AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0467220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0467220 MtrunA17_Chr3g0121351 98.862 615 2 4 1 612 1 613 0.0 1227
Msa0467220 MtrunA17_Chr1g0176041 75.167 600 110 8 34 612 27 608 0.0 847
Msa0467220 MtrunA17_Chr4g0063551 60.590 576 200 12 1 562 1 563 0.0 636
Msa0467220 MtrunA17_Chr2g0330401 43.649 433 217 8 108 535 61 471 1.06e-113 348
Msa0467220 MtrunA17_Chr3g0107851 44.638 401 209 5 129 526 101 491 2.76e-107 334
Msa0467220 MtrunA17_Chr6g0449911 42.094 468 240 10 132 587 152 600 8.93e-103 327
Msa0467220 MtrunA17_Chr2g0293631 44.028 427 218 7 132 556 483 890 5.14e-101 332
Msa0467220 MtrunA17_Chr4g0076491 41.014 434 228 7 128 546 270 690 6.10e-101 322
Msa0467220 MtrunA17_Chr6g0449741 40.323 434 229 7 128 546 232 650 9.68e-100 318
Msa0467220 MtrunA17_Chr7g0270131 40.217 460 246 10 94 540 170 613 3.60e-97 314
Msa0467220 MtrunA17_Chr1g0200181 36.364 473 272 7 132 592 132 587 4.45e-94 301
Msa0467220 MtrunA17_Chr1g0157691 38.983 413 230 6 132 537 134 531 1.18e-93 300
Msa0467220 MtrunA17_Chr4g0058591 42.228 386 204 6 95 479 154 521 1.48e-88 284
Msa0467220 MtrunA17_Chr2g0277821 39.078 412 232 5 130 538 489 884 1.96e-87 294
Msa0467220 MtrunA17_Chr5g0409981 41.429 420 217 10 129 537 84 485 6.56e-87 280
Msa0467220 MtrunA17_Chr6g0461751 34.123 422 260 6 137 555 132 538 1.39e-75 250
Msa0467220 MtrunA17_Chr7g0271121 40.000 395 210 10 135 520 91 467 3.63e-74 252
Msa0467220 MtrunA17_Chr5g0442191 39.153 378 208 10 146 520 82 440 6.49e-74 248
Msa0467220 MtrunA17_Chr1g0193491 34.864 479 252 13 111 562 85 530 1.64e-72 245
Msa0467220 MtrunA17_Chr7g0263771 32.653 441 264 9 106 537 88 504 2.60e-70 238
Msa0467220 MtrunA17_Chr3g0095031 39.024 369 203 10 166 531 111 460 3.90e-69 234
Msa0467220 MtrunA17_Chr7g0236841 33.565 432 253 7 143 560 8 419 1.33e-65 221
Msa0467220 MtrunA17_Chr6g0483491 33.729 421 251 7 143 555 8 408 1.66e-65 221
Msa0467220 MtrunA17_Chr2g0297261 32.924 407 248 8 126 531 17 399 5.89e-63 213
Msa0467220 MtrunA17_Chr2g0300291 36.719 384 213 10 144 519 140 501 1.03e-62 221
Msa0467220 MtrunA17_Chr2g0310581 35.264 397 231 8 133 524 41 416 5.80e-62 213
Msa0467220 MtrunA17_Chr3g0098121 36.528 386 210 11 144 519 151 511 1.05e-61 218
Msa0467220 MtrunA17_Chr4g0070981 34.103 390 234 8 144 532 40 407 1.62e-60 207
Msa0467220 MtrunA17_Chr2g0299681 33.846 390 235 8 144 532 40 407 5.30e-59 203
Msa0467220 MtrunA17_Chr2g0329931 34.103 390 234 7 144 532 40 407 1.21e-58 202
Msa0467220 MtrunA17_Chr8g0342861 33.333 390 237 7 144 532 40 407 1.16e-57 199
Msa0467220 MtrunA17_Chr6g0475251 34.805 385 219 11 144 517 102 465 1.38e-57 205
Msa0467220 MtrunA17_Chr4g0040761 32.992 391 237 8 146 532 20 389 3.62e-55 200
Msa0467220 MtrunA17_Chr1g0204391 32.824 393 216 8 144 509 43 414 3.78e-54 194
Msa0467220 MtrunA17_Chr4g0003441 36.311 347 191 8 167 507 130 452 3.27e-52 186
Msa0467220 MtrunA17_Chr3g0114081 34.737 380 209 11 151 508 22 384 5.78e-52 188
Msa0467220 MtrunA17_Chr6g0466611 31.043 393 250 7 143 525 140 521 6.03e-52 190
Msa0467220 MtrunA17_Chr7g0247221 29.620 395 251 8 144 536 142 511 1.69e-49 179
Msa0467220 MtrunA17_Chr7g0247181 29.873 395 250 10 144 536 139 508 1.94e-49 179
Msa0467220 MtrunA17_Chr1g0149251 36.446 332 179 10 183 507 2 308 3.49e-49 174
Msa0467220 MtrunA17_Chr7g0247191 29.873 395 250 10 144 536 149 518 5.07e-49 178
Msa0467220 MtrunA17_Chr8g0386451 31.435 439 274 12 96 522 240 663 1.75e-47 178
Msa0467220 MtrunA17_Chr8g0347161 34.870 347 208 10 164 502 121 457 3.62e-47 174
Msa0467220 MtrunA17_Chr7g0236831 30.323 465 252 12 116 519 137 590 3.59e-46 174
Msa0467220 MtrunA17_Chr8g0347151 35.196 358 206 10 157 502 213 556 1.09e-45 172
Msa0467220 MtrunA17_Chr2g0307471 32.737 391 221 12 145 520 91 454 2.46e-45 169
Msa0467220 MtrunA17_Chr4g0062301 33.151 365 211 11 168 521 120 462 4.06e-45 169
Msa0467220 MtrunA17_Chr8g0347171 33.151 365 226 9 146 502 161 515 5.08e-44 166
Msa0467220 MtrunA17_Chr4g0029191 28.281 442 244 12 145 522 44 476 1.36e-42 162
Msa0467220 MtrunA17_Chr4g0034411 33.154 371 223 10 156 520 87 438 1.73e-42 163
Msa0467220 MtrunA17_Chr2g0301281 28.507 442 243 11 145 522 41 473 1.98e-42 161
Msa0467220 MtrunA17_Chr5g0443991 32.884 371 225 9 156 520 87 439 3.53e-41 159
Msa0467220 MtrunA17_Chr1g0179761 28.837 430 251 15 110 509 43 447 1.53e-36 142
Msa0467220 MtrunA17_Chr2g0309551 26.906 446 269 7 138 538 102 535 1.02e-35 141
Msa0467220 MtrunA17_Chr1g0192021 27.007 411 236 11 145 509 26 418 2.37e-34 138
Msa0467220 MtrunA17_Chr4g0074521 31.671 401 215 15 130 497 67 441 3.55e-32 130
Msa0467220 MtrunA17_Chr5g0429221 27.913 369 243 8 143 509 1 348 7.30e-32 128
Msa0467220 MtrunA17_Chr3g0145781 27.047 403 258 14 143 521 130 520 1.36e-31 129
Msa0467220 MtrunA17_Chr1g0169331 25.436 401 243 10 166 531 12 391 1.06e-28 118
Msa0467220 MtrunA17_Chr4g0004301 27.114 402 209 13 182 519 70 451 2.29e-27 116
Msa0467220 MtrunA17_Chr5g0434301 26.866 402 210 13 182 519 70 451 1.32e-26 114
Msa0467220 MtrunA17_Chr3g0137901 43.411 129 66 1 379 507 23 144 2.27e-26 106
Msa0467220 MtrunA17_Chr8g0342851 25.967 362 215 9 174 532 2 313 5.43e-25 106
Msa0467220 MtrunA17_Chr4g0039471 32.906 234 130 7 131 353 202 419 4.35e-24 105
Msa0467220 MtrunA17_Chr4g0039471 30.622 209 90 8 145 352 2 156 1.05e-16 82.8
Msa0467220 MtrunA17_Chr8g0349951 35.000 160 93 3 143 301 8 157 7.46e-24 98.2
Msa0467220 MtrunA17_Chr1g0155201 29.487 312 170 14 276 568 14 294 1.57e-23 102
Msa0467220 MtrunA17_Chr4g0062321 32.018 228 132 8 256 475 23 235 1.21e-21 94.7
Msa0467220 MtrunA17_Chr8g0354761 26.050 357 220 11 168 508 31 359 4.41e-21 96.7
Msa0467220 MtrunA17_Chr4g0025141 32.461 191 104 6 334 509 15 195 2.07e-18 85.1
Msa0467220 MtrunA17_Chr3g0137891 35.393 178 99 6 183 358 2 165 5.43e-18 83.6
Msa0467220 MtrunA17_Chr0c30g0494091 32.174 230 133 6 130 349 67 283 8.62e-18 85.9
Msa0467220 MtrunA17_Chr4g0058601 47.368 76 40 0 469 544 9 84 1.85e-16 75.9
Msa0467220 MtrunA17_Chr8g0364251 33.113 151 92 3 407 555 438 581 2.75e-15 79.3
Msa0467220 MtrunA17_Chr3g0108851 22.824 425 259 14 169 572 19 395 5.71e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0467220 AT2G42520.2 74.746 590 110 11 1 564 1 577 0.0 829
Msa0467220 AT2G42520.1 74.746 590 110 11 1 564 1 577 0.0 829
Msa0467220 AT2G42520.3 74.746 590 110 11 1 564 1 577 0.0 829
Msa0467220 AT3G58570.1 73.142 592 107 9 3 569 4 568 0.0 806
Msa0467220 AT3G58510.1 73.604 591 104 12 1 564 1 566 0.0 796
Msa0467220 AT3G58510.3 73.604 591 104 12 1 564 1 566 0.0 796
Msa0467220 AT3G58510.2 73.604 591 104 12 1 564 1 566 0.0 796
Msa0467220 AT5G63120.2 45.833 432 207 8 109 535 132 541 6.85e-117 360
Msa0467220 AT1G55150.1 40.980 449 238 8 87 530 44 470 1.18e-110 341
Msa0467220 AT5G14610.2 44.681 423 214 6 132 552 149 553 1.48e-110 345
Msa0467220 AT5G14610.6 44.681 423 214 6 132 552 149 553 1.64e-110 345
Msa0467220 AT5G14610.5 44.681 423 214 6 132 552 157 561 1.97e-110 345
Msa0467220 AT1G55150.2 39.749 478 256 9 87 554 69 524 6.71e-110 340
Msa0467220 AT3G01540.1 44.787 422 211 7 132 551 146 547 4.15e-108 338
Msa0467220 AT3G01540.4 44.787 422 211 7 132 551 146 547 4.17e-108 338
Msa0467220 AT3G01540.2 44.787 422 211 7 132 551 146 547 4.17e-108 338
Msa0467220 AT3G01540.3 44.787 422 211 7 132 551 146 547 4.17e-108 338
Msa0467220 AT5G14610.7 45.780 391 192 6 164 552 50 422 1.37e-103 323
Msa0467220 AT5G14610.3 45.780 391 192 6 164 552 50 422 1.37e-103 323
Msa0467220 AT5G14610.1 44.203 414 211 6 141 552 226 621 5.03e-103 328
Msa0467220 AT2G33730.1 40.553 434 230 6 128 546 297 717 4.40e-100 321
Msa0467220 AT3G06480.1 41.995 431 226 7 132 556 423 835 7.00e-96 317
Msa0467220 AT2G47330.1 40.173 463 240 10 95 540 168 610 8.69e-96 310
Msa0467220 AT5G51280.1 36.730 471 273 8 132 592 134 589 1.01e-94 303
Msa0467220 AT1G20920.2 39.614 414 231 6 128 538 175 572 1.18e-93 306
Msa0467220 AT1G20920.4 39.614 414 231 6 128 538 513 910 1.04e-91 307
Msa0467220 AT1G20920.6 39.614 414 231 6 128 538 513 910 1.04e-91 307
Msa0467220 AT1G20920.3 39.614 414 231 6 128 538 513 910 1.04e-91 307
Msa0467220 AT1G20920.7 39.614 414 231 6 128 538 513 910 1.04e-91 307
Msa0467220 AT1G20920.5 39.614 414 231 6 128 538 513 910 1.04e-91 307
Msa0467220 AT1G20920.1 39.614 414 231 6 128 538 513 910 1.04e-91 307
Msa0467220 AT4G33370.1 38.015 413 234 6 132 537 85 482 1.55e-91 293
Msa0467220 AT1G31970.1 42.680 403 205 9 143 537 115 499 1.06e-89 288
Msa0467220 AT5G63120.1 44.384 365 176 8 109 468 132 474 3.48e-88 282
Msa0467220 AT5G63120.3 44.384 365 176 8 109 468 132 474 4.68e-88 282
