Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720210 | XP_003612847.1 | 92.695 | 616 | 41 | 3 | 1 | 616 | 19 | 630 | 0.0 | 1167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720210 | sp|Q9JI90|RNF14_MOUSE | 30.416 | 457 | 269 | 11 | 113 | 529 | 7 | 454 | 2.15e-60 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720210 | G7KDN8 | 92.695 | 616 | 41 | 3 | 1 | 616 | 19 | 630 | 0.0 | 1167 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0720210 | Msa0760820 | 0.988369 | 9.453268e-174 | -8.615850e-47 |
| Msa0467220 | Msa0720210 | 0.801964 | 7.021655e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720210 | MtrunA17_Chr5g0410911 | 92.695 | 616 | 41 | 3 | 1 | 616 | 19 | 630 | 0.0 | 1167 |
| Msa0720210 | MtrunA17_Chr3g0103941 | 30.882 | 204 | 116 | 8 | 324 | 521 | 64 | 248 | 8.79e-17 | 80.5 |
| Msa0720210 | MtrunA17_Chr3g0103961 | 28.507 | 221 | 129 | 10 | 307 | 521 | 55 | 252 | 1.99e-15 | 76.6 |
| Msa0720210 | MtrunA17_Chr4g0031451 | 25.592 | 211 | 131 | 8 | 315 | 519 | 5 | 195 | 7.77e-15 | 73.6 |
| Msa0720210 | MtrunA17_Chr3g0103931 | 29.381 | 194 | 111 | 7 | 324 | 511 | 68 | 241 | 3.05e-14 | 73.2 |
| Msa0720210 | MtrunA17_Chr2g0301841 | 28.061 | 196 | 116 | 8 | 319 | 509 | 109 | 284 | 1.12e-13 | 72.4 |
| Msa0720210 | MtrunA17_Chr4g0034371 | 24.194 | 248 | 147 | 8 | 307 | 536 | 126 | 350 | 1.26e-13 | 73.9 |
| Msa0720210 | MtrunA17_Chr3g0104441 | 28.155 | 206 | 117 | 9 | 316 | 511 | 47 | 231 | 8.75e-13 | 68.9 |
| Msa0720210 | MtrunA17_Chr3g0104451 | 26.471 | 204 | 122 | 7 | 316 | 511 | 43 | 226 | 2.38e-12 | 67.0 |
| Msa0720210 | MtrunA17_Chr3g0103911 | 30.387 | 181 | 102 | 7 | 324 | 498 | 64 | 226 | 2.65e-12 | 67.0 |
| Msa0720210 | MtrunA17_Chr3g0103891 | 29.146 | 199 | 116 | 8 | 307 | 498 | 46 | 226 | 2.94e-12 | 67.0 |
| Msa0720210 | MtrunA17_Chr2g0301761 | 26.111 | 180 | 109 | 5 | 324 | 498 | 98 | 258 | 4.51e-12 | 66.6 |
| Msa0720210 | MtrunA17_Chr3g0103871 | 27.861 | 201 | 117 | 9 | 307 | 498 | 62 | 243 | 8.10e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720210 | AT1G32340.1 | 58.271 | 532 | 208 | 4 | 91 | 616 | 165 | 688 | 0.0 | 681 |
| Msa0720210 | AT3G14250.1 | 27.397 | 219 | 133 | 8 | 307 | 516 | 95 | 296 | 7.42e-19 | 88.2 |
| Msa0720210 | AT3G27710.1 | 24.000 | 225 | 143 | 5 | 302 | 519 | 116 | 319 | 7.61e-15 | 78.2 |
| Msa0720210 | AT4G34370.1 | 24.268 | 239 | 139 | 8 | 307 | 527 | 123 | 337 | 2.54e-13 | 73.6 |
| Msa0720210 | AT2G31770.1 | 23.967 | 242 | 146 | 8 | 306 | 539 | 127 | 338 | 1.49e-12 | 70.9 |
| Msa0720210 | AT2G31760.1 | 22.727 | 220 | 143 | 6 | 306 | 520 | 120 | 317 | 5.99e-12 | 68.9 |
| Msa0720210 | AT3G53690.1 | 25.907 | 193 | 117 | 7 | 324 | 510 | 133 | 305 | 7.68e-12 | 67.4 |
| Msa0720210 | AT2G16090.4 | 23.113 | 212 | 133 | 6 | 309 | 512 | 126 | 315 | 1.13e-11 | 68.2 |
| Msa0720210 | AT2G16090.1 | 23.113 | 212 | 133 | 6 | 309 | 512 | 126 | 315 | 1.17e-11 | 68.2 |
| Msa0720210 | AT2G16090.3 | 23.113 | 212 | 133 | 6 | 309 | 512 | 126 | 315 | 1.35e-11 | 67.8 |
| Msa0720210 | AT2G16090.5 | 23.113 | 212 | 133 | 6 | 309 | 512 | 66 | 255 | 1.50e-11 | 67.4 |
| Msa0720210 | AT2G16090.2 | 23.113 | 212 | 133 | 6 | 309 | 512 | 66 | 255 | 1.50e-11 | 67.8 |
| Msa0720210 | AT2G31510.3 | 24.215 | 223 | 142 | 8 | 307 | 522 | 65 | 267 | 4.92e-11 | 65.9 |
| Msa0720210 | AT2G31510.1 | 24.215 | 223 | 142 | 8 | 307 | 522 | 137 | 339 | 5.24e-11 | 65.9 |
| Msa0720210 | AT2G31510.2 | 24.215 | 223 | 142 | 8 | 307 | 522 | 137 | 339 | 6.52e-11 | 65.5 |
Find 132 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATAATGATATTGATTT+TGG | 0.119826 | 5_1:-16132315 | Msa0720210:CDS |
| AACATTCATGCAATTCTTTA+AGG | 0.130448 | 5_1:+16130737 | None:intergenic |
| GTAATACAATAAATATAAAT+TGG | 0.165508 | 5_1:-16126984 | Msa0720210:three_prime_UTR |
| TACATACCTTTACATTAAAT+TGG | 0.185931 | 5_1:+16128186 | None:intergenic |
| GCGGATGCACGCGTGGTTTC+GGG | 0.200364 | 5_1:-16130829 | Msa0720210:CDS |
| ACACATAAACATTGATGTTT+TGG | 0.229817 | 5_1:-16131205 | Msa0720210:CDS |
| CTTGTATTTGTTGTATTTCC+TGG | 0.231570 | 5_1:+16128252 | None:intergenic |
| AAATTCTTCTCTTTCTCATT+TGG | 0.248104 | 5_1:-16130899 | Msa0720210:CDS |
| TGCGGATGCACGCGTGGTTT+CGG | 0.255101 | 5_1:-16130830 | Msa0720210:CDS |
| GTTCCAAGTTGGATTCAATA+TGG | 0.273959 | 5_1:-16130972 | Msa0720210:CDS |
| TTCCTTGGTCTTGCTTGAAC+TGG | 0.288423 | 5_1:+16132350 | None:intergenic |
| GCACGCGTGGTTTCGGGAAT+TGG | 0.290428 | 5_1:-16130823 | Msa0720210:CDS |
| CTACTACCATTCATGTTTGA+TGG | 0.293502 | 5_1:+16132552 | None:intergenic |
| AATTCTTCTCTTTCTCATTT+GGG | 0.297733 | 5_1:-16130898 | Msa0720210:CDS |
| CTTGTGGTGGAATCAATTTA+TGG | 0.303138 | 5_1:-16131389 | Msa0720210:CDS |
| GAAATCGCCATATCACAAAA+AGG | 0.303844 | 5_1:+16128532 | None:intergenic |
| GAGATTAGATTAGGTCCTTA+TGG | 0.319449 | 5_1:-16130865 | Msa0720210:CDS |
| AAATAACATTATGATACTTT+AGG | 0.323392 | 5_1:+16126840 | None:intergenic |
| TTGGTATGAATAATACTAAT+AGG | 0.344849 | 5_1:-16132296 | Msa0720210:CDS |
| AATGAAGCTTCAGCTTCTTC+AGG | 0.346522 | 5_1:-16129745 | Msa0720210:intron |
| CACGAGAAATGGTTGAGAAT+TGG | 0.370382 | 5_1:-16128295 | Msa0720210:CDS |
| TCTTCAACCGCCGCAGAGTT+AGG | 0.376976 | 5_1:+16132444 | None:intergenic |
| GCATGGTAACCGGACGAATT+CGG | 0.380989 | 5_1:+16130106 | None:intergenic |
| TTTGATGAGGAGATTAGATT+AGG | 0.382386 | 5_1:-16130874 | Msa0720210:CDS |
| AGGCGCGGGTCTAAACATTA+TGG | 0.385990 | 5_1:-16127127 | Msa0720210:CDS |
| CAGATCCATATGGACATTAC+AGG | 0.386796 | 5_1:-16128426 | Msa0720210:intron |
| TAATACAATAAATATAAATT+GGG | 0.387587 | 5_1:-16126983 | Msa0720210:three_prime_UTR |
| GTGTGCTGTTTGCAACCTTT+TGG | 0.388239 | 5_1:+16127103 | None:intergenic |
| ATCATAATCATCTTCTTCCT+TGG | 0.393236 | 5_1:+16132335 | None:intergenic |
| TCAACAACCTCAGGGGAAAC+TGG | 0.397891 | 5_1:+16132420 | None:intergenic |
| TGATTTACAGTTGGGTAGAA+TGG | 0.399214 | 5_1:-16130927 | Msa0720210:CDS |
| TATTGTATTACAAAACTCAT+TGG | 0.405682 | 5_1:+16126996 | None:intergenic |
| GAAGCTGAAGCTTCATTTCA+AGG | 0.415288 | 5_1:+16129751 | None:intergenic |
| TATTTACAATCTCTGTTAAG+TGG | 0.418287 | 5_1:-16131023 | Msa0720210:CDS |
| AACGTAGCGAAGTTTCGATT+TGG | 0.420383 | 5_1:+16132494 | None:intergenic |
| TATGTTTGAAACATCATTAA+CGG | 0.421693 | 5_1:-16132611 | Msa0720210:five_prime_UTR |
| TTAACAGAGATTGTAAATAT+AGG | 0.441758 | 5_1:+16131027 | None:intergenic |
| TACAATCTCTGTTAAGTGGC+TGG | 0.446958 | 5_1:-16131019 | Msa0720210:CDS |
| AGGTGAAGAAACAATAAGTT+CGG | 0.451785 | 5_1:+16132464 | None:intergenic |
| CCATACCTGTAATGTCCATA+TGG | 0.460598 | 5_1:+16128421 | None:intergenic |
| CTGTTGACATCAACAACCTC+AGG | 0.469599 | 5_1:+16132411 | None:intergenic |
| ATAAGTAGCAGTAATGGCTT+TGG | 0.471232 | 5_1:+16127164 | None:intergenic |
| TGAATTGTTCCCACGAGAAA+TGG | 0.474972 | 5_1:-16128306 | Msa0720210:CDS |
| TTTAAGTTTATGTTCCAAGT+TGG | 0.477425 | 5_1:-16130983 | Msa0720210:CDS |
| TCCTGGCGAGGATTTATTCG+TGG | 0.481150 | 5_1:+16128269 | None:intergenic |
| TACAAGGTGTTTCACATCTC+GGG | 0.483714 | 5_1:+16129871 | None:intergenic |
| CTTTACATGTATCTGTGTAA+AGG | 0.484010 | 5_1:+16130052 | None:intergenic |
| GCAGGAAGTGATTTACAGTT+GGG | 0.487041 | 5_1:-16130935 | Msa0720210:CDS |
| TCTAAACATTATGGACCAAA+AGG | 0.491973 | 5_1:-16127118 | Msa0720210:CDS |
| TCGGTGGCTCAGCTTGTCCT+AGG | 0.492000 | 5_1:-16128214 | Msa0720210:CDS |
| TAAAGGTCTGTAAGCATTTG+CGG | 0.496607 | 5_1:+16130069 | None:intergenic |
| AAAATGAAGTGCGGTAATTG+TGG | 0.499022 | 5_1:-16128490 | Msa0720210:CDS |
| GGCAGGAAGTGATTTACAGT+TGG | 0.502635 | 5_1:-16130936 | Msa0720210:CDS |
| AATAAACATGTCAAAACAAT+CGG | 0.503126 | 5_1:+16131078 | None:intergenic |
| AATATAGGCGGTTGGTGACT+CGG | 0.504602 | 5_1:+16131042 | None:intergenic |
| TTCTCATTTGGGATTTGATG+AGG | 0.511092 | 5_1:-16130887 | Msa0720210:CDS |
| TGCAGGGAACGCCGCCATGT+TGG | 0.511963 | 5_1:-16129789 | Msa0720210:CDS |
| TGGTGACTCGGATACGACTT+AGG | 0.512582 | 5_1:+16131054 | None:intergenic |
| GTGTCGCCAATTTAATGTAA+AGG | 0.515287 | 5_1:-16128192 | Msa0720210:intron |
| TCAATTCCATCAAACATGAA+TGG | 0.521521 | 5_1:-16132558 | Msa0720210:exon |
| ATACAAGGTGTTTCACATCT+CGG | 0.522241 | 5_1:+16129870 | None:intergenic |
| CGACGAGGAATACGAACGTT+GGG | 0.522747 | 5_1:-16129946 | Msa0720210:CDS |
| CAATTCTCAACCATTTCTCG+TGG | 0.522777 | 5_1:+16128296 | None:intergenic |
| TTCGAATTTAAGAACTCGAT+CGG | 0.524733 | 5_1:-16126911 | Msa0720210:three_prime_UTR |
| CTTGACTCATCAGATCCATA+TGG | 0.530011 | 5_1:-16128436 | Msa0720210:CDS |
| GTTTGCTATAGTGAATATCC+AGG | 0.532612 | 5_1:-16130712 | Msa0720210:intron |
| ATTGATTGTGATCTCTTCCT+CGG | 0.534442 | 5_1:+16132233 | None:intergenic |
| ATGTGAAACACCTTGTATAG+AGG | 0.534686 | 5_1:-16129865 | Msa0720210:CDS |
| ACCACGAATAAATCCTCGCC+AGG | 0.534973 | 5_1:-16128270 | Msa0720210:CDS |
| ACGGCGGAAACTTGAAATTG+AGG | 0.534999 | 5_1:-16132592 | Msa0720210:five_prime_UTR |
| TGTCCATATTGAATCCAACT+TGG | 0.537263 | 5_1:+16130969 | None:intergenic |
| TTGTCATTTAAGGGAAGGGG+AGG | 0.538844 | 5_1:-16128336 | Msa0720210:intron |
| CTCGTTTACAGAGGAATCAA+AGG | 0.539325 | 5_1:-16128624 | Msa0720210:CDS |
| CATGGCGGCGTTCCCTGCAA+AGG | 0.542061 | 5_1:+16129793 | None:intergenic |
| TGTTGCATAAGTAGCAGTAA+TGG | 0.544050 | 5_1:+16127158 | None:intergenic |
| GCAACACGATTCAAACCATA+AGG | 0.547502 | 5_1:+16130850 | None:intergenic |
| GAAACTTGAAATTGAGGAGG+AGG | 0.548386 | 5_1:-16132586 | Msa0720210:five_prime_UTR |
| ATGGCGGCGTTCCCTGCAAA+GGG | 0.549512 | 5_1:+16129794 | None:intergenic |
| GCAACAAGCATGTGAGGCGC+GGG | 0.551047 | 5_1:-16127141 | Msa0720210:CDS |
| TTCAGCCTTGATACATGGAA+AGG | 0.559295 | 5_1:-16131356 | Msa0720210:CDS |
| GCAGACCTTTCCATGTATCA+AGG | 0.567121 | 5_1:+16131351 | None:intergenic |
| AAGCTGAAGCTTCATTTCAA+GGG | 0.567489 | 5_1:+16129752 | None:intergenic |
| ATGGCGATTTCTCGAACTGA+AGG | 0.567562 | 5_1:-16128520 | Msa0720210:CDS |
| TGCAACAAGCATGTGAGGCG+CGG | 0.567847 | 5_1:-16127142 | Msa0720210:CDS |
| ATGGACAGAACAACAAGGGC+AGG | 0.569567 | 5_1:-16130953 | Msa0720210:CDS |
| AGTCAAGTGCTTTGTTGCAG+AGG | 0.573825 | 5_1:+16128452 | None:intergenic |
| CAACAGGTACCGAATTCGTC+CGG | 0.578448 | 5_1:-16130115 | Msa0720210:intron |
| TTATGGTTTGAATCGTGTTG+CGG | 0.585783 | 5_1:-16130848 | Msa0720210:CDS |
| AGTTACATTTCACAATGCCA+AGG | 0.595481 | 5_1:+16127041 | None:intergenic |
| ATGTCTTGATGCAAAATGCA+AGG | 0.595604 | 5_1:-16130006 | Msa0720210:CDS |
| TCATGCATGCAATGCCAACA+TGG | 0.596649 | 5_1:+16129775 | None:intergenic |
| CTTTACACAGATACATGTAA+AGG | 0.597124 | 5_1:-16130051 | Msa0720210:CDS |
| GAACAACACCGTTGATGACG+TGG | 0.598566 | 5_1:-16132373 | Msa0720210:CDS |
| TGAAATAGGCATTACTGCGA+AGG | 0.598936 | 5_1:-16131181 | Msa0720210:CDS |
| TCGTGTTGCGGATGCACGCG+TGG | 0.599019 | 5_1:-16130836 | Msa0720210:CDS |
| TGAACTGGCCACGTCATCAA+CGG | 0.599174 | 5_1:+16132365 | None:intergenic |
| ACATTAAATTGGCGACACCT+AGG | 0.600719 | 5_1:+16128197 | None:intergenic |
| ATTTGTTGTATTTCCTGGCG+AGG | 0.605210 | 5_1:+16128257 | None:intergenic |
| AAGGGCACAACTTGGAATCA+CGG | 0.606223 | 5_1:+16128551 | None:intergenic |
| TGATCAATTGCAGCAAGATG+AGG | 0.606467 | 5_1:-16132211 | Msa0720210:intron |
| AGATTGTAAATATAGGCGGT+TGG | 0.611680 | 5_1:+16131034 | None:intergenic |
| TCGTCTTCCTCCTCTATACA+AGG | 0.613183 | 5_1:+16129855 | None:intergenic |
| GGTTGCAAACAGCACACTGA+AGG | 0.614697 | 5_1:-16127097 | Msa0720210:CDS |
| TGTTGACATCAACAACCTCA+GGG | 0.616723 | 5_1:+16132412 | None:intergenic |
| TTCTTCACCTAACTCTGCGG+CGG | 0.619774 | 5_1:-16132451 | Msa0720210:CDS |
| TCAACAAATTGAATTATCCG+AGG | 0.621205 | 5_1:-16132250 | Msa0720210:CDS |
| ATAGCATAAGCACAATGCCA+TGG | 0.625955 | 5_1:-16127074 | Msa0720210:exon |
| AAACATGTCAAAACAATCGG+TGG | 0.627900 | 5_1:+16131081 | None:intergenic |
| TGCAAGGAGATGATTCCACC+AGG | 0.628043 | 5_1:-16129990 | Msa0720210:CDS |
| ACTTATGCAACAAGCATGTG+AGG | 0.628393 | 5_1:-16127147 | Msa0720210:CDS |
| TGAAACACCTTGTATAGAGG+AGG | 0.628820 | 5_1:-16129862 | Msa0720210:CDS |
| CAAGCTGAACTCTTTCACCT+CGG | 0.630790 | 5_1:-16128233 | Msa0720210:CDS |
| AAAACACTTTCTTGGCGACG+AGG | 0.633505 | 5_1:-16129961 | Msa0720210:CDS |
| ACACAGATACATGTAAAGGA+AGG | 0.633626 | 5_1:-16130047 | Msa0720210:CDS |
| AAAATTCATCTCGTTTACAG+AGG | 0.634982 | 5_1:-16128633 | Msa0720210:CDS |
