Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724030 | XP_003613437.2 | 97.727 | 440 | 10 | 0 | 1 | 440 | 528 | 967 | 0.0 | 874 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724030 | sp|B9DFG3|ISE2_ARATH | 61.298 | 447 | 166 | 3 | 1 | 440 | 537 | 983 | 0.0 | 550 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724030 | G7K5N2 | 97.727 | 440 | 10 | 0 | 1 | 440 | 528 | 967 | 0.0 | 874 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0724030 | Msa0724050 | 0.836314 | 1.005978e-56 | -8.615850e-47 |
| Msa0724030 | Msa0763880 | 0.835000 | 2.164934e-56 | -8.615850e-47 |
| Msa0724030 | Msa0763910 | 0.821673 | 3.562564e-53 | -8.615850e-47 |
| Msa0724030 | Msa1401470 | 0.803616 | 3.201834e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724030 | MtrunA17_Chr5g0415021 | 97.727 | 440 | 10 | 0 | 1 | 440 | 528 | 967 | 0.0 | 874 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724030 | AT1G70070.1 | 61.298 | 447 | 166 | 3 | 1 | 440 | 537 | 983 | 0.0 | 550 |
Find 132 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAATTGCAGGAAAATTTA+AGG | 0.138511 | 5_1:-22112516 | Msa0724030:CDS |
| TGGAGAATTGACTTTGTTTC+TGG | 0.149737 | 5_1:+22110717 | None:intergenic |
| CTTCAGATGGCTGGGCGTGC+TGG | 0.172106 | 5_1:-22112943 | Msa0724030:CDS |
| ACTCTGAACACGGTGGTTTA+TGG | 0.172637 | 5_1:-22112042 | Msa0724030:CDS |
| TAAGGGCAGAGAAACGTATT+AGG | 0.244441 | 5_1:-22112498 | Msa0724030:CDS |
| AGCGTGCAACTTTACTTCTT+TGG | 0.292744 | 5_1:+22111891 | None:intergenic |
| CTCTGAACACGGTGGTTTAT+GGG | 0.308520 | 5_1:-22112041 | Msa0724030:CDS |
| TCTTGGAGCTTGAACGTTCC+AGG | 0.316057 | 5_1:-22111992 | Msa0724030:CDS |
| CAGCACCTTCATTAGGAGTT+TGG | 0.317059 | 5_1:+22112881 | None:intergenic |
| CCAGTACGTGTACGTGAAAC+AGG | 0.319541 | 5_1:-22110870 | Msa0724030:CDS |
| AAGTTAATTGAGCAAAGTTT+TGG | 0.338780 | 5_1:-22112691 | Msa0724030:CDS |
| GCGGTGGGTGAAGGTGGCGG+TGG | 0.340395 | 5_1:+22110800 | None:intergenic |
| CCCGATGTTCCGTTAGTTCA+AGG | 0.360849 | 5_1:-22112136 | Msa0724030:CDS |
| CAAATGGTGGGACCCCTTCC+CGG | 0.367038 | 5_1:-22109611 | Msa0724030:CDS |
| CAAGGAGATTGCAGAATTGC+AGG | 0.367183 | 5_1:-22112527 | Msa0724030:CDS |
| CACTCTTCAGCACCTTCATT+AGG | 0.367766 | 5_1:+22112874 | None:intergenic |
| TTACACAAGAGGCTGTTTCC+AGG | 0.376147 | 5_1:+22109663 | None:intergenic |
| CGGGAAGGGGTCCCACCATT+TGG | 0.381455 | 5_1:+22109612 | None:intergenic |
| TTCAGATGGCTGGGCGTGCT+GGG | 0.385541 | 5_1:-22112942 | Msa0724030:CDS |
| TGGGTGATGTCGCGCTTCCA+AGG | 0.390955 | 5_1:+22110820 | None:intergenic |
| GATCCAAACGTCTGACTAAT+CGG | 0.393800 | 5_1:-22111769 | Msa0724030:CDS |
| TTGGTAAGTTCGCCGATTGC+GGG | 0.395367 | 5_1:+22110768 | None:intergenic |
| CTCAGCAAAAGAAGTGATAC+TGG | 0.396484 | 5_1:-22112994 | Msa0724030:CDS |
| AATGAACTGCTTCAGATGGC+TGG | 0.407138 | 5_1:-22112952 | Msa0724030:CDS |
| GACGAGATGAAAACTTCATC+AGG | 0.407871 | 5_1:-22112736 | Msa0724030:CDS |
| TATCCGATTAGTCAGACGTT+TGG | 0.408121 | 5_1:+22111766 | None:intergenic |
| CTCTTCTAATAATGGTTTCA+AGG | 0.410172 | 5_1:+22112435 | None:intergenic |
| ATTGCAGTGGCGGTGGGTGA+AGG | 0.421127 | 5_1:+22110791 | None:intergenic |
| AGAATTGCAGGAAAATTTAA+GGG | 0.428014 | 5_1:-22112515 | Msa0724030:CDS |
| GTTTACTGCTTCTAATGGTA+TGG | 0.429661 | 5_1:-22112809 | Msa0724030:CDS |
| TCGCAGTTTACTGCTTCTAA+TGG | 0.432969 | 5_1:-22112814 | Msa0724030:CDS |
| CCTGTTTCACGTACACGTAC+TGG | 0.437593 | 5_1:+22110870 | None:intergenic |
| GCATACGCAGGGTCCGGGAA+GGG | 0.438816 | 5_1:+22109598 | None:intergenic |
| TTGCGGGATTGCAGTGGCGG+TGG | 0.441515 | 5_1:+22110784 | None:intergenic |
| CATACGCAGGGTCCGGGAAG+GGG | 0.441791 | 5_1:+22109599 | None:intergenic |
| GCTCCCGCATACGCAGGGTC+CGG | 0.442051 | 5_1:+22109592 | None:intergenic |
| AAGGGCAