 | Msa0847940:intron | 35.0% |
| TAGGTCTAGTGGTATGATAT+AGG | - | chr5_4:32072603-32072622 | Msa0847940:CDS | 35.0% | |
| ! | TTGCATAGATAGATTTTGGG+AGG | - | chr5_4:32072660-32072679 | Msa0847940:intron | 35.0% |
| TGATTATGTGCATCTTAGTG+GGG | - | chr5_4:32072731-32072750 | Msa0847940:intron | 35.0% | |
| ! | TGTTCTTGCTATGACTGAAT+TGG | - | chr5_4:32072876-32072895 | Msa0847940:intron | 35.0% |
| TCATGTTGTGATAGTTTCTC+TGG | - | chr5_4:32072902-32072921 | Msa0847940:intron | 35.0% | |
| !! | TTCTCTGGAGATTTTATTCG+AGG | - | chr5_4:32072917-32072936 | Msa0847940:intron | 35.0% |
| TTTGACGAAAATGATCAAGC+TGG | + | chr5_4:32073014-32073033 | None:intergenic | 35.0% | |
| !! | GTTACAATGCATTAGCTCTA+TGG | - | chr5_4:32073041-32073060 | Msa0847940:intron | 35.0% |
| TTTACCAAATTCTGATCCCT+AGG | - | chr5_4:32073312-32073331 | Msa0847940:intron | 35.0% | |
| !! | AGAGTAGTGCTTTAAGAAGT+TGG | + | chr5_4:32073440-32073459 | None:intergenic | 35.0% |
| TGTGTGAATGATTCAGTGAA+TGG | - | chr5_4:32073638-32073657 | Msa0847940:intron | 35.0% | |
| GATTCAGTGAATGGAAAGTA+AGG | - | chr5_4:32073647-32073666 | Msa0847940:intron | 35.0% | |
| AAATGAATTAGCTACTGCCA+TGG | - | chr5_4:32073686-32073705 | Msa0847940:intron | 35.0% | |
| ! | AGGTTACAGAGCTTTTGATA+AGG | - | chr5_4:32073731-32073750 | Msa0847940:intron | 35.0% |
| ! | GGTTACAGAGCTTTTGATAA+GGG | - | chr5_4:32073732-32073751 | Msa0847940:intron | 35.0% |
| ! | GTTACAGAGCTTTTGATAAG+GGG | - | chr5_4:32073733-32073752 | Msa0847940:intron | 35.0% |
| ACAACAAAAGCAAGGAAGAT+AGG | + | chr5_4:32074435-32074454 | None:intergenic | 35.0% | |
| AGAAACCTTTGTGCTAAAAG+AGG | + | chr5_4:32074474-32074493 | None:intergenic | 35.0% | |
| !! | CAAAATGGTTTTACTTCGAC+AGG | - | chr5_4:32074502-32074521 | Msa0847940:intron | 35.0% |
| TATCTCGAAGCAAAGATCAA+AGG | - | chr5_4:32074693-32074712 | Msa0847940:CDS | 35.0% | |
| ! | CACTAACTTTGATCAAGTTG+GGG | + | chr5_4:32074816-32074835 | None:intergenic | 35.0% |
| GACACTAACTTTGATCAAGT+TGG | + | chr5_4:32074818-32074837 | None:intergenic | 35.0% | |
| TCGCGATCACTATTATTGTA+AGG | - | chr5_4:32074921-32074940 | Msa0847940:CDS | 35.0% | |
| ! | TATTGATTGACAGAAGGACA+AGG | - | chr5_4:32075071-32075090 | Msa0847940:CDS | 35.0% |
| ! | GAAAAGTGTAATGATGAGGA+GGG | - | chr5_4:32075222-32075241 | Msa0847940:CDS | 35.0% |
| GATATAGATGACATCAATCC+TGG | + | chr5_4:32075282-32075301 | None:intergenic | 35.0% | |
| CATCTCAACCTTAACAACTT+TGG | + | chr5_4:32075328-32075347 | None:intergenic | 35.0% | |
| CAAAGTTGTTAAGGTTGAGA+TGG | - | chr5_4:32075326-32075345 | Msa0847940:CDS | 35.0% | |