| ACAGAGATTGTAAATATAGG+CGG | 0.637777 | 5_1:+16131030 | None:intergenic |
| AATTCTCAACCATTTCTCGT+GGG | 0.639306 | 5_1:+16128297 | None:intergenic |
| GCGACGAGGAATACGAACGT+TGG | 0.641324 | 5_1:-16129947 | Msa0720210:CDS |
| TGTTTCTTCACCTAACTCTG+CGG | 0.644111 | 5_1:-16132454 | Msa0720210:CDS |
| GGCCAGTTCAAGCAAGACCA+AGG | 0.646977 | 5_1:-16132352 | Msa0720210:CDS |
| GTTGTTGTTGTGATTTGTTG+CGG | 0.647959 | 5_1:+16132523 | None:intergenic |
| GTTTGAAACATCATTAACGG+CGG | 0.666795 | 5_1:-16132608 | Msa0720210:five_prime_UTR |
| TGAAGAACCAGTTTCCCCTG+AGG | 0.673121 | 5_1:-16132427 | Msa0720210:CDS |
| TCAATATGGACAGAACAACA+AGG | 0.683069 | 5_1:-16130958 | Msa0720210:CDS |
| GCTGAACTCTTTCACCTCGG+TGG | 0.684198 | 5_1:-16128230 | Msa0720210:CDS |
| TGCATGCAATGCCAACATGG+CGG | 0.684498 | 5_1:+16129778 | None:intergenic |
| GGTTGTAACAAAATGAAGTG+CGG | 0.686749 | 5_1:-16128499 | Msa0720210:CDS |
| GCGGAAACTTGAAATTGAGG+AGG | 0.689803 | 5_1:-16132589 | Msa0720210:five_prime_UTR |
| CAATATGGACAGAACAACAA+GGG | 0.691574 | 5_1:-16130957 | Msa0720210:CDS |
| GTTGACATCAACAACCTCAG+GGG | 0.740325 | 5_1:+16132413 | None:intergenic |
| TAGGACAAGCTGAGCCACCG+AGG | 0.751223 | 5_1:+16128216 | None:intergenic |
| GAAGAGGAAGAGAATCAACG+AGG | 0.810849 | 5_1:-16126934 | Msa0720210:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAGTTATTAAATAAAAA+AGG | + | chr5_1:16129257-16129276 | None:intergenic | 10.0% |
| !!! | AGTTTTTCTTTTATAAAAAA+AGG | + | chr5_1:16129967-16129986 | None:intergenic | 10.0% |
| !!! | TAATTTTTTTAACCTAAAAA+AGG | - | chr5_1:16130704-16130723 | Msa0720210:intron | 10.0% |
| !!! | AAAGTCATATTTTTTTTTAT+AGG | + | chr5_1:16131257-16131276 | None:intergenic | 10.0% |
| !!! | TATCTTTTTATTTAATGATT+AGG | - | chr5_1:16131880-16131899 | Msa0720210:intron | 10.0% |
| !! | GTAATACAATAAATATAAAT+TGG | - | chr5_1:16132416-16132435 | Msa0720210:CDS | 10.0% |
| !!! | GATAATAATGATATTGATTT+TGG | - | chr5_1:16127085-16127104 | Msa0720210:exon | 15.0% |
| !! | TTTGTAAAAATATTGGTATT+TGG | - | chr5_1:16128925-16128944 | Msa0720210:intron | 15.0% |
| !! | AAAAAAAAACACAAAACTAA+CGG | - | chr5_1:16128973-16128992 | Msa0720210:intron | 15.0% |
| !! | AAAAAAAAACACAAAACTAT+TGG | + | chr5_1:16129104-16129123 | None:intergenic | 15.0% |
| !! | TCTATCATTTATTTCATAAT+TGG | + | chr5_1:16130469-16130488 | None:intergenic | 15.0% |
| !!! | TTTTAGGTTAAAAAAATTAC+AGG | + | chr5_1:16130703-16130722 | None:intergenic | 15.0% |
| !! | AAATAACATTATGATACTTT+AGG | + | chr5_1:16132563-16132582 | None:intergenic | 15.0% |
| !! | TTGGTATGAATAATACTAAT+AGG | - | chr5_1:16127104-16127123 | Msa0720210:CDS | 20.0% |
| !! | TTAATCTTAATTATAGTGCT+TGG | + | chr5_1:16127298-16127317 | None:intergenic | 20.0% |
| !! | AAACTTATGATAACAGTTTA+TGG | + | chr5_1:16127419-16127438 | None:intergenic | 20.0% |
| !!! | TTCTGTTATTTCAAAGTTTA+TGG | - | chr5_1:16127720-16127739 | Msa0720210:intron | 20.0% |
| !! | GTGATATTTGGAAATTTATT+TGG | - | chr5_1:16127917-16127936 | Msa0720210:intron | 20.0% |
| !! | AATAAACATGTCAAAACAAT+CGG | + | chr5_1:16128325-16128344 | None:intergenic | 20.0% |
| !! | TTAACAGAGATTGTAAATAT+AGG | + | chr5_1:16128376-16128395 | None:intergenic | 20.0% |
| !! | CTTTGTAAAAATATTGGTAT+TGG | + | chr5_1:16128924-16128943 | None:intergenic | 20.0% |
| !!! | TTTTAACAGAAAATTAACAG+AGG | - | chr5_1:16129121-16129140 | Msa0720210:intron | 20.0% |
| !! | TTTAACAGAAAATTAACAGA+GGG | - | chr5_1:16129122-16129141 | Msa0720210:intron | 20.0% |
| !! | CTTTGTAAAAATATTGGTAT+TGG | + | chr5_1:16128924-16128943 | None:intergenic | 20.0% |
| !!! | AAAAGCTAAAAAAGCATTTT+GGG | + | chr5_1:16129583-16129602 | None:intergenic | 20.0% |
| !! | TTATAAAAAAAGGCCATATT+TGG | + | chr5_1:16129957-16129976 | None:intergenic | 20.0% |
| !! | ATCCTAGATACAAATAAAAA+GGG | + | chr5_1:16130075-16130094 | None:intergenic | 20.0% |
| !!! | TTAATTTTGACCAAAAACTT+CGG | - | chr5_1:16130420-16130439 | Msa0720210:intron | 20.0% |
| !! | TCTTGTTCTAATTAGAATTT+AGG | - | chr5_1:16130530-16130549 | Msa0720210:intron | 20.0% |
| !! | TTTCTTAAAATTGGAATGTT+TGG | + | chr5_1:16131037-16131056 | None:intergenic | 20.0% |
| !! | AAAAACAGGTTTCTTAAAAT+TGG | + | chr5_1:16131046-16131065 | None:intergenic | 20.0% |
| !! | TACATACCTTTACATTAAAT+TGG | + | chr5_1:16131217-16131236 | None:intergenic | 20.0% |
| !! | TATTGTATTACAAAACTCAT+TGG | + | chr5_1:16132407-16132426 | None:intergenic | 20.0% |
| !!! | TTATTATCAAATTTTCGAAG+AGG | - | chr5_1:16132450-16132469 | Msa0720210:CDS | 20.0% |
| ! | GAGGTAATTATCAATCTAAT+TGG | - | chr5_1:16127208-16127227 | Msa0720210:intron | 25.0% |
| ! | GCGTGTTAATTAAATTAAGA+AGG | - | chr5_1:16127556-16127575 | Msa0720210:intron | 25.0% |
| ! | GCAAAACACAATTTATTGAT+TGG | - | chr5_1:16127874-16127893 | Msa0720210:intron | 25.0% |
| ! | CAAAAAAAAGAGTCATGAAT+AGG | + | chr5_1:16128159-16128178 | None:intergenic | 25.0% |
| !! | ACACATAAACATTGATGTTT+TGG | - | chr5_1:16128195-16128214 | Msa0720210:CDS | 25.0% |
| !! | CACATAAACATTGATGTTTT+GGG | - | chr5_1:16128196-16128215 | Msa0720210:CDS | 25.0% |
| ! | TATTTACAATCTCTGTTAAG+TGG | - | chr5_1:16128377-16128396 | Msa0720210:intron | 25.0% |
| !! | TTTAAGTTTATGTTCCAAGT+TGG | - | chr5_1:16128417-16128436 | Msa0720210:intron | 25.0% |
| ! | AAATTCTTCTCTTTCTCATT+TGG | - | chr5_1:16128501-16128520 | Msa0720210:CDS | 25.0% |
| ! | AATTCTTCTCTTTCTCATTT+GGG | - | chr5_1:16128502-16128521 | Msa0720210:CDS | 25.0% |
| !!! | TTGTTGTAGCTTTGTAAAAA+AGG | + | chr5_1:16128622-16128641 | None:intergenic | 25.0% |
| !!! | ATTCTTTAAGGAAGTTTTGA+TGG | + | chr5_1:16128654-16128673 | None:intergenic | 25.0% |
| ! | AACATTCATGCAATTCTTTA+AGG | + | chr5_1:16128666-16128685 | None:intergenic | 25.0% |
| ! | AGCATATATTGAAAATAACC+TGG | + | chr5_1:16128709-16128728 | None:intergenic | 25.0% |
| ! | AATCAAATTAACTTTGACCA+TGG | - | chr5_1:16128795-16128814 | Msa0720210:intron | 25.0% |
| !!! | CAATATTTTTACAAAGTGCA+GGG | + | chr5_1:16129040-16129059 | None:intergenic | 25.0% |
| ! | TTTAACAGAAAGTTAACAGA+GGG | + | chr5_1:16128952-16128971 | None:intergenic | 25.0% |
| !! | TTTTAACAGAAAGTTAACAG+AGG | + | chr5_1:16128953-16128972 | None:intergenic | 25.0% |
| ! | CTTGCACTTTGTAAAAATAT+TGG | + | chr5_1:16129042-16129061 | None:intergenic | 25.0% |
| !!! | CAATATTTTTACAAAGTGCA+AGG | - | chr5_1:16129040-16129059 | Msa0720210:intron | 25.0% |
| !!! | CAATATTTTTACAAAGTGCA+GGG | - | chr5_1:16129040-16129059 | Msa0720210:intron | 25.0% |
| ! | AAACACAAAACTATTGGTAT+TGG | + | chr5_1:16129098-16129117 | None:intergenic | 25.0% |
| !!! | CAATATTTTTACAAAGTGCA+GGG | - | chr5_1:16129040-16129059 | Msa0720210:intron | 25.0% |
| !!! | CACTTTTTTTTGTTTGGAAT+TGG | + | chr5_1:16129180-16129199 | None:intergenic | 25.0% |
| !!! | CAAAAGCTAAAAAAGCATTT+TGG | + | chr5_1:16129584-16129603 | None:intergenic | 25.0% |
| ! | GTTTACATATTACAGCAAAT+AGG | + | chr5_1:16130019-16130038 | None:intergenic | 25.0% |
| ! | AGATACAAATAAAAAGGGAA+TGG | + | chr5_1:16130070-16130089 | None:intergenic | 25.0% |
| !!! | TTCCCTTTTTATTTGTATCT+AGG | - | chr5_1:16130070-16130089 | Msa0720210:CDS | 25.0% |
| ! | CATCCTAGATACAAATAAAA+AGG | + | chr5_1:16130076-16130095 | None:intergenic | 25.0% |
| !! | TATATGACATAGAGGATTTT+TGG | - | chr5_1:16130171-16130190 | Msa0720210:intron | 25.0% |
| !!! | ATGGTTTGGATATTTTCAAA+GGG | + | chr5_1:16130281-16130300 | None:intergenic | 25.0% |
| !!! | TATGGTTTGGATATTTTCAA+AGG | + | chr5_1:16130282-16130301 | None:intergenic | 25.0% |
| ! | ACTAAGTATAAATGTGTGTT+TGG | + | chr5_1:16130359-16130378 | None:intergenic | 25.0% |
| ! | TTGGTCAAAATTAATATACG+AGG | + | chr5_1:16130414-16130433 | None:intergenic | 25.0% |
| !! | ACAAAAATTTCCGAAGTTTT+TGG | + | chr5_1:16130433-16130452 | None:intergenic | 25.0% |
| !! | AAAAACTTCGGAAATTTTTG+TGG | - | chr5_1:16130432-16130451 | Msa0720210:intron | 25.0% |
| ! | TCGTATAATAACAGTTAATG+AGG | + | chr5_1:16130585-16130604 | None:intergenic | 25.0% |
| ! | TCATTAACTGTTATTATACG+AGG | - | chr5_1:16130584-16130603 | Msa0720210:intron | 25.0% |
| !!! | GAAAAATTGAAGCCTTTTTT+AGG | + | chr5_1:16130719-16130738 | None:intergenic | 25.0% |
| !! | AAAAAAGGCTTCAATTTTTC+TGG | - | chr5_1:16130719-16130738 | Msa0720210:CDS | 25.0% |
| !!! | AAACCTGTTTTTGTCATTTA+AGG | - | chr5_1:16131054-16131073 | Msa0720210:CDS | 25.0% |
| !!! | AACCTGTTTTTGTCATTTAA+GGG | - | chr5_1:16131055-16131074 | Msa0720210:CDS | 25.0% |
| !!! | GTTTTATGCTCTAAAATGAA+TGG | - | chr5_1:16131286-16131305 | Msa0720210:intron | 25.0% |
| ! | ATTAACTTCTCAACAAAAAC+TGG | + | chr5_1:16131455-16131474 | None:intergenic | 25.0% |
| ! | AATATCTAAATTGTGAGATG+TGG | + | chr5_1:16131522-16131541 | None:intergenic | 25.0% |
| ! | CACAATTTAGATATTTGTGT+AGG | - | chr5_1:16131527-16131546 | Msa0720210:intron | 25.0% |
| !! | GATATTTGTGTAGGTAATTT+TGG | - | chr5_1:16131536-16131555 | Msa0720210:intron | 25.0% |
| ! | TTCAATCAAATCTCACTAAT+TGG | + | chr5_1:16131578-16131597 | None:intergenic | 25.0% |
| !! | CACTGTTTTGTAATTTTACA+TGG | + | chr5_1:16131604-16131623 | None:intergenic | 25.0% |
| !! | TCTGATGTATTTGCATATTT+TGG | - | chr5_1:16131695-16131714 | Msa0720210:intron | 25.0% |
| ! | ACTTTAGATACATTTCCATT+AGG | - | chr5_1:16132012-16132031 | Msa0720210:intron | 25.0% |
| !! | ATCTGTTGATGAATTCAAAA+TGG | + | chr5_1:16132183-16132202 | None:intergenic | 25.0% |
| !! | TTTTGAATTCATCAACAGAT+TGG | - | chr5_1:16132183-16132202 | Msa0720210:intron | 25.0% |
| !! | ACAATAATCACATGTTTTGT+TGG | - | chr5_1:16132208-16132227 | Msa0720210:intron | 25.0% |
| !!! | CAATAATCACATGTTTTGTT+GGG | - | chr5_1:16132209-16132228 | Msa0720210:intron | 25.0% |
| TCAATTCCATCAAACATGAA+TGG | - | chr5_1:16126842-16126861 | Msa0720210:three_prime_UTR | 30.0% | |
| AGGTGAAGAAACAATAAGTT+CGG | + | chr5_1:16126939-16126958 | None:intergenic | 30.0% | |
| ATCATAATCATCTTCTTCCT+TGG | + | chr5_1:16127068-16127087 | None:intergenic | 30.0% | |
| TCAACAAATTGAATTATCCG+AGG | - | chr5_1:16127150-16127169 | Msa0720210:CDS | 30.0% | |
| TATGCAAATAGCAACAACAA+CGG | - | chr5_1:16127633-16127652 | Msa0720210:intron | 30.0% | |
| ! | ATTGGTAATAGAGAGATAGA+TGG | - | chr5_1:16127892-16127911 | Msa0720210:intron | 30.0% |
| ! | TTATGTTTTGCAGTTACTTG+TGG | - | chr5_1:16127995-16128014 | Msa0720210:intron | 30.0% |
| ! | CTATGCCAATAACATAGTTT+TGG | - | chr5_1:16128091-16128110 | Msa0720210:intron | 30.0% |
| GTTTGCCAAAACTATGTTAT+TGG | + | chr5_1:16128099-16128118 | None:intergenic | 30.0% | |
| TCAATGTTTATGTGTATCTG+AGG | + | chr5_1:16128190-16128209 | None:intergenic | 30.0% | |
| !! | ATTGATGTTTTGGGTGAAAT+AGG | - | chr5_1:16128205-16128224 | Msa0720210:CDS | 30.0% |
| ACAGAGATTGTAAATATAGG+CGG | + | chr5_1:16128373-16128392 | None:intergenic | 30.0% | |
| TTTGATGAGGAGATTAGATT+AGG | - | chr5_1:16128526-16128545 | Msa0720210:CDS | 30.0% | |
| AATATTAAGTCAGGCATAGT+GGG | + | chr5_1:16128744-16128763 | None:intergenic | 30.0% | |
| TCAACTACGAATATTAAGTC+AGG | + | chr5_1:16128753-16128772 | None:intergenic | 30.0% | |
| !!! | CACTTTTTTTTGTTTGGCAT+TGG | - | chr5_1:16128893-16128912 | Msa0720210:intron | 30.0% |
| !! | CCAATATTTTTACAAAGTGC+AGG | + | chr5_1:16129039-16129058 | None:intergenic | 30.0% |
| CCTGCACTTTGTAAAAATAT+TGG | - | chr5_1:16128918-16128937 | Msa0720210:intron | 30.0% | |
| CCTGCACTTTGTAAAAATAT+TGG | + | chr5_1:16128918-16128937 | None:intergenic | 30.0% | |
| !! | CCAATATTTTTACAAAGTGC+AGG | - | chr5_1:16129039-16129058 | Msa0720210:intron | 30.0% |
| CCTGCACTTTGTAAAAATAT+TGG | + | chr5_1:16128918-16128937 | None:intergenic | 30.0% | |
| !! | CCAATATTTTTACAAAGTGC+AGG | - | chr5_1:16129039-16129058 | Msa0720210:intron | 30.0% |
| ! | TCCAAACAAAAAAAAGTGCA+AGG | - | chr5_1:16129182-16129201 | Msa0720210:intron | 30.0% |
| !!! | TCCTTGCACTTTTTTTTGTT+TGG | + | chr5_1:16129186-16129205 | None:intergenic | 30.0% |
| AAAAATGTTTGCATGGTAAC+CGG | + | chr5_1:16129307-16129326 | None:intergenic | 30.0% | |
| CTTTACATGTATCTGTGTAA+AGG | + | chr5_1:16129351-16129370 | None:intergenic | 30.0% | |
| CTTTACACAGATACATGTAA+AGG | - | chr5_1:16129349-16129368 | Msa0720210:intron | 30.0% | |
| ATATATGTCCAGAAGTTCAT+AGG | - | chr5_1:16129684-16129703 | Msa0720210:intron | 30.0% | |
| GAGTTAATCAAAATGTGCTA+TGG | + | chr5_1:16129826-16129845 | None:intergenic | 30.0% | |
| !!! | ACTACCTAGTTTTGCTATTA+GGG | - | chr5_1:16129863-16129882 | Msa0720210:CDS | 30.0% |
| ! | AAAAGCTTTTGGACAAACTA+TGG | + | chr5_1:16130300-16130319 | None:intergenic | 30.0% |
| ! | ATAGTTTGGGAAAAAGCTTT+TGG | + | chr5_1:16130311-16130330 | None:intergenic | 30.0% |
| ! | TTTTCCCAAACTATAGCTTT+TGG | - | chr5_1:16130317-16130336 | Msa0720210:intron | 30.0% |
| AATGCCAAAAGCTATAGTTT+GGG | + | chr5_1:16130324-16130343 | None:intergenic | 30.0% | |
| AAAATTCATCTCGTTTACAG+AGG | - | chr5_1:16130767-16130786 | Msa0720210:CDS | 30.0% | |
| AAATCGCCATATCACAAAAA+GGG | + | chr5_1:16130870-16130889 | None:intergenic | 30.0% | |
| !!! | GCTTTAGAAATTCTTTTGCA+TGG | - | chr5_1:16131001-16131020 | Msa0720210:CDS | 30.0% |
| TTCCCTTAAATGACAAAAAC+AGG | + | chr5_1:16131060-16131079 | None:intergenic | 30.0% | |
| !! | TGTTTTTGTCATTTAAGGGA+AGG | - | chr5_1:16131059-16131078 | Msa0720210:CDS | 30.0% |
| !! | GTTTTTGTCATTTAAGGGAA+GGG | - | chr5_1:16131060-16131079 | Msa0720210:CDS | 30.0% |
| !! | TTTTTGTCATTTAAGGGAAG+GGG | - | chr5_1:16131061-16131080 | Msa0720210:CDS | 30.0% |
| !! | CTTGTATTTGTTGTATTTCC+TGG | + | chr5_1:16131151-16131170 | None:intergenic | 30.0% |
| TTTAATGATTGCTGAGTTAC+TGG | - | chr5_1:16131309-16131328 | Msa0720210:intron | 30.0% | |
| ACAAAACAGTGAAATCTGAT+TGG | - | chr5_1:16131613-16131632 | Msa0720210:intron | 30.0% | |
| !!! | GTTAGTTTTTAGGGAATCAT+AGG | + | chr5_1:16131917-16131936 | None:intergenic | 30.0% |
| !!! | ACAGAGTTGGTTAGTTTTTA+GGG | + | chr5_1:16131926-16131945 | None:intergenic | 30.0% |
| !!! | AACAGAGTTGGTTAGTTTTT+AGG | + | chr5_1:16131927-16131946 | None:intergenic | 30.0% |
| !!! | GGTATTTTAATTGTTCAGCA+TGG | + | chr5_1:16132044-16132063 | None:intergenic | 30.0% |
| GAGAAAATCATGGTCATTAT+GGG | + | chr5_1:16132065-16132084 | None:intergenic | 30.0% | |
| TGAGAAAATCATGGTCATTA+TGG | + | chr5_1:16132066-16132085 | None:intergenic | 30.0% | |
| ! | TCAATAGATAAGTTTGAGAC+AGG | + | chr5_1:16132104-16132123 | None:intergenic | 30.0% |
| TCTAAACATTATGGACCAAA+AGG | - | chr5_1:16132282-16132301 | Msa0720210:CDS | 30.0% | |
| TTCGAATTTAAGAACTCGAT+CGG | - | chr5_1:16132489-16132508 | Msa0720210:CDS | 30.0% | |
| ! | GTTTGAAACATCATTAACGG+CGG | - | chr5_1:16126792-16126811 | Msa0720210:three_prime_UTR | 35.0% |
| CTACTACCATTCATGTTTGA+TGG | + | chr5_1:16126851-16126870 | None:intergenic | 35.0% | |
| !! | GTTGTTGTTGTGATTTGTTG+CGG | + | chr5_1:16126880-16126899 | None:intergenic | 35.0% |
| ATTGATTGTGATCTCTTCCT+CGG | + | chr5_1:16127170-16127189 | None:intergenic | 35.0% | |
| AATTATAGTGCTTGGTACGT+AGG | + | chr5_1:16127290-16127309 | None:intergenic | 35.0% | |
| TAGAAGTGATGACATGTGTT+AGG | - | chr5_1:16127523-16127542 | Msa0720210:intron | 35.0% | |
| CTACAACGTAATTATGTCTC+CGG | - | chr5_1:16127671-16127690 | Msa0720210:intron | 35.0% | |
| AAGAGCCATAACAACATATG+TGG | - | chr5_1:16127847-16127866 | Msa0720210:intron | 35.0% | |
| AGATAGATGGACGTGATATT+TGG | - | chr5_1:16127905-16127924 | Msa0720210:intron | 35.0% | |
| ! | CTTGTGGTGGAATCAATTTA+TGG | - | chr5_1:16128011-16128030 | Msa0720210:intron | 35.0% |
| GTTTATGTGTATCTGAGGAA+AGG | + | chr5_1:16128185-16128204 | None:intergenic | 35.0% | |
| AAACATGTCAAAACAATCGG+TGG | + | chr5_1:16128322-16128341 | None:intergenic | 35.0% | |
| AGATTGTAAATATAGGCGGT+TGG | + | chr5_1:16128369-16128388 | None:intergenic | 35.0% | |
| ! | GTTCCAAGTTGGATTCAATA+TGG | - | chr5_1:16128428-16128447 | Msa0720210:CDS | 35.0% |
| TGTCCATATTGAATCCAACT+TGG | + | chr5_1:16128434-16128453 | None:intergenic | 35.0% | |
| TCAATATGGACAGAACAACA+AGG | - | chr5_1:16128442-16128461 | Msa0720210:CDS | 35.0% | |
| CAATATGGACAGAACAACAA+GGG | - | chr5_1:16128443-16128462 | Msa0720210:CDS | 35.0% | |
| TGATTTACAGTTGGGTAGAA+TGG | - | chr5_1:16128473-16128492 | Msa0720210:CDS | 35.0% | |
| ! | TTCTCATTTGGGATTTGATG+AGG | - | chr5_1:16128513-16128532 | Msa0720210:CDS | 35.0% |
| GAGATTAGATTAGGTCCTTA+TGG | - | chr5_1:16128535-16128554 | Msa0720210:CDS | 35.0% | |
| TTATGGTTTGAATCGTGTTG+CGG | - | chr5_1:16128552-16128571 | Msa0720210:CDS | 35.0% | |
| !! | GTTTGCTATAGTGAATATCC+AGG | - | chr5_1:16128688-16128707 | Msa0720210:intron | 35.0% |
| GAATATTAAGTCAGGCATAG+TGG | + | chr5_1:16128745-16128764 | None:intergenic | 35.0% | |
| !! | AATTTGATTTGAGCAAGCGT+GGG | + | chr5_1:16128784-16128803 | None:intergenic | 35.0% |
| !! | TAATTTGATTTGAGCAAGCG+TGG | + | chr5_1:16128785-16128804 | None:intergenic | 35.0% |
| ! | ATGACAATTGGTGGATAAAG+TGG | + | chr5_1:16128833-16128852 | None:intergenic | 35.0% |
| CTTTATCCACCAATTGTCAT+TGG | - | chr5_1:16128833-16128852 | Msa0720210:intron | 35.0% | |
| ! | CAAAATCTGATGAAAGTGCA+GGG | + | chr5_1:16128860-16128879 | None:intergenic | 35.0% |
| !! | CTTTCATCAGATTTTGGCAT+TGG | - | chr5_1:16128864-16128883 | Msa0720210:intron | 35.0% |
| !!! | TCCCTGCACTTTTTTTTGTT+TGG | - | chr5_1:16128887-16128906 | Msa0720210:intron | 35.0% |
| ! | GCCAAACAAAAAAAAGTGCA+GGG | + | chr5_1:16128891-16128910 | None:intergenic | 35.0% |
| ! | TGCCAAACAAAAAAAAGTGC+AGG | + | chr5_1:16128892-16128911 | None:intergenic | 35.0% |
| !! | CTTTCATCAGATTTTGGCAT+TGG | + | chr5_1:16128864-16128883 | None:intergenic | 35.0% |
| !! | CAAAATCTGATGAAAGTGCT+GGG | - | chr5_1:16129213-16129232 | Msa0720210:intron | 35.0% |
| AACTTTCTTTGTCATCCAAC+AGG | - | chr5_1:16129269-16129288 | Msa0720210:intron | 35.0% | |
| CGGCAAAAAAAATGTTTGCA+TGG | + | chr5_1:16129314-16129333 | None:intergenic | 35.0% | |
| TAAAGGTCTGTAAGCATTTG+CGG | + | chr5_1:16129334-16129353 | None:intergenic | 35.0% | |
| ACACAGATACATGTAAAGGA+AGG | - | chr5_1:16129353-16129372 | Msa0720210:intron | 35.0% | |
| ATGTCTTGATGCAAAATGCA+AGG | - | chr5_1:16129394-16129413 | Msa0720210:intron | 35.0% | |
| !!! | AGAAAGTGTTTTAAAAGGCC+TGG | + | chr5_1:16129431-16129450 | None:intergenic | 35.0% |
| !!! | GGCCTTTTAAAACACTTTCT+TGG | - | chr5_1:16129431-16129450 | Msa0720210:intron | 35.0% |
| !!! | CGCCAAGAAAGTGTTTTAAA+AGG | + | chr5_1:16129436-16129455 | None:intergenic | 35.0% |