Msa0467220 AT5G63120.4 44.384 365 176 8 109 468 132 474 4.68e-88 282
Msa0467220 AT5G63120.5 44.384 365 176 8 109 468 132 474 4.68e-88 282
Msa0467220 AT5G14610.4 43.642 346 175 6 132 475 157 484 3.31e-84 273
Msa0467220 AT1G28180.1 41.444 374 201 6 174 546 3 359 4.98e-81 260
Msa0467220 AT3G09620.1 38.929 411 202 9 125 531 376 741 7.88e-79 269
Msa0467220 AT3G09620.2 38.929 411 202 9 125 531 377 742 8.30e-79 269
Msa0467220 AT3G02065.3 34.824 425 261 6 129 552 95 504 3.67e-78 257
Msa0467220 AT3G02065.2 34.824 425 261 6 129 552 95 504 3.67e-78 257
Msa0467220 AT3G06480.2 41.954 348 182 6 132 477 423 752 5.45e-75 255
Msa0467220 AT3G22330.1 39.459 370 202 10 166 532 126 476 1.46e-73 248
Msa0467220 AT5G60990.1 34.298 449 274 6 143 582 8 444 4.75e-72 239
Msa0467220 AT3G22310.2 38.642 383 213 10 166 545 138 501 6.13e-72 243
Msa0467220 AT3G22310.1 38.642 383 213 10 166 545 138 501 8.46e-72 243
Msa0467220 AT3G09720.2 31.973 441 264 10 108 534 92 510 4.48e-68 231
Msa0467220 AT3G09720.1 31.973 441 264 10 108 534 92 510 4.48e-68 231
Msa0467220 AT5G26742.1 38.684 380 211 8 146 520 104 466 5.63e-68 235
Msa0467220 AT5G26742.2 38.684 380 211 8 146 520 104 466 5.72e-68 235
Msa0467220 AT3G02065.1 33.858 381 236 6 173 552 2 367 6.21e-68 226
Msa0467220 AT5G26742.3 41.092 348 183 9 178 520 43 373 1.72e-65 227
Msa0467220 AT1G16280.1 37.127 369 207 7 159 521 70 419 4.33e-65 222
Msa0467220 AT3G19760.1 32.500 400 245 8 133 531 26 401 7.41e-64 216
Msa0467220 AT4G16630.1 36.126 382 217 8 144 519 167 527 2.75e-61 218
Msa0467220 AT1G72730.1 32.918 401 246 6 133 532 30 408 3.35e-59 204
Msa0467220 AT1G51380.1 30.318 409 258 8 128 534 8 391 8.42e-59 202
Msa0467220 AT3G13920.1 33.333 390 237 6 144 532 39 406 1.06e-58 202
Msa0467220 AT1G54270.1 33.846 390 235 8 144 532 39 406 1.37e-58 202
Msa0467220 AT3G13920.3 33.333 390 237 6 144 532 29 396 3.39e-58 201
Msa0467220 AT3G13920.4 33.773 379 227 7 155 532 46 401 3.93e-58 201
Msa0467220 AT1G54270.2 34.301 379 225 9 155 532 46 401 4.40e-58 201
Msa0467220 AT1G77030.1 34.711 363 218 5 146 507 30 374 5.97e-58 209
Msa0467220 AT3G13920.2 34.048 373 223 6 144 515 39 389 5.88e-57 198
Msa0467220 AT3G13920.5 34.048 373 223 6 144 515 43 393 7.89e-57 197
Msa0467220 AT4G09730.1 31.690 426 255 11 143 549 111 519 2.97e-54 195
Msa0467220 AT4G00660.1 30.256 390 246 7 144 531 131 496 5.52e-54 192
Msa0467220 AT4G00660.2 30.256 390 246 7 144 531 131 496 5.52e-54 192
Msa0467220 AT5G11170.1 35.372 376 210 12 167 534 69 419 8.13e-53 187
Msa0467220 AT5G11200.1 35.372 376 210 12 167 534 69 419 8.13e-53 187
Msa0467220 AT5G05450.1 35.427 398 207 17 133 508 13 382 3.36e-52 189
Msa0467220 AT2G45810.1 30.303 396 247 10 144 536 154 523 2.03e-51 186
Msa0467220 AT1G71370.1 35.340 382 214 12 146 513 16 378 3.29e-51 186
Msa0467220 AT3G61240.2 30.184 381 240 8 144 522 124 480 8.12e-51 183
Msa0467220 AT3G61240.1 30.184 381 240 8 144 522 124 480 8.12e-51 183
Msa0467220 AT5G62190.1 34.097 349 220 5 169 517 121 459 1.20e-48 181
Msa0467220 AT5G11170.2 35.278 360 200 12 183 534 2 336 3.29e-48 172
Msa0467220 AT5G11200.3 32.933 416 207 14 167 534 69 460 1.04e-47 174
Msa0467220 AT5G65900.1 33.696 368 217 10 144 504 154 501 2.04e-47 176
Msa0467220 AT5G11200.2 32.019 431 203 14 167 531 69 475 2.46e-47 173
Msa0467220 AT5G08610.1 34.711 363 219 8 168 522 406 758 2.93e-47 178
Msa0467220 AT5G63630.1 34.043 376 222 10 159 522 69 430 1.44e-45 169
Msa0467220 AT5G63630.2 34.043 376 222 10 159 522 263 624 2.31e-45 172
Msa0467220 AT5G08620.1 33.333 369 216 9 168 522 104 456 7.25e-45 168
Msa0467220 AT2G40700.1 27.928 444 244 11 145 520 31 466 8.35e-43 163
Msa0467220 AT1G63250.1 34.670 349 205 12 165 502 349 685 1.98e-42 164
Msa0467220 AT2G07750.1 34.670 349 205 13 165 502 396 732 7.44e-42 162
Msa0467220 AT3G18600.1 30.548 383 238 8 145 520 90 451 3.51e-41 157
Msa0467220 AT5G54910.1 31.401 414 242 15 143 539 70 458 8.62e-40 155
Msa0467220 AT3G16840.2 28.571 434 224 13 155 519 202 618 6.69e-39 153
Msa0467220 AT3G16840.1 28.571 434 224 13 155 519 201 617 7.87e-39 153
Msa0467220 AT3G06980.1 29.175 473 268 17 76 519 326 760 1.01e-37 149
Msa0467220 AT3G53110.1 26.464 461 279 13 112 543 59 488 2.12e-37 145
Msa0467220 AT1G12770.2 27.316 421 255 8 144 520 110 523 4.17e-37 145
Msa0467220 AT1G12770.1 27.316 421 255 8 144 520 110 523 4.17e-37 145
Msa0467220 AT1G71280.2 32.840 338 170 13 146 471 17 309 2.88e-35 136
Msa0467220 AT1G71280.1 32.362 343 175 13 146 476 17 314 5.04e-35 138
Msa0467220 AT5G19210.2 29.121 364 203 13 164 497 96 434 2.32e-29 122
Msa0467220 AT4G15850.1 26.914 405 216 14 182 526 73 457 1.34e-28 120
Msa0467220 AT4G34910.1 27.136 398 234 10 144 498 46 430 1.66e-28 121
Msa0467220 AT1G51380.2 30.213 235 147 5 128 362 8 225 7.15e-28 114
Msa0467220 AT1G51380.4 30.568 229 142 5 128 356 8 219 2.94e-27 112
Msa0467220 AT1G51380.3 30.568 229 142 5 128 356 8 219 5.30e-27 112
Msa0467220 AT1G28180.2 45.299 117 61 1 174 290 3 116 5.78e-23 94.7
Msa0467220 AT5G19210.1 28.049 246 139 9 276 497 46 277 8.61e-17 82.0
Msa0467220 AT5G19210.3 28.049 246 139 9 276 497 46 277 8.61e-17 82.0
Msa0467220 AT1G59990.1 32.203 118 79 1 407 524 427 543 3.95e-14 75.9
Msa0467220 AT1G59990.2 32.203 118 79 1 407 524 427 543 4.02e-14 75.9
Msa0467220 AT1G27880.1 24.167 360 230 11 171 519 274 601 4.49e-12 69.7
Msa0467220 AT1G27880.2 24.167 360 230 11 171 519 274 601 8.78e-12 68.9

Find 247 sgRNAs with CRISPR-Local

Find 442 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAAGAAACGCCTTCAATTT+TGG 0.107084 3_3:-68442500 None:intergenic
GTCATAATTCCACTGATTAT+TGG 0.169636 3_3:-68443354 None:intergenic
AAACCAACCTGCTGGTTTAT+TGG 0.188033 3_3:-68443650 None:intergenic
GGTGGTCGTGGTGGTGGTTA+TGG 0.195984 3_3:+68442991 Msa0467220:CDS
GGAAATAGCGGTGGTGGATA+TGG 0.224387 3_3:+68447545 Msa0467220:CDS
GGTGGGTATGGTGGAGGATA+TGG 0.226026 3_3:+68447575 Msa0467220:CDS
TATATACTGTCTTAGGTATT+AGG 0.238341 3_3:+68447674 Msa0467220:three_prime_UTR
AAACAAACCTGTATCTCTTT+TGG 0.239901 3_3:-68444458 None:intergenic
GGTGCTGCTGGTGCAGGTGC+TGG 0.248580 3_3:-68442904 None:intergenic
ATAGCATTATATACTGTCTT+AGG 0.248960 3_3:+68447667 Msa0467220:three_prime_UTR
CCTTGCTGGAAGGGATTTGA+TGG 0.252328 3_3:+68443287 Msa0467220:CDS
CAAGCCAACATCATTACTTA+TGG 0.276012 3_3:+68447793 Msa0467220:three_prime_UTR
AACAAATCAACCAGCCTTCC+TGG 0.280880 3_3:-68444272 None:intergenic
GCTTGTGCGCAGACGGGTTC+AGG 0.311912 3_3:+68443309 Msa0467220:CDS
TCCTGCTCCTCTTGAGTAAC+AGG 0.324089 3_3:-68443084 None:intergenic
GTGGTCGTGGTGGTGGTTAT+GGG 0.326186 3_3:+68442992 Msa0467220:CDS
CACATCAGTAGCAACCAATA+TGG 0.326327 3_3:-68447180 None:intergenic
TTCCCAGCAACTACTATTCA+TGG 0.328013 3_3:+68445827 Msa0467220:CDS
GGCTGATAGGATGCTGGATA+TGG 0.328852 3_3:+68444346 Msa0467220:CDS
GGATATGGTGGTGGGTATGC+TGG 0.331530 3_3:+68447590 Msa0467220:CDS
TTCGCTGCACGTTCATCCTT+TGG 0.338007 3_3:+68447422 Msa0467220:CDS
CTTGAACGTACTCAACTCTT+TGG 0.345926 3_3:-68445037 None:intergenic
GCGATCTTCATGGGCTGATT+TGG 0.346074 3_3:+68442756 Msa0467220:CDS
CTCTTGCTGGATGCTTGTAT+TGG 0.346478 3_3:+68448152 Msa0467220:three_prime_UTR
AGGAAGGCTGGTTGATTTGT+TGG 0.354413 3_3:+68444274 Msa0467220:CDS
GAGTTTCACTGTCGATGATT+AGG 0.356718 3_3:+68444306 Msa0467220:CDS
GCAATTCCGATTTCCCTTGC+TGG 0.358836 3_3:+68443273 Msa0467220:CDS
GGGTATGGTGGAGGATATGG+TGG 0.365974 3_3:+68447578 Msa0467220:CDS
AACTCTTTGGTCAATTAAAT+CGG 0.368348 3_3:-68445024 None:intergenic
TTTCATACCAGACAGGGGTT+AGG 0.368632 3_3:+68443603 Msa0467220:CDS
CGTTCAGGAGGAGGCCGATT+TGG 0.370232 3_3:+68447461 Msa0467220:CDS
AGGCGCTTAATCAGAATATT+AGG 0.371626 3_3:+68443211 Msa0467220:CDS
TACATAATCATCAATGTCAT+TGG 0.372997 3_3:-68447258 None:intergenic
GGAGGAAAGAACCGCCGTTC+AGG 0.374297 3_3:+68447446 Msa0467220:CDS
TGATGCTTACGAGGATATTC+CGG 0.374320 3_3:+68443125 Msa0467220:CDS
TGGCGGTGTTGGTGCATTCT+CGG 0.377078 3_3:-68442794 None:intergenic
AGCTTTGACTTTAGTCTTTG+TGG 0.377942 3_3:+68445754 Msa0467220:CDS
GAAATAGCGGTGGTGGATAT+GGG 0.378936 3_3:+68447546 Msa0467220:CDS
TAATGAAAACAACACATCTA+TGG 0.379843 3_3:+68447337 Msa0467220:CDS
GGGGCTTCTGGTGGGTATGG+TGG 0.380906 3_3:+68447566 Msa0467220:CDS
GCTGGAAATAGCGCCGGTCC+TGG 0.381422 3_3:+68447608 Msa0467220:CDS
GGTGGATATGGGGCTTCTGG+TGG 0.388095 3_3:+68447557 Msa0467220:CDS
ATCTATTCTACCTCAGGCTC+AGG 0.389503 3_3:-68442457 None:intergenic
CATCCTATCAGCCTCATCTA+AGG 0.391228 3_3:-68444336 None:intergenic
CTGGAAATAGCGCCGGTCCT+GGG 0.392227 3_3:+68447609 Msa0467220:CDS
TTGATACTATGCGATCTTCA+TGG 0.393903 3_3:+68442746 Msa0467220:exon
GGTGGTGGATATGGGGCTTC+TGG 0.394612 3_3:+68447554 Msa0467220:CDS
AGCAAATCCATTTGCAGATC+AGG 0.397080 3_3:+68443047 Msa0467220:CDS