| ! | AAGAACCAGAAGTGTGTTAT+GGG | - | chr5_4:32075362-32075381 | Msa0847940:CDS | 35.0% |
| ! | AACCTTCATTTTCAACACCT+TGG | + | chr5_4:32075389-32075408 | None:intergenic | 35.0% |
| !! | AGGTGTTGAAAATGAAGGTT+TGG | - | chr5_4:32075389-32075408 | Msa0847940:CDS | 35.0% |
| ! | GGTGTTGAAAATGAAGGTTT+GGG | - | chr5_4:32075390-32075409 | Msa0847940:CDS | 35.0% |
| GATTGATGCATGTTACGATC+GGG | + | chr5_4:32071675-32071694 | None:intergenic | 40.0% | |
| TTACCACTCTCCGATTCAAT+CGG | - | chr5_4:32071742-32071761 | Msa0847940:CDS | 40.0% | |
| CTAGGGCTTCATCTTGAAAA+GGG | + | chr5_4:32071918-32071937 | None:intergenic | 40.0% | |
| ATGGTGATTGGGAGAAAGAA+TGG | - | chr5_4:32072301-32072320 | Msa0847940:CDS | 40.0% | |
| TGGTGATTGGGAGAAAGAAT+GGG | - | chr5_4:32072302-32072321 | Msa0847940:CDS | 40.0% | |
| TGAGAAGGTGAATCAAACAG+TGG | - | chr5_4:32072362-32072381 | Msa0847940:CDS | 40.0% | |
| ! | GGTAATGATTTGGGTTTGGA+TGG | - | chr5_4:32072474-32072493 | Msa0847940:CDS | 40.0% |
| ! | TGATTTGGGTTTGGATGGAA+AGG | - | chr5_4:32072479-32072498 | Msa0847940:CDS | 40.0% |
| GGATGGAAAGGATTGTGAAT+TGG | - | chr5_4:32072491-32072510 | Msa0847940:CDS | 40.0% | |
| !! | GGTGTTGATGATGTCTTTGT+TGG | - | chr5_4:32072525-32072544 | Msa0847940:intron | 40.0% |
| AGGAGAAAAATGACTGATGG+AGG | - | chr5_4:32072680-32072699 | Msa0847940:intron | 40.0% | |
| ACGAAAATGATCAAGCTGGT+TGG | + | chr5_4:32073010-32073029 | None:intergenic | 40.0% | |
| TCATCTTCATCTTTCCCCTT+CGG | - | chr5_4:32073136-32073155 | Msa0847940:intron | 40.0% | |
| ! | GTTACAAAGCTTTTCCGAAG+GGG | + | chr5_4:32073153-32073172 | None:intergenic | 40.0% |
| ! | GGTTACAAAGCTTTTCCGAA+GGG | + | chr5_4:32073154-32073173 | None:intergenic | 40.0% |
| ! | AGGTTACAAAGCTTTTCCGA+AGG | + | chr5_4:32073155-32073174 | None:intergenic | 40.0% |
| CCACAAAGAAGGTGAATAAG+AGG | + | chr5_4:32073175-32073194 | None:intergenic | 40.0% | |
| CCTCTTATTCACCTTCTTTG+TGG | - | chr5_4:32073172-32073191 | Msa0847940:intron | 40.0% | |
| CTTATTCACCTTCTTTGTGG+TGG | - | chr5_4:32073175-32073194 | Msa0847940:intron | 40.0% | |
| AGGCTGTGGTAAACTCAAAT+GGG | + | chr5_4:32073260-32073279 | None:intergenic | 40.0% | |
| CATGACTAGAGAAGGTGAAT+AGG | - | chr5_4:32073711-32073730 | Msa0847940:intron | 40.0% | |
| ! | ACTTGCCTCTTTTAGCACAA+AGG | - | chr5_4:32074466-32074485 | Msa0847940:intron | 40.0% |
| ! | GGTTTCTTTGGGAAGCAAAA+TGG | - | chr5_4:32074487-32074506 | Msa0847940:intron | 40.0% |
| AGACGTAGAATGCGAATCAA+TGG | - | chr5_4:32074763-32074782 | Msa0847940:CDS | 40.0% | |
| !! | TAACTTTGATCAAGTTGGGG+AGG | + | chr5_4:32074813-32074832 | None:intergenic | 40.0% |
