Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722140 | XP_003613228.1 | 98.561 | 278 | 4 | 0 | 1 | 278 | 1 | 278 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722140 | sp|P27141|CAHC_TOBAC | 71.374 | 262 | 74 | 1 | 18 | 278 | 60 | 321 | 7.61e-140 | 399 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722140 | G7K1D4 | 98.561 | 278 | 4 | 0 | 1 | 278 | 1 | 278 | 0.0 | 570 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0657060 | Msa0722140 | 0.803234 | 3.842574e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722140 | MtrunA17_Chr5g0413551 | 98.438 | 256 | 4 | 0 | 23 | 278 | 1 | 256 | 0.0 | 525 |
| Msa0722140 | MtrunA17_Chr8g0365441 | 81.250 | 256 | 47 | 1 | 23 | 278 | 1 | 255 | 1.22e-157 | 439 |
| Msa0722140 | MtrunA17_Chr6g0450641 | 63.158 | 266 | 92 | 2 | 18 | 278 | 67 | 331 | 2.98e-122 | 352 |
| Msa0722140 | MtrunA17_Chr3g0117661 | 54.475 | 257 | 116 | 1 | 23 | 278 | 1 | 257 | 2.04e-94 | 279 |
| Msa0722140 | MtrunA17_Chr3g0117691 | 52.529 | 257 | 121 | 1 | 23 | 278 | 1 | 257 | 8.66e-93 | 275 |
| Msa0722140 | MtrunA17_Chr2g0279581 | 51.777 | 197 | 92 | 2 | 74 | 270 | 89 | 282 | 2.45e-70 | 219 |
| Msa0722140 | MtrunA17_Chr5g0427341 | 50.254 | 197 | 96 | 2 | 74 | 270 | 94 | 288 | 3.01e-63 | 201 |
| Msa0722140 | MtrunA17_Chr3g0117671 | 72.727 | 44 | 12 | 0 | 105 | 148 | 1 | 44 | 6.08e-17 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722140 | AT5G14740.9 | 69.884 | 259 | 75 | 1 | 23 | 278 | 1 | 259 | 2.10e-135 | 383 |
| Msa0722140 | AT5G14740.8 | 69.884 | 259 | 75 | 1 | 23 | 278 | 1 | 259 | 2.10e-135 | 383 |
| Msa0722140 | AT5G14740.7 | 69.884 | 259 | 75 | 1 | 23 | 278 | 1 | 259 | 2.10e-135 | 383 |
| Msa0722140 | AT5G14740.2 | 69.884 | 259 | 75 | 1 | 23 | 278 | 1 | 259 | 2.10e-135 | 383 |
| Msa0722140 | AT5G14740.6 | 69.884 | 259 | 75 | 1 | 23 | 278 | 1 | 259 | 2.10e-135 | 383 |
| Msa0722140 | AT5G14740.1 | 66.909 | 275 | 87 | 2 | 8 | 278 | 57 | 331 | 2.99e-134 | 383 |
| Msa0722140 | AT1G70410.2 | 64.158 | 279 | 99 | 1 | 1 | 278 | 1 | 279 | 6.16e-132 | 375 |
| Msa0722140 | AT5G14740.4 | 66.545 | 275 | 87 | 3 | 8 | 278 | 57 | 330 | 1.10e-131 | 376 |
| Msa0722140 | AT5G14740.3 | 65.818 | 275 | 89 | 3 | 8 | 278 | 57 | 330 | 1.58e-130 | 373 |
| Msa0722140 | AT3G01500.4 | 66.023 | 259 | 85 | 1 | 23 | 278 | 1 | 259 | 1.94e-126 | 360 |
| Msa0722140 | AT3G01500.1 | 66.023 | 259 | 85 | 1 | 23 | 278 | 1 | 259 | 3.43e-126 | 360 |
| Msa0722140 | AT3G01500.3 | 65.900 | 261 | 86 | 1 | 21 | 278 | 76 | 336 | 5.20e-126 | 362 |
| Msa0722140 | AT3G01500.2 | 65.900 | 261 | 86 | 1 | 21 | 278 | 76 | 336 | 1.22e-125 | 362 |
| Msa0722140 | AT1G70410.3 | 65.759 | 257 | 87 | 1 | 23 | 278 | 1 | 257 | 9.32e-125 | 356 |
| Msa0722140 | AT1G70410.1 | 65.759 | 257 | 87 | 1 | 23 | 278 | 1 | 257 | 9.32e-125 | 356 |
| Msa0722140 | AT1G23730.2 | 62.646 | 257 | 95 | 1 | 23 | 278 | 1 | 257 | 1.36e-121 | 348 |
| Msa0722140 | AT1G23730.1 | 62.646 | 257 | 95 | 1 | 23 | 278 | 1 | 257 | 1.36e-121 | 348 |
| Msa0722140 | AT5G14740.5 | 68.780 | 205 | 61 | 1 | 23 | 224 | 73 | 277 | 1.27e-101 | 299 |
| Msa0722140 | AT4G33580.3 | 47.442 | 215 | 106 | 4 | 61 | 270 | 67 | 279 | 1.67e-63 | 202 |
| Msa0722140 | AT4G33580.1 | 47.442 | 215 | 106 | 4 | 61 | 270 | 67 | 279 | 1.67e-63 | 202 |
| Msa0722140 | AT4G33580.2 | 47.222 | 216 | 106 | 5 | 61 | 270 | 67 | 280 | 6.70e-63 | 200 |
| Msa0722140 | AT1G58180.2 | 38.956 | 249 | 149 | 2 | 21 | 269 | 28 | 273 | 1.01e-60 | 194 |
| Msa0722140 | AT1G58180.4 | 38.956 | 249 | 149 | 2 | 21 | 269 | 28 | 273 | 1.01e-60 | 194 |
| Msa0722140 | AT1G58180.7 | 41.441 | 222 | 129 | 1 | 48 | 269 | 2 | 222 | 9.44e-60 | 190 |
| Msa0722140 | AT1G58180.3 | 41.441 | 222 | 129 | 1 | 48 | 269 | 2 | 222 | 9.44e-60 | 190 |
| Msa0722140 | AT1G58180.6 | 41.441 | 222 | 129 | 1 | 48 | 269 | 2 | 222 | 9.44e-60 | 190 |
| Msa0722140 | AT1G58180.1 | 40.265 | 226 | 132 | 2 | 21 | 246 | 28 | 250 | 6.02e-56 | 181 |
| Msa0722140 | AT1G58180.5 | 40.196 | 204 | 119 | 2 | 21 | 224 | 28 | 228 | 7.30e-48 | 160 |
Find 119 sgRNAs with CRISPR-Local
Find 501 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCCCTCTGTATCCATTTA+AGG | 0.107949 | 5_1:+19338270 | Msa0722140:CDS |
| ACCTTGCTGGATTGCAAATT+TGG | 0.156469 | 5_1:-19337886 | None:intergenic |
| TTAAACCAGTGACTCGAATT+TGG | 0.220416 | 5_1:+19338741 | Msa0722140:three_prime_UTR |
| GCCCCAGCCATTTATCTCTT+TGG | 0.249549 | 5_1:-19329866 | None:intergenic |
| CTTGCGGTGGTCCCATCATC+TGG | 0.251001 | 5_1:-19336985 | None:intergenic |
| CACTTGACACTCCAACTTAA+AGG | 0.269238 | 5_1:-19338559 | None:intergenic |
| ATATGCGGTCTTACATTTAA+AGG | 0.280127 | 5_1:+19335830 | Msa0722140:CDS |
| GACCTTAGGGCTCTGGCCTT+TGG | 0.303340 | 5_1:-19334493 | None:intergenic |
| CGCCCCTGCTCCCGAATACT+TGG | 0.306885 | 5_1:-19335799 | None:intergenic |
| TTTGCCCCTCTGCATGAAAA+TGG | 0.312676 | 5_1:-19329098 | None:intergenic |
| AATTTAACCTTGGACCTTGC+TGG | 0.313505 | 5_1:-19337899 | None:intergenic |
| CAGCTGCTGTGGAGGCATAA+AGG | 0.320529 | 5_1:+19336948 | Msa0722140:CDS |
| AAACCATTTGTTCGAGTTGC+CGG | 0.321392 | 5_1:+19338689 | Msa0722140:three_prime_UTR |
| AGTGTGCCCTTCTCACATTT+TGG | 0.325244 | 5_1:+19334864 | Msa0722140:CDS |
| AGCTGCTGTGGAGGCATAAA+GGG | 0.327110 | 5_1:+19336949 | Msa0722140:CDS |
| ATGTAACAAACTATTCATTC+AGG | 0.355222 | 5_1:+19328902 | Msa0722140:five_prime_UTR |
| TAAAATATGATTGGAGAGAT+TGG | 0.355748 | 5_1:-19329132 | None:intergenic |
| GGTGTTGGAGAGACCTTAAA+TGG | 0.356865 | 5_1:-19338283 | None:intergenic |
| TTTCATTCCCTTGTATGTTT+AGG | 0.369114 | 5_1:+19329049 | Msa0722140:five_prime_UTR |
| GGAGCTGACGGCGGAGTTAG+AGG | 0.369439 | 5_1:+19333665 | Msa0722140:CDS |
| TATCATCAACATTAGTCCTT+TGG | 0.372973 | 5_1:+19338325 | Msa0722140:three_prime_UTR |
| CAGTGATTTCATTGAGCAAT+GGG | 0.388371 | 5_1:+19337862 | Msa0722140:intron |
| CCAACCGGGTGAAGCCTTTG+TGG | 0.395118 | 5_1:+19334891 | Msa0722140:CDS |
| CAATGTAACTAAAATATGAT+TGG | 0.422209 | 5_1:-19329141 | None:intergenic |
| GGGAATGAAAATGAATTTGA+AGG | 0.426102 | 5_1:-19329036 | None:intergenic |
| AAGAGGACCAAAGAGATAAA+TGG | 0.427405 | 5_1:+19329859 | Msa0722140:exon |
| GTGGAGAATATTGTAGTCAT+TGG | 0.437839 | 5_1:+19336922 | Msa0722140:CDS |
| GATAATGTTTATGCTACATT+GGG | 0.438170 | 5_1:+19328835 | None:intergenic |
| ATCCTCTCATCCGGGTTAAA+CGG | 0.445021 | 5_1:-19333702 | None:intergenic |
| TCTATCCAAATTCGAGTCAC+TGG | 0.445195 | 5_1:-19338746 | None:intergenic |
| GAAAAGTAAACCTTGTCATA+TGG | 0.446345 | 5_1:-19334940 | None:intergenic |
| CGAGTTGCCGGAGAATTTCA+AGG | 0.451054 | 5_1:+19338701 | Msa0722140:three_prime_UTR |
| CTGCAAGTTCACTTTGGTGT+TGG | 0.455447 | 5_1:-19338298 | None:intergenic |
| GAACCATGTTGGCGATGTTA+CGG | 0.461219 | 5_1:-19334915 | None:intergenic |
| ATCTTCTTCACCTTTACTTG+TGG | 0.465958 | 5_1:+19328869 | Msa0722140:five_prime_UTR |
| GTTAAACGGCTTTGAACCGT+TGG | 0.469755 | 5_1:-19333688 | None:intergenic |
| CCGGATCGGATCCTCTCATC+CGG | 0.470107 | 5_1:-19333711 | None:intergenic |
| CTCATGTCTATCCCAGATGA+TGG | 0.470494 | 5_1:+19336973 | Msa0722140:CDS |
| TGTGAGTTAATAGCAGCATT+GGG | 0.470532 | 5_1:-19328968 | None:intergenic |
| GAAGCTGTGAATGTATCTCT+TGG | 0.472140 | 5_1:+19338126 | Msa0722140:CDS |
| GGATAATGTTTATGCTACAT+TGG | 0.472933 | 5_1:+19328834 | None:intergenic |
| TATGCAAAGCACACATGAAA+AGG | 0.475075 | 5_1:-19329006 | None:intergenic |
| GCAAGTTCACCGTACAGCTC+AGG | 0.475420 | 5_1:-19334471 | None:intergenic |
| AACTAGCCCTTGAAATTCTC+CGG | 0.475518 | 5_1:-19338708 | None:intergenic |
| TGTTCTTAAGCCACAAGTAA+AGG | 0.476743 | 5_1:-19328879 | None:intergenic |
| AGTCTTGAAACTAACAAAAC+CGG | 0.477828 | 5_1:-19333730 | None:intergenic |
| ACAACACCATCTCTCACAAA+TGG | 0.478188 | 5_1:-19338165 | None:intergenic |
| TCTCCGGCAACTCGAACAAA+TGG | 0.478574 | 5_1:-19338692 | None:intergenic |
| AAATGGATACAGAGGGCAAA+AGG | 0.488532 | 5_1:-19338266 | None:intergenic |
| ATGTGAGTTAATAGCAGCAT+TGG | 0.490551 | 5_1:-19328969 | None:intergenic |
| CGGTTCAAAGCCGTTTAACC+CGG | 0.492215 | 5_1:+19333692 | Msa0722140:CDS |
| AATGTATGTTTCTTTCTCGA+TGG | 0.492489 | 5_1:-19338379 | None:intergenic |
| CAGACCAAGTATTCGGGAGC+AGG | 0.494063 | 5_1:+19335795 | Msa0722140:intron |
| CTCGAATTTGGATAGAAAGC+AGG | 0.501144 | 5_1:+19338753 | Msa0722140:three_prime_UTR |
| TCCAGGGAGAAAGCTGAGCT+TGG | 0.505774 | 5_1:+19333618 | Msa0722140:intron |
| ATGTAAGACCGCATATTCAA+TGG | 0.508542 | 5_1:-19335823 | None:intergenic |
| AATAGCTGACCTTAGGGCTC+TGG | 0.511436 | 5_1:-19334500 | None:intergenic |
| ACTTGTTTCTAATTTAACCT+TGG | 0.514008 | 5_1:-19337909 | None:intergenic |
| AAGAAAACCCTTGCTTTGAA+AGG | 0.517445 | 5_1:+19338189 | Msa0722140:CDS |
| AAGCTGTGAATGTATCTCTT+GGG | 0.518223 | 5_1:+19338127 | Msa0722140:CDS |
| TATATACTGCAAGTTCACTT+TGG | 0.518243 | 5_1:-19338304 | None:intergenic |
| GACCAAAGAGATAAATGGCT+GGG | 0.523819 | 5_1:+19329864 | Msa0722140:exon |
| CGTCAGCTCCTTGATCTTCA+CGG | 0.527964 | 5_1:-19333652 | None:intergenic |
| ACAGTGATTTCATTGAGCAA+TGG | 0.531537 | 5_1:+19337861 | Msa0722140:intron |
| ATGTGCTCCTTTCAAAGCAA+GGG | 0.535168 | 5_1:-19338196 | None:intergenic |
| CATCGCCGCCGTGAAGATCA+AGG | 0.541374 | 5_1:+19333644 | Msa0722140:CDS |
| AATGTTTATGCTACATTGGG+AGG | 0.541756 | 5_1:+19328838 | None:intergenic |
| AGACCAAGTATTCGGGAGCA+GGG | 0.549744 | 5_1:+19335796 | Msa0722140:intron |
| CAAGTATTCGGGAGCAGGGG+CGG | 0.551194 | 5_1:+19335800 | Msa0722140:CDS |
| GCAGTGCACAAACTGTGAAA+AGG | 0.551365 | 5_1:+19337949 | Msa0722140:CDS |
| TAGCACATAGACCTTTAAGT+TGG | 0.553212 | 5_1:+19338548 | Msa0722140:three_prime_UTR |
| ACTTATCCATTTGTGAGAGA+TGG | 0.556933 | 5_1:+19338159 | Msa0722140:CDS |
| TTGCGGTGGTCCCATCATCT+GGG | 0.562712 | 5_1:-19336984 | None:intergenic |
| AATGTGCTCCTTTCAAAGCA+AGG | 0.563009 | 5_1:-19338197 | None:intergenic |
| AATCAGAAGGAAGACATGGC+TGG | 0.564330 | 5_1:+19333378 | Msa0722140:intron |
| CCGGATGAGAGGATCCGATC+CGG | 0.568309 | 5_1:+19333711 | Msa0722140:CDS |
| TGGAAATCCAAAATGTGAGA+AGG | 0.571528 | 5_1:-19334871 | None:intergenic |
| GGACCAAAGAGATAAATGGC+TGG | 0.573609 | 5_1:+19329863 | Msa0722140:exon |
| GTCATTGGACACAGCTGCTG+TGG | 0.574698 | 5_1:+19336937 | Msa0722140:CDS |
| GGAATGAAAATGAATTTGAA+GGG | 0.575219 | 5_1:-19329035 | None:intergenic |
| TCCAAATTTGCAATCCAGCA+AGG | 0.577092 | 5_1:+19337885 | Msa0722140:CDS |
| CCACAAAGGCTTCACCCGGT+TGG | 0.578743 | 5_1:-19334891 | None:intergenic |
| ATTGGACACAGCTGCTGTGG+AGG | 0.579655 | 5_1:+19336940 | Msa0722140:CDS |
| GGAAATCCAAAATGTGAGAA+GGG | 0.582778 | 5_1:-19334870 | None:intergenic |
| GTGAGTAAATATTCTCACAT+TGG | 0.583022 | 5_1:+19338581 | Msa0722140:three_prime_UTR |
| AAATGCAAAGCAGGGTGAAG+AGG | 0.585160 | 5_1:+19329842 | Msa0722140:intron |
| TGTGTGTGCCTAAACATACA+AGG | 0.588685 | 5_1:-19329057 | None:intergenic |
| CGGACCACAAAGGCTTCACC+CGG | 0.592537 | 5_1:-19334895 | None:intergenic |
| TGCCAAAGGCCAGAGCCCTA+AGG | 0.593445 | 5_1:+19334491 | Msa0722140:CDS |
| TCATGTCTATCCCAGATGAT+GGG | 0.593762 | 5_1:+19336974 | Msa0722140:CDS |
| TTGCAATCCAGCAAGGTCCA+AGG | 0.594272 | 5_1:+19337892 | Msa0722140:CDS |
| GAGTTGCCGGAGAATTTCAA+GGG | 0.595562 | 5_1:+19338702 | Msa0722140:three_prime_UTR |
| AGGAAGAATCCTGAGCTGTA+CGG | 0.595793 | 5_1:+19334462 | Msa0722140:intron |
| AAGTAAACCTTGTCATATGG+TGG | 0.601200 | 5_1:-19334937 | None:intergenic |
| AGCCGTTTAACCCGGATGAG+AGG | 0.610912 | 5_1:+19333700 | Msa0722140:CDS |
| CATGGTTCCACCATATGACA+AGG | 0.613750 | 5_1:+19334930 | Msa0722140:CDS |
| GACCAAGTATTCGGGAGCAG+GGG | 0.614912 | 5_1:+19335797 | Msa0722140:intron |
| CATGGCTGGAGAAACATTCG+AGG | 0.615024 | 5_1:+19333392 | Msa0722140:CDS |
| CGGATCGGATCCTCTCATCC+GGG | 0.617375 | 5_1:-19333710 | None:intergenic |
| GTCATATGGTGGAACCATGT+TGG | 0.618619 | 5_1:-19334926 | None:intergenic |
| TTGCACAAGCAAGATTGTCT+CGG | 0.626170 | 5_1:+19329913 | Msa0722140:CDS |
| GGTCCGTAACATCGCCAACA+TGG | 0.627271 | 5_1:+19334912 | Msa0722140:CDS |
| ACCAAAGAGATAAATGGCTG+GGG | 0.628077 | 5_1:+19329865 | Msa0722140:exon |
| TGAAACTAACAAAACCGGAT+CGG | 0.630831 | 5_1:-19333725 | None:intergenic |
| CAGATGATGGGACCACCGCA+AGG | 0.633320 | 5_1:+19336986 | Msa0722140:CDS |
| CCGACAAAATACTCTTCCAA+AGG | 0.637110 | 5_1:-19338341 | None:intergenic |
| AGGGGCGGCCATTGAATATG+CGG | 0.637261 | 5_1:+19335815 | Msa0722140:CDS |
| ATGAAATCAGAAGGAAGACA+TGG | 0.641190 | 5_1:+19333374 | Msa0722140:intron |
| GAGACCTTAAATGGATACAG+AGG | 0.644330 | 5_1:-19338274 | None:intergenic |
| CTGTACGGTGAACTTGCCAA+AGG | 0.647222 | 5_1:+19334477 | Msa0722140:CDS |
| CAATAAAACCTACCTTGCGG+TGG | 0.657903 | 5_1:-19336998 | None:intergenic |
| CGTGAAGATCAAGGAGCTGA+CGG | 0.657927 | 5_1:+19333653 | Msa0722140:CDS |
| ACGGCGGAGTTAGAGGCCAA+CGG | 0.658529 | 5_1:+19333672 | Msa0722140:CDS |
| GCTGCTGTGGAGGCATAAAG+GGG | 0.658582 | 5_1:+19336950 | Msa0722140:CDS |
| GGCGATGTTACGGACCACAA+AGG | 0.665172 | 5_1:-19334905 | None:intergenic |
| AGACCTTAAATGGATACAGA+GGG | 0.665185 | 5_1:-19338273 | None:intergenic |
| GTGTGTGCCTAAACATACAA+GGG | 0.684916 | 5_1:-19329056 | None:intergenic |
| GAAGATCAAGGAGCTGACGG+CGG | 0.707015 | 5_1:+19333656 | Msa0722140:CDS |
| CAGCTCCTTGATCTTCACGG+CGG | 0.827966 | 5_1:-19333649 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATTATTATTATTATA+TGG | + | chr5_1:19335908-19335927 | Msa0722140:intron | 0.0% |
| !! | AAAAAAAAATAATAATAGAG+TGG | - | chr5_1:19330435-19330454 | None:intergenic | 10.0% |
| !! | AAAATTATAAAAACAAAAAG+GGG | - | chr5_1:19330847-19330866 | None:intergenic | 10.0% |
| !! | CAAAATTATAAAAACAAAAA+GGG | - | chr5_1:19330848-19330867 | None:intergenic | 10.0% |
| !!! | CTTTTTGTTTTTATAATTTT+GGG | + | chr5_1:19330847-19330866 | Msa0722140:intron | 10.0% |
| !! | GTGTATATTAATTTAATTAA+TGG | + | chr5_1:19330967-19330986 | Msa0722140:intron | 10.0% |
| !!! | TAATTTTATGAAAAATTATC+TGG | + | chr5_1:19331384-19331403 | Msa0722140:intron | 10.0% |
| !! | TATATATCTATATATATACA+CGG | - | chr5_1:19331438-19331457 | None:intergenic | 10.0% |
| !!! | TTAATCTTTTTATATATTTG+GGG | - | chr5_1:19331902-19331921 | None:intergenic | 10.0% |
| !! | ATATATTCTTTACAAAATAA+AGG | - | chr5_1:19332258-19332277 | None:intergenic | 10.0% |
| !! | TATGTTTATCATTTAAAAAA+AGG | + | chr5_1:19332372-19332391 | Msa0722140:intron | 10.0% |
| !!! | TAAATATATTACACTTTTAA+AGG | - | chr5_1:19335021-19335040 | None:intergenic | 10.0% |
| !! | ATAATATAAGATAAAGTATA+TGG | - | chr5_1:19335895-19335914 | None:intergenic | 10.0% |
| !! | TTATTATTATTATTATATGG+TGG | + | chr5_1:19335911-19335930 | Msa0722140:intron | 10.0% |
| !! | TATTATTATTATTATATGGT+GGG | + | chr5_1:19335912-19335931 | Msa0722140:intron | 10.0% |
| !! | TCACAATTAAATTATATTAA+TGG | - | chr5_1:19337233-19337252 | None:intergenic | 10.0% |
| !!! | ATATGATTCTTTTTTTATTA+AGG | + | chr5_1:19337465-19337484 | Msa0722140:intron | 10.0% |
| !! | AAAAAAAATCTTAAATTTGT+TGG | + | chr5_1:19338046-19338065 | Msa0722140:intron | 10.0% |
| !!! | CAAAATACTTATTTTATTAG+TGG | + | chr5_1:19329542-19329561 | Msa0722140:intron | 15.0% |
| !! | AATTATTTACATCAAAATGT+TGG | - | chr5_1:19329618-19329637 | None:intergenic | 15.0% |
| !!! | TAAATAGAACCAAATAATTT+TGG | - | chr5_1:19329794-19329813 | None:intergenic | 15.0% |
| !!! | AGAAGAATGATTATTTATTT+TGG | - | chr5_1:19330785-19330804 | None:intergenic | 15.0% |
| !! | AAATTATAAAAACAAAAAGG+GGG | - | chr5_1:19330846-19330865 | None:intergenic | 15.0% |
| !! | CCAAAATTATAAAAACAAAA+AGG | - | chr5_1:19330849-19330868 | None:intergenic | 15.0% |
| !!! | CCTTTTTGTTTTTATAATTT+TGG | + | chr5_1:19330846-19330865 | Msa0722140:intron | 15.0% |
| !!! | TATTTTTGACACAATAATAT+AGG | - | chr5_1:19331026-19331045 | None:intergenic | 15.0% |
| !!! | ATACGTTTTTTTTTAAAAGA+TGG | + | chr5_1:19331309-19331328 | Msa0722140:intron | 15.0% |
| !!! | CACATTATTTTTATTTTAGT+TGG | + | chr5_1:19331591-19331610 | Msa0722140:intron | 15.0% |
| !!! | TAGGTAATTTTTTTTTTAGT+AGG | + | chr5_1:19331638-19331657 | Msa0722140:intron | 15.0% |
| !!! | TAATAGCTTTTTATCTAATA+AGG | - | chr5_1:19331685-19331704 | None:intergenic | 15.0% |
| !! | ATTAAATAATTAACGTAAAG+TGG | + | chr5_1:19331917-19331936 | Msa0722140:intron | 15.0% |
| !! | CATTTAAAAGAAATTGAAAT+TGG | - | chr5_1:19332018-19332037 | None:intergenic | 15.0% |
| !! | TTTAAAAACAAAAAACTTAG+TGG | - | chr5_1:19332586-19332605 | None:intergenic | 15.0% |
| !! | GATATATTTGGTTAAAAAAT+TGG | - | chr5_1:19334110-19334129 | None:intergenic | 15.0% |
| !! | ATAGGTATATTATATATCAA+AGG | - | chr5_1:19334683-19334702 | None:intergenic | 15.0% |
| !!! | TAGTAGATATTTTTCATTAT+AGG | - | chr5_1:19334701-19334720 | None:intergenic | 15.0% |
| !!! | TTATGATAATTTTAAGTCAA+TGG | - | chr5_1:19334747-19334766 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr5_1:19335376-19335395 | None:intergenic | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | chr5_1:19335440-19335459 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr5_1:19335441-19335460 | None:intergenic | 15.0% |
| !!! | AAACTTAAAACTGTTTTATT+AGG | - | chr5_1:19335561-19335580 | None:intergenic | 15.0% |
| !!! | AGTAAAATAACATAACATTT+TGG | + | chr5_1:19336100-19336119 | Msa0722140:intron | 15.0% |
| !! | TAATTTAACCCTTAAAAAAA+TGG | - | chr5_1:19336494-19336513 | None:intergenic | 15.0% |
| !!! | ATTTATATAAACACATTTTC+AGG | - | chr5_1:19336681-19336700 | None:intergenic | 15.0% |
| !! | ATAAAAAAGTAAAATGCTAT+TGG | - | chr5_1:19336873-19336892 | None:intergenic | 15.0% |
| !!! | GCATTTTACTTTTTTATTTT+TGG | + | chr5_1:19336876-19336895 | Msa0722140:intron | 15.0% |
| !! | CAATTAAATTATATTAATGG+TGG | - | chr5_1:19337230-19337249 | None:intergenic | 15.0% |
| !! | TAAAATGAATAAGTTAAGTA+GGG | - | chr5_1:19338000-19338019 | None:intergenic | 15.0% |
| !! | ATAAAATGAATAAGTTAAGT+AGG | - | chr5_1:19338001-19338020 | None:intergenic | 15.0% |
| !! | CAATGTAACTAAAATATGAT+TGG | - | chr5_1:19329144-19329163 | None:intergenic | 20.0% |
| !!! | CAATCATATTTTAGTTACAT+TGG | + | chr5_1:19329142-19329161 | Msa0722140:five_prime_UTR | 20.0% |
| !! | GTTTATTAACAAATCGTTTA+AGG | - | chr5_1:19329421-19329440 | None:intergenic | 20.0% |
| !!! | ATGAAAAAAGTATTCATATG+GGG | - | chr5_1:19329663-19329682 | None:intergenic | 20.0% |
| !!! | GATGAAAAAAGTATTCATAT+GGG | - | chr5_1:19329664-19329683 | None:intergenic | 20.0% |
| !!! | AAATTGCTATGTATTTTGTT+GGG | - | chr5_1:19329765-19329784 | None:intergenic | 20.0% |
| !! | TTTCCATAACCAAAATTATT+TGG | + | chr5_1:19329782-19329801 | Msa0722140:intron | 20.0% |
| !!! | CATTTGTCGATTAAAAATTT+AGG | - | chr5_1:19330123-19330142 | None:intergenic | 20.0% |
| !! | AAAAATAATAATAGAGTGGA+GGG | - | chr5_1:19330431-19330450 | None:intergenic | 20.0% |
| !! | AAAAAATAATAATAGAGTGG+AGG | - | chr5_1:19330432-19330451 | None:intergenic | 20.0% |
| !!! | TGTAGTGTTCATAATTATTT+TGG | + | chr5_1:19331345-19331364 | Msa0722140:intron | 20.0% |
| !!! | CTAAGATAGTCAAAATTTTA+TGG | - | chr5_1:19331563-19331582 | None:intergenic | 20.0% |
| !!! | TTTTTTGTAGTGATTTTAGT+AGG | + | chr5_1:19331619-19331638 | Msa0722140:intron | 20.0% |
| !! | ATTGATTATTGAGTCAAAAA+GGG | - | chr5_1:19331798-19331817 | None:intergenic | 20.0% |
| !!! | TATTGATTATTGAGTCAAAA+AGG | - | chr5_1:19331799-19331818 | None:intergenic | 20.0% |
| !!! | AATGACATGCTAATTTTTTT+AGG | + | chr5_1:19332034-19332053 | Msa0722140:intron | 20.0% |
| !! | ACTAACATAACAATTAACAT+AGG | - | chr5_1:19332124-19332143 | None:intergenic | 20.0% |
| !!! | TTCAAAAAAAAAAGTTGGTA+TGG | - | chr5_1:19332398-19332417 | None:intergenic | 20.0% |
| !! | TCAAAGTGAAAAAAAAAAGT+CGG | + | chr5_1:19332633-19332652 | Msa0722140:intron | 20.0% |
| !!! | TTTTTTTGTATGAAATCAGA+AGG | + | chr5_1:19333365-19333384 | Msa0722140:intron | 20.0% |
| !!! | CAACTGTTAATTTTAATTCA+AGG | - | chr5_1:19333888-19333907 | None:intergenic | 20.0% |
| !! | GTCAACAAAATAGATATATT+TGG | - | chr5_1:19334122-19334141 | None:intergenic | 20.0% |
| !!! | ACATAAAAATTTGCTTAACT+TGG | + | chr5_1:19334385-19334404 | Msa0722140:intron | 20.0% |
| !! | TTGAATTTATTGAATTCACA+TGG | + | chr5_1:19335122-19335141 | Msa0722140:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr5_1:19335306-19335325 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | chr5_1:19335439-19335458 | None:intergenic | 20.0% |
| !! | TATCAAAGATAAAATGATGT+TGG | - | chr5_1:19335528-19335547 | None:intergenic | 20.0% |
| !!! | TCAAAGTTATATCTTCATTT+TGG | + | chr5_1:19335714-19335733 | Msa0722140:intron | 20.0% |
| !! | TATTCTATTGCATTATTTGT+TGG | + | chr5_1:19335986-19336005 | Msa0722140:intron | 20.0% |
| !! | ATTCTATTGCATTATTTGTT+GGG | + | chr5_1:19335987-19336006 | Msa0722140:intron | 20.0% |
| !!! | TCAATATGTGTATCTTTTAT+AGG | + | chr5_1:19336248-19336267 | Msa0722140:intron | 20.0% |
| !!! | GTATCTTTTATAGGTTTTTA+TGG | + | chr5_1:19336257-19336276 | Msa0722140:intron | 20.0% |
| !! | TTCTACTTCTTAAGTTTATA+TGG | + | chr5_1:19336348-19336367 | Msa0722140:intron | 20.0% |
| !!! | AGACAAGTAAATAAACATTT+TGG | - | chr5_1:19336406-19336425 | None:intergenic | 20.0% |
| !! | TTCTAAATATTATGCAATAC+AGG | + | chr5_1:19336900-19336919 | Msa0722140:intron | 20.0% |
| !!! | TTTTATTGTATTATGTTCCT+TGG | + | chr5_1:19337013-19337032 | Msa0722140:intron | 20.0% |
| !!! | AATTTGAGTTATCATCTTTT+AGG | - | chr5_1:19337073-19337092 | None:intergenic | 20.0% |
| !!! | CTCTTGGATTTTTTTTTTAT+GGG | + | chr5_1:19337309-19337328 | Msa0722140:intron | 20.0% |
| !!! | TTTTTTCTCTAATTTGTTCT+TGG | - | chr5_1:19337341-19337360 | None:intergenic | 20.0% |
| !!! | AATTTCATTTTAAGGATATG+TGG | + | chr5_1:19338508-19338527 | Msa0722140:three_prime_UTR | 20.0% |
| !!! | ATTTCATTTTAAGGATATGT+GGG | + | chr5_1:19338509-19338528 | Msa0722140:three_prime_UTR | 20.0% |
| ! | ATGTAACAAACTATTCATTC+AGG | + | chr5_1:19328902-19328921 | Msa0722140:five_prime_UTR | 25.0% |
| ! | GGAATGAAAATGAATTTGAA+GGG | - | chr5_1:19329038-19329057 | None:intergenic | 25.0% |
| ! | TAAAATATGATTGGAGAGAT+TGG | - | chr5_1:19329135-19329154 | None:intergenic | 25.0% |
| ! | ACAAGAAAATTGTAAAGACA+TGG | - | chr5_1:19329210-19329229 | None:intergenic | 25.0% |
| !!! | CTTTACAATTTTCTTGTTTC+TGG | + | chr5_1:19329213-19329232 | Msa0722140:intron | 25.0% |
| !! | TAACTAGAGAAAATGCATTT+TGG | + | chr5_1:19329297-19329316 | Msa0722140:intron | 25.0% |
| !! | AACTAGAGAAAATGCATTTT+GGG | + | chr5_1:19329298-19329317 | Msa0722140:intron | 25.0% |
| ! | ATGTCTTAAGACAATTTGTA+AGG | - | chr5_1:19329515-19329534 | None:intergenic | 25.0% |
| ! | TACATCAAAATGTTGGAAAA+TGG | - | chr5_1:19329611-19329630 | None:intergenic | 25.0% |
| !!! | TGAAAAAAGTATTCATATGG+GGG | - | chr5_1:19329662-19329681 | None:intergenic | 25.0% |
| !!! | GGATGAAAAAAGTATTCATA+TGG | - | chr5_1:19329665-19329684 | None:intergenic | 25.0% |
| ! | AATTTACTATCAAAAGCAAG+CGG | - | chr5_1:19329686-19329705 | None:intergenic | 25.0% |
| !!! | AACGTTTCTTATTCTAAAGT+AGG | + | chr5_1:19329706-19329725 | Msa0722140:intron | 25.0% |
| !! | GAAATTGCTATGTATTTTGT+TGG | - | chr5_1:19329766-19329785 | None:intergenic | 25.0% |
| !!! | GAACCAAATAATTTTGGTTA+TGG | - | chr5_1:19329788-19329807 | None:intergenic | 25.0% |
| ! | CAATTCAATGTGTTAACAAT+GGG | - | chr5_1:19330257-19330276 | None:intergenic | 25.0% |
| ! | TCAATTCAATGTGTTAACAA+TGG | - | chr5_1:19330258-19330277 | None:intergenic | 25.0% |