TCCCTTCCAGCAAGGGAAAT+CGG 0.397386 3_3:-68443279 None:intergenic
GTTAGGGTGGTTGTTGCTTA+CGG 0.398532 3_3:+68443620 Msa0467220:CDS
TAGAAAGATTGTTGAACAAA+TGG 0.399399 3_3:+68444385 Msa0467220:CDS
TATGGGGCTTCTGGTGGGTA+TGG 0.399921 3_3:+68447563 Msa0467220:CDS
GGAATTGCATGCCGCTGAAC+AGG 0.401326 3_3:-68443258 None:intergenic
GGTGCAGGTGCTGGTGCTGA+AGG 0.405023 3_3:-68442895 None:intergenic
GATGATTATGTACACCGTAT+TGG 0.405202 3_3:+68447269 Msa0467220:CDS
CTGCACAGAGGCCGCCTCGT+GGG 0.405380 3_3:+68443385 Msa0467220:CDS
CGATAACTCCGGATCGCGTT+GGG 0.405949 3_3:+68442933 Msa0467220:CDS
TATGGTGGAGGATATGGTGG+TGG 0.407720 3_3:+68447581 Msa0467220:CDS
ACATCAGTAGCAACCAATAT+GGG 0.412266 3_3:-68447179 None:intergenic
GCTTCTGGTGGGTATGGTGG+AGG 0.413902 3_3:+68447569 Msa0467220:CDS
GGAACAGAGGTGGTGGTGGT+TGG 0.417185 3_3:+68443013 Msa0467220:CDS
CTCTTGTTCTCTCGCCAACT+AGG 0.419822 3_3:+68443430 Msa0467220:CDS
GGTGGTGGTGGTCGTGGTGG+TGG 0.423551 3_3:+68442985 Msa0467220:CDS
CCACGAGGCGGCCTCTGTGC+AGG 0.425187 3_3:-68443384 None:intergenic
AGATGAGGAGGAACGTAAAC+AGG 0.426503 3_3:-68442859 None:intergenic
TTCATACCAGACAGGGGTTA+GGG 0.430328 3_3:+68443604 Msa0467220:CDS
TGTTGCAACTCCAGGAAGGC+TGG 0.431189 3_3:+68444262 Msa0467220:CDS
ATGGTGATTACTAACATATT+AGG 0.431590 3_3:+68447908 Msa0467220:three_prime_UTR
CAAGAGGAGCAGGAGAATAC+AGG 0.433370 3_3:+68443093 Msa0467220:CDS
AAAGCAGGTGCTGCTGGTGC+AGG 0.438000 3_3:-68442910 None:intergenic
TTGCTCTTTGTGCATGAAGA+AGG 0.438217 3_3:-68445088 None:intergenic
GCAGCAGAAGGTGGCGGTGT+TGG 0.438885 3_3:-68442805 None:intergenic
TATGGGAACAGAGGTGGTGG+TGG 0.439069 3_3:+68443009 Msa0467220:CDS
GAACAGAGGTGGTGGTGGTT+GGG 0.439117 3_3:+68443014 Msa0467220:CDS
TCACCATGAATAGTAGTTGC+TGG 0.448574 3_3:-68445830 None:intergenic
TAGCCTTAGATGAGGCTGAT+AGG 0.448823 3_3:+68444333 Msa0467220:CDS
CTCTCCCTGTCCTTCCAATA+CGG 0.450963 3_3:-68447283 None:intergenic
TTTCTGGCTGTTGGAAGAGT+GGG 0.454670 3_3:+68444993 Msa0467220:CDS
GCCTGTTACTCAAGAGGAGC+AGG 0.456084 3_3:+68443083 Msa0467220:CDS
TCCGATTTCCCTTGCTGGAA+GGG 0.456489 3_3:+68443278 Msa0467220:CDS
GAAAGTCACGGCCACCAAAT+CGG 0.458285 3_3:-68447475 None:intergenic
TTTAACATTTCCTACATGGA+TGG 0.459298 3_3:+68448084 Msa0467220:three_prime_UTR
TTTGATGGCTTGTGCGCAGA+CGG 0.462192 3_3:+68443302 Msa0467220:CDS
GTGGATATGGGGCTTCTGGT+GGG 0.464539 3_3:+68447558 Msa0467220:CDS
AACGATTACCGCGGTGGTGG+TGG 0.465638 3_3:+68442970 Msa0467220:CDS
GACATTCTTGTTGCAACTCC+AGG 0.467487 3_3:+68444254 Msa0467220:CDS
CGGAGGTGCCCAACGCGATC+CGG 0.468791 3_3:-68442941 None:intergenic
AACTTCAAATAAAGAGAGAA+AGG 0.469032 3_3:-68447737 None:intergenic
CAACCACCCTAACCCCTGTC+TGG 0.470522 3_3:-68443610 None:intergenic
ATAGTTTGTCTGACACCTGC+TGG 0.470533 3_3:-68444416 None:intergenic
TCCTGGGGTGACCAGTGCAT+GGG 0.473646 3_3:+68447625 Msa0467220:CDS
GTCCTGGGGTGACCAGTGCA+TGG 0.473952 3_3:+68447624 Msa0467220:CDS
GAATCATCCTGATCTGCAAA+TGG 0.473989 3_3:-68443054 None:intergenic
TGATACTATGCGATCTTCAT+GGG 0.476741 3_3:+68442747 Msa0467220:exon
TGCACAGAGGCCGCCTCGTG+GGG 0.477031 3_3:+68443386 Msa0467220:CDS
GGTTATGGGAACAGAGGTGG+TGG 0.477100 3_3:+68443006 Msa0467220:CDS
CAAAGAGCAAATGGCGTACA+AGG 0.477788 3_3:+68445101 Msa0467220:CDS
AGAAGTTGTGTAGTGTTAGC+AGG 0.478789 3_3:+68447877 Msa0467220:three_prime_UTR
TCGATAACTCCGGATCGCGT+TGG 0.484000 3_3:+68442932 Msa0467220:CDS
GATTACCGCGGTGGTGGTGG+TGG 0.484866 3_3:+68442973 Msa0467220:CDS
AGTCTTTGTGGAGACAAAGA+AGG 0.485926 3_3:+68445766 Msa0467220:CDS
TCATGGTGACAGGTCACAAC+AGG 0.489281 3_3:+68445844 Msa0467220:CDS
TTATCGAAAGCAGGTGCTGC+TGG 0.490130 3_3:-68442916 None:intergenic
CTTCATGCACAAAGAGCAAA+TGG 0.491515 3_3:+68445092 Msa0467220:CDS
TGCACTGGTCACCCCAGGAC+CGG 0.491777 3_3:-68447621 None:intergenic
TCCATCCATCCCAAAATTGA+AGG 0.492933 3_3:+68442490 Msa0467220:five_prime_UTR
GAGCTGATGCGCTGGAACAC+TGG 0.498191 3_3:+68445789 Msa0467220:CDS
GAAGCAGCAGCAGAAGGTGG+CGG 0.500887 3_3:-68442811 None:intergenic
ATTTCCTACATGGATGGGTA+AGG 0.502508 3_3:+68448090 Msa0467220:three_prime_UTR
AACTAGGGAGCTATCGATGC+AGG 0.503242 3_3:+68443446 Msa0467220:CDS
ACAGGGAGAGCAGGAAAGAA+AGG 0.503939 3_3:+68447296 Msa0467220:CDS
ACATAATCATCAATGTCATT+GGG 0.504262 3_3:-68447257 None:intergenic
GGTGGTTATGGGAACAGAGG+TGG 0.507683 3_3:+68443003 Msa0467220:CDS
TCCCATGCACTGGTCACCCC+AGG 0.510105 3_3:-68447626 None:intergenic
AAAGAAGGGAGCTGATGCGC+TGG 0.510762 3_3:+68445781 Msa0467220:CDS
GCTGCACGTTCATCCTTTGG+TGG 0.511407 3_3:+68447425 Msa0467220:CDS
TCAGGAGGAGGCCGATTTGG+TGG 0.511851 3_3:+68447464 Msa0467220:CDS
AAGAACCGCCGTTCAGGAGG+AGG 0.511872 3_3:+68447452 Msa0467220:CDS
ATGTGGTGAGGGGTTGATTG+AGG 0.514168 3_3:+68447999 Msa0467220:three_prime_UTR
TCAACAATCTTTCTAATCTG+TGG 0.514562 3_3:-68444377 None:intergenic
AGATGTAGAATATGTGGTGA+GGG 0.515636 3_3:+68447988 Msa0467220:three_prime_UTR
TTAACATTTCCTACATGGAT+GGG 0.516854 3_3:+68448085 Msa0467220:three_prime_UTR
GTACACCGTATTGGAAGGAC+AGG 0.521546 3_3:+68447278 Msa0467220:CDS
GCGAACCGCGAGAGCCAAGC+AGG 0.522473 3_3:-68447404 None:intergenic
GCAAAAGTATTCACCGGTGG+AGG 0.524079 3_3:-68443171 None:intergenic
TGTTGGTGCATTCTCGGCCG+CGG 0.525546 3_3:-68442788 None:intergenic
TGACAAGAGAAGCCATCTCA+TGG 0.529627 3_3:+68445064 Msa0467220:CDS
CCACCGCGGTAATCGTTCCT+AGG 0.530683 3_3:-68442964 None:intergenic
TTCCGATTTCCCTTGCTGGA+AGG 0.531502 3_3:+68443277 Msa0467220:CDS
TGCTGAGATTGATTTGGGCG+AGG 0.533864 3_3:+68443191 Msa0467220:CDS
CGCGTTGGGCACCTCCGCCT+AGG 0.535532 3_3:+68442947 Msa0467220:CDS
GGCCGTGACTTTCGAAGAGA+AGG 0.536463 3_3:+68447485 Msa0467220:CDS
TCTTGTTCTCTCGCCAACTA+GGG 0.537140 3_3:+68443431 Msa0467220:CDS
ATACACACCCACATGTCCCT+TGG 0.537196 3_3:-68447832 None:intergenic
CCTGCACAGAGGCCGCCTCG+TGG 0.537603 3_3:+68443384 Msa0467220:CDS
GCACGTTCATCCTTTGGTGG+AGG 0.538128 3_3:+68447428 Msa0467220:CDS
AGGAACGATTACCGCGGTGG+TGG 0.538214 3_3:+68442967 Msa0467220:CDS
GGTTCTGATTACCATGGTGC+AGG 0.539362 3_3:+68447524 Msa0467220:CDS
CACCATGAATAGTAGTTGCT+GGG 0.539374 3_3:-68445829 None:intergenic
CGGTAATCGTTCCTAGGCGG+AGG 0.539400 3_3:-68442958 None:intergenic
GGTGCAGGAAATAGCGGTGG+TGG 0.542275 3_3:+68447539 Msa0467220:CDS
ATTGGAAGGACAGGGAGAGC+AGG 0.544432 3_3:+68447287 Msa0467220:CDS
TGTGTAGTGTTAGCAGGTGT+TGG 0.549428 3_3:+68447883 Msa0467220:three_prime_UTR
TGCATCGATAGCTCCCTAGT+TGG 0.549761 3_3:-68443444 None:intergenic
AGCAAATGGCGTACAAGGAA+AGG 0.550127 3_3:+68445106 Msa0467220:CDS
GCTGATAGGATGCTGGATAT+GGG 0.550426 3_3:+68444347 Msa0467220:CDS
TTGATGGCTTGTGCGCAGAC+GGG 0.550920 3_3:+68443303 Msa0467220:CDS
GAAATAACCACCGAAAATGT+TGG 0.551907 3_3:-68447958 None:intergenic
TAAACCATAAGTAATGATGT+TGG 0.554379 3_3:-68447797 None:intergenic
CAAATGGACATGCCTCCAGC+AGG 0.555699 3_3:+68444401 Msa0467220:CDS
GCATTAAGATCATTTAAAAG+TGG 0.555949 3_3:+68447149 Msa0467220:CDS
GAAGGCGCACCCTGAGCCTG+AGG 0.556445 3_3:+68442447 Msa0467220:five_prime_UTR
CATCAAATCCCTTCCAGCAA+GGG 0.556584 3_3:-68443286 None:intergenic
AAGTACCTGCTTGGCTCTCG+CGG 0.562257 3_3:+68447399 Msa0467220:CDS
AATAATCAGTGGAATTATGA+CGG 0.562685 3_3:+68443356 Msa0467220:CDS
CAACTACTATTCATGGTGAC+AGG 0.562813 3_3:+68445834 Msa0467220:CDS
AACAAGAGCAAGCGGACACA+CGG 0.562965 3_3:-68443415 None:intergenic
GCTAATCGCCAAGGGACATG+TGG 0.563601 3_3:+68447824 Msa0467220:three_prime_UTR
ACTTCAAATAAAGAGAGAAA+GGG 0.564240 3_3:-68447736 None:intergenic
ATAATCAGTGGAATTATGAC+GGG 0.564273 3_3:+68443357 Msa0467220:CDS
GTGCTGGTGCTGAAGGTCCA+CGG 0.565006 3_3:-68442888 None:intergenic
AAAACCCTGAAAATGGAGAA+AGG 0.565240 3_3:-68442567 None:intergenic
TGGTGGAAATGTTCCTCCAC+CGG 0.566056 3_3:+68443158 Msa0467220:CDS
TTTCCACCACTCGTCTCCAC+CGG 0.568311 3_3:-68443144 None:intergenic
GGGACATGTGGGTGTGTATG+TGG 0.569476 3_3:+68447836 Msa0467220:three_prime_UTR
TGGAAATAGCGCCGGTCCTG+GGG 0.571169 3_3:+68447610 Msa0467220:CDS
TTCAGATACACGAAGAGGCT+AGG 0.571605 3_3:+68443576 Msa0467220:intron
AGATGAGGCTGATAGGATGC+TGG 0.571680 3_3:+68444340 Msa0467220:CDS
ATGGTGGAGGATATGGTGGT+GGG 0.572911 3_3:+68447582 Msa0467220:CDS
CAAATCAAGAAGTACCTGCT+TGG 0.574468 3_3:+68447390 Msa0467220:CDS
GGGAGAAGATGTAGAATATG+TGG 0.575502 3_3:+68447982 Msa0467220:three_prime_UTR
AACGTAAACAGGTCGAGTGT+TGG 0.575532 3_3:-68442848 None:intergenic
CCATCAAATCCCTTCCAGCA+AGG 0.576291 3_3:-68443287 None:intergenic
GCATGCCGCTGAACAGGTGT+CGG 0.577393 3_3:-68443252 None:intergenic
GCGGTTCTTTCCTCCACCAA+AGG 0.578855 3_3:-68447438 None:intergenic
TTTACGTTCCTCCTCATCTG+AGG 0.579339 3_3:+68442863 Msa0467220:CDS
ATCTCAGCAAAAGTATTCAC+CGG 0.579776 3_3:-68443177 None:intergenic
CATATTGGTTGCTACTGATG+TGG 0.580918 3_3:+68447181 Msa0467220:CDS