| TCACGATGCAGTCTAAATCA+TGG | - | chr5_4:32074982-32075001 | Msa0847940:CDS | 40.0% | |
| GGAGACTATCAAACAAGTGA+AGG | - | chr5_4:32075107-32075126 | Msa0847940:CDS | 40.0% | |
| TGGGGCAGACAAATTGAATT+TGG | - | chr5_4:32075200-32075219 | Msa0847940:CDS | 40.0% | |
| ! | GGAAAAGTGTAATGATGAGG+AGG | - | chr5_4:32075221-32075240 | Msa0847940:CDS | 40.0% |
| ! | GAAAGCTACATTGAGTTGTG+AGG | - | chr5_4:32075251-32075270 | Msa0847940:CDS | 40.0% |
| ! | GAAGAACCAGAAGTGTGTTA+TGG | - | chr5_4:32075361-32075380 | Msa0847940:CDS | 40.0% |
| !! | GTCCAAGGTGTTGAAAATGA+AGG | - | chr5_4:32075384-32075403 | Msa0847940:CDS | 40.0% |
| !!! | AGCCAAGTTTTAAGATGAGG+CGG | - | chr5_4:32075448-32075467 | Msa0847940:CDS | 40.0% |
| TACCGCCTCATCTTAAAACT+TGG | + | chr5_4:32075453-32075472 | None:intergenic | 40.0% | |
| CCTTTCAAAGGATCCGAATC+CGG | - | chr5_4:32071640-32071659 | Msa0847940:CDS | 45.0% | |
| ! | GCATGTTACGATCGGGTTTT+CGG | + | chr5_4:32071668-32071687 | None:intergenic | 45.0% |
| TTGCGAATTTGGCGTAATGC+TGG | + | chr5_4:32071864-32071883 | None:intergenic | 45.0% | |
| GCTAGGGCTTCATCTTGAAA+AGG | + | chr5_4:32071919-32071938 | None:intergenic | 45.0% | |
| ! | CATAAACAGCGCGTTTTCCA+GGG | + | chr5_4:32071975-32071994 | None:intergenic | 45.0% |
| ! | TCATAAACAGCGCGTTTTCC+AGG | + | chr5_4:32071976-32071995 | None:intergenic | 45.0% |
| ! | GAAAACTTTTCACGGCATGG+CGG | - | chr5_4:32072113-32072132 | Msa0847940:intron | 45.0% |
| GTTAAGTCACCGGTCAAAGT+TGG | - | chr5_4:32072135-32072154 | Msa0847940:intron | 45.0% | |
| AGCGGCAGTACTATAAGTGT+AGG | - | chr5_4:32072184-32072203 | Msa0847940:intron | 45.0% | |
| GCGGCAGTACTATAAGTGTA+GGG | - | chr5_4:32072185-32072204 | Msa0847940:intron | 45.0% | |
| AGACGGTGATGAGAGCTTAA+TGG | - | chr5_4:32072239-32072258 | Msa0847940:intron | 45.0% | |
| GACGGTGATGAGAGCTTAAT+GGG | - | chr5_4:32072240-32072259 | Msa0847940:intron | 45.0% | |
| GGTGATTGGGAGAAAGAATG+GGG | - | chr5_4:32072303-32072322 | Msa0847940:CDS | 45.0% | |
| GTGATTGGGAGAAAGAATGG+GGG | - | chr5_4:32072304-32072323 | Msa0847940:CDS | 45.0% | |
| GAGAAAGAATGGGGGAATGT+GGG | - | chr5_4:32072312-32072331 | Msa0847940:CDS | 45.0% | |
| GATGCTGGTGTGAGAAATGA+AGG | - | chr5_4:32072336-32072355 | Msa0847940:CDS | 45.0% | |
| CAAACAGTGGAAACAACGCA+AGG | - | chr5_4:32072375-32072394 | Msa0847940:CDS | 45.0% | |
| AAAGATGAGGGTGAAGACTG+TGG | - | chr5_4:32072410-32072429 | Msa0847940:CDS | 45.0% | |
| ATGATGTCTTTGTTGGGGTG+AGG | - | chr5_4:32072532-32072551 | Msa0847940:intron | 45.0% | |
| TTTGTTGGGGTGAGGTACAA+TGG | - | chr5_4:32072540-32072559 | Msa0847940:intron | 45.0% | |