| ! | GATTAACAACTTGAAGATAA+GGG | - | chr5_1:19330356-19330375 | None:intergenic | 25.0% |
| ! | AGATTAACAACTTGAAGATA+AGG | - | chr5_1:19330357-19330376 | None:intergenic | 25.0% |
| ! | TGCATTATTTCCTATGTAAT+GGG | - | chr5_1:19330406-19330425 | None:intergenic | 25.0% |
| !! | TAAAAGACATTTTCAATGCA+AGG | - | chr5_1:19330604-19330623 | None:intergenic | 25.0% |
| !! | GCATTGAAAATGTCTTTTAT+TGG | + | chr5_1:19330605-19330624 | Msa0722140:intron | 25.0% |
| !! | AAATGTCTTTTATTGGATTG+TGG | + | chr5_1:19330612-19330631 | Msa0722140:intron | 25.0% |
| !!! | TGTTTTTCTCATTTTTGTTG+AGG | + | chr5_1:19330716-19330735 | Msa0722140:intron | 25.0% |
| ! | TAATCAATAATTTACTGCCA+TGG | + | chr5_1:19331810-19331829 | Msa0722140:intron | 25.0% |
| ! | ACTCAAATGATTAATCACTA+CGG | - | chr5_1:19332294-19332313 | None:intergenic | 25.0% |
| ! | TCGCTTTATCATCATAATAA+TGG | - | chr5_1:19332341-19332360 | None:intergenic | 25.0% |
| ! | GCTTCTTCAAAAAAAAAAGT+TGG | - | chr5_1:19332403-19332422 | None:intergenic | 25.0% |
| !!! | TCTTTTAGTTGTTTAACTTG+TGG | - | chr5_1:19332727-19332746 | None:intergenic | 25.0% |
| !!! | TATATATATGAGTTTTGACG+CGG | - | chr5_1:19332944-19332963 | None:intergenic | 25.0% |
| !!! | ATTTGATTTGAATCTGGTAT+TGG | - | chr5_1:19333072-19333091 | None:intergenic | 25.0% |
| !!! | AGTATGATTTGATTTGAATC+TGG | - | chr5_1:19333078-19333097 | None:intergenic | 25.0% |
| ! | TACAACAAAATCATGTGATA+CGG | - | chr5_1:19333311-19333330 | None:intergenic | 25.0% |
| !!! | TCAATTTTCATTTGATAACG+CGG | + | chr5_1:19333518-19333537 | Msa0722140:intron | 25.0% |
| !! | TGTTATTGTTATTGTCATGT+GGG | + | chr5_1:19333554-19333573 | Msa0722140:intron | 25.0% |
| !! | GGATCATGTTTTACTTTATT+TGG | + | chr5_1:19333799-19333818 | Msa0722140:intron | 25.0% |
| !! | TTTATTTGGTTTCGTACTTA+CGG | + | chr5_1:19333813-19333832 | Msa0722140:intron | 25.0% |
| ! | TCATAAGTAACTATTCCAAT+TGG | + | chr5_1:19333854-19333873 | Msa0722140:intron | 25.0% |
| !! | TTCAAGGAATTTTATCCAAT+TGG | - | chr5_1:19333872-19333891 | None:intergenic | 25.0% |
| ! | TGTATTCATGAATTAGTAGT+AGG | - | chr5_1:19333912-19333931 | None:intergenic | 25.0% |
| !! | TATTTTATGATCAATGCATC+TGG | + | chr5_1:19334655-19334674 | Msa0722140:intron | 25.0% |
| !! | ATTTTATGATCAATGCATCT+GGG | + | chr5_1:19334656-19334675 | Msa0722140:intron | 25.0% |
| !! | AGTATAAAGTCGTTCTTTTA+TGG | + | chr5_1:19334771-19334790 | Msa0722140:intron | 25.0% |
| !!! | GACTTTTTCTTAATGCAATA+AGG | - | chr5_1:19334976-19334995 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr5_1:19335307-19335326 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr5_1:19335328-19335347 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr5_1:19335329-19335348 | None:intergenic | 25.0% |
| ! | TGTATAAATAAAGGGGAAAA+TGG | - | chr5_1:19335432-19335451 | None:intergenic | 25.0% |
| ! | CAAAGTAGGTCAATTAAATT+GGG | + | chr5_1:19335476-19335495 | Msa0722140:intron | 25.0% |
| ! | TCATATCTTATCGTGTATTA+CGG | + | chr5_1:19336030-19336049 | Msa0722140:intron | 25.0% |
| ! | TACTTGTCTTATGTTTGATT+CGG | + | chr5_1:19336417-19336436 | Msa0722140:intron | 25.0% |
| !!! | TCTACAAGTCCATTTTTTTA+AGG | + | chr5_1:19336482-19336501 | Msa0722140:intron | 25.0% |
| !!! | CTACAAGTCCATTTTTTTAA+GGG | + | chr5_1:19336483-19336502 | Msa0722140:intron | 25.0% |
| ! | ACTCAACTTAAATTATACCA+TGG | + | chr5_1:19336515-19336534 | Msa0722140:intron | 25.0% |
| ! | GTCGATCATTATAAAATGAA+CGG | - | chr5_1:19336718-19336737 | None:intergenic | 25.0% |
| ! | AAATTCTCAAGGTTGTAAAT+GGG | - | chr5_1:19336791-19336810 | None:intergenic | 25.0% |
| ! | TCAATTTCTTCAAATTCTCA+AGG | - | chr5_1:19336802-19336821 | None:intergenic | 25.0% |
| ! | TAAATATTATGCAATACAGG+TGG | + | chr5_1:19336903-19336922 | Msa0722140:intron | 25.0% |
| ! | TCTTTATAAGAGATATTCCA+AGG | - | chr5_1:19337033-19337052 | None:intergenic | 25.0% |
| ! | TGGAATATCTCTTATAAAGA+AGG | + | chr5_1:19337033-19337052 | Msa0722140:intron | 25.0% |
| ! | TAAACATTTCAACTATGAGA+TGG | - | chr5_1:19337187-19337206 | None:intergenic | 25.0% |
| ! | CCATAAAAAAAAAATCCAAG+AGG | - | chr5_1:19337311-19337330 | None:intergenic | 25.0% |
| !!! | CCTCTTGGATTTTTTTTTTA+TGG | + | chr5_1:19337308-19337327 | Msa0722140:intron | 25.0% |
| ! | CAATAACTAGTTATTAAGTG+AGG | - | chr5_1:19337514-19337533 | None:intergenic | 25.0% |
| ! | CTCACTTAATAACTAGTTAT+TGG | + | chr5_1:19337512-19337531 | Msa0722140:intron | 25.0% |
| !! | TAGTTTTTGCAGAATCATAT+TGG | + | chr5_1:19337705-19337724 | Msa0722140:intron | 25.0% |
| ! | TAGTGAATGTGTTAGAATTA+CGG | - | chr5_1:19337735-19337754 | None:intergenic | 25.0% |
| ! | TTCACTATGATACAAAACTT+AGG | + | chr5_1:19337748-19337767 | Msa0722140:intron | 25.0% |
| !!! | GAGTCATTTTTCTTATGTTA+CGG | - | chr5_1:19337783-19337802 | None:intergenic | 25.0% |
| !! | AAATGACTCACAATTTTTCT+TGG | + | chr5_1:19337794-19337813 | Msa0722140:intron | 25.0% |
| !!! | ACTTGTTTCTAATTTAACCT+TGG | - | chr5_1:19337912-19337931 | None:intergenic | 25.0% |
| !! | GCACATTACAATTTTGTTAA+TGG | + | chr5_1:19338213-19338232 | Msa0722140:CDS | 25.0% |
| GGGAATGAAAATGAATTTGA+AGG | - | chr5_1:19329039-19329058 | None:intergenic | 30.0% | |
| TTTCATTCCCTTGTATGTTT+AGG | + | chr5_1:19329049-19329068 | Msa0722140:five_prime_UTR | 30.0% | |
| !!! | TACAATTTTCTTGTTTCTGG+TGG | + | chr5_1:19329216-19329235 | Msa0722140:intron | 30.0% |
| TAAACATTAGAGGAGACATT+AGG | - | chr5_1:19329373-19329392 | None:intergenic | 30.0% | |
| TGTCGTCAAATAAACATTAG+AGG | - | chr5_1:19329383-19329402 | None:intergenic | 30.0% | |
| AATGAAACACCAACAGTAAA+TGG | + | chr5_1:19329573-19329592 | Msa0722140:intron | 30.0% | |
| ATGAAACACCAACAGTAAAT+GGG | + | chr5_1:19329574-19329593 | Msa0722140:intron | 30.0% | |
| CCATCTTAGCATAAAAAAAG+AGG | - | chr5_1:19330001-19330020 | None:intergenic | 30.0% | |
| !!! | CCTCTTTTTTTATGCTAAGA+TGG | + | chr5_1:19329998-19330017 | Msa0722140:intron | 30.0% |
| AAATATACCTACTCTTGGTA+AGG | - | chr5_1:19330312-19330331 | None:intergenic | 30.0% | |
| GTGCATTATTTCCTATGTAA+TGG | - | chr5_1:19330407-19330426 | None:intergenic | 30.0% | |
| AGAAAAAACAAAGTGGAATC+TGG | - | chr5_1:19330933-19330952 | None:intergenic | 30.0% | |
| ACTAGCTAGAAAAAACAAAG+TGG | - | chr5_1:19330940-19330959 | None:intergenic | 30.0% | |
| TTGTGTCAAAAATACCTCTA+TGG | + | chr5_1:19331032-19331051 | Msa0722140:intron | 30.0% | |
| ! | ATTCTTAAACACCTTCGTTT+TGG | - | chr5_1:19331059-19331078 | None:intergenic | 30.0% |
| GGTCAAAAGTGATAAATAAC+TGG | - | chr5_1:19331542-19331561 | None:intergenic | 30.0% | |
| ! | AAGAGATTTCTCTTTTTCCA+TGG | - | chr5_1:19331830-19331849 | None:intergenic | 30.0% |
| ! | ATATATTTGGGGTCAAATCT+TGG | - | chr5_1:19331891-19331910 | None:intergenic | 30.0% |
| AAAAACTTAGTGGTACAAGT+TGG | - | chr5_1:19332576-19332595 | None:intergenic | 30.0% | |
| ! | TGATTTGTAACGTGAATTGT+AGG | - | chr5_1:19333113-19333132 | None:intergenic | 30.0% |
| GATACGGTAACATAAATGAA+CGG | - | chr5_1:19333295-19333314 | None:intergenic | 30.0% | |
| ! | TTTTTCTTACTTGAGAAGTC+TGG | - | chr5_1:19333436-19333455 | None:intergenic | 30.0% |
| AAAACTCTCTCTCTTGATTT+CGG | + | chr5_1:19333452-19333471 | Msa0722140:intron | 30.0% | |
| ! | CTGTTATTGTTATTGTCATG+TGG | + | chr5_1:19333553-19333572 | Msa0722140:intron | 30.0% |
| AGTCTTGAAACTAACAAAAC+CGG | - | chr5_1:19333733-19333752 | None:intergenic | 30.0% | |
| ! | AAAATTTTCCCCTCAACTTA+CGG | - | chr5_1:19334356-19334375 | None:intergenic | 30.0% |
| AGTACATTTCACTGAGATAT+TGG | + | chr5_1:19334416-19334435 | Msa0722140:intron | 30.0% | |
| TAATAGAATAGCTGACCTTA+GGG | - | chr5_1:19334509-19334528 | None:intergenic | 30.0% | |
| GCTATTCTATTACTAGTACT+TGG | + | chr5_1:19334517-19334536 | Msa0722140:intron | 30.0% | |