| ! | ATACAAGGTGTTTCACATCT+CGG | + | chr5_1:16129533-16129552 | None:intergenic | 35.0% |
| ATGTGAAACACCTTGTATAG+AGG | - | chr5_1:16129535-16129554 | Msa0720210:intron | 35.0% | |
| AAGCTGAAGCTTCATTTCAA+GGG | + | chr5_1:16129651-16129670 | None:intergenic | 35.0% | |
| TAACCAGTGATGTCAAATAG+TGG | - | chr5_1:16129793-16129812 | Msa0720210:CDS | 35.0% | |
| !!! | CACTACCTAGTTTTGCTATT+AGG | - | chr5_1:16129862-16129881 | Msa0720210:CDS | 35.0% |
| ATTGCCCTAATAGCAAAACT+AGG | + | chr5_1:16129870-16129889 | None:intergenic | 35.0% | |
| TTTCTAATGCCCCTAAAAAC+TGG | + | chr5_1:16129906-16129925 | None:intergenic | 35.0% | |
| AGTGTAGCTTACATATTGCA+AGG | + | chr5_1:16130041-16130060 | None:intergenic | 35.0% | |
| CTATCTGCTATATGACATAG+AGG | - | chr5_1:16130163-16130182 | Msa0720210:intron | 35.0% | |
| GGCAAAGATTAAGTTAAGAG+CGG | + | chr5_1:16130233-16130252 | None:intergenic | 35.0% | |
| AAGGGAGATTCAAACATGAT+TGG | + | chr5_1:16130263-16130282 | None:intergenic | 35.0% | |
| ! | CTTTTGGACAAACTATGGTT+TGG | + | chr5_1:16130295-16130314 | None:intergenic | 35.0% |
| GAATGCCAAAAGCTATAGTT+TGG | + | chr5_1:16130325-16130344 | None:intergenic | 35.0% | |
| ! | ATAGCTTTTGGCATTCCAAA+TGG | - | chr5_1:16130329-16130348 | Msa0720210:intron | 35.0% |
| ! | TAGCTTTTGGCATTCCAAAT+GGG | - | chr5_1:16130330-16130349 | Msa0720210:intron | 35.0% |
| ACAGTTACGTTGTTGATGTA+AGG | + | chr5_1:16130505-16130524 | None:intergenic | 35.0% | |
| ACATCAACAACGTAACTGTT+TGG | - | chr5_1:16130506-16130525 | Msa0720210:intron | 35.0% | |
| !! | ATTTTGACGATCCTATGACA+AGG | + | chr5_1:16130752-16130771 | None:intergenic | 35.0% |
| GAAATCGCCATATCACAAAA+AGG | + | chr5_1:16130871-16130890 | None:intergenic | 35.0% | |
| GGTTGTAACAAAATGAAGTG+CGG | - | chr5_1:16130901-16130920 | Msa0720210:CDS | 35.0% | |
| AAAATGAAGTGCGGTAATTG+TGG | - | chr5_1:16130910-16130929 | Msa0720210:CDS | 35.0% | |
| AATTCTCAACCATTTCTCGT+GGG | + | chr5_1:16131106-16131125 | None:intergenic | 35.0% | |
| GTGTCGCCAATTTAATGTAA+AGG | - | chr5_1:16131208-16131227 | Msa0720210:CDS | 35.0% | |
| !! | AGACTTGTGGTTCTAGTATT+AGG | - | chr5_1:16131357-16131376 | Msa0720210:CDS | 35.0% |
| GATTACAAGAGCTATATCAC+AGG | + | chr5_1:16131395-16131414 | None:intergenic | 35.0% | |
| ACTTCTCAACAAAAACTGGA+AGG | + | chr5_1:16131451-16131470 | None:intergenic | 35.0% | |
| ! | AATGTGCTTTTGCAACTCAA+AGG | - | chr5_1:16131855-16131874 | Msa0720210:intron | 35.0% |
| TAACCAACTCTGTTAGAAAG+TGG | - | chr5_1:16131933-16131952 | Msa0720210:intron | 35.0% | |
| AACCAACTCTGTTAGAAAGT+GGG | - | chr5_1:16131934-16131953 | Msa0720210:intron | 35.0% | |
| ! | ATGACCATGATTTTCTCAAG+TGG | - | chr5_1:16132068-16132087 | Msa0720210:intron | 35.0% |
| AGTTCCACTTGAGAAAATCA+TGG | + | chr5_1:16132075-16132094 | None:intergenic | 35.0% | |
| ATAAGTAGCAGTAATGGCTT+TGG | + | chr5_1:16132239-16132258 | None:intergenic | 35.0% | |
| TGTTGCATAAGTAGCAGTAA+TGG | + | chr5_1:16132245-16132264 | None:intergenic | 35.0% | |
| TCACAATGCCAAGGAAAAAA+TGG | + | chr5_1:16132353-16132372 | None:intergenic | 35.0% | |
| AGTTACATTTCACAATGCCA+AGG | + | chr5_1:16132362-16132381 | None:intergenic | 35.0% | |
| GAAACTTGAAATTGAGGAGG+AGG | - | chr5_1:16126814-16126833 | Msa0720210:three_prime_UTR | 40.0% | |
| AACGTAGCGAAGTTTCGATT+TGG | + | chr5_1:16126909-16126928 | None:intergenic | 40.0% | |
| TGTTTCTTCACCTAACTCTG+CGG | - | chr5_1:16126946-16126965 | Msa0720210:three_prime_UTR | 40.0% | |
| TGTTGACATCAACAACCTCA+GGG | + | chr5_1:16126991-16127010 | None:intergenic | 40.0% | |
| TGATCAATTGCAGCAAGATG+AGG | - | chr5_1:16127189-16127208 | Msa0720210:CDS | 40.0% | |
| CACAATAAGCTATTCCAAGC+AGG | - | chr5_1:16127459-16127478 | Msa0720210:intron | 40.0% | |
| ACAACAACGGTTTATTCACG+AGG | - | chr5_1:16127646-16127665 | Msa0720210:intron | 40.0% | |
| AGCCATAACAACATATGTGG+TGG | - | chr5_1:16127850-16127869 | Msa0720210:intron | 40.0% | |
| CTCCACCACATATGTTGTTA+TGG | + | chr5_1:16127855-16127874 | None:intergenic | 40.0% | |
| ! | TGTTTTGCAGTTACTTGTGG+TGG | - | chr5_1:16127998-16128017 | Msa0720210:intron | 40.0% |
| ! | ACGTTTTCAGCCTTGATACA+TGG | - | chr5_1:16128039-16128058 | Msa0720210:intron | 40.0% |
| TTCAGCCTTGATACATGGAA+AGG | - | chr5_1:16128044-16128063 | Msa0720210:intron | 40.0% | |
| TGAAATAGGCATTACTGCGA+AGG | - | chr5_1:16128219-16128238 | Msa0720210:CDS | 40.0% | |
| TACAATCTCTGTTAAGTGGC+TGG | - | chr5_1:16128381-16128400 | Msa0720210:intron | 40.0% | |
| GCAGGAAGTGATTTACAGTT+GGG | - | chr5_1:16128465-16128484 | Msa0720210:CDS | 40.0% | |
| GCAACACGATTCAAACCATA+AGG | + | chr5_1:16128553-16128572 | None:intergenic | 40.0% | |
| AGTGGAAGACATAACAACCA+TGG | + | chr5_1:16128815-16128834 | None:intergenic | 40.0% | |
| ! | CCAAAATCTGATGAAAGTGC+AGG | + | chr5_1:16129212-16129231 | None:intergenic | 40.0% |
| ! | CCTGCACTTTCATCAGATTT+TGG | - | chr5_1:16128858-16128877 | Msa0720210:intron | 40.0% |
| !! | ATATTGGTATTGGTGCCATG+TGG | + | chr5_1:16129026-16129045 | None:intergenic | 40.0% |
| ! | CCAGCACTTTCATCAGATTT+TGG | + | chr5_1:16129215-16129234 | None:intergenic | 40.0% |
| ! | CCAAAATCTGATGAAAGTGC+TGG | - | chr5_1:16129212-16129231 | Msa0720210:intron | 40.0% |
| !!! | AAGTGTTTTAAAAGGCCTGG+TGG | + | chr5_1:16129428-16129447 | None:intergenic | 40.0% |
| ! | TACAAGGTGTTTCACATCTC+GGG | + | chr5_1:16129532-16129551 | None:intergenic | 40.0% |
| TGAAACACCTTGTATAGAGG+AGG | - | chr5_1:16129538-16129557 | Msa0720210:intron | 40.0% | |
| !! | TTAGCTTTTGTACCCTTTGC+AGG | - | chr5_1:16129594-16129613 | Msa0720210:intron | 40.0% |
| ! | TAGCTTTTGTACCCTTTGCA+GGG | - | chr5_1:16129595-16129614 | Msa0720210:intron | 40.0% |
| GAAGCTGAAGCTTCATTTCA+AGG | + | chr5_1:16129652-16129671 | None:intergenic | 40.0% | |
| AATGAAGCTTCAGCTTCTTC+AGG | - | chr5_1:16129655-16129674 | Msa0720210:intron | 40.0% | |
| TAGCAGATTGCGGAAAATTG+AGG | + | chr5_1:16130201-16130220 | None:intergenic | 40.0% | |
| GTGTTATCAGTAGCAGATTG+CGG | + | chr5_1:16130211-16130230 | None:intergenic | 40.0% | |
| TCAAACATGATTGGCATAGC+TGG | + | chr5_1:16130254-16130273 | None:intergenic | 40.0% | |