| TTGTTGGGGTGAGGTACAAT+GGG | - | chr5_4:32072541-32072560 | Msa0847940:intron | 45.0% | |
| TGTTCTTTGGCTAGGTCTAG+TGG | - | chr5_4:32072592-32072611 | Msa0847940:intron | 45.0% | |
| GGGAGGAGAAAAATGACTGA+TGG | - | chr5_4:32072677-32072696 | Msa0847940:intron | 45.0% | |
| TTATGTGCATCTTAGTGGGG+AGG | - | chr5_4:32072734-32072753 | Msa0847940:intron | 45.0% | |
| TTAGCGAGTCACGTCTTTGA+TGG | - | chr5_4:32073067-32073086 | Msa0847940:intron | 45.0% | |
| GGCTGTGGTAAACTCAAATG+GGG | + | chr5_4:32073259-32073278 | None:intergenic | 45.0% | |
| GAGGCTGTGGTAAACTCAAA+TGG | + | chr5_4:32073261-32073280 | None:intergenic | 45.0% | |
| !! | TGAGCATGCTAGTCTTTCTG+AGG | + | chr5_4:32073280-32073299 | None:intergenic | 45.0% |
| AGCTCCTAGGGATCAGAATT+TGG | + | chr5_4:32073319-32073338 | None:intergenic | 45.0% | |
| AGAGAAACAGACAGCTCCTA+GGG | + | chr5_4:32073331-32073350 | None:intergenic | 45.0% | |
| TAGAGAAACAGACAGCTCCT+AGG | + | chr5_4:32073332-32073351 | None:intergenic | 45.0% | |
| CCTTCTCTAGTCATGTTCCA+TGG | + | chr5_4:32073706-32073725 | None:intergenic | 45.0% | |
| CCATGGAACATGACTAGAGA+AGG | - | chr5_4:32073703-32073722 | Msa0847940:intron | 45.0% | |
| ! | CAGAGCTTTTGATAAGGGGA+AGG | - | chr5_4:32073737-32073756 | Msa0847940:intron | 45.0% |
| AGGGGAAGGATGAAGATGAA+TGG | - | chr5_4:32073751-32073770 | Msa0847940:intron | 45.0% | |
| GGGGAAGGATGAAGATGAAT+GGG | - | chr5_4:32073752-32073771 | Msa0847940:intron | 45.0% | |
| CTCGAAGCAAAGATCAAAGG+CGG | - | chr5_4:32074696-32074715 | Msa0847940:CDS | 45.0% | |
| ! | GGACAAGGCATCAATACTAG+TGG | - | chr5_4:32075086-32075105 | Msa0847940:CDS | 45.0% |
| AGATAGCCATGCTACCTCAA+AGG | - | chr5_4:32075161-32075180 | Msa0847940:CDS | 45.0% | |
| AGGAAACTGGATCTCCTTTG+AGG | + | chr5_4:32075178-32075197 | None:intergenic | 45.0% | |
| TCAAAGGAGATCCAGTTTCC+TGG | - | chr5_4:32075177-32075196 | Msa0847940:CDS | 45.0% | |
| ! | TTGAGTTGTGAGGATAGACC+AGG | - | chr5_4:32075261-32075280 | Msa0847940:CDS | 45.0% |
| TAAGGTTGAGATGGTGACAG+TGG | - | chr5_4:32075335-32075354 | Msa0847940:CDS | 45.0% | |
| AAGGTTGAGATGGTGACAGT+GGG | - | chr5_4:32075336-32075355 | Msa0847940:CDS | 45.0% | |
| TTGGACCCATAACACACTTC+TGG | + | chr5_4:32075370-32075389 | None:intergenic | 45.0% | |
| ! | AGAAGTGTGTTATGGGTCCA+AGG | - | chr5_4:32075369-32075388 | Msa0847940:CDS | 45.0% |
| CCGGATTCGGATCCTTTGAA+AGG | + | chr5_4:32071643-32071662 | None:intergenic | 50.0% | |
| ! | TACGATCGGGTTTTCGGATC+CGG | + | chr5_4:32071662-32071681 | None:intergenic | 50.0% |