| GTAATTAGTGTAAACGGAAA+TGG | - | chr5_1:19334544-19334563 | None:intergenic | 30.0% | |
| GAAAAGTAAACCTTGTCATA+TGG | - | chr5_1:19334943-19334962 | None:intergenic | 30.0% | |
| TTGAATTCACATGGTGTAAA+AGG | + | chr5_1:19335131-19335150 | Msa0722140:intron | 30.0% | |
| CCAATTTAATTGACCTACTT+TGG | - | chr5_1:19335478-19335497 | None:intergenic | 30.0% | |
| CCAAAGTAGGTCAATTAAAT+TGG | + | chr5_1:19335475-19335494 | Msa0722140:intron | 30.0% | |
| ATATGCGGTCTTACATTTAA+AGG | + | chr5_1:19335830-19335849 | Msa0722140:CDS | 30.0% | |
| GAATACTTAACAATGTCAGA+TGG | - | chr5_1:19335971-19335990 | None:intergenic | 30.0% | |
| CATATCTTATCGTGTATTAC+GGG | + | chr5_1:19336031-19336050 | Msa0722140:intron | 30.0% | |
| TTTGGTTATTGAAATCGTAG+TGG | + | chr5_1:19336118-19336137 | Msa0722140:intron | 30.0% | |
| CTACACTACATTAAATGTTG+TGG | - | chr5_1:19336196-19336215 | None:intergenic | 30.0% | |
| CACAACATTTAATGTAGTGT+AGG | + | chr5_1:19336194-19336213 | Msa0722140:intron | 30.0% | |
| TCTTATCATTGATCATGCTT+AGG | - | chr5_1:19336626-19336645 | None:intergenic | 30.0% | |
| GGGTCAATAAATTCTATATG+AGG | - | chr5_1:19336771-19336790 | None:intergenic | 30.0% | |
| CAAATTCTCAAGGTTGTAAA+TGG | - | chr5_1:19336792-19336811 | None:intergenic | 30.0% | |
| ATACAATAAAACCTACCTTG+CGG | - | chr5_1:19337004-19337023 | None:intergenic | 30.0% | |
| ATTTCAACTATGAGATGGAA+GGG | - | chr5_1:19337182-19337201 | None:intergenic | 30.0% | |
| ATAACATGATCTATCACTGT+TGG | + | chr5_1:19337268-19337287 | Msa0722140:intron | 30.0% | |
| ! | ATCACTGTTGGTTAATCAAA+AGG | + | chr5_1:19337280-19337299 | Msa0722140:intron | 30.0% |
| AATCAAAAGGAATAACCTCT+TGG | + | chr5_1:19337293-19337312 | Msa0722140:intron | 30.0% | |
| ! | CGTTGTCGTTTAACATTAAA+AGG | - | chr5_1:19337403-19337422 | None:intergenic | 30.0% |
| AGTTATTAAGTGAGGATTTG+AGG | - | chr5_1:19337506-19337525 | None:intergenic | 30.0% | |
| TAAGTTAAGTAGGGTTTGAT+TGG | - | chr5_1:19337991-19338010 | None:intergenic | 30.0% | |
| TATATACTGCAAGTTCACTT+TGG | - | chr5_1:19338307-19338326 | None:intergenic | 30.0% | |
| TATCATCAACATTAGTCCTT+TGG | + | chr5_1:19338325-19338344 | Msa0722140:three_prime_UTR | 30.0% | |
| !!! | AGTATTTTGTCGGTTCTAAT+TGG | + | chr5_1:19338351-19338370 | Msa0722140:three_prime_UTR | 30.0% |
| AATGTATGTTTCTTTCTCGA+TGG | - | chr5_1:19338382-19338401 | None:intergenic | 30.0% | |
| GTGAGTAAATATTCTCACAT+TGG | + | chr5_1:19338581-19338600 | Msa0722140:three_prime_UTR | 30.0% | |
| ATCTTCTTCACCTTTACTTG+TGG | + | chr5_1:19328869-19328888 | Msa0722140:five_prime_UTR | 35.0% | |
| TGTTCTTAAGCCACAAGTAA+AGG | - | chr5_1:19328882-19328901 | None:intergenic | 35.0% | |
| TGTGAGTTAATAGCAGCATT+GGG | - | chr5_1:19328971-19328990 | None:intergenic | 35.0% | |
| ATGTGAGTTAATAGCAGCAT+TGG | - | chr5_1:19328972-19328991 | None:intergenic | 35.0% | |
| TATGCAAAGCACACATGAAA+AGG | - | chr5_1:19329009-19329028 | None:intergenic | 35.0% | |
| TGGATCAAGCAGTAGATAAT+TGG | - | chr5_1:19329190-19329209 | None:intergenic | 35.0% | |
| ! | TACATATAAGTTGGACTTGG+AGG | - | chr5_1:19329732-19329751 | None:intergenic | 35.0% |
| ! | AGCTACATATAAGTTGGACT+TGG | - | chr5_1:19329735-19329754 | None:intergenic | 35.0% |
| CAACTTATATGTAGCTCCAA+GGG | + | chr5_1:19329739-19329758 | Msa0722140:intron | 35.0% | |
| ! | TTTTTCTGCAAATGCAAAGC+AGG | + | chr5_1:19329833-19329852 | Msa0722140:intron | 35.0% |
| ! | TTTTCTGCAAATGCAAAGCA+GGG | + | chr5_1:19329834-19329853 | Msa0722140:intron | 35.0% |
| AAGAGGACCAAAGAGATAAA+TGG | + | chr5_1:19329859-19329878 | Msa0722140:exon | 35.0% | |
| CTAAGATGGAGCAAAAGAAA+TGG | + | chr5_1:19330012-19330031 | Msa0722140:intron | 35.0% | |
| TGTGTTAACAATGGGTACTT+TGG | - | chr5_1:19330249-19330268 | None:intergenic | 35.0% | |
| TCACAATACATAGTCCTACA+AGG | + | chr5_1:19330280-19330299 | Msa0722140:intron | 35.0% | |
| GGACAAAATATACCTACTCT+TGG | - | chr5_1:19330317-19330336 | None:intergenic | 35.0% | |
| AAGGGAACACATAAAGCAAT+AGG | - | chr5_1:19330338-19330357 | None:intergenic | 35.0% | |
| ! | TTTCCTATGTAATGGGAAGA+TGG | - | chr5_1:19330399-19330418 | None:intergenic | 35.0% |
| ! | AAAAACAAAAAGGGGGTGTA+AGG | - | chr5_1:19330839-19330858 | None:intergenic | 35.0% |
| AAAACAAAGTGGAATCTGGT+GGG | - | chr5_1:19330929-19330948 | None:intergenic | 35.0% | |
| AAAAACAAAGTGGAATCTGG+TGG | - | chr5_1:19330930-19330949 | None:intergenic | 35.0% | |
| ! | TTCTTAAACACCTGCGTTTT+TGG | - | chr5_1:19331002-19331021 | None:intergenic | 35.0% |
| TATATACACGGTCAACAGTT+TGG | - | chr5_1:19331426-19331445 | None:intergenic | 35.0% | |
| ATTATTGAGTCAAAAAGGGC+AGG | - | chr5_1:19331794-19331813 | None:intergenic | 35.0% | |
| CTCAAATGAGTTCAACTACT+TGG | + | chr5_1:19332204-19332223 | Msa0722140:intron | 35.0% | |
| AGAATCTAGTCCACTCAAAT+TGG | + | chr5_1:19332452-19332471 | Msa0722140:intron | 35.0% | |
| ! | GTTTTTCTCTTGTGTGATAC+TGG | - | chr5_1:19332997-19333016 | None:intergenic | 35.0% |
| AAAACACACACCAAAAACCA+AGG | + | chr5_1:19333012-19333031 | Msa0722140:intron | 35.0% | |
| ATTATTTAGACGACGAACCT+TGG | - | chr5_1:19333032-19333051 | None:intergenic | 35.0% | |
| ATGAAATCAGAAGGAAGACA+TGG | + | chr5_1:19333374-19333393 | Msa0722140:intron | 35.0% | |
| AAATTGACGCAAAAAGACAG+TGG | - | chr5_1:19333505-19333524 | None:intergenic | 35.0% | |
| !!! | ATTTTCATTTGATAACGCGG+AGG | + | chr5_1:19333521-19333540 | Msa0722140:intron | 35.0% |
| TAACATTACACGGTTTGTGT+AGG | - | chr5_1:19333581-19333600 | None:intergenic | 35.0% | |
| CGGAAAACGTTAACATTACA+CGG | - | chr5_1:19333591-19333610 | None:intergenic | 35.0% | |
| TGAAACTAACAAAACCGGAT+CGG | - | chr5_1:19333728-19333747 | None:intergenic | 35.0% | |
| ! | TGATTTTACTGTGCGTGTTT+AGG | + | chr5_1:19333773-19333792 | Msa0722140:intron | 35.0% |
| ACATTTCACTGAGATATTGG+TGG | + | chr5_1:19334419-19334438 | Msa0722140:intron | 35.0% | |
| CATTTCACTGAGATATTGGT+GGG | + | chr5_1:19334420-19334439 | Msa0722140:intron | 35.0% | |
| GTAATAGAATAGCTGACCTT+AGG | - | chr5_1:19334510-19334529 | None:intergenic | 35.0% | |
| GAACGCGTAATTAGTGTAAA+CGG | - | chr5_1:19334550-19334569 | None:intergenic | 35.0% | |
| TCTCACTAACAGCATTATAG+TGG | + | chr5_1:19334618-19334637 | Msa0722140:intron | 35.0% | |
| TATAGTGCACATGCAGTTTA+TGG | + | chr5_1:19334819-19334838 | Msa0722140:intron | 35.0% | |
| GGAAATCCAAAATGTGAGAA+GGG | - | chr5_1:19334873-19334892 | None:intergenic | 35.0% | |
| TGGAAATCCAAAATGTGAGA+AGG | - | chr5_1:19334874-19334893 | None:intergenic | 35.0% | |
| ! | TCACATTTTGGATTTCCAAC+CGG | + | chr5_1:19334876-19334895 | Msa0722140:CDS | 35.0% |
| AAGTAAACCTTGTCATATGG+TGG | - | chr5_1:19334940-19334959 | None:intergenic | 35.0% | |
| TGAAGTGACTTCAAACATGT+AGG | - | chr5_1:19335165-19335184 | None:intergenic | 35.0% | |
| GTACAAAGAAGCAATGATGT+TGG | - | chr5_1:19335260-19335279 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr5_1:19335293-19335312 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr5_1:19335462-19335481 | Msa0722140:intron | 35.0% | |
| GTAGGTCAATTAAATTGGGA+CGG | + | chr5_1:19335480-19335499 | Msa0722140:intron | 35.0% | |
| CTGAATTGAAACACCAAAAC+AGG | - | chr5_1:19335744-19335763 | None:intergenic | 35.0% | |
| ATGTAAGACCGCATATTCAA+TGG | - | chr5_1:19335826-19335845 | None:intergenic | 35.0% | |
| AGTATATGGTGAAGAAAGAG+AGG | - | chr5_1:19335881-19335900 | None:intergenic | 35.0% | |
| !! | TTATTATATGGTGGGTCTCT+TGG | + | chr5_1:19335920-19335939 | Msa0722140:intron | 35.0% |
| TATGAAAATTGAGATGCCTG+TGG | - | chr5_1:19336015-19336034 | None:intergenic | 35.0% | |
| TGTTGTGGTGCAAAATTTGA+AGG | - | chr5_1:19336181-19336200 | None:intergenic | 35.0% | |
| !!! | GATGAACTTTTGACGGATTT+TGG | - | chr5_1:19336543-19336562 | None:intergenic | 35.0% |
| ! | GTGTCTTGATGAACTTTTGA+CGG | - | chr5_1:19336550-19336569 | None:intergenic | 35.0% |