GTCTTTGTGGAGACAAAGAA+GGG 0.581107 3_3:+68445767 Msa0467220:CDS
TGGTGCTCCAATAAACCAGC+AGG 0.584862 3_3:+68443643 Msa0467220:CDS
TTAACAGAAGCAGCAGCAGA+AGG 0.586556 3_3:-68442817 None:intergenic
AATCATCGACAGTGAAACTC+TGG 0.587863 3_3:-68444303 None:intergenic
ATTATGTACACCGTATTGGA+AGG 0.588871 3_3:+68447273 Msa0467220:CDS
GATCCGGAGTTATCGAAAGC+AGG 0.589393 3_3:-68442925 None:intergenic
TGCAGATCAGGATGATTCTG+AGG 0.590279 3_3:+68443059 Msa0467220:CDS
AAGAGGAGCAGGAGAATACA+GGG 0.591173 3_3:+68443094 Msa0467220:CDS
GGCGAGAGAACAAGAGCAAG+CGG 0.592909 3_3:-68443423 None:intergenic
AACCTTCTCTTCGAAAGTCA+CGG 0.593383 3_3:-68447487 None:intergenic
TGATTTGGCTGCAAATTCCG+CGG 0.593942 3_3:+68442771 Msa0467220:CDS
CATCAGTAGCAACCAATATG+GGG 0.596151 3_3:-68447178 None:intergenic
GCAATGCCTGCAGGAAAGAG+AGG 0.597727 3_3:+68447124 Msa0467220:intron
GGGTATGCTGGAAATAGCGC+CGG 0.598506 3_3:+68447602 Msa0467220:CDS
GTTTACAACGCTAATCGCCA+AGG 0.598686 3_3:+68447815 Msa0467220:three_prime_UTR
GGAAAGAACCGCCGTTCAGG+AGG 0.601920 3_3:+68447449 Msa0467220:CDS
AAATAGCGGTGGTGGATATG+GGG 0.603867 3_3:+68447547 Msa0467220:CDS
GAAAATGGAGAAAGGAAGAG+AGG 0.605827 3_3:-68442559 None:intergenic
TGAGGAGCCTGTTACTCAAG+AGG 0.606228 3_3:+68443077 Msa0467220:CDS
ACAGAAGCAGCAGCAGAAGG+TGG 0.609445 3_3:-68442814 None:intergenic
CAGCTACGAGAGCTTGAGAG+AGG 0.609572 3_3:+68444227 Msa0467220:intron
GCTACTGATGTGGCTGCACG+TGG 0.610943 3_3:+68447191 Msa0467220:CDS
GTGTTAGCAGGTGTTGGCAA+TGG 0.611267 3_3:+68447889 Msa0467220:three_prime_UTR
TTTGTTTCAGATACACGAAG+AGG 0.612799 3_3:+68443571 Msa0467220:intron
AGGGTGGTTGTTGCTTACGG+TGG 0.614559 3_3:+68443623 Msa0467220:CDS
GCACCTGCTTTCGATAACTC+CGG 0.616286 3_3:+68442922 Msa0467220:CDS
CTACACAACTTCTATTCGAG+TGG 0.623210 3_3:-68447867 None:intergenic
AAAACCTTACCCATCCATGT+AGG 0.623257 3_3:-68448094 None:intergenic
ATCGGCCTCCTCCTGAACGG+CGG 0.623410 3_3:-68447457 None:intergenic
TACCATGGTGCAGGAAATAG+CGG 0.626118 3_3:+68447533 Msa0467220:CDS
ATTCCGGTGGAGACGAGTGG+TGG 0.627247 3_3:+68443141 Msa0467220:CDS
AAGATGTAGAATATGTGGTG+AGG 0.627675 3_3:+68447987 Msa0467220:three_prime_UTR
TTCTTGTTGCAACTCCAGGA+AGG 0.627799 3_3:+68444258 Msa0467220:CDS
ACGAGAGCTTGAGAGAGGAG+TGG 0.631044 3_3:+68444232 Msa0467220:CDS
CCACGGTTCCTCAGATGAGG+AGG 0.633176 3_3:-68442871 None:intergenic
ATAATTTGAAAGGAAATCAG+AGG 0.635272 3_3:-68444967 None:intergenic
GATGTTGGCTTGAAAACACT+AGG 0.636987 3_3:-68447782 None:intergenic
TCTATTCTACCTCAGGCTCA+GGG 0.637543 3_3:-68442456 None:intergenic
CCTCCTCATCTGAGGAACCG+TGG 0.637971 3_3:+68442871 Msa0467220:CDS
GATAAACTTTGATGCTTACG+AGG 0.638411 3_3:+68443116 Msa0467220:CDS
TGCTTACGAGGATATTCCGG+TGG 0.638728 3_3:+68443128 Msa0467220:CDS
GGTCCACGGTTCCTCAGATG+AGG 0.639824 3_3:-68442874 None:intergenic
CACCGCTATTTCCTGCACCA+TGG 0.641692 3_3:-68447535 None:intergenic
ATACCAGACAGGGGTTAGGG+TGG 0.642202 3_3:+68443607 Msa0467220:CDS
CCTAGGAACGATTACCGCGG+TGG 0.645514 3_3:+68442964 Msa0467220:CDS
AAATAAAATAGAGAAAGAGA+AGG 0.647498 3_3:+68442429 None:intergenic
CAAATCGGCCTCCTCCTGAA+CGG 0.654518 3_3:-68447460 None:intergenic
CATGAAGAAGGTCCATGAGA+TGG 0.654546 3_3:-68445076 None:intergenic
TTGGCTTGAAAACACTAGGA+GGG 0.660677 3_3:-68447778 None:intergenic
GTTTGTCTGACACCTGCTGG+AGG 0.661568 3_3:-68444413 None:intergenic
TGAAGCCGACACCTGTTCAG+CGG 0.662139 3_3:+68443247 Msa0467220:CDS
GATATTCCGGTGGAGACGAG+TGG 0.668865 3_3:+68443138 Msa0467220:CDS
AGGGGTGGTTCTGATTACCA+TGG 0.669156 3_3:+68447518 Msa0467220:CDS
GTTGGCTTGAAAACACTAGG+AGG 0.671168 3_3:-68447779 None:intergenic
CTAATCGCCAAGGGACATGT+GGG 0.673532 3_3:+68447825 Msa0467220:three_prime_UTR
TTAACTACATGTGCAACATG+TGG 0.673678 3_3:-68447224 None:intergenic
TTTACAACGCTAATCGCCAA+GGG 0.677411 3_3:+68447816 Msa0467220:three_prime_UTR
CATGGTGCAGGAAATAGCGG+TGG 0.677728 3_3:+68447536 Msa0467220:CDS
ACGGTACGCACCCCACGAGG+CGG 0.682057 3_3:-68443396 None:intergenic
GATGTAGAATATGTGGTGAG+GGG 0.683102 3_3:+68447989 Msa0467220:three_prime_UTR
ATCAGTAGCAACCAATATGG+GGG 0.683355 3_3:-68447177 None:intergenic
TAGGTATCTAGCCTTAGATG+AGG 0.687328 3_3:+68444325 Msa0467220:CDS
CACACGGTACGCACCCCACG+AGG 0.696620 3_3:-68443399 None:intergenic
TCAGCAAAAGTATTCACCGG+TGG 0.697347 3_3:-68443174 None:intergenic
GGTGGTGGTTATGGGAACAG+AGG 0.710981 3_3:+68443000 Msa0467220:CDS
CCGCGGTAATCGTTCCTAGG+CGG 0.719043 3_3:-68442961 None:intergenic
TGACGGGACAGCCTGCACAG+AGG 0.753358 3_3:+68443373 Msa0467220:CDS
TACACCGTATTGGAAGGACA+GGG 0.770780 3_3:+68447279 Msa0467220:CDS
CCGCCTAGGAACGATTACCG+CGG 0.778227 3_3:+68442961 Msa0467220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTGTTTTAAAAATTGTT+TGG + chr3_3:68446703-68446722 Msa0467220:intron 10.0%
!!! ATGATATTCATTTTAATTTG+TGG + chr3_3:68443498-68443517 Msa0467220:intron 15.0%
!! ATACGCAAAAAATTAAAAAT+GGG - chr3_3:68443680-68443699 None:intergenic 15.0%
!! TATACGCAAAAAATTAAAAA+TGG - chr3_3:68443681-68443700 None:intergenic 15.0%
!!! TTTGTATTCAAATTTTTGTA+AGG - chr3_3:68443983-68444002 None:intergenic 15.0%
!! ATTCAAAAGTAAAATATGAT+TGG - chr3_3:68444154-68444173 None:intergenic 15.0%
!!! AAAATATAAATGTTTTGTAC+TGG - chr3_3:68444178-68444197 None:intergenic 15.0%
!!! TGTTTTTTTATTATGTGAAA+AGG + chr3_3:68444476-68444495 Msa0467220:intron 15.0%
!! AAAAAAAACGAATATAACAA+TGG - chr3_3:68445211-68445230 None:intergenic 15.0%
!!! CTTTTTTCTTTTATAAAATG+TGG + chr3_3:68445290-68445309 Msa0467220:intron 15.0%
!!! ATATTTGTATTGGTATTTTA+GGG + chr3_3:68445491-68445510 Msa0467220:intron 15.0%
!! AGGAAAAATTTAAGAATATA+TGG + chr3_3:68446126-68446145 Msa0467220:intron 15.0%
!! GGAAAAATTTAAGAATATAT+GGG + chr3_3:68446127-68446146 Msa0467220:intron 15.0%
!!! GTAAAATTAACACAAATTTT+AGG + chr3_3:68446400-68446419 Msa0467220:intron 15.0%
!! ATTCCATTATTTAAATTCTT+AGG + chr3_3:68446648-68446667 Msa0467220:intron 15.0%
!!! TAACATTTTTTACAATTTCT+CGG - chr3_3:68446796-68446815 None:intergenic 15.0%
!! ATTATAAATCAAAAGCAATA+TGG - chr3_3:68447046-68447065 None:intergenic 15.0%
!! AAATGTTTGAATTCGATTTA+TGG + chr3_3:68442712-68442731 Msa0467220:intron 20.0%
!! TTTATCAAAAGTGATTATTC+AGG + chr3_3:68443722-68443741 Msa0467220:intron 20.0%
!! TTTGGTGAAATAATTCAATT+TGG + chr3_3:68444098-68444117 Msa0467220:intron 20.0%
!! CCAGAAAAATATAATTTGAA+AGG - chr3_3:68444980-68444999 None:intergenic 20.0%
!!! CCTTTCAAATTATATTTTTC+TGG + chr3_3:68444977-68444996 Msa0467220:CDS 20.0%
!!! TTAAAATCATTTAAGTTTGC+TGG - chr3_3:68445332-68445351 None:intergenic 20.0%
!! AAATCTGTATAAATTCAATC+TGG + chr3_3:68445379-68445398 Msa0467220:intron 20.0%
!!! CATATTTGTATTGGTATTTT+AGG + chr3_3:68445490-68445509 Msa0467220:intron 20.0%
!! TGTTATAAAGACAAAGATAA+AGG - chr3_3:68445883-68445902 None:intergenic 20.0%
!! AAAGAAAATTGAGAAAACAT+GGG - chr3_3:68445959-68445978 None:intergenic 20.0%
!! AAAAGAAAATTGAGAAAACA+TGG - chr3_3:68445960-68445979 None:intergenic 20.0%
!!! TAAATTTTTCCTAATACAGT+AGG - chr3_3:68446118-68446137 None:intergenic 20.0%
!!! TTGTAAATTGAACACTTTTT+AGG - chr3_3:68446501-68446520 None:intergenic 20.0%
!!! TTTAAATAATGGAATGCAAA+TGG - chr3_3:68446643-68446662 None:intergenic 20.0%
!! GTTCCTAAGAATTTAAATAA+TGG - chr3_3:68446654-68446673 None:intergenic 20.0%
!!! AACATTTTTTACAATTTCTC+GGG - chr3_3:68446795-68446814 None:intergenic 20.0%
!! ACATAGGTAATTTAGTTATT+AGG + chr3_3:68446916-68446935 Msa0467220:intron 20.0%
!!! TTATTTTTGAGAGCATTTTT+AGG + chr3_3:68447068-68447087 Msa0467220:intron 20.0%
!!! TATTTTTGAGAGCATTTTTA+GGG + chr3_3:68447069-68447088 Msa0467220:intron 20.0%
!! AAAAAATAAATCTATAGGTG+TGG - chr3_3:68447714-68447733 None:intergenic 20.0%
! AAAAATATCTATTCTACCTC+AGG - chr3_3:68442466-68442485 None:intergenic 25.0%
! AAAAAGTAAAACCCTGAAAA+TGG - chr3_3:68442577-68442596 None:intergenic 25.0%
!!! TTACTTTTTCATTTCAACAC+AGG + chr3_3:68442588-68442607 Msa0467220:five_prime_UTR 25.0%
!!! TTTTGTTTTCCAATAATCAG+TGG + chr3_3:68443345-68443364 Msa0467220:CDS 25.0%
! AATAATCAGTGGAATTATGA+CGG + chr3_3:68443356-68443375 Msa0467220:CDS 25.0%
!!! TTGTTGATTTCGTTCTTATT+TGG + chr3_3:68444080-68444099 Msa0467220:intron 25.0%
! TAGAAAGATTGTTGAACAAA+TGG + chr3_3:68444385-68444404 Msa0467220:CDS 25.0%
! ATTACACACACATATATGAA+AGG - chr3_3:68444517-68444536 None:intergenic 25.0%
! GATTTCAAACAACATTCAAT+AGG - chr3_3:68444700-68444719 None:intergenic 25.0%
!! TTTCTAAGAATTAAGATGGA+AGG - chr3_3:68444785-68444804 None:intergenic 25.0%
! TTCCATCTTAATTCTTAGAA+AGG + chr3_3:68444784-68444803 Msa0467220:intron 25.0%
!! AACCTTTCTAAGAATTAAGA+TGG - chr3_3:68444789-68444808 None:intergenic 25.0%
! ATAATTTGAAAGGAAATCAG+AGG - chr3_3:68444970-68444989 None:intergenic 25.0%