| AATCGGAGAGTGGTAAGCGA+CGG | + | chr5_4:32071738-32071757 | None:intergenic | 50.0% | |
| GAGGATTCGGCCGATTGAAT+CGG | + | chr5_4:32071755-32071774 | None:intergenic | 50.0% | |
| CGTCTGCGATTGTGAGGATT+CGG | + | chr5_4:32071768-32071787 | None:intergenic | 50.0% | |
| GGGAATTTCTCGGAGCTAGT+GGG | + | chr5_4:32071898-32071917 | None:intergenic | 50.0% | |
| AGGGAATTTCTCGGAGCTAG+TGG | + | chr5_4:32071899-32071918 | None:intergenic | 50.0% | |
| AAACGCGCTGTTTATGACCG+CGG | - | chr5_4:32071979-32071998 | Msa0847940:CDS | 50.0% | |
| GGACTGCGTGTCCTTATTGT+TGG | - | chr5_4:32072031-32072050 | Msa0847940:intron | 50.0% | |
| ACGGTTGCACCAACTTTGAC+CGG | + | chr5_4:32072147-32072166 | None:intergenic | 50.0% | |
| TTGGTGCAACCGTCGTAGAA+GGG | - | chr5_4:32072154-32072173 | Msa0847940:intron | 50.0% | |
| ! | CTTTTCCTCCCCTTCTACGA+CGG | + | chr5_4:32072166-32072185 | None:intergenic | 50.0% |
| TCGTAGAAGGGGAGGAAAAG+CGG | - | chr5_4:32072166-32072185 | Msa0847940:intron | 50.0% | |
| GGAGAAAGAATGGGGGAATG+TGG | - | chr5_4:32072311-32072330 | Msa0847940:CDS | 50.0% | |
| !! | ACGTCTTTGATGGCGTCGTA+GGG | - | chr5_4:32073077-32073096 | Msa0847940:intron | 50.0% |
| !! | TGCTAGTCTTTCTGAGGCTG+TGG | + | chr5_4:32073274-32073293 | None:intergenic | 50.0% |
| CTCCTTCTCATGCTCCATCT+AGG | - | chr5_4:32073389-32073408 | Msa0847940:intron | 50.0% | |
| TGCCTAGATGGAGCATGAGA+AGG | + | chr5_4:32073394-32073413 | None:intergenic | 50.0% | |
| !! | TCAAGTTGGGGAGGATACTG+CGG | + | chr5_4:32074804-32074823 | None:intergenic | 50.0% |
| !! | GGATCTCCTTTGAGGTAGCA+TGG | + | chr5_4:32075170-32075189 | None:intergenic | 50.0% |
| AAGGAGATCCAGTTTCCTGG+TGG | - | chr5_4:32075180-32075199 | Msa0847940:CDS | 50.0% | |
| AGGAGATCCAGTTTCCTGGT+GGG | - | chr5_4:32075181-32075200 | Msa0847940:CDS | 50.0% | |
| TTCAATTTGTCTGCCCCACC+AGG | + | chr5_4:32075198-32075217 | None:intergenic | 50.0% | |
| ! | CGGGTTTTCGGATCCGGATT+CGG | + | chr5_4:32071656-32071675 | None:intergenic | 55.0% |
| ATCGGAGAGTGGTAAGCGAC+GGG | + | chr5_4:32071737-32071756 | None:intergenic | 55.0% | |
| AGAGCACGTCTGCGATTGTG+AGG | + | chr5_4:32071774-32071793 | None:intergenic | 55.0% | |
| !! | ACGGTTGACGGATTCGAAGC+GGG | + | chr5_4:32071830-32071849 | None:intergenic | 55.0% |
| !! | CACGGTTGACGGATTCGAAG+CGG | + | chr5_4:32071831-32071850 | None:intergenic | 55.0% |
| AATGCTGGCGAGCTAGGTCA+CGG | + | chr5_4:32071849-32071868 | None:intergenic | 55.0% | |
| CGGAGCTAGTGGGATCTAAG+AGG | + | chr5_4:32071888-32071907 | None:intergenic | 55.0% | |
| GGCTTCACGAACACGAGCTA+GGG | + | chr5_4:32071935-32071954 | None:intergenic | 55.0% | |