| !!! | GCTATTGGAGTTTTAGAGAA+AGG | - | chr5_1:19336858-19336877 | None:intergenic | 35.0% |
| GTGGAGAATATTGTAGTCAT+TGG | + | chr5_1:19336922-19336941 | Msa0722140:CDS | 35.0% | |
| CATTTCAACTATGAGATGGA+AGG | - | chr5_1:19337183-19337202 | None:intergenic | 35.0% | |
| ACAGTGATTTCATTGAGCAA+TGG | + | chr5_1:19337861-19337880 | Msa0722140:intron | 35.0% | |
| CAGTGATTTCATTGAGCAAT+GGG | + | chr5_1:19337862-19337881 | Msa0722140:intron | 35.0% | |
| TTGCTTCCTAATTCAAATGC+AGG | + | chr5_1:19338104-19338123 | Msa0722140:intron | 35.0% | |
| AAGCTGTGAATGTATCTCTT+GGG | + | chr5_1:19338127-19338146 | Msa0722140:CDS | 35.0% | |
| ACTTATCCATTTGTGAGAGA+TGG | + | chr5_1:19338159-19338178 | Msa0722140:CDS | 35.0% | |
| ! | AAGAAAACCCTTGCTTTGAA+AGG | + | chr5_1:19338189-19338208 | Msa0722140:CDS | 35.0% |
| AGACCTTAAATGGATACAGA+GGG | - | chr5_1:19338276-19338295 | None:intergenic | 35.0% | |
| !!! | CCTTTGGAAGAGTATTTTGT+CGG | + | chr5_1:19338341-19338360 | Msa0722140:three_prime_UTR | 35.0% |
| TAGCACATAGACCTTTAAGT+TGG | + | chr5_1:19338548-19338567 | Msa0722140:three_prime_UTR | 35.0% | |
| TTAAACCAGTGACTCGAATT+TGG | + | chr5_1:19338741-19338760 | Msa0722140:three_prime_UTR | 35.0% | |
| GTGTGTGCCTAAACATACAA+GGG | - | chr5_1:19329059-19329078 | None:intergenic | 40.0% | |
| TGTGTGTGCCTAAACATACA+AGG | - | chr5_1:19329060-19329079 | None:intergenic | 40.0% | |
| CAAGCAGTAGATAATTGGAG+AGG | - | chr5_1:19329185-19329204 | None:intergenic | 40.0% | |
| !! | CTTGTTTCTGGTGGTAGAAA+TGG | + | chr5_1:19329225-19329244 | Msa0722140:intron | 40.0% |
| GTTGGAAAATGGAAGACAGA+AGG | - | chr5_1:19329600-19329619 | None:intergenic | 40.0% | |
| CCTTGGAGCTACATATAAGT+TGG | - | chr5_1:19329741-19329760 | None:intergenic | 40.0% | |
| CCAACTTATATGTAGCTCCA+AGG | + | chr5_1:19329738-19329757 | Msa0722140:intron | 40.0% | |
| ! | TATGTATTTTGTTGGGCCCT+TGG | - | chr5_1:19329758-19329777 | None:intergenic | 40.0% |
| GACCAAAGAGATAAATGGCT+GGG | + | chr5_1:19329864-19329883 | Msa0722140:exon | 40.0% | |
| ACCAAAGAGATAAATGGCTG+GGG | + | chr5_1:19329865-19329884 | Msa0722140:exon | 40.0% | |
| TTGCACAAGCAAGATTGTCT+CGG | + | chr5_1:19329913-19329932 | Msa0722140:CDS | 40.0% | |
| CAAAAGAAATGGCTTAACGC+AGG | + | chr5_1:19330023-19330042 | Msa0722140:intron | 40.0% | |
| ! | CTATGTAATGGGAAGATGGT+GGG | - | chr5_1:19330395-19330414 | None:intergenic | 40.0% |
| AATGTTGTCTCTAACGTACG+CGG | + | chr5_1:19330642-19330661 | Msa0722140:intron | 40.0% | |
| AGTCACCCAAATAAAAGACG+TGG | - | chr5_1:19330876-19330895 | None:intergenic | 40.0% | |
| AAACAAAGTGGAATCTGGTG+GGG | - | chr5_1:19330928-19330947 | None:intergenic | 40.0% | |
| !! | TTAAACACCTGCGTTTTTGG+AGG | - | chr5_1:19330999-19331018 | None:intergenic | 40.0% |
| ! | ATTCTCTCCGGTGTCAATTT+GGG | - | chr5_1:19332437-19332456 | None:intergenic | 40.0% |
| ! | ATGGCCTTTTAAACCCACTT+GGG | - | chr5_1:19332552-19332571 | None:intergenic | 40.0% |
| ! | TATGGCCTTTTAAACCCACT+TGG | - | chr5_1:19332553-19332572 | None:intergenic | 40.0% |
| !! | CTTAGTGGTACAAGTTGGTA+TGG | - | chr5_1:19332571-19332590 | None:intergenic | 40.0% |
| AACTTACAAGCCGTGATAAG+TGG | + | chr5_1:19332875-19332894 | Msa0722140:intron | 40.0% | |
| GTGTGATACTGGTGAGATTT+GGG | - | chr5_1:19332986-19333005 | None:intergenic | 40.0% | |
| TGTGTGATACTGGTGAGATT+TGG | - | chr5_1:19332987-19333006 | None:intergenic | 40.0% | |
| ! | TTACTGTGCGTGTTTAGGAT+CGG | + | chr5_1:19333778-19333797 | Msa0722140:intron | 40.0% |
| GGTTTCGTACTTACGGAATT+AGG | + | chr5_1:19333820-19333839 | Msa0722140:intron | 40.0% | |
| TCAGGATTCTTCCTGAAAAG+AGG | - | chr5_1:19334456-19334475 | None:intergenic | 40.0% | |
| ! | CACATTTTGGATTTCCAACC+GGG | + | chr5_1:19334877-19334896 | Msa0722140:CDS | 40.0% |
| TGACTTCAAACATGTAGGTG+GGG | - | chr5_1:19335160-19335179 | None:intergenic | 40.0% | |
| GTGACTTCAAACATGTAGGT+GGG | - | chr5_1:19335161-19335180 | None:intergenic | 40.0% | |
| AGTGACTTCAAACATGTAGG+TGG | - | chr5_1:19335162-19335181 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr5_1:19335292-19335311 | None:intergenic | 40.0% | |
| GTCAATTAAATTGGGACGGA+GGG | + | chr5_1:19335484-19335503 | Msa0722140:intron | 40.0% | |
| !! | GACGGAGGGAGTATATATTT+TGG | + | chr5_1:19335498-19335517 | Msa0722140:intron | 40.0% |
| ! | TCATTTTGGACTGCCTGTTT+TGG | + | chr5_1:19335728-19335747 | Msa0722140:intron | 40.0% |
| ATTCAGACACAAAGTCTGAC+TGG | + | chr5_1:19335758-19335777 | Msa0722140:intron | 40.0% | |
| CTTGGTCTGGCAAAACAAAA+AGG | - | chr5_1:19335784-19335803 | None:intergenic | 40.0% | |
| ! | GTTTTGCCAGACCAAGTATT+CGG | + | chr5_1:19335788-19335807 | Msa0722140:intron | 40.0% |
| ! | TTTTGCCAGACCAAGTATTC+GGG | + | chr5_1:19335789-19335808 | Msa0722140:intron | 40.0% |
| ATATGGTGAAGAAAGAGAGG+TGG | - | chr5_1:19335878-19335897 | None:intergenic | 40.0% | |
| ! | CATTATTTGTTGGGATCCAC+AGG | + | chr5_1:19335996-19336015 | Msa0722140:intron | 40.0% |
| TCTTCATCCTTGCAATTTCG+CGG | + | chr5_1:19336379-19336398 | Msa0722140:intron | 40.0% | |
| !!! | TTTGACGGATTTTGGTACCA+TGG | - | chr5_1:19336535-19336554 | None:intergenic | 40.0% |
| TCATGTCTATCCCAGATGAT+GGG | + | chr5_1:19336974-19336993 | Msa0722140:CDS | 40.0% | |
| CTGTGAATCAGCAACATACT+TGG | - | chr5_1:19337155-19337174 | None:intergenic | 40.0% | |
| CGACAACGTATCATCATTCA+CGG | + | chr5_1:19337415-19337434 | Msa0722140:intron | 40.0% | |
| GACAACGTATCATCATTCAC+GGG | + | chr5_1:19337416-19337435 | Msa0722140:intron | 40.0% | |
| TCCAAATTTGCAATCCAGCA+AGG | + | chr5_1:19337885-19337904 | Msa0722140:CDS | 40.0% | |
| ACCTTGCTGGATTGCAAATT+TGG | - | chr5_1:19337889-19337908 | None:intergenic | 40.0% | |
| AATTTAACCTTGGACCTTGC+TGG | - | chr5_1:19337902-19337921 | None:intergenic | 40.0% | |
| CAGCTTCCTGCATTTGAATT+AGG | - | chr5_1:19338113-19338132 | None:intergenic | 40.0% | |
| GAAGCTGTGAATGTATCTCT+TGG | + | chr5_1:19338126-19338145 | Msa0722140:CDS | 40.0% | |
| ACAACACCATCTCTCACAAA+TGG | - | chr5_1:19338168-19338187 | None:intergenic | 40.0% | |
| ATGTGCTCCTTTCAAAGCAA+GGG | - | chr5_1:19338199-19338218 | None:intergenic | 40.0% | |
| AATGTGCTCCTTTCAAAGCA+AGG | - | chr5_1:19338200-19338219 | None:intergenic | 40.0% | |
| ! | TTAATGGCACTTTTGAGCTG+TGG | + | chr5_1:19338229-19338248 | Msa0722140:CDS | 40.0% |
| ! | TAATGGCACTTTTGAGCTGT+GGG | + | chr5_1:19338230-19338249 | Msa0722140:CDS | 40.0% |
| AAATGGATACAGAGGGCAAA+AGG | - | chr5_1:19338269-19338288 | None:intergenic | 40.0% | |
| TTGCCCTCTGTATCCATTTA+AGG | + | chr5_1:19338270-19338289 | Msa0722140:CDS | 40.0% | |
| GAGACCTTAAATGGATACAG+AGG | - | chr5_1:19338277-19338296 | None:intergenic | 40.0% | |
| CCGACAAAATACTCTTCCAA+AGG | - | chr5_1:19338344-19338363 | None:intergenic | 40.0% | |
| CACTTGACACTCCAACTTAA+AGG | - | chr5_1:19338562-19338581 | None:intergenic | 40.0% | |
| !! | AAACCATTTGTTCGAGTTGC+CGG | + | chr5_1:19338689-19338708 | Msa0722140:three_prime_UTR | 40.0% |
| AACTAGCCCTTGAAATTCTC+CGG | - | chr5_1:19338711-19338730 | None:intergenic | 40.0% | |
| TCTATCCAAATTCGAGTCAC+TGG | - | chr5_1:19338749-19338768 | None:intergenic | 40.0% | |
| CTCGAATTTGGATAGAAAGC+AGG | + | chr5_1:19338753-19338772 | Msa0722140:three_prime_UTR | 40.0% | |
| ! | TCAGCACCATTTTCATGCAG+AGG | + | chr5_1:19329092-19329111 | Msa0722140:five_prime_UTR | 45.0% |
| ! | CAGCACCATTTTCATGCAGA+GGG | + | chr5_1:19329093-19329112 | Msa0722140:five_prime_UTR | 45.0% |
| ! | AGCACCATTTTCATGCAGAG+GGG | + | chr5_1:19329094-19329113 | Msa0722140:five_prime_UTR | 45.0% |
| TTTGCCCCTCTGCATGAAAA+TGG | - | chr5_1:19329101-19329120 | None:intergenic | 45.0% | |
| GTAGATAATTGGAGAGGTGG+AGG | - | chr5_1:19329179-19329198 | None:intergenic | 45.0% | |