!!! AATTATATTTTTCTGGCTGT+TGG + chr3_3:68444984-68445003 Msa0467220:CDS 25.0%
! AACTCTTTGGTCAATTAAAT+CGG - chr3_3:68445027-68445046 None:intergenic 25.0%
! AAACGAATATAACAATGGAA+AGG - chr3_3:68445206-68445225 None:intergenic 25.0%
! TGTATAAATTCAATCTGGAT+GGG + chr3_3:68445384-68445403 Msa0467220:intron 25.0%
! AATTAAGACAACAGATTGTA+TGG - chr3_3:68445521-68445540 None:intergenic 25.0%
! TCAAAAACCTTAAACTTACA+TGG - chr3_3:68445915-68445934 None:intergenic 25.0%
! AATGTATTCACAAAGTAAAC+AGG - chr3_3:68446194-68446213 None:intergenic 25.0%
! GTAAAACTAACACAAAATTC+AGG - chr3_3:68446231-68446250 None:intergenic 25.0%
!!! GTACAATTGTTCACATTTTT+TGG + chr3_3:68446283-68446302 Msa0467220:intron 25.0%
!!! AACAATTGTGTGCATTTTTT+TGG - chr3_3:68446347-68446366 None:intergenic 25.0%
! AATAATGTTCTCACAGTAAT+TGG + chr3_3:68446430-68446449 Msa0467220:intron 25.0%
! ATAATGTTCTCACAGTAATT+GGG + chr3_3:68446431-68446450 Msa0467220:intron 25.0%
! TTATGTGAAACTTATGCTTT+AGG - chr3_3:68446527-68446546 None:intergenic 25.0%
!!! TTCCTTTTTTAACAAGTGTT+TGG + chr3_3:68446755-68446774 Msa0467220:intron 25.0%
!! AACCAAACACTTGTTAAAAA+AGG - chr3_3:68446760-68446779 None:intergenic 25.0%
!!! ACATTTTTTACAATTTCTCG+GGG - chr3_3:68446794-68446813 None:intergenic 25.0%
!!! CTTTTTTTTAATGGCTTTCA+AGG - chr3_3:68446821-68446840 None:intergenic 25.0%
! TGAAAGCCATTAAAAAAAAG+TGG + chr3_3:68446821-68446840 Msa0467220:intron 25.0%
!!! CACAAACCACTTTTTTTTAA+TGG - chr3_3:68446830-68446849 None:intergenic 25.0%
! CAACTCTAATATGAATACAT+AGG + chr3_3:68446900-68446919 Msa0467220:intron 25.0%
! GCATTAAGATCATTTAAAAG+TGG + chr3_3:68447149-68447168 Msa0467220:CDS 25.0%
! ACATAATCATCAATGTCATT+GGG - chr3_3:68447260-68447279 None:intergenic 25.0%
! TACATAATCATCAATGTCAT+TGG - chr3_3:68447261-68447280 None:intergenic 25.0%
! TAATGAAAACAACACATCTA+TGG + chr3_3:68447337-68447356 Msa0467220:CDS 25.0%
! ATAGCATTATATACTGTCTT+AGG + chr3_3:68447667-68447686 Msa0467220:three_prime_UTR 25.0%
! TATATACTGTCTTAGGTATT+AGG + chr3_3:68447674-68447693 Msa0467220:three_prime_UTR 25.0%
! GGGAGAAAAAATAAATCTAT+AGG - chr3_3:68447719-68447738 None:intergenic 25.0%
! ACTTCAAATAAAGAGAGAAA+GGG - chr3_3:68447739-68447758 None:intergenic 25.0%
! AACTTCAAATAAAGAGAGAA+AGG - chr3_3:68447740-68447759 None:intergenic 25.0%
! TAAACCATAAGTAATGATGT+TGG - chr3_3:68447800-68447819 None:intergenic 25.0%
! ATGGTGATTACTAACATATT+AGG + chr3_3:68447908-68447927 Msa0467220:three_prime_UTR 25.0%
!!! TCATTTTAACATTTCCTACA+TGG + chr3_3:68448080-68448099 Msa0467220:three_prime_UTR 25.0%
!!! TAAGGTTTTGTAATAGTTAG+TGG + chr3_3:68448108-68448127 Msa0467220:three_prime_UTR 25.0%
! AAAGAAACGCCTTCAATTTT+GGG - chr3_3:68442502-68442521 None:intergenic 30.0%
! AAAAGAAACGCCTTCAATTT+TGG - chr3_3:68442503-68442522 None:intergenic 30.0%
AATTCGATTTATGGAGTCTT+AGG + chr3_3:68442721-68442740 Msa0467220:intron 30.0%
! TACTTTTGCTGAGATTGATT+TGG + chr3_3:68443185-68443204 Msa0467220:CDS 30.0%
!! ACTTTTGCTGAGATTGATTT+GGG + chr3_3:68443186-68443205 Msa0467220:CDS 30.0%
! GTCATAATTCCACTGATTAT+TGG - chr3_3:68443357-68443376 None:intergenic 30.0%
ATAATCAGTGGAATTATGAC+GGG + chr3_3:68443357-68443376 Msa0467220:CDS 30.0%
!!! TGTTGATTCTGAATCTTTTG+TGG + chr3_3:68443877-68443896 Msa0467220:intron 30.0%
AAAACCTTGAATGTGACTTA+TGG - chr3_3:68443925-68443944 None:intergenic 30.0%
!!! GGTTTTGTTTTGTATATCAG+AGG + chr3_3:68443939-68443958 Msa0467220:intron 30.0%
TCAACAATCTTTCTAATCTG+TGG - chr3_3:68444380-68444399 None:intergenic 30.0%
! AAACAAACCTGTATCTCTTT+TGG - chr3_3:68444461-68444480 None:intergenic 30.0%
!! GATATGTCTAATTTGAGTTG+AGG + chr3_3:68444833-68444852 Msa0467220:intron 30.0%
ATCACTATTTATATACCTCC+AGG - chr3_3:68444869-68444888 None:intergenic 30.0%
!! CCAAAAACACAGTTTTATAG+AGG - chr3_3:68445161-68445180 None:intergenic 30.0%
! CCTCTATAAAACTGTGTTTT+TGG + chr3_3:68445158-68445177 Msa0467220:intron 30.0%
CTGTATAAATTCAATCTGGA+TGG + chr3_3:68445383-68445402 Msa0467220:intron 30.0%
GCTGTATGTCATATTTGTAT+TGG + chr3_3:68445481-68445500 Msa0467220:intron 30.0%
AAGAAGACCATGTAAGTTTA+AGG + chr3_3:68445905-68445924 Msa0467220:intron 30.0%
ACACAAATATATAGGAGAGA+CGG - chr3_3:68446088-68446107 None:intergenic 30.0%
CTCTCCTATATATTTGTGTT+TGG + chr3_3:68446089-68446108 Msa0467220:intron 30.0%
GTAGCCAAACACAAATATAT+AGG - chr3_3:68446096-68446115 None:intergenic 30.0%
TATATGTCTGACAACTTGAT+TGG - chr3_3:68446157-68446176 None:intergenic 30.0%
!!! GTTAGTTTTACTTGCTAACA+AGG + chr3_3:68446240-68446259 Msa0467220:intron 30.0%
AAAATATGCATGACAATACG+TGG + chr3_3:68446475-68446494 Msa0467220:intron 30.0%
AGCATAAGTTTCACATAAGA+TGG + chr3_3:68446529-68446548 Msa0467220:intron 30.0%
CTTATGTCAACTTATGCTTT+AGG - chr3_3:68446573-68446592 None:intergenic 30.0%
! AAGCATAAGTTGACATAAGA+TGG + chr3_3:68446574-68446593 Msa0467220:intron 30.0%
! AGCATAAGTTGACATAAGAT+GGG + chr3_3:68446575-68446594 Msa0467220:intron 30.0%
AAAGAATACTTGAAGGAATC+AGG - chr3_3:68446676-68446695 None:intergenic 30.0%
CCTAGTAAAAGAATACTTGA+AGG - chr3_3:68446683-68446702 None:intergenic 30.0%
! CCTTCAAGTATTCTTTTACT+AGG + chr3_3:68446680-68446699 Msa0467220:intron 30.0%
TGTCTCAAGGTTAATGTTAT+TGG + chr3_3:68447004-68447023 Msa0467220:intron 30.0%
! AAGAGAAGGTTCTTTTAGTA+GGG + chr3_3:68447499-68447518 Msa0467220:CDS 30.0%
! CTTTCTGTAACCAACATTTT+CGG + chr3_3:68447948-68447967 Msa0467220:three_prime_UTR 30.0%
! AACATTTTCGGTGGTTATTT+CGG + chr3_3:68447960-68447979 Msa0467220:three_prime_UTR 30.0%
TTTAACATTTCCTACATGGA+TGG + chr3_3:68448084-68448103 Msa0467220:three_prime_UTR 30.0%
TTAACATTTCCTACATGGAT+GGG + chr3_3:68448085-68448104 Msa0467220:three_prime_UTR 30.0%
!! GTTTCTTTTGCTGTCGTTTA+GGG + chr3_3:68442514-68442533 Msa0467220:five_prime_UTR 35.0%
! TCTTCCTTTCTCCATTTTCA+GGG + chr3_3:68442563-68442582 Msa0467220:five_prime_UTR 35.0%
AAAACCCTGAAAATGGAGAA+AGG - chr3_3:68442570-68442589 None:intergenic 35.0%
TTGATACTATGCGATCTTCA+TGG + chr3_3:68442746-68442765 Msa0467220:exon 35.0%
TGATACTATGCGATCTTCAT+GGG + chr3_3:68442747-68442766 Msa0467220:exon 35.0%
GATAAACTTTGATGCTTACG+AGG + chr3_3:68443116-68443135 Msa0467220:CDS 35.0%
!! ATCTCAGCAAAAGTATTCAC+CGG - chr3_3:68443180-68443199 None:intergenic 35.0%
AGGCGCTTAATCAGAATATT+AGG + chr3_3:68443211-68443230 Msa0467220:CDS 35.0%
TTTGTTTCAGATACACGAAG+AGG + chr3_3:68443571-68443590 Msa0467220:intron 35.0%
AAGCATTATACCACTAGGTT+GGG - chr3_3:68443832-68443851 None:intergenic 35.0%
TAAGCATTATACCACTAGGT+TGG - chr3_3:68443833-68443852 None:intergenic 35.0%
CAACTAAGCATTATACCACT+AGG - chr3_3:68443837-68443856 None:intergenic 35.0%
!! CTGTATCTCTTTTGGAAAAG+TGG - chr3_3:68444453-68444472 None:intergenic 35.0%
! CACTTTTCCAAAAGAGATAC+AGG + chr3_3:68444451-68444470 Msa0467220:CDS 35.0%
TCTAGCTGTTCTACTTCATT+GGG + chr3_3:68444556-68444575 Msa0467220:intron 35.0%
CAAATGTATCCATAGAGACA+AGG - chr3_3:68444617-68444636 None:intergenic 35.0%
AATAGGTGCATCTCTCTAAA+TGG - chr3_3:68444683-68444702 None:intergenic 35.0%
AAGAACACCAGATGCAAATA+TGG - chr3_3:68444747-68444766 None:intergenic 35.0%
! GTGCTGTTAGAGTTAAATAG+TGG + chr3_3:68444811-68444830 Msa0467220:intron 35.0%
ATACATGCAGCAGTGTTAAA+CGG - chr3_3:68445246-68445265 None:intergenic 35.0%
CTGCATGTATGCATTTATCT+GGG + chr3_3:68445256-68445275 Msa0467220:intron 35.0%
GCATCGTGTGCTTAAAAAAA+GGG - chr3_3:68445434-68445453 None:intergenic 35.0%
TGCATCGTGTGCTTAAAAAA+AGG - chr3_3:68445435-68445454 None:intergenic 35.0%
! AGTTGCACATATATTTCTGC+TGG + chr3_3:68445604-68445623 Msa0467220:intron 35.0%
! GAGTTTATTCTCTGAGAAAC+AGG - chr3_3:68445694-68445713 None:intergenic 35.0%
GACTATTGCATGCTTTACTT+TGG + chr3_3:68445720-68445739 Msa0467220:intron 35.0%
! AGCTTTGACTTTAGTCTTTG+TGG + chr3_3:68445754-68445773 Msa0467220:CDS 35.0%
GTAAAAGTTTGCAATGCTCT+TGG + chr3_3:68445980-68445999 Msa0467220:intron 35.0%
GAAAGCAGTGGAAAATTCAT+GGG + chr3_3:68446002-68446021 Msa0467220:intron 35.0%
! TGAGGTAACCTTTTCTTGTT+TGG + chr3_3:68446029-68446048 Msa0467220:intron 35.0%
!! AACCTTTTCTTGTTTGGAGT+TGG + chr3_3:68446035-68446054 Msa0467220:intron 35.0%
TATATAGGAGAGACGGTTAA+TGG - chr3_3:68446081-68446100 None:intergenic 35.0%
! GCATAAGTTGACATAAGATG+GGG + chr3_3:68446576-68446595 Msa0467220:intron 35.0%
! TTTGGTTCACATGAAGCATA+AGG + chr3_3:68446721-68446740 Msa0467220:intron 35.0%
ATATGGATCATTGACGATGA+TGG + chr3_3:68446865-68446884 Msa0467220:intron 35.0%
TATGGATCATTGACGATGAT+GGG + chr3_3:68446866-68446885 Msa0467220:intron 35.0%
ACATCAGTAGCAACCAATAT+GGG - chr3_3:68447182-68447201 None:intergenic 35.0%
TTAACTACATGTGCAACATG+TGG - chr3_3:68447227-68447246 None:intergenic 35.0%
GATGATTATGTACACCGTAT+TGG + chr3_3:68447269-68447288 Msa0467220:CDS 35.0%