| AGGCTTCACGAACACGAGCT+AGG | + | chr5_4:32071936-32071955 | None:intergenic | 55.0% | |
| TAGCTCGTGTTCGTGAAGCC+TGG | - | chr5_4:32071935-32071954 | Msa0847940:CDS | 55.0% | |
| GTTGGTGCAACCGTCGTAGA+AGG | - | chr5_4:32072153-32072172 | Msa0847940:intron | 55.0% | |
| TGGTGCAACCGTCGTAGAAG+GGG | - | chr5_4:32072155-32072174 | Msa0847940:intron | 55.0% | |
| !! | CACGTCTTTGATGGCGTCGT+AGG | - | chr5_4:32073076-32073095 | Msa0847940:intron | 55.0% |
| CGTCGTAGGGACTGAATCGA+AGG | - | chr5_4:32073090-32073109 | Msa0847940:intron | 55.0% | |
| GGATGACGCCACCACAAAGA+AGG | + | chr5_4:32073186-32073205 | None:intergenic | 55.0% | |
| CAGCTGGGTAGATGCCTAGA+TGG | + | chr5_4:32073406-32073425 | None:intergenic | 55.0% | |
| GGAGATCCAGTTTCCTGGTG+GGG | - | chr5_4:32075182-32075201 | Msa0847940:CDS | 55.0% | |
| GTTGAGATGGTGACAGTGGG+TGG | - | chr5_4:32075339-32075358 | Msa0847940:CDS | 55.0% | |
| CGGCCGATTGAATCGGAGAG+TGG | + | chr5_4:32071748-32071767 | None:intergenic | 60.0% | |
| ACGGAGGACGGAGTAGTGGT+CGG | + | chr5_4:32071803-32071822 | None:intergenic | 60.0% | |
| !! | GGTTGACGGATTCGAAGCGG+GGG | + | chr5_4:32071828-32071847 | None:intergenic | 60.0% |
| !! | CGGTTGACGGATTCGAAGCG+GGG | + | chr5_4:32071829-32071848 | None:intergenic | 60.0% |
| GCGAGCTAGGTCACGGTTGA+CGG | + | chr5_4:32071842-32071861 | None:intergenic | 60.0% | |
| TGGCGTAATGCTGGCGAGCT+AGG | + | chr5_4:32071855-32071874 | None:intergenic | 60.0% | |
| AGGGTCAGAGAGAACGTGCC+AGG | + | chr5_4:32071956-32071975 | None:intergenic | 60.0% | |
| TGGCACGTTCTCTCTGACCC+TGG | - | chr5_4:32071955-32071974 | Msa0847940:CDS | 60.0% | |
| GCTGTTTATGACCGCGGTGG+TGG | - | chr5_4:32071985-32072004 | Msa0847940:CDS | 60.0% | |
| ACACGCAGTCCAAAACGCCG+CGG | + | chr5_4:32072022-32072041 | None:intergenic | 60.0% | |
| CGGCATGGCGGTTAAGTCAC+CGG | - | chr5_4:32072125-32072144 | Msa0847940:intron | 60.0% | |
| TGCAACCGTCGTAGAAGGGG+AGG | - | chr5_4:32072158-32072177 | Msa0847940:intron | 60.0% | |
| TGGGGGAATGTGGGTGATGC+TGG | - | chr5_4:32072321-32072340 | Msa0847940:CDS | 60.0% | |
| GTTGGGGAGGATACTGCGGA+GGG | + | chr5_4:32074800-32074819 | None:intergenic | 60.0% | |
| AGTTGGGGAGGATACTGCGG+AGG | + | chr5_4:32074801-32074820 | None:intergenic | 60.0% | |
| TGTCTGCCCCACCAGGAAAC+TGG | + | chr5_4:32075191-32075210 | None:intergenic | 60.0% | |
| TAAGCGACGGGCGAAGTCGC+TGG | + | chr5_4:32071725-32071744 | None:intergenic | 65.0% | |
| GACGGAGTAGTGGTCGGTGG+CGG | + | chr5_4:32071797-32071816 | None:intergenic | 65.0% | |
| GAGGACGGAGTAGTGGTCGG+TGG | + | chr5_4:32071800-32071819 | None:intergenic | 65.0% | |