| GCAGTAGATAATTGGAGAGG+TGG | - | chr5_1:19329182-19329201 | None:intergenic | 45.0% | |
| CTGGTGGTAGAAATGGCATT+TGG | + | chr5_1:19329232-19329251 | Msa0722140:intron | 45.0% | |
| ACAGAAGGCCCATTTACTGT+TGG | - | chr5_1:19329585-19329604 | None:intergenic | 45.0% | |
| AAATGCAAAGCAGGGTGAAG+AGG | + | chr5_1:19329842-19329861 | Msa0722140:intron | 45.0% | |
| GGACCAAAGAGATAAATGGC+TGG | + | chr5_1:19329863-19329882 | Msa0722140:exon | 45.0% | |
| AAGAAATGGCTTAACGCAGG+AGG | + | chr5_1:19330026-19330045 | Msa0722140:intron | 45.0% | |
| ! | CCTATGTAATGGGAAGATGG+TGG | - | chr5_1:19330396-19330415 | None:intergenic | 45.0% |
| CCACCATCTTCCCATTACAT+AGG | + | chr5_1:19330393-19330412 | Msa0722140:intron | 45.0% | |
| ! | AAAAGGGGGTGTAAGGAATC+AGG | - | chr5_1:19330832-19330851 | None:intergenic | 45.0% |
| !! | GGCCACCACGTCTTTTATTT+GGG | + | chr5_1:19330868-19330887 | Msa0722140:intron | 45.0% |
| CACCCAAATAAAAGACGTGG+TGG | - | chr5_1:19330873-19330892 | None:intergenic | 45.0% | |
| AACAAAGTGGAATCTGGTGG+GGG | - | chr5_1:19330927-19330946 | None:intergenic | 45.0% | |
| ACCTCTATGGTCCAAAACGA+AGG | + | chr5_1:19331045-19331064 | Msa0722140:intron | 45.0% | |
| !! | ACCTTCGTTTTGGACCATAG+AGG | - | chr5_1:19331049-19331068 | None:intergenic | 45.0% |
| ! | GATTCTCTCCGGTGTCAATT+TGG | - | chr5_1:19332438-19332457 | None:intergenic | 45.0% |
| !! | TGAGTGGACTAGATTCTCTC+CGG | - | chr5_1:19332449-19332468 | None:intergenic | 45.0% |
| ! | CCTTTTAAACCCACTTGGGT+TGG | - | chr5_1:19332548-19332567 | None:intergenic | 45.0% |
| ! | CCAACCCAAGTGGGTTTAAA+AGG | + | chr5_1:19332545-19332564 | Msa0722140:intron | 45.0% |
| TTGACGCGGTAGCTATATAG+TGG | - | chr5_1:19332930-19332949 | None:intergenic | 45.0% | |
| !! | AGACGACGAACCTTGGTTTT+TGG | - | chr5_1:19333025-19333044 | None:intergenic | 45.0% |
| AATCAGAAGGAAGACATGGC+TGG | + | chr5_1:19333378-19333397 | Msa0722140:intron | 45.0% | |
| !! | TTCATTTGATAACGCGGAGG+TGG | + | chr5_1:19333524-19333543 | Msa0722140:intron | 45.0% |
| ! | ACGTTTTCCGTTTCGTTTCC+AGG | + | chr5_1:19333601-19333620 | Msa0722140:intron | 45.0% |
| ! | CGTTTTCCGTTTCGTTTCCA+GGG | + | chr5_1:19333602-19333621 | Msa0722140:intron | 45.0% |
| CTTTCTCCCTGGAAACGAAA+CGG | - | chr5_1:19333611-19333630 | None:intergenic | 45.0% | |
| !! | GTTAAACGGCTTTGAACCGT+TGG | - | chr5_1:19333691-19333710 | None:intergenic | 45.0% |
| ATCCTCTCATCCGGGTTAAA+CGG | - | chr5_1:19333705-19333724 | None:intergenic | 45.0% | |
| CCTCAACTTACGGCATAGTT+GGG | - | chr5_1:19334346-19334365 | None:intergenic | 45.0% | |
| ! | CCAACTATGCCGTAAGTTGA+GGG | + | chr5_1:19334344-19334363 | Msa0722140:intron | 45.0% |
| ! | CAACTATGCCGTAAGTTGAG+GGG | + | chr5_1:19334345-19334364 | Msa0722140:intron | 45.0% |
| AGGAAGAATCCTGAGCTGTA+CGG | + | chr5_1:19334462-19334481 | Msa0722140:intron | 45.0% | |
| ! | AGTGTGCCCTTCTCACATTT+TGG | + | chr5_1:19334864-19334883 | Msa0722140:CDS | 45.0% |
| GAACCATGTTGGCGATGTTA+CGG | - | chr5_1:19334918-19334937 | None:intergenic | 45.0% | |
| ! | GTCATATGGTGGAACCATGT+TGG | - | chr5_1:19334929-19334948 | None:intergenic | 45.0% |
| CATGGTTCCACCATATGACA+AGG | + | chr5_1:19334930-19334949 | Msa0722140:CDS | 45.0% | |
| GGTCAATTAAATTGGGACGG+AGG | + | chr5_1:19335483-19335502 | Msa0722140:intron | 45.0% | |
| CTCTTGGAACAGTGGAAGTT+TGG | + | chr5_1:19335936-19335955 | Msa0722140:intron | 45.0% | |
| GAACAGTGGAAGTTTGGTAG+AGG | + | chr5_1:19335942-19335961 | Msa0722140:intron | 45.0% | |
| ! | TTTTGGTCCGCGAAATTGCA+AGG | - | chr5_1:19336389-19336408 | None:intergenic | 45.0% |
| CTCATGTCTATCCCAGATGA+TGG | + | chr5_1:19336973-19336992 | Msa0722140:CDS | 45.0% | |
| CAATAAAACCTACCTTGCGG+TGG | - | chr5_1:19337001-19337020 | None:intergenic | 45.0% | |
| CGTATCATCATTCACGGGAA+AGG | + | chr5_1:19337421-19337440 | Msa0722140:intron | 45.0% | |
| GCAGTGCACAAACTGTGAAA+AGG | + | chr5_1:19337949-19337968 | Msa0722140:CDS | 45.0% | |
| ! | GGTGTTGGAGAGACCTTAAA+TGG | - | chr5_1:19338286-19338305 | None:intergenic | 45.0% |
| ! | CTGCAAGTTCACTTTGGTGT+TGG | - | chr5_1:19338301-19338320 | None:intergenic | 45.0% |
| GAGTTGCCGGAGAATTTCAA+GGG | + | chr5_1:19338702-19338721 | Msa0722140:three_prime_UTR | 45.0% | |
| !!! | ATTTTTTATAATATAGTTTA+TGG | + | chr5_1:19330456-19330475 | Msa0722140:intron | 5.0% |
| !! | TAATTGAAAAATTATTTAAT+TGG | + | chr5_1:19330499-19330518 | Msa0722140:intron | 5.0% |
| !! | AAAATTAAAAAACATATATT+GGG | - | chr5_1:19331371-19331390 | None:intergenic | 5.0% |
| !! | TAAAATTAAAAAACATATAT+TGG | - | chr5_1:19331372-19331391 | None:intergenic | 5.0% |
| !!! | TTTAATCTTTTTATATATTT+GGG | - | chr5_1:19331903-19331922 | None:intergenic | 5.0% |
| !!! | ATTTAATCTTTTTATATATT+TGG | - | chr5_1:19331904-19331923 | None:intergenic | 5.0% |
| !!! | ATATTTTTTATAAATAAGAT+CGG | + | chr5_1:19334146-19334165 | Msa0722140:intron | 5.0% |
| !! | ATAAAAAATTAAAACTAATT+AGG | - | chr5_1:19334581-19334600 | None:intergenic | 5.0% |
| !!! | ATTTTTTTAATTTCATTTTA+AGG | + | chr5_1:19338500-19338519 | Msa0722140:three_prime_UTR | 5.0% |
| GCCCCAGCCATTTATCTCTT+TGG | - | chr5_1:19329869-19329888 | None:intergenic | 50.0% | |
| AAATGGCTTAACGCAGGAGG+AGG | + | chr5_1:19330029-19330048 | Msa0722140:intron | 50.0% | |
| TGGTAAGGCATGTGCCTTGT+AGG | - | chr5_1:19330297-19330316 | None:intergenic | 50.0% | |
| GCACATGCCTTACCAAGAGT+AGG | + | chr5_1:19330302-19330321 | Msa0722140:intron | 50.0% | |
| ! | GGGCCACCACGTCTTTTATT+TGG | + | chr5_1:19330867-19330886 | Msa0722140:intron | 50.0% |
| GTACAAGCCTCCAAAAACGC+AGG | + | chr5_1:19330989-19331008 | Msa0722140:intron | 50.0% | |
| TGGATCACGACGAGAGACTT+GGG | - | chr5_1:19331871-19331890 | None:intergenic | 50.0% | |
| TTGGATCACGACGAGAGACT+TGG | - | chr5_1:19331872-19331891 | None:intergenic | 50.0% | |
| TAGCCCACCCAAATTGACAC+CGG | + | chr5_1:19332427-19332446 | Msa0722140:intron | 50.0% | |
| ! | TCTCCGGTGTCAATTTGGGT+GGG | - | chr5_1:19332433-19332452 | None:intergenic | 50.0% |
| ! | CTCTCTGGTGCCAATTTGAG+TGG | - | chr5_1:19332465-19332484 | None:intergenic | 50.0% |
| GTCTCAGGTTCGATTCTCTC+TGG | - | chr5_1:19332480-19332499 | None:intergenic | 50.0% | |
| GAATCGAACCTGAGACCTTG+CGG | + | chr5_1:19332484-19332503 | Msa0722140:intron | 50.0% | |
| AGACCTAAGCCAATACCACC+AGG | + | chr5_1:19332522-19332541 | Msa0722140:intron | 50.0% | |
| ! | GCTGGGTATGCCACTTATCA+CGG | - | chr5_1:19332888-19332907 | None:intergenic | 50.0% |
| ACGCGGTAGCTATATAGTGG+AGG | - | chr5_1:19332927-19332946 | None:intergenic | 50.0% | |
| CATGGCTGGAGAAACATTCG+AGG | + | chr5_1:19333392-19333411 | Msa0722140:CDS | 50.0% | |
| !! | ATTTGATAACGCGGAGGTGG+TGG | + | chr5_1:19333527-19333546 | Msa0722140:intron | 50.0% |
| CGTCAGCTCCTTGATCTTCA+CGG | - | chr5_1:19333655-19333674 | None:intergenic | 50.0% | |
| CGTGAAGATCAAGGAGCTGA+CGG | + | chr5_1:19333653-19333672 | Msa0722140:CDS | 50.0% | |
| CGGTTCAAAGCCGTTTAACC+CGG | + | chr5_1:19333692-19333711 | Msa0722140:CDS | 50.0% | |
| CCCAACTATGCCGTAAGTTG+AGG | + | chr5_1:19334343-19334362 | Msa0722140:intron | 50.0% | |
| CCCTCAACTTACGGCATAGT+TGG | - | chr5_1:19334347-19334366 | None:intergenic | 50.0% | |
| ! | GTGCTGTACGTCCTCTTTTC+AGG | + | chr5_1:19334442-19334461 | Msa0722140:intron | 50.0% |
| CTGTACGGTGAACTTGCCAA+AGG | + | chr5_1:19334477-19334496 | Msa0722140:CDS | 50.0% | |
| AATAGCTGACCTTAGGGCTC+TGG | - | chr5_1:19334503-19334522 | None:intergenic | 50.0% | |
| TCTTTGTACTCACTCCGTCC+CGG | + | chr5_1:19335271-19335290 | Msa0722140:intron | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr5_1:19335288-19335307 | None:intergenic | 50.0% | |
| AGACCAAGTATTCGGGAGCA+GGG | + | chr5_1:19335796-19335815 | Msa0722140:intron | 50.0% | |
| TGGTGAAGAAAGAGAGGTGG+TGG | - | chr5_1:19335875-19335894 | None:intergenic | 50.0% | |