ATTATGTACACCGTATTGGA+AGG + chr3_3:68447273-68447292 Msa0467220:CDS 35.0%
! GAAGAGAAGGTTCTTTTAGT+AGG + chr3_3:68447498-68447517 Msa0467220:CDS 35.0%
! AGAGAAGGTTCTTTTAGTAG+GGG + chr3_3:68447500-68447519 Msa0467220:CDS 35.0%
CAAGCCAACATCATTACTTA+TGG + chr3_3:68447793-68447812 Msa0467220:three_prime_UTR 35.0%
GAAATAACCACCGAAAATGT+TGG - chr3_3:68447961-68447980 None:intergenic 35.0%
!! ACATTTTCGGTGGTTATTTC+GGG + chr3_3:68447961-68447980 Msa0467220:three_prime_UTR 35.0%
AAGATGTAGAATATGTGGTG+AGG + chr3_3:68447987-68448006 Msa0467220:three_prime_UTR 35.0%
AGATGTAGAATATGTGGTGA+GGG + chr3_3:68447988-68448007 Msa0467220:three_prime_UTR 35.0%
! CTTTTCATTACAGTCGTATC+TGG + chr3_3:68448022-68448041 Msa0467220:three_prime_UTR 35.0%
GAATGAAAAAGTTCTCTTGC+TGG + chr3_3:68448139-68448158 Msa0467220:three_prime_UTR 35.0%
TCCATCCATCCCAAAATTGA+AGG + chr3_3:68442490-68442509 Msa0467220:five_prime_UTR 40.0%
!! AAACGCCTTCAATTTTGGGA+TGG - chr3_3:68442498-68442517 None:intergenic 40.0%
!! CGTTTCTTTTGCTGTCGTTT+AGG + chr3_3:68442513-68442532 Msa0467220:five_prime_UTR 40.0%
GAAAATGGAGAAAGGAAGAG+AGG - chr3_3:68442562-68442581 None:intergenic 40.0%
! CTCTTCCTTTCTCCATTTTC+AGG + chr3_3:68442562-68442581 Msa0467220:five_prime_UTR 40.0%
AGCAAATCCATTTGCAGATC+AGG + chr3_3:68443047-68443066 Msa0467220:CDS 40.0%
GAATCATCCTGATCTGCAAA+TGG - chr3_3:68443057-68443076 None:intergenic 40.0%
TGATGCTTACGAGGATATTC+CGG + chr3_3:68443125-68443144 Msa0467220:CDS 40.0%
! AGGAAGTTTTCATACCAGAC+AGG + chr3_3:68443596-68443615 Msa0467220:CDS 40.0%
! GGAAGTTTTCATACCAGACA+GGG + chr3_3:68443597-68443616 Msa0467220:CDS 40.0%
! GAAGTTTTCATACCAGACAG+GGG + chr3_3:68443598-68443617 Msa0467220:CDS 40.0%
!! AAACCAACCTGCTGGTTTAT+TGG - chr3_3:68443653-68443672 None:intergenic 40.0%
CTGTCCATAAGTCACATTCA+AGG + chr3_3:68443918-68443937 Msa0467220:intron 40.0%
GTCATTCAAGAACAATACGC+TGG - chr3_3:68444132-68444151 None:intergenic 40.0%
AATCATCGACAGTGAAACTC+TGG - chr3_3:68444306-68444325 None:intergenic 40.0%
GAGTTTCACTGTCGATGATT+AGG + chr3_3:68444306-68444325 Msa0467220:CDS 40.0%
!! TAGGTATCTAGCCTTAGATG+AGG + chr3_3:68444325-68444344 Msa0467220:CDS 40.0%
CTCTAGCTGTTCTACTTCAT+TGG + chr3_3:68444555-68444574 Msa0467220:intron 40.0%
CTAGCTGTTCTACTTCATTG+GGG + chr3_3:68444557-68444576 Msa0467220:intron 40.0%
ATGTATCCATAGAGACAAGG+AGG - chr3_3:68444614-68444633 None:intergenic 40.0%
GTGCATTCCATATTTGCATC+TGG + chr3_3:68444737-68444756 Msa0467220:intron 40.0%
TAAGATGGAAGGAGCAATTG+AGG - chr3_3:68444774-68444793 None:intergenic 40.0%
AGTTGAGGCAATAAATTGCC+TGG + chr3_3:68444848-68444867 Msa0467220:intron 40.0%
!! TGTCTCGTCTTTGACTTTTG+TGG + chr3_3:68444916-68444935 Msa0467220:intron 40.0%
CTTGAACGTACTCAACTCTT+TGG - chr3_3:68445040-68445059 None:intergenic 40.0%
TTGCTCTTTGTGCATGAAGA+AGG - chr3_3:68445091-68445110 None:intergenic 40.0%
CTTCATGCACAAAGAGCAAA+TGG + chr3_3:68445092-68445111 Msa0467220:CDS 40.0%
!! CGTACAAGGAAAGGTATTCT+CGG + chr3_3:68445115-68445134 Msa0467220:intron 40.0%
GCTGCATGTATGCATTTATC+TGG + chr3_3:68445255-68445274 Msa0467220:intron 40.0%
TCGTGTGCTTAAAAAAAGGG+TGG - chr3_3:68445431-68445450 None:intergenic 40.0%
AATATATGTGCAACTGCCAG+AGG - chr3_3:68445599-68445618 None:intergenic 40.0%
! CACATATATTTCTGCTGGTG+TGG + chr3_3:68445609-68445628 Msa0467220:intron 40.0%
GGTGTGGAAGAAATATAGCT+AGG + chr3_3:68445625-68445644 Msa0467220:intron 40.0%
AGTCTTTGTGGAGACAAAGA+AGG + chr3_3:68445766-68445785 Msa0467220:CDS 40.0%
GTCTTTGTGGAGACAAAGAA+GGG + chr3_3:68445767-68445786 Msa0467220:CDS 40.0%
TTCCCAGCAACTACTATTCA+TGG + chr3_3:68445827-68445846 Msa0467220:CDS 40.0%
CACCATGAATAGTAGTTGCT+GGG - chr3_3:68445832-68445851 None:intergenic 40.0%
TCACCATGAATAGTAGTTGC+TGG - chr3_3:68445833-68445852 None:intergenic 40.0%
CAACTACTATTCATGGTGAC+AGG + chr3_3:68445834-68445853 Msa0467220:CDS 40.0%
GGAAAGCAGTGGAAAATTCA+TGG + chr3_3:68446001-68446020 Msa0467220:intron 40.0%
CACCAACTCCAAACAAGAAA+AGG - chr3_3:68446040-68446059 None:intergenic 40.0%
!! AGTTGGTGAAGTGTCAAGTT+GGG + chr3_3:68446052-68446071 Msa0467220:intron 40.0%
GTTTGGCTACCTACTGTATT+AGG + chr3_3:68446106-68446125 Msa0467220:intron 40.0%
TGTGAAGCACAAGCATCATA+TGG + chr3_3:68446848-68446867 Msa0467220:intron 40.0%
ATGGATCATTGACGATGATG+GGG + chr3_3:68446867-68446886 Msa0467220:intron 40.0%
TACCATAGACAAGAGTTCTG+GGG - chr3_3:68446959-68446978 None:intergenic 40.0%
CTACCATAGACAAGAGTTCT+GGG - chr3_3:68446960-68446979 None:intergenic 40.0%
ACTACCATAGACAAGAGTTC+TGG - chr3_3:68446961-68446980 None:intergenic 40.0%
ATCAGTAGCAACCAATATGG+GGG - chr3_3:68447180-68447199 None:intergenic 40.0%
CATCAGTAGCAACCAATATG+GGG - chr3_3:68447181-68447200 None:intergenic 40.0%
CACATCAGTAGCAACCAATA+TGG - chr3_3:68447183-68447202 None:intergenic 40.0%
! CATATTGGTTGCTACTGATG+TGG + chr3_3:68447181-68447200 Msa0467220:CDS 40.0%
!! CAAATCAAGAAGTACCTGCT+TGG + chr3_3:68447390-68447409 Msa0467220:CDS 40.0%
AACCTTCTCTTCGAAAGTCA+CGG - chr3_3:68447490-68447509 None:intergenic 40.0%
! TTGGCTTGAAAACACTAGGA+GGG - chr3_3:68447781-68447800 None:intergenic 40.0%
!! GATGTTGGCTTGAAAACACT+AGG - chr3_3:68447785-68447804 None:intergenic 40.0%
TTTACAACGCTAATCGCCAA+GGG + chr3_3:68447816-68447835 Msa0467220:three_prime_UTR 40.0%
CTACACAACTTCTATTCGAG+TGG - chr3_3:68447870-68447889 None:intergenic 40.0%
AGAAGTTGTGTAGTGTTAGC+AGG + chr3_3:68447877-68447896 Msa0467220:three_prime_UTR 40.0%
! TCTGTAACCAACATTTTCGG+TGG + chr3_3:68447951-68447970 Msa0467220:three_prime_UTR 40.0%
!! CATTTTCGGTGGTTATTTCG+GGG + chr3_3:68447962-68447981 Msa0467220:three_prime_UTR 40.0%
GGGAGAAGATGTAGAATATG+TGG + chr3_3:68447982-68448001 Msa0467220:three_prime_UTR 40.0%
GATGTAGAATATGTGGTGAG+GGG + chr3_3:68447989-68448008 Msa0467220:three_prime_UTR 40.0%
ATTTCCTACATGGATGGGTA+AGG + chr3_3:68448090-68448109 Msa0467220:three_prime_UTR 40.0%
AAAACCTTACCCATCCATGT+AGG - chr3_3:68448097-68448116 None:intergenic 40.0%
TCTATTCTACCTCAGGCTCA+GGG - chr3_3:68442459-68442478 None:intergenic 45.0%
ATCTATTCTACCTCAGGCTC+AGG - chr3_3:68442460-68442479 None:intergenic 45.0%
!!! GCCTTCAATTTTGGGATGGA+TGG - chr3_3:68442494-68442513 None:intergenic 45.0%
GAGAGAGAAGAGAGAGAAGA+AGG - chr3_3:68442616-68442635 None:intergenic 45.0%
! TGATTTGGCTGCAAATTCCG+CGG + chr3_3:68442771-68442790 Msa0467220:CDS 45.0%
TTAACAGAAGCAGCAGCAGA+AGG - chr3_3:68442820-68442839 None:intergenic 45.0%
AACGTAAACAGGTCGAGTGT+TGG - chr3_3:68442851-68442870 None:intergenic 45.0%
AGATGAGGAGGAACGTAAAC+AGG - chr3_3:68442862-68442881 None:intergenic 45.0%
TTTACGTTCCTCCTCATCTG+AGG + chr3_3:68442863-68442882 Msa0467220:CDS 45.0%
TGCAGATCAGGATGATTCTG+AGG + chr3_3:68443059-68443078 Msa0467220:CDS 45.0%
AAGAGGAGCAGGAGAATACA+GGG + chr3_3:68443094-68443113 Msa0467220:CDS 45.0%
!! TCAGCAAAAGTATTCACCGG+TGG - chr3_3:68443177-68443196 None:intergenic 45.0%
CATCAAATCCCTTCCAGCAA+GGG - chr3_3:68443289-68443308 None:intergenic 45.0%
TCTTGTTCTCTCGCCAACTA+GGG + chr3_3:68443431-68443450 Msa0467220:CDS 45.0%
TTCAGATACACGAAGAGGCT+AGG + chr3_3:68443576-68443595 Msa0467220:intron 45.0%
TTTCATACCAGACAGGGGTT+AGG + chr3_3:68443603-68443622 Msa0467220:CDS 45.0%
TTCATACCAGACAGGGGTTA+GGG + chr3_3:68443604-68443623 Msa0467220:CDS 45.0%
! GTTAGGGTGGTTGTTGCTTA+CGG + chr3_3:68443620-68443639 Msa0467220:CDS 45.0%
!! ACTAGGTTGGGTTAGCTATG+TGG - chr3_3:68443820-68443839 None:intergenic 45.0%
ACATAGCTAACCCAACCTAG+TGG + chr3_3:68443819-68443838 Msa0467220:intron 45.0%
GACATTCTTGTTGCAACTCC+AGG + chr3_3:68444254-68444273 Msa0467220:CDS 45.0%
TTCTTGTTGCAACTCCAGGA+AGG + chr3_3:68444258-68444277 Msa0467220:CDS 45.0%
AACAAATCAACCAGCCTTCC+TGG - chr3_3:68444275-68444294 None:intergenic 45.0%
!! AGGAAGGCTGGTTGATTTGT+TGG + chr3_3:68444274-68444293 Msa0467220:CDS 45.0%
! TAGCCTTAGATGAGGCTGAT+AGG + chr3_3:68444333-68444352 Msa0467220:CDS 45.0%
CATCCTATCAGCCTCATCTA+AGG - chr3_3:68444339-68444358 None:intergenic 45.0%
GCTGATAGGATGCTGGATAT+GGG + chr3_3:68444347-68444366 Msa0467220:CDS 45.0%
! ATAGTTTGTCTGACACCTGC+TGG - chr3_3:68444419-68444438 None:intergenic 45.0%
AGACAAGGAGGCAAGAAAAG+CGG - chr3_3:68444602-68444621 None:intergenic 45.0%
TTCTTGCCTCCTTGTCTCTA+TGG + chr3_3:68444605-68444624 Msa0467220:intron 45.0%
TGAGGCAATAAATTGCCTGG+AGG + chr3_3:68444851-68444870 Msa0467220:intron 45.0%
!!! TTTTCTGGCTGTTGGAAGAG+TGG + chr3_3:68444992-68445011 Msa0467220:CDS 45.0%
!! TTTCTGGCTGTTGGAAGAGT+GGG + chr3_3:68444993-68445012 Msa0467220:CDS 45.0%
TGACAAGAGAAGCCATCTCA+TGG + chr3_3:68445064-68445083 Msa0467220:CDS 45.0%
CATGAAGAAGGTCCATGAGA+TGG - chr3_3:68445079-68445098 None:intergenic 45.0%