| TGTGTGTTTGGATTCCCATT+TGG | + | chr5_1:16130347-16130366 | None:intergenic | 40.0% | |
| AGTTAATGAGGAAATCCCAC+AGG | + | chr5_1:16130573-16130592 | None:intergenic | 40.0% | |
| TGTCAAAGTACATGTCTCTG+TGG | + | chr5_1:16130671-16130690 | None:intergenic | 40.0% | |
| CTCGTTTACAGAGGAATCAA+AGG | - | chr5_1:16130776-16130795 | Msa0720210:CDS | 40.0% | |
| ! | ATCACAAAAAGGGCACAACT+TGG | + | chr5_1:16130860-16130879 | None:intergenic | 40.0% |
| ! | GTTGTGCCCTTTTTGTGATA+TGG | - | chr5_1:16130861-16130880 | Msa0720210:CDS | 40.0% |
| CTTGACTCATCAGATCCATA+TGG | - | chr5_1:16130964-16130983 | Msa0720210:CDS | 40.0% | |
| CAGATCCATATGGACATTAC+AGG | - | chr5_1:16130974-16130993 | Msa0720210:CDS | 40.0% | |
| CCATACCTGTAATGTCCATA+TGG | + | chr5_1:16130982-16131001 | None:intergenic | 40.0% | |
| CCATATGGACATTACAGGTA+TGG | - | chr5_1:16130979-16130998 | Msa0720210:CDS | 40.0% | |
| TGAATTGTTCCCACGAGAAA+TGG | - | chr5_1:16131094-16131113 | Msa0720210:CDS | 40.0% | |
| CAATTCTCAACCATTTCTCG+TGG | + | chr5_1:16131107-16131126 | None:intergenic | 40.0% | |
| CACGAGAAATGGTTGAGAAT+TGG | - | chr5_1:16131105-16131124 | Msa0720210:CDS | 40.0% | |
| !! | ATTTGTTGTATTTCCTGGCG+AGG | + | chr5_1:16131146-16131165 | None:intergenic | 40.0% |
| ACATTAAATTGGCGACACCT+AGG | + | chr5_1:16131206-16131225 | None:intergenic | 40.0% | |
| ATGTTGCATGTTGAGACTTG+TGG | - | chr5_1:16131344-16131363 | Msa0720210:CDS | 40.0% | |
| TTTGCACTGTGTACTAAGTC+AGG | + | chr5_1:16131725-16131744 | None:intergenic | 40.0% | |
| TACACAGTGCAAAACCAGAA+AGG | - | chr5_1:16131732-16131751 | Msa0720210:intron | 40.0% | |
| ACCAACTCTGTTAGAAAGTG+GGG | - | chr5_1:16131935-16131954 | Msa0720210:intron | 40.0% | |
| ACTTATGCAACAAGCATGTG+AGG | - | chr5_1:16132253-16132272 | Msa0720210:CDS | 40.0% | |
| ATAGCATAAGCACAATGCCA+TGG | - | chr5_1:16132326-16132345 | Msa0720210:CDS | 40.0% | |
| ! | TTTTTACTGATCTCGTGTGC+TGG | + | chr5_1:16132600-16132619 | None:intergenic | 40.0% |
| ACGGCGGAAACTTGAAATTG+AGG | - | chr5_1:16126808-16126827 | Msa0720210:three_prime_UTR | 45.0% | |
| GCGGAAACTTGAAATTGAGG+AGG | - | chr5_1:16126811-16126830 | Msa0720210:three_prime_UTR | 45.0% | |
| GTTGACATCAACAACCTCAG+GGG | + | chr5_1:16126990-16127009 | None:intergenic | 45.0% | |
| CTGTTGACATCAACAACCTC+AGG | + | chr5_1:16126992-16127011 | None:intergenic | 45.0% | |
| !! | TTCCTTGGTCTTGCTTGAAC+TGG | + | chr5_1:16127053-16127072 | None:intergenic | 45.0% |
| ATGTCAGTGTTAGTCCTGCT+TGG | + | chr5_1:16127476-16127495 | None:intergenic | 45.0% | |
| AACCTAACTGCTCTGTTCTC+AGG | + | chr5_1:16127700-16127719 | None:intergenic | 45.0% | |
| GAAAAATACCATTGCGCTCG+TGG | - | chr5_1:16127945-16127964 | Msa0720210:intron | 45.0% | |
| GCAGACCTTTCCATGTATCA+AGG | + | chr5_1:16128052-16128071 | None:intergenic | 45.0% | |
| !! | GAAAGGTCTGCGTTGTTTTC+AGG | - | chr5_1:16128061-16128080 | Msa0720210:intron | 45.0% |
| !! | AATATAGGCGGTTGGTGACT+CGG | + | chr5_1:16128361-16128380 | None:intergenic | 45.0% |
| GGCAGGAAGTGATTTACAGT+TGG | - | chr5_1:16128464-16128483 | Msa0720210:CDS | 45.0% | |
| CCATGTGGCGTGAAATGATT+GGG | + | chr5_1:16129011-16129030 | None:intergenic | 45.0% | |
| !! | GATGAAAGTGCTGGGACTAA+AGG | - | chr5_1:16129221-16129240 | Msa0720210:intron | 45.0% |
| AAAACACTTTCTTGGCGACG+AGG | - | chr5_1:16129439-16129458 | Msa0720210:intron | 45.0% | |
| TCGTCTTCCTCCTCTATACA+AGG | + | chr5_1:16129548-16129567 | None:intergenic | 45.0% | |
| TCATGCATGCAATGCCAACA+TGG | + | chr5_1:16129628-16129647 | None:intergenic | 45.0% | |
| AAGCAGCTCCTATGAACTTC+TGG | + | chr5_1:16129695-16129714 | None:intergenic | 45.0% | |
| ! | TGTCCGCTACTCCAGTTTTT+AGG | - | chr5_1:16129892-16129911 | Msa0720210:CDS | 45.0% |
| ! | GTCCGCTACTCCAGTTTTTA+GGG | - | chr5_1:16129893-16129912 | Msa0720210:CDS | 45.0% |
| !! | TCCGCTACTCCAGTTTTTAG+GGG | - | chr5_1:16129894-16129913 | Msa0720210:CDS | 45.0% |
| ATCTGCGTGTGTGCCAAATA+TGG | - | chr5_1:16129941-16129960 | Msa0720210:CDS | 45.0% | |
| TGATCCACTAGTTGTACCTG+TGG | - | chr5_1:16130554-16130573 | Msa0720210:intron | 45.0% | |
| GATCCACTAGTTGTACCTGT+GGG | - | chr5_1:16130555-16130574 | Msa0720210:intron | 45.0% | |
| AATCCCACAGGTACAACTAG+TGG | + | chr5_1:16130561-16130580 | None:intergenic | 45.0% | |
| ACATGTCTCTGTGGACATCA+TGG | + | chr5_1:16130662-16130681 | None:intergenic | 45.0% | |
| CTGGATTTCGTCCTTGTCAT+AGG | - | chr5_1:16130738-16130757 | Msa0720210:CDS | 45.0% | |
| ! | AAGGGCACAACTTGGAATCA+CGG | + | chr5_1:16130852-16130871 | None:intergenic | 45.0% |
| ATGGCGATTTCTCGAACTGA+AGG | - | chr5_1:16130880-16130899 | Msa0720210:CDS | 45.0% | |
| ! | AGTCAAGTGCTTTGTTGCAG+AGG | + | chr5_1:16130951-16130970 | None:intergenic | 45.0% |
| ! | TTGTCATTTAAGGGAAGGGG+AGG | - | chr5_1:16131064-16131083 | Msa0720210:CDS | 45.0% |
| CAAGCTGAACTCTTTCACCT+CGG | - | chr5_1:16131167-16131186 | Msa0720210:CDS | 45.0% | |
| GAGCTATATCACAGGCTATG+AGG | + | chr5_1:16131387-16131406 | None:intergenic | 45.0% | |
| TCCCCACTTTCTAACAGAGT+TGG | + | chr5_1:16131939-16131958 | None:intergenic | 45.0% | |
| !!! | GTGTGCTGTTTGCAACCTTT+TGG | + | chr5_1:16132300-16132319 | None:intergenic | 45.0% |
| !!! | GCCATGGACCATTTTTTCCT+TGG | - | chr5_1:16132342-16132361 | Msa0720210:CDS | 45.0% |
| GCCAAGGAAAAAATGGTCCA+TGG | + | chr5_1:16132346-16132365 | None:intergenic | 45.0% | |
| GAAGAGGAAGAGAATCAACG+AGG | - | chr5_1:16132466-16132485 | Msa0720210:CDS | 45.0% | |
| !! | TAATACAATAAATATAAATT+GGG | - | chr5_1:16132417-16132436 | Msa0720210:CDS | 5.0% |
| TTCTTCACCTAACTCTGCGG+CGG | - | chr5_1:16126949-16126968 | Msa0720210:three_prime_UTR | 50.0% | |
| TGAAGAACCAGTTTCCCCTG+AGG | - | chr5_1:16126973-16126992 | Msa0720210:three_prime_UTR | 50.0% | |
| TCAACAACCTCAGGGGAAAC+TGG | + | chr5_1:16126983-16127002 | None:intergenic | 50.0% | |
| !! | GAACAACACCGTTGATGACG+TGG | - | chr5_1:16127027-16127046 | Msa0720210:three_prime_UTR | 50.0% |
| TGAACTGGCCACGTCATCAA+CGG | + | chr5_1:16127038-16127057 | None:intergenic | 50.0% | |
| GTCCTGAGAACAGAGCAGTT+AGG | - | chr5_1:16127695-16127714 | Msa0720210:intron | 50.0% | |