| ! | AGCTGCTGTGGAGGCATAAA+GGG | + | chr5_1:19336949-19336968 | Msa0722140:CDS | 50.0% |
| CATCATTCACGGGAAAGGAG+AGG | + | chr5_1:19337426-19337445 | Msa0722140:intron | 50.0% | |
| TTGCAATCCAGCAAGGTCCA+AGG | + | chr5_1:19337892-19337911 | Msa0722140:CDS | 50.0% | |
| TCTCCGGCAACTCGAACAAA+TGG | - | chr5_1:19338695-19338714 | None:intergenic | 50.0% | |
| CGAGTTGCCGGAGAATTTCA+AGG | + | chr5_1:19338701-19338720 | Msa0722140:three_prime_UTR | 50.0% | |
| CTCTAACGTACGCGGTGCAT+AGG | + | chr5_1:19330650-19330669 | Msa0722140:intron | 55.0% | |
| AAGTGGAATCTGGTGGGGGT+GGG | - | chr5_1:19330923-19330942 | None:intergenic | 55.0% | |
| AAAGTGGAATCTGGTGGGGG+TGG | - | chr5_1:19330924-19330943 | None:intergenic | 55.0% | |
| ! | CTCTCCGGTGTCAATTTGGG+TGG | - | chr5_1:19332434-19332453 | None:intergenic | 55.0% |
| ! | TGAGAGTGTGCTCTTCCGCA+AGG | - | chr5_1:19332502-19332521 | None:intergenic | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+AGG | - | chr5_1:19332528-19332547 | None:intergenic | 55.0% |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | - | chr5_1:19332534-19332553 | None:intergenic | 55.0% |
| !! | TAAACCCACTTGGGTTGGCC+TGG | - | chr5_1:19332543-19332562 | None:intergenic | 55.0% |
| TCCAGGGAGAAAGCTGAGCT+TGG | + | chr5_1:19333618-19333637 | Msa0722140:intron | 55.0% | |
| ACCAAGCTCAGCTTTCTCCC+TGG | - | chr5_1:19333622-19333641 | None:intergenic | 55.0% | |
| CAGCTCCTTGATCTTCACGG+CGG | - | chr5_1:19333652-19333671 | None:intergenic | 55.0% | |
| GAAGATCAAGGAGCTGACGG+CGG | + | chr5_1:19333656-19333675 | Msa0722140:CDS | 55.0% | |
| AGCCGTTTAACCCGGATGAG+AGG | + | chr5_1:19333700-19333719 | Msa0722140:CDS | 55.0% | |
| GCAAGTTCACCGTACAGCTC+AGG | - | chr5_1:19334474-19334493 | None:intergenic | 55.0% | |
| GGCGATGTTACGGACCACAA+AGG | - | chr5_1:19334908-19334927 | None:intergenic | 55.0% | |
| GGTCCGTAACATCGCCAACA+TGG | + | chr5_1:19334912-19334931 | Msa0722140:CDS | 55.0% | |
| CTGCTCCCGAATACTTGGTC+TGG | - | chr5_1:19335797-19335816 | None:intergenic | 55.0% | |
| CAGACCAAGTATTCGGGAGC+AGG | + | chr5_1:19335795-19335814 | Msa0722140:intron | 55.0% | |
| GACCAAGTATTCGGGAGCAG+GGG | + | chr5_1:19335797-19335816 | Msa0722140:intron | 55.0% | |
| AGGGGCGGCCATTGAATATG+CGG | + | chr5_1:19335815-19335834 | Msa0722140:CDS | 55.0% | |
| ! | TGGTGGGTCTCTTGGAACAG+TGG | + | chr5_1:19335928-19335947 | Msa0722140:intron | 55.0% |
| GTCATTGGACACAGCTGCTG+TGG | + | chr5_1:19336937-19336956 | Msa0722140:CDS | 55.0% | |
| ATTGGACACAGCTGCTGTGG+AGG | + | chr5_1:19336940-19336959 | Msa0722140:CDS | 55.0% | |
| ! | CAGCTGCTGTGGAGGCATAA+AGG | + | chr5_1:19336948-19336967 | Msa0722140:CDS | 55.0% |
| ! | GCTGCTGTGGAGGCATAAAG+GGG | + | chr5_1:19336950-19336969 | Msa0722140:CDS | 55.0% |
| TTGCGGTGGTCCCATCATCT+GGG | - | chr5_1:19336987-19337006 | None:intergenic | 55.0% | |
| AATCTGGTGGGGGTGGGACT+TGG | - | chr5_1:19330917-19330936 | None:intergenic | 60.0% | |
| GTGCTCTTCCGCAAGGTCTC+AGG | - | chr5_1:19332495-19332514 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | + | chr5_1:19332535-19332554 | Msa0722140:intron | 60.0% | |
| ACCACCAGGCCAACCCAAGT+GGG | + | chr5_1:19332536-19332555 | Msa0722140:intron | 60.0% | |
| GAGAGAGACCACAACGCGCT+GGG | - | chr5_1:19332905-19332924 | None:intergenic | 60.0% | |
| CATCGCCGCCGTGAAGATCA+AGG | + | chr5_1:19333644-19333663 | Msa0722140:CDS | 60.0% | |
| ACGGCGGAGTTAGAGGCCAA+CGG | + | chr5_1:19333672-19333691 | Msa0722140:CDS | 60.0% | |
| CGGATCGGATCCTCTCATCC+GGG | - | chr5_1:19333713-19333732 | None:intergenic | 60.0% | |
| CCGGATCGGATCCTCTCATC+CGG | - | chr5_1:19333714-19333733 | None:intergenic | 60.0% | |
| CCGGATGAGAGGATCCGATC+CGG | + | chr5_1:19333711-19333730 | Msa0722140:CDS | 60.0% | |
| TGCCAAAGGCCAGAGCCCTA+AGG | + | chr5_1:19334491-19334510 | Msa0722140:CDS | 60.0% | |
| ! | GACCTTAGGGCTCTGGCCTT+TGG | - | chr5_1:19334496-19334515 | None:intergenic | 60.0% |
| CCACAAAGGCTTCACCCGGT+TGG | - | chr5_1:19334894-19334913 | None:intergenic | 60.0% | |
| CCAACCGGGTGAAGCCTTTG+TGG | + | chr5_1:19334891-19334910 | Msa0722140:CDS | 60.0% | |
| CGGACCACAAAGGCTTCACC+CGG | - | chr5_1:19334898-19334917 | None:intergenic | 60.0% | |
| CAAGTATTCGGGAGCAGGGG+CGG | + | chr5_1:19335800-19335819 | Msa0722140:CDS | 60.0% | |
| CTTGCGGTGGTCCCATCATC+TGG | - | chr5_1:19336988-19337007 | None:intergenic | 60.0% | |
| !! | CAGATGATGGGACCACCGCA+AGG | + | chr5_1:19336986-19337005 | Msa0722140:CDS | 60.0% |
| TGATGGGACCACCGCAAGGT+AGG | + | chr5_1:19336990-19337009 | Msa0722140:intron | 60.0% | |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | - | chr5_1:19332540-19332559 | None:intergenic | 65.0% |
| GTGGCATACCCAGCGCGTTG+TGG | + | chr5_1:19332894-19332913 | Msa0722140:intron | 65.0% | |
| GGAGAGAGACCACAACGCGC+TGG | - | chr5_1:19332906-19332925 | None:intergenic | 65.0% | |
| GGAGCTGACGGCGGAGTTAG+AGG | + | chr5_1:19333665-19333684 | Msa0722140:CDS | 65.0% | |
| CGCCCCTGCTCCCGAATACT+TGG | - | chr5_1:19335802-19335821 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 19328847 | 19338783 | 19328847 | ID=Msa0722140;Name=Msa0722140 |
| chr5_1 | mRNA | 19328847 | 19338783 | 19328847 | ID=Msa0722140-mRNA-1;Parent=Msa0722140;Name=Msa0722140-mRNA-1;_AED=0.31;_eAED=0.31;_QI=340|1|1|1|0.77|0.7|10|493|278 |
| chr5_1 | exon | 19328847 | 19329163 | 19328847 | ID=Msa0722140-mRNA-1:exon:7253;Parent=Msa0722140-mRNA-1 |
| chr5_1 | exon | 19329855 | 19329934 | 19329855 | ID=Msa0722140-mRNA-1:exon:7254;Parent=Msa0722140-mRNA-1 |
| chr5_1 | exon | 19333384 | 19333445 | 19333384 | ID=Msa0722140-mRNA-1:exon:7255;Parent=Msa0722140-mRNA-1 |
| chr5_1 | exon | 19333623 | 19333763 | 19333623 | ID=Msa0722140-mRNA-1:exon:7256;Parent=Msa0722140-mRNA-1 |
| chr5_1 | exon | 19334464 | 19334512 | 19334464 | ID=Msa0722140-mRNA-1:exon:7257;Parent=Msa0722140-mRNA-1 |
| chr5_1 | exon | 19334835 | 19334951 | 19334835 | ID=Msa0722140-mRNA-1:exon:7258;Parent=Msa0722140-mRNA-1 |
| chr5_1 | exon | 19335798 | 19335851 | 19335798 | ID=Msa0722140-mRNA-1:exon:7259;Parent=Msa0722140-mRNA-1 |
| chr5_1 | exon | 19336922 | 19337007 | 19336922 | ID=Msa0722140-mRNA-1:exon:7260;Parent=Msa0722140-mRNA-1 |
| chr5_1 | exon | 19337865 | 19337970 | 19337865 | ID=Msa0722140-mRNA-1:exon:7261;Parent=Msa0722140-mRNA-1 |
| chr5_1 | exon | 19338126 | 19338783 | 19338126 | ID=Msa0722140-mRNA-1:exon:7262;Parent=Msa0722140-mRNA-1 |
| chr5_1 | five_prime_UTR | 19328847 | 19329163 | 19328847 | ID=Msa0722140-mRNA-1:five_prime_utr;Parent=Msa0722140-mRNA-1 |
| chr5_1 | five_prime_UTR | 19329855 | 19329877 | 19329855 | ID=Msa0722140-mRNA-1:five_prime_utr;Parent=Msa0722140-mRNA-1 |
| chr5_1 | CDS | 19329878 | 19329934 | 19329878 | ID=Msa0722140-mRNA-1:cds;Parent=Msa0722140-mRNA-1 |
| chr5_1 | CDS | 19333384 | 19333445 | 19333384 | ID=Msa0722140-mRNA-1:cds;Parent=Msa0722140-mRNA-1 |
| chr5_1 | CDS | 19333623 | 19333763 | 19333623 | ID=Msa0722140-mRNA-1:cds;Parent=Msa0722140-mRNA-1 |
| chr5_1 | CDS | 19334464 | 19334512 | 19334464 | ID=Msa0722140-mRNA-1:cds;Parent=Msa0722140-mRNA-1 |
| chr5_1 | CDS | 19334835 | 19334951 | 19334835 | ID=Msa0722140-mRNA-1:cds;Parent=Msa0722140-mRNA-1 |
| chr5_1 | CDS | 19335798 | 19335851 | 19335798 | ID=Msa0722140-mRNA-1:cds;Parent=Msa0722140-mRNA-1 |
| chr5_1 | CDS | 19336922 | 19337007 | 19336922 | ID=Msa0722140-mRNA-1:cds;Parent=Msa0722140-mRNA-1 |
| chr5_1 | CDS | 19337865 | 19337970 | 19337865 | ID=Msa0722140-mRNA-1:cds;Parent=Msa0722140-mRNA-1 |
| chr5_1 | CDS | 19338126 | 19338290 | 19338126 | ID=Msa0722140-mRNA-1:cds;Parent=Msa0722140-mRNA-1 |
| chr5_1 | three_prime_UTR | 19338291 | 19338783 | 19338291 | ID=Msa0722140-mRNA-1:three_prime_utr;Parent=Msa0722140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