CAAAGAGCAAATGGCGTACA+AGG + chr3_3:68445101-68445120 Msa0467220:CDS 45.0%
AGCAAATGGCGTACAAGGAA+AGG + chr3_3:68445106-68445125 Msa0467220:CDS 45.0%
!! TCAATCTGGATGGGTTGTTC+TGG + chr3_3:68445393-68445412 Msa0467220:intron 45.0%
AGAGCTAAGACAGACAGACA+AGG - chr3_3:68445561-68445580 None:intergenic 45.0%
GGAAAATTCATGGGTGTGTG+AGG + chr3_3:68446011-68446030 Msa0467220:intron 45.0%
!! GAGTTGGTGAAGTGTCAAGT+TGG + chr3_3:68446051-68446070 Msa0467220:intron 45.0%
CATGACAATATGCAGGCTTG+TGG + chr3_3:68446603-68446622 Msa0467220:intron 45.0%
ACAATATGCAGGCTTGTGGA+TGG + chr3_3:68446607-68446626 Msa0467220:intron 45.0%
! TGGATCATTGACGATGATGG+GGG + chr3_3:68446868-68446887 Msa0467220:intron 45.0%
TTCCCCAGAACTCTTGTCTA+TGG + chr3_3:68446954-68446973 Msa0467220:intron 45.0%
GCAACAGCTATGTTGTCTCA+AGG + chr3_3:68446991-68447010 Msa0467220:intron 45.0%
! TGCAGGCATTGCAAAGTATG+AGG - chr3_3:68447116-68447135 None:intergenic 45.0%
TCATACTTTGCAATGCCTGC+AGG + chr3_3:68447115-68447134 Msa0467220:intron 45.0%
TACACCGTATTGGAAGGACA+GGG + chr3_3:68447279-68447298 Msa0467220:CDS 45.0%
! GAAGGTTCTTTTAGTAGGGG+TGG + chr3_3:68447503-68447522 Msa0467220:CDS 45.0%
TACCATGGTGCAGGAAATAG+CGG + chr3_3:68447533-68447552 Msa0467220:CDS 45.0%
!! GAAATAGCGGTGGTGGATAT+GGG + chr3_3:68447546-68447565 Msa0467220:CDS 45.0%
!! AAATAGCGGTGGTGGATATG+GGG + chr3_3:68447547-68447566 Msa0467220:CDS 45.0%
GAAAAATCAGTCCCATGCAC+TGG - chr3_3:68447639-68447658 None:intergenic 45.0%
!! GTTGGCTTGAAAACACTAGG+AGG - chr3_3:68447782-68447801 None:intergenic 45.0%
GTTTACAACGCTAATCGCCA+AGG + chr3_3:68447815-68447834 Msa0467220:three_prime_UTR 45.0%
TGTGTAGTGTTAGCAGGTGT+TGG + chr3_3:68447883-68447902 Msa0467220:three_prime_UTR 45.0%
CTCTTGCTGGATGCTTGTAT+TGG + chr3_3:68448152-68448171 Msa0467220:three_prime_UTR 45.0%
! GCGATCTTCATGGGCTGATT+TGG + chr3_3:68442756-68442775 Msa0467220:CDS 50.0%
! TTATCGAAAGCAGGTGCTGC+TGG - chr3_3:68442919-68442938 None:intergenic 50.0%
GCACCTGCTTTCGATAACTC+CGG + chr3_3:68442922-68442941 Msa0467220:CDS 50.0%
GATCCGGAGTTATCGAAAGC+AGG - chr3_3:68442928-68442947 None:intergenic 50.0%
TGAGGAGCCTGTTACTCAAG+AGG + chr3_3:68443077-68443096 Msa0467220:CDS 50.0%
TCCTGCTCCTCTTGAGTAAC+AGG - chr3_3:68443087-68443106 None:intergenic 50.0%
CAAGAGGAGCAGGAGAATAC+AGG + chr3_3:68443093-68443112 Msa0467220:CDS 50.0%
TGCTTACGAGGATATTCCGG+TGG + chr3_3:68443128-68443147 Msa0467220:CDS 50.0%
TGGTGGAAATGTTCCTCCAC+CGG + chr3_3:68443158-68443177 Msa0467220:CDS 50.0%
!! GCAAAAGTATTCACCGGTGG+AGG - chr3_3:68443174-68443193 None:intergenic 50.0%
!! TGCTGAGATTGATTTGGGCG+AGG + chr3_3:68443191-68443210 Msa0467220:CDS 50.0%
GCAATTCCGATTTCCCTTGC+TGG + chr3_3:68443273-68443292 Msa0467220:CDS 50.0%
TTCCGATTTCCCTTGCTGGA+AGG + chr3_3:68443277-68443296 Msa0467220:CDS 50.0%
TCCGATTTCCCTTGCTGGAA+GGG + chr3_3:68443278-68443297 Msa0467220:CDS 50.0%
TCCCTTCCAGCAAGGGAAAT+CGG - chr3_3:68443282-68443301 None:intergenic 50.0%
CCATCAAATCCCTTCCAGCA+AGG - chr3_3:68443290-68443309 None:intergenic 50.0%
CCTTGCTGGAAGGGATTTGA+TGG + chr3_3:68443287-68443306 Msa0467220:CDS 50.0%
! TTTGATGGCTTGTGCGCAGA+CGG + chr3_3:68443302-68443321 Msa0467220:CDS 50.0%
AACAAGAGCAAGCGGACACA+CGG - chr3_3:68443418-68443437 None:intergenic 50.0%
CTCTTGTTCTCTCGCCAACT+AGG + chr3_3:68443430-68443449 Msa0467220:CDS 50.0%
! TGCATCGATAGCTCCCTAGT+TGG - chr3_3:68443447-68443466 None:intergenic 50.0%
AACTAGGGAGCTATCGATGC+AGG + chr3_3:68443446-68443465 Msa0467220:CDS 50.0%
TGGTGCTCCAATAAACCAGC+AGG + chr3_3:68443643-68443662 Msa0467220:CDS 50.0%
GCTCCAATAAACCAGCAGGT+TGG + chr3_3:68443647-68443666 Msa0467220:intron 50.0%
TGGGACATAAACCAACCTGC+TGG - chr3_3:68443661-68443680 None:intergenic 50.0%
AGATGAGGCTGATAGGATGC+TGG + chr3_3:68444340-68444359 Msa0467220:CDS 50.0%
GGCTGATAGGATGCTGGATA+TGG + chr3_3:68444346-68444365 Msa0467220:CDS 50.0%
GCGGAGAGACAAAGTCTAAC+TGG - chr3_3:68444583-68444602 None:intergenic 50.0%
!! CTGTCTGTCTTAGCTCTGTC+AGG + chr3_3:68445564-68445583 Msa0467220:intron 50.0%
TGTCAGGTTATGCCAACCTC+TGG + chr3_3:68445580-68445599 Msa0467220:intron 50.0%
TATGTGCAACTGCCAGAGGT+TGG - chr3_3:68445595-68445614 None:intergenic 50.0%
CACACGCGCGATAAGAAAAC+AGG - chr3_3:68445655-68445674 None:intergenic 50.0%
TCATGGTGACAGGTCACAAC+AGG + chr3_3:68445844-68445863 Msa0467220:CDS 50.0%
GCAATGCTCTTGGAAAGCAG+TGG + chr3_3:68445990-68446009 Msa0467220:intron 50.0%
GGGTCAGCATGACAATATGC+AGG + chr3_3:68446596-68446615 Msa0467220:intron 50.0%
AAGTGGCAACACCCCCATAT+TGG + chr3_3:68447166-68447185 Msa0467220:CDS 50.0%
GTACACCGTATTGGAAGGAC+AGG + chr3_3:68447278-68447297 Msa0467220:CDS 50.0%
CTCTCCCTGTCCTTCCAATA+CGG - chr3_3:68447286-68447305 None:intergenic 50.0%
ACAGGGAGAGCAGGAAAGAA+AGG + chr3_3:68447296-68447315 Msa0467220:CDS 50.0%
GAAAGTCACGGCCACCAAAT+CGG - chr3_3:68447478-68447497 None:intergenic 50.0%
!! AGGGGTGGTTCTGATTACCA+TGG + chr3_3:68447518-68447537 Msa0467220:CDS 50.0%
! GGTTCTGATTACCATGGTGC+AGG + chr3_3:68447524-68447543 Msa0467220:CDS 50.0%
!! GGAAATAGCGGTGGTGGATA+TGG + chr3_3:68447545-68447564 Msa0467220:CDS 50.0%
! TATGGTGGAGGATATGGTGG+TGG + chr3_3:68447581-68447600 Msa0467220:CDS 50.0%
! ATGGTGGAGGATATGGTGGT+GGG + chr3_3:68447582-68447601 Msa0467220:CDS 50.0%
CTAATCGCCAAGGGACATGT+GGG + chr3_3:68447825-68447844 Msa0467220:three_prime_UTR 50.0%
ATACACACCCACATGTCCCT+TGG - chr3_3:68447835-68447854 None:intergenic 50.0%
!! GTGTTAGCAGGTGTTGGCAA+TGG + chr3_3:68447889-68447908 Msa0467220:three_prime_UTR 50.0%
! ATGTGGTGAGGGGTTGATTG+AGG + chr3_3:68447999-68448018 Msa0467220:three_prime_UTR 50.0%
!! TGGCGGTGTTGGTGCATTCT+CGG - chr3_3:68442797-68442816 None:intergenic 55.0%
ACAGAAGCAGCAGCAGAAGG+TGG - chr3_3:68442817-68442836 None:intergenic 55.0%
TCGATAACTCCGGATCGCGT+TGG + chr3_3:68442932-68442951 Msa0467220:CDS 55.0%
CGATAACTCCGGATCGCGTT+GGG + chr3_3:68442933-68442952 Msa0467220:CDS 55.0%
!! GTGGTCGTGGTGGTGGTTAT+GGG + chr3_3:68442992-68443011 Msa0467220:CDS 55.0%
! GGTGGTGGTTATGGGAACAG+AGG + chr3_3:68443000-68443019 Msa0467220:CDS 55.0%
GGTGGTTATGGGAACAGAGG+TGG + chr3_3:68443003-68443022 Msa0467220:CDS 55.0%
GGTTATGGGAACAGAGGTGG+TGG + chr3_3:68443006-68443025 Msa0467220:CDS 55.0%
! TATGGGAACAGAGGTGGTGG+TGG + chr3_3:68443009-68443028 Msa0467220:CDS 55.0%
!! GAACAGAGGTGGTGGTGGTT+GGG + chr3_3:68443014-68443033 Msa0467220:CDS 55.0%
GCCTGTTACTCAAGAGGAGC+AGG + chr3_3:68443083-68443102 Msa0467220:CDS 55.0%
GATATTCCGGTGGAGACGAG+TGG + chr3_3:68443138-68443157 Msa0467220:CDS 55.0%
TTTCCACCACTCGTCTCCAC+CGG - chr3_3:68443147-68443166 None:intergenic 55.0%
TGAAGCCGACACCTGTTCAG+CGG + chr3_3:68443247-68443266 Msa0467220:CDS 55.0%
GGAATTGCATGCCGCTGAAC+AGG - chr3_3:68443261-68443280 None:intergenic 55.0%
! TTGATGGCTTGTGCGCAGAC+GGG + chr3_3:68443303-68443322 Msa0467220:CDS 55.0%
GGCGAGAGAACAAGAGCAAG+CGG - chr3_3:68443426-68443445 None:intergenic 55.0%
ATACCAGACAGGGGTTAGGG+TGG + chr3_3:68443607-68443626 Msa0467220:CDS 55.0%
! AGGGTGGTTGTTGCTTACGG+TGG + chr3_3:68443623-68443642 Msa0467220:CDS 55.0%
CAGCTACGAGAGCTTGAGAG+AGG + chr3_3:68444227-68444246 Msa0467220:intron 55.0%
ACGAGAGCTTGAGAGAGGAG+TGG + chr3_3:68444232-68444251 Msa0467220:CDS 55.0%
TGTTGCAACTCCAGGAAGGC+TGG + chr3_3:68444262-68444281 Msa0467220:CDS 55.0%
CAAATGGACATGCCTCCAGC+AGG + chr3_3:68444401-68444420 Msa0467220:CDS 55.0%
GTTTGTCTGACACCTGCTGG+AGG - chr3_3:68444416-68444435 None:intergenic 55.0%
AAAGAAGGGAGCTGATGCGC+TGG + chr3_3:68445781-68445800 Msa0467220:CDS 55.0%
GCAATGCCTGCAGGAAAGAG+AGG + chr3_3:68447124-68447143 Msa0467220:intron 55.0%
ATGCTGCCTCTCTTTCCTGC+AGG - chr3_3:68447133-68447152 None:intergenic 55.0%
ATTGGAAGGACAGGGAGAGC+AGG + chr3_3:68447287-68447306 Msa0467220:CDS 55.0%
! AAGTACCTGCTTGGCTCTCG+CGG + chr3_3:68447399-68447418 Msa0467220:CDS 55.0%
CAAATCGGCCTCCTCCTGAA+CGG - chr3_3:68447463-68447482 None:intergenic 55.0%
GGCCGTGACTTTCGAAGAGA+AGG + chr3_3:68447485-68447504 Msa0467220:CDS 55.0%
! CACCGCTATTTCCTGCACCA+TGG - chr3_3:68447538-68447557 None:intergenic 55.0%
CATGGTGCAGGAAATAGCGG+TGG + chr3_3:68447536-68447555 Msa0467220:CDS 55.0%
GTGGATATGGGGCTTCTGGT+GGG + chr3_3:68447558-68447577 Msa0467220:CDS 55.0%
! TATGGGGCTTCTGGTGGGTA+TGG + chr3_3:68447563-68447582 Msa0467220:CDS 55.0%
! GGTGGGTATGGTGGAGGATA+TGG + chr3_3:68447575-68447594 Msa0467220:CDS 55.0%
! GGGTATGGTGGAGGATATGG+TGG + chr3_3:68447578-68447597 Msa0467220:CDS 55.0%
!! GGATATGGTGGTGGGTATGC+TGG + chr3_3:68447590-68447609 Msa0467220:CDS 55.0%
GGGTATGCTGGAAATAGCGC+CGG + chr3_3:68447602-68447621 Msa0467220:CDS 55.0%
GCTAATCGCCAAGGGACATG+TGG + chr3_3:68447824-68447843 Msa0467220:three_prime_UTR 55.0%