| GAGCAGAGTGGTATGGTACA+TGG | + | chr5_1:16127792-16127811 | None:intergenic | 50.0% | |
| ! | TGGTGACTCGGATACGACTT+AGG | + | chr5_1:16128349-16128368 | None:intergenic | 50.0% |
| ATGGACAGAACAACAAGGGC+AGG | - | chr5_1:16128447-16128466 | Msa0720210:CDS | 50.0% | |
| CAGGGACCAATGACAATTGG+TGG | + | chr5_1:16128842-16128861 | None:intergenic | 50.0% | |
| GTGCAGGGACCAATGACAAT+TGG | + | chr5_1:16128845-16128864 | None:intergenic | 50.0% | |
| ! | AAAACTAACGGAGTGCCACG+TGG | - | chr5_1:16128985-16129004 | Msa0720210:intron | 50.0% |
| CCCAATCATTTCACGCCACA+TGG | - | chr5_1:16129008-16129027 | Msa0720210:intron | 50.0% | |
| GCCATGTGGCGTGAAATGAT+TGG | + | chr5_1:16129012-16129031 | None:intergenic | 50.0% | |
| !! | CAACAGGTACCGAATTCGTC+CGG | - | chr5_1:16129285-16129304 | Msa0720210:intron | 50.0% |
| GCATGGTAACCGGACGAATT+CGG | + | chr5_1:16129297-16129316 | None:intergenic | 50.0% | |
| TGCAAGGAGATGATTCCACC+AGG | - | chr5_1:16129410-16129429 | Msa0720210:intron | 50.0% | |
| CGACGAGGAATACGAACGTT+GGG | - | chr5_1:16129454-16129473 | Msa0720210:intron | 50.0% | |
| TGCATGCAATGCCAACATGG+CGG | + | chr5_1:16129625-16129644 | None:intergenic | 50.0% | |
| GCGCCACTATTTGACATCAC+TGG | + | chr5_1:16129799-16129818 | None:intergenic | 50.0% | |
| GCCCCTAAAAACTGGAGTAG+CGG | + | chr5_1:16129898-16129917 | None:intergenic | 50.0% | |
| TGAACAGCGAAGTCACATGG+CGG | + | chr5_1:16130134-16130153 | None:intergenic | 50.0% | |
| GAGTGAACAGCGAAGTCACA+TGG | + | chr5_1:16130137-16130156 | None:intergenic | 50.0% | |
| ACCACGAATAAATCCTCGCC+AGG | - | chr5_1:16131130-16131149 | Msa0720210:CDS | 50.0% | |
| TCCTGGCGAGGATTTATTCG+TGG | + | chr5_1:16131134-16131153 | None:intergenic | 50.0% | |
| !! | TCAGCATGGAAAGCGCCTAA+TGG | + | chr5_1:16132030-16132049 | None:intergenic | 50.0% |
| AGGCGCGGGTCTAAACATTA+TGG | - | chr5_1:16132273-16132292 | Msa0720210:CDS | 50.0% | |
| GGTTGCAAACAGCACACTGA+AGG | - | chr5_1:16132303-16132322 | Msa0720210:CDS | 50.0% | |
| TCTTCAACCGCCGCAGAGTT+AGG | + | chr5_1:16126959-16126978 | None:intergenic | 55.0% | |
| GGCCAGTTCAAGCAAGACCA+AGG | - | chr5_1:16127048-16127067 | Msa0720210:three_prime_UTR | 55.0% | |
| CTGCTCTGTTCTCAGGACAC+CGG | + | chr5_1:16127693-16127712 | None:intergenic | 55.0% | |
| AGTCATCACCACGAGCGCAA+TGG | + | chr5_1:16127956-16127975 | None:intergenic | 55.0% | |
| CGTGAAATGATTGGGCCACG+TGG | + | chr5_1:16129003-16129022 | None:intergenic | 55.0% | |
| CGGACGAATTCGGTACCTGT+TGG | + | chr5_1:16129287-16129306 | None:intergenic | 55.0% | |
| GCGACGAGGAATACGAACGT+TGG | - | chr5_1:16129453-16129472 | Msa0720210:intron | 55.0% | |
| GCTGAACTCTTTCACCTCGG+TGG | - | chr5_1:16131170-16131189 | Msa0720210:CDS | 55.0% | |
| AATGCACGAGCGTGCCTTTC+TGG | + | chr5_1:16131749-16131768 | None:intergenic | 55.0% | |
| TGCAACAAGCATGTGAGGCG+CGG | - | chr5_1:16132258-16132277 | Msa0720210:CDS | 55.0% | |
| CGCAGTGGAGCAGAGTGGTA+TGG | + | chr5_1:16127799-16127818 | None:intergenic | 60.0% | |
| TAGAGCGCAGTGGAGCAGAG+TGG | + | chr5_1:16127804-16127823 | None:intergenic | 60.0% | |
| AGACAGACGCTAGAGCGCAG+TGG | + | chr5_1:16127814-16127833 | None:intergenic | 60.0% | |
| TGCGGATGCACGCGTGGTTT+CGG | - | chr5_1:16128570-16128589 | Msa0720210:CDS | 60.0% | |
| GCACGCGTGGTTTCGGGAAT+TGG | - | chr5_1:16128577-16128596 | Msa0720210:CDS | 60.0% | |
| ATGGCGGCGTTCCCTGCAAA+GGG | + | chr5_1:16129609-16129628 | None:intergenic | 60.0% | |
| TAGGACAAGCTGAGCCACCG+AGG | + | chr5_1:16131187-16131206 | None:intergenic | 60.0% | |
| TCGGTGGCTCAGCTTGTCCT+AGG | - | chr5_1:16131186-16131205 | Msa0720210:CDS | 60.0% | |
| GCAACAAGCATGTGAGGCGC+GGG | - | chr5_1:16132259-16132278 | Msa0720210:CDS | 60.0% | |
| TCGTGTTGCGGATGCACGCG+TGG | - | chr5_1:16128564-16128583 | Msa0720210:CDS | 65.0% | |
| GCGGATGCACGCGTGGTTTC+GGG | - | chr5_1:16128571-16128590 | Msa0720210:CDS | 65.0% | |
| CATGGCGGCGTTCCCTGCAA+AGG | + | chr5_1:16129610-16129629 | None:intergenic | 65.0% | |
| TGCAGGGAACGCCGCCATGT+TGG | - | chr5_1:16129611-16129630 | Msa0720210:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 16126792 | 16132630 | 16126792 | ID=Msa0720210;Name=Msa0720210 |
| chr5_1 | mRNA | 16126792 | 16132630 | 16126792 | ID=Msa0720210-mRNA-1;Parent=Msa0720210;Name=Msa0720210-mRNA-1;_AED=0.33;_eAED=0.33;_QI=65|1|1|1|1|1|7|301|616 |
| chr5_1 | exon | 16126792 | 16127221 | 16126792 | ID=Msa0720210-mRNA-1:exon:6183;Parent=Msa0720210-mRNA-1 |
| chr5_1 | exon | 16128193 | 16128346 | 16128193 | ID=Msa0720210-mRNA-1:exon:6182;Parent=Msa0720210-mRNA-1 |
| chr5_1 | exon | 16128427 | 16128662 | 16128427 | ID=Msa0720210-mRNA-1:exon:6181;Parent=Msa0720210-mRNA-1 |
| chr5_1 | exon | 16129746 | 16130131 | 16129746 | ID=Msa0720210-mRNA-1:exon:6180;Parent=Msa0720210-mRNA-1 |
| chr5_1 | exon | 16130713 | 16131229 | 16130713 | ID=Msa0720210-mRNA-1:exon:6179;Parent=Msa0720210-mRNA-1 |
| chr5_1 | exon | 16131340 | 16131414 | 16131340 | ID=Msa0720210-mRNA-1:exon:6178;Parent=Msa0720210-mRNA-1 |
| chr5_1 | exon | 16132212 | 16132630 | 16132212 | ID=Msa0720210-mRNA-1:exon:6177;Parent=Msa0720210-mRNA-1 |
| chr5_1 | five_prime_UTR | 16132566 | 16132630 | 16132566 | ID=Msa0720210-mRNA-1:five_prime_utr;Parent=Msa0720210-mRNA-1 |
| chr5_1 | CDS | 16132212 | 16132565 | 16132212 | ID=Msa0720210-mRNA-1:cds;Parent=Msa0720210-mRNA-1 |
| chr5_1 | CDS | 16131340 | 16131414 | 16131340 | ID=Msa0720210-mRNA-1:cds;Parent=Msa0720210-mRNA-1 |
| chr5_1 | CDS | 16130713 | 16131229 | 16130713 | ID=Msa0720210-mRNA-1:cds;Parent=Msa0720210-mRNA-1 |
| chr5_1 | CDS | 16129746 | 16130131 | 16129746 | ID=Msa0720210-mRNA-1:cds;Parent=Msa0720210-mRNA-1 |
| chr5_1 | CDS | 16128427 | 16128662 | 16128427 | ID=Msa0720210-mRNA-1:cds;Parent=Msa0720210-mRNA-1 |
| chr5_1 | CDS | 16128193 | 16128346 | 16128193 | ID=Msa0720210-mRNA-1:cds;Parent=Msa0720210-mRNA-1 |
| chr5_1 | CDS | 16127093 | 16127221 | 16127093 | ID=Msa0720210-mRNA-1:cds;Parent=Msa0720210-mRNA-1 |
| chr5_1 | three_prime_UTR | 16126792 | 16127092 | 16126792 | ID=Msa0720210-mRNA-1:three_prime_utr;Parent=Msa0720210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