| GGAGACGGAGGACGGAGTAG+TGG | + | chr5_4:32071807-32071826 | None:intergenic | 65.0% | |
| ATTCGAAGCGGGGGAGACGG+AGG | + | chr5_4:32071819-32071838 | None:intergenic | 65.0% | |
| CGGATTCGAAGCGGGGGAGA+CGG | + | chr5_4:32071822-32071841 | None:intergenic | 65.0% | |
| CGCGCTGTTTATGACCGCGG+TGG | - | chr5_4:32071982-32072001 | Msa0847940:CDS | 65.0% | |
| TGGCGGTTACACCACCACCG+CGG | + | chr5_4:32071999-32072018 | None:intergenic | 65.0% | |
| ! | TGGTGGTGTAACCGCCACCG+CGG | - | chr5_4:32072002-32072021 | Msa0847940:CDS | 65.0% |
| ! | TAACCGCCACCGCGGCGTTT+TGG | - | chr5_4:32072010-32072029 | Msa0847940:CDS | 65.0% |
| AGTCCAAAACGCCGCGGTGG+CGG | + | chr5_4:32072016-32072035 | None:intergenic | 65.0% | |
| CGGTGAAGTTGCGGGCGGAG+AGG | + | chr5_4:32071699-32071718 | None:intergenic | 70.0% | |
| GCTGGCGGCGGTGAAGTTGC+GGG | + | chr5_4:32071707-32071726 | None:intergenic | 70.0% | |
| CGCTGGCGGCGGTGAAGTTG+CGG | + | chr5_4:32071708-32071727 | None:intergenic | 70.0% | |
| GAAGCGGGGGAGACGGAGGA+CGG | + | chr5_4:32071815-32071834 | None:intergenic | 70.0% | |
| CGCAGTCCAAAACGCCGCGG+TGG | + | chr5_4:32072019-32072038 | None:intergenic | 70.0% | |
| GGCGGCGGTGAAGTTGCGGG+CGG | + | chr5_4:32071704-32071723 | None:intergenic | 75.0% | |
| ACGGGCGAAGTCGCTGGCGG+CGG | + | chr5_4:32071719-32071738 | None:intergenic | 75.0% | |
| GCGACGGGCGAAGTCGCTGG+CGG | + | chr5_4:32071722-32071741 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 32071634 | 32075482 | 32071634 | ID=Msa0847940;Name=Msa0847940 |
| chr5_4 | mRNA | 32071634 | 32075482 | 32071634 | ID=Msa0847940-mRNA-1;Parent=Msa0847940;Name=Msa0847940-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|0.75|1|1|4|0|530 |
| chr5_4 | exon | 32074563 | 32075482 | 32074563 | ID=Msa0847940-mRNA-1:exon:11225;Parent=Msa0847940-mRNA-1 |
| chr5_4 | exon | 32072593 | 32072635 | 32072593 | ID=Msa0847940-mRNA-1:exon:11224;Parent=Msa0847940-mRNA-1 |
| chr5_4 | exon | 32072288 | 32072518 | 32072288 | ID=Msa0847940-mRNA-1:exon:11223;Parent=Msa0847940-mRNA-1 |
| chr5_4 | exon | 32071634 | 32072032 | 32071634 | ID=Msa0847940-mRNA-1:exon:11222;Parent=Msa0847940-mRNA-1 |
| chr5_4 | CDS | 32074563 | 32075482 | 32074563 | ID=Msa0847940-mRNA-1:cds;Parent=Msa0847940-mRNA-1 |
| chr5_4 | CDS | 32072593 | 32072635 | 32072593 | ID=Msa0847940-mRNA-1:cds;Parent=Msa0847940-mRNA-1 |
| chr5_4 | CDS | 32072288 | 32072518 | 32072288 | ID=Msa0847940-mRNA-1:cds;Parent=Msa0847940-mRNA-1 |
| chr5_4 | CDS | 32071634 | 32072032 | 32071634 | ID=Msa0847940-mRNA-1:cds;Parent=Msa0847940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