GGGACATGTGGGTGTGTATG+TGG + chr3_3:68447836-68447855 Msa0467220:three_prime_UTR 55.0%
TGTTGGTGCATTCTCGGCCG+CGG - chr3_3:68442791-68442810 None:intergenic 60.0%
GAAGCAGCAGCAGAAGGTGG+CGG - chr3_3:68442814-68442833 None:intergenic 60.0%
CCACGGTTCCTCAGATGAGG+AGG - chr3_3:68442874-68442893 None:intergenic 60.0%
CCTCCTCATCTGAGGAACCG+TGG + chr3_3:68442871-68442890 Msa0467220:CDS 60.0%
GGTCCACGGTTCCTCAGATG+AGG - chr3_3:68442877-68442896 None:intergenic 60.0%
! GTGCTGGTGCTGAAGGTCCA+CGG - chr3_3:68442891-68442910 None:intergenic 60.0%
!! AAAGCAGGTGCTGCTGGTGC+AGG - chr3_3:68442913-68442932 None:intergenic 60.0%
CGGTAATCGTTCCTAGGCGG+AGG - chr3_3:68442961-68442980 None:intergenic 60.0%
CCGCGGTAATCGTTCCTAGG+CGG - chr3_3:68442964-68442983 None:intergenic 60.0%
CCGCCTAGGAACGATTACCG+CGG + chr3_3:68442961-68442980 Msa0467220:CDS 60.0%
CCACCGCGGTAATCGTTCCT+AGG - chr3_3:68442967-68442986 None:intergenic 60.0%
CCTAGGAACGATTACCGCGG+TGG + chr3_3:68442964-68442983 Msa0467220:CDS 60.0%
AGGAACGATTACCGCGGTGG+TGG + chr3_3:68442967-68442986 Msa0467220:CDS 60.0%
! AACGATTACCGCGGTGGTGG+TGG + chr3_3:68442970-68442989 Msa0467220:CDS 60.0%
!! GGTGGTCGTGGTGGTGGTTA+TGG + chr3_3:68442991-68443010 Msa0467220:CDS 60.0%
!! GGAACAGAGGTGGTGGTGGT+TGG + chr3_3:68443013-68443032 Msa0467220:CDS 60.0%
ATTCCGGTGGAGACGAGTGG+TGG + chr3_3:68443141-68443160 Msa0467220:CDS 60.0%
GCATGCCGCTGAACAGGTGT+CGG - chr3_3:68443255-68443274 None:intergenic 60.0%
CAACCACCCTAACCCCTGTC+TGG - chr3_3:68443613-68443632 None:intergenic 60.0%
GAGCTGATGCGCTGGAACAC+TGG + chr3_3:68445789-68445808 Msa0467220:CDS 60.0%
GCTACTGATGTGGCTGCACG+TGG + chr3_3:68447191-68447210 Msa0467220:CDS 60.0%
GGAGGAAAGAACCGCCGTTC+AGG + chr3_3:68447446-68447465 Msa0467220:CDS 60.0%
GGAAAGAACCGCCGTTCAGG+AGG + chr3_3:68447449-68447468 Msa0467220:CDS 60.0%
AAGAACCGCCGTTCAGGAGG+AGG + chr3_3:68447452-68447471 Msa0467220:CDS 60.0%
CGTTCAGGAGGAGGCCGATT+TGG + chr3_3:68447461-68447480 Msa0467220:CDS 60.0%
!! TCAGGAGGAGGCCGATTTGG+TGG + chr3_3:68447464-68447483 Msa0467220:CDS 60.0%
GGTGCAGGAAATAGCGGTGG+TGG + chr3_3:68447539-68447558 Msa0467220:CDS 60.0%
!! GGTGGTGGATATGGGGCTTC+TGG + chr3_3:68447554-68447573 Msa0467220:CDS 60.0%
GGTGGATATGGGGCTTCTGG+TGG + chr3_3:68447557-68447576 Msa0467220:CDS 60.0%
! GCTTCTGGTGGGTATGGTGG+AGG + chr3_3:68447569-68447588 Msa0467220:CDS 60.0%
!! CTGGAAATAGCGCCGGTCCT+GGG + chr3_3:68447609-68447628 Msa0467220:CDS 60.0%
!! TGGAAATAGCGCCGGTCCTG+GGG + chr3_3:68447610-68447629 Msa0467220:CDS 60.0%
TCCTGGGGTGACCAGTGCAT+GGG + chr3_3:68447625-68447644 Msa0467220:CDS 60.0%
! GCAGCAGAAGGTGGCGGTGT+TGG - chr3_3:68442808-68442827 None:intergenic 65.0%
!! GGTGCAGGTGCTGGTGCTGA+AGG - chr3_3:68442898-68442917 None:intergenic 65.0%
!! GATTACCGCGGTGGTGGTGG+TGG + chr3_3:68442973-68442992 Msa0467220:CDS 65.0%
! GCTTGTGCGCAGACGGGTTC+AGG + chr3_3:68443309-68443328 Msa0467220:CDS 65.0%
TGACGGGACAGCCTGCACAG+AGG + chr3_3:68443373-68443392 Msa0467220:CDS 65.0%
ATCGGCCTCCTCCTGAACGG+CGG - chr3_3:68447460-68447479 None:intergenic 65.0%
! GGGGCTTCTGGTGGGTATGG+TGG + chr3_3:68447566-68447585 Msa0467220:CDS 65.0%
!! GCTGGAAATAGCGCCGGTCC+TGG + chr3_3:68447608-68447627 Msa0467220:CDS 65.0%
! TGCACTGGTCACCCCAGGAC+CGG - chr3_3:68447624-68447643 None:intergenic 65.0%
GTCCTGGGGTGACCAGTGCA+TGG + chr3_3:68447624-68447643 Msa0467220:CDS 65.0%
! TCCCATGCACTGGTCACCCC+AGG - chr3_3:68447629-68447648 None:intergenic 65.0%
! GAAGGCGCACCCTGAGCCTG+AGG + chr3_3:68442447-68442466 Msa0467220:five_prime_UTR 70.0%
!! GGTGCTGCTGGTGCAGGTGC+TGG - chr3_3:68442907-68442926 None:intergenic 70.0%
!! CGGAGGTGCCCAACGCGATC+CGG - chr3_3:68442944-68442963 None:intergenic 70.0%
CACGACCACCACCACCACCG+CGG - chr3_3:68442981-68443000 None:intergenic 70.0%
!! GGTGGTGGTGGTGGTCGTGG+TGG + chr3_3:68442982-68443001 Msa0467220:CDS 70.0%
!! GGTGGTGGTGGTCGTGGTGG+TGG + chr3_3:68442985-68443004 Msa0467220:CDS 70.0%
CTGCACAGAGGCCGCCTCGT+GGG + chr3_3:68443385-68443404 Msa0467220:CDS 70.0%
TGCACAGAGGCCGCCTCGTG+GGG + chr3_3:68443386-68443405 Msa0467220:CDS 70.0%
ACGGTACGCACCCCACGAGG+CGG - chr3_3:68443399-68443418 None:intergenic 70.0%
CACACGGTACGCACCCCACG+AGG - chr3_3:68443402-68443421 None:intergenic 70.0%
GCGAACCGCGAGAGCCAAGC+AGG - chr3_3:68447407-68447426 None:intergenic 70.0%
CGCGTTGGGCACCTCCGCCT+AGG + chr3_3:68442947-68442966 Msa0467220:CDS 75.0%
!! CGCGGTGGTGGTGGTGGTCG+TGG + chr3_3:68442979-68442998 Msa0467220:CDS 75.0%
CCACGAGGCGGCCTCTGTGC+AGG - chr3_3:68443387-68443406 None:intergenic 75.0%
CCTGCACAGAGGCCGCCTCG+TGG + chr3_3:68443384-68443403 Msa0467220:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 68442441 68448227 68442441 ID=Msa0467220;Name=Msa0467220
chr3_3 mRNA 68442441 68448227 68442441 ID=Msa0467220-mRNA-1;Parent=Msa0467220;Name=Msa0467220-mRNA-1;_AED=0.28;_eAED=0.28;_QI=180|1|1|1|0.83|0.71|7|575|612
chr3_3 exon 68442441 68442609 68442441 ID=Msa0467220-mRNA-1:exon:15845;Parent=Msa0467220-mRNA-1
chr3_3 exon 68442743 68443467 68442743 ID=Msa0467220-mRNA-1:exon:15846;Parent=Msa0467220-mRNA-1
chr3_3 exon 68443581 68443664 68443581 ID=Msa0467220-mRNA-1:exon:15847;Parent=Msa0467220-mRNA-1
chr3_3 exon 68444230 68444472 68444230 ID=Msa0467220-mRNA-1:exon:15848;Parent=Msa0467220-mRNA-1
chr3_3 exon 68444960 68445127 68444960 ID=Msa0467220-mRNA-1:exon:15849;Parent=Msa0467220-mRNA-1
chr3_3 exon 68445752 68445865 68445752 ID=Msa0467220-mRNA-1:exon:15850;Parent=Msa0467220-mRNA-1
chr3_3 exon 68447137 68448227 68447137 ID=Msa0467220-mRNA-1:exon:15851;Parent=Msa0467220-mRNA-1
chr3_3 five_prime_UTR 68442441 68442609 68442441 ID=Msa0467220-mRNA-1:five_prime_utr;Parent=Msa0467220-mRNA-1
chr3_3 five_prime_UTR 68442743 68442753 68442743 ID=Msa0467220-mRNA-1:five_prime_utr;Parent=Msa0467220-mRNA-1
chr3_3 CDS 68442754 68443467 68442754 ID=Msa0467220-mRNA-1:cds;Parent=Msa0467220-mRNA-1
chr3_3 CDS 68443581 68443664 68443581 ID=Msa0467220-mRNA-1:cds;Parent=Msa0467220-mRNA-1
chr3_3 CDS 68444230 68444472 68444230 ID=Msa0467220-mRNA-1:cds;Parent=Msa0467220-mRNA-1
chr3_3 CDS 68444960 68445127 68444960 ID=Msa0467220-mRNA-1:cds;Parent=Msa0467220-mRNA-1
chr3_3 CDS 68445752 68445865 68445752 ID=Msa0467220-mRNA-1:cds;Parent=Msa0467220-mRNA-1
chr3_3 CDS 68447137 68447652 68447137 ID=Msa0467220-mRNA-1:cds;Parent=Msa0467220-mRNA-1
chr3_3 three_prime_UTR 68447653 68448227 68447653 ID=Msa0467220-mRNA-1:three_prime_utr;Parent=Msa0467220-mRNA-1
Gene Sequence

>Msa0467220

ATGCGATCTTCATGGGCTGATTTGGCTGCAAATTCCGCGGCCGAGAATGCACCAACACCGCCACCTTCTGCTGCTGCTTCTGTTAACAATGCTGCCAACACTCGACCTGTTTACGTTCCTCCTCATCTGAGGAACCGTGGACCTTCAGCACCAGCACCTGCACCAGCAGCACCTGCTTTCGATAACTCCGGATCGCGTTGGGCACCTCCGCCTAGGAACGATTACCGCGGTGGTGGTGGTGGTCGTGGTGGTGGTTATGGGAACAGAGGTGGTGGTGGTTGGGATCGTCGTGAAGCAAATCCATTTGCAGATCAGGATGATTCTGAGGAGCCTGTTACTCAAGAGGAGCAGGAGAATACAGGGATAAACTTTGATGCTTACGAGGATATTCCGGTGGAGACGAGTGGTGGAAATGTTCCTCCACCGGTGAATACTTTTGCTGAGATTGATTTGGGCGAGGCGCTTAATCAGAATATTAGGCGATGTAAGTACGTGAAGCCGACACCTGTTCAGCGGCATGCAATTCCGATTTCCCTTGCTGGAAGGGATTTGATGGCTTGTGCGCAGACGGGTTCAGGAAAGACTGCTGCGTTTTGTTTTCCAATAATCAGTGGAATTATGACGGGACAGCCTGCACAGAGGCCGCCTCGTGGGGTGCGTACCGTGTGTCCGCTTGCTCTTGTTCTCTCGCCAACTAGGGAGCTATCGATGCAGATACACGAAGAGGCTAGGAAGTTTTCATACCAGACAGGGGTTAGGGTGGTTGTTGCTTACGGTGGTGCTCCAATAAACCAGCAGCTACGAGAGCTTGAGAGAGGAGTGGACATTCTTGTTGCAACTCCAGGAAGGCTGGTTGATTTGTTGGAAAGAGCCAGAGTTTCACTGTCGATGATTAGGTATCTAGCCTTAGATGAGGCTGATAGGATGCTGGATATGGGTTTTGAGCCACAGATTAGAAAGATTGTTGAACAAATGGACATGCCTCCAGCAGGTGTCAGACAAACTATGTTGTTCAGTGCCACTTTTCCAAAAGAGATACAGAGACTAGCCTCTGATTTCCTTTCAAATTATATTTTTCTGGCTGTTGGAAGAGTGGGATCAAGTACCGATTTAATTGACCAAAGAGTTGAGTACGTTCAAGAGTCTGACAAGAGAAGCCATCTCATGGACCTTCTTCATGCACAAAGAGCAAATGGCGTACAAGGAAAGCAAGCTTTGACTTTAGTCTTTGTGGAGACAAAGAAGGGAGCTGATGCGCTGGAACACTGGTTGTGTCTTAATAATTTCCCAGCAACTACTATTCATGGTGACAGGTCACAACAGGAAAGAGAGGCAGCATTAAGATCATTTAAAAGTGGCAACACCCCCATATTGGTTGCTACTGATGTGGCTGCACGTGGTCTTGACATACCACATGTTGCACATGTAGTTAACTTTGATCTTCCCAATGACATTGATGATTATGTACACCGTATTGGAAGGACAGGGAGAGCAGGAAAGAAAGGTCTTGCAACAGCGTTCTTTAATGAAAACAACACATCTATGGCAAGATCTCTACAAGATTTAATGCAAGAAGCAAATCAAGAAGTACCTGCTTGGCTCTCGCGGTTCGCTGCACGTTCATCCTTTGGTGGAGGAAAGAACCGCCGTTCAGGAGGAGGCCGATTTGGTGGCCGTGACTTTCGAAGAGAAGGTTCTTTTAGTAGGGGTGGTTCTGATTACCATGGTGCAGGAAATAGCGGTGGTGGATATGGGGCTTCTGGTGGGTATGGTGGAGGATATGGTGGTGGGTATGCTGGAAATAGCGCCGGTCCTGGGGTGACCAGTGCATGGGACTGA
Protein sequence

>Msa0467220

MRSSWADLAANSAAENAPTPPPSAAASVNNAANTRPVYVPPHLRNRGPSAPAPAPAAPAFDNSGSRWAPPPRNDYRGGGGGRGGGYGNRGGGGWDRREANPFADQDDSEEPVTQEEQENTGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVPAWLSRFAARSSFGGGKNRRSGGGRFGGRDFRREGSFSRGGSDYHGAGNSGGGYGASGGYGGGYGGGYAGNSAGPGVTSAWD*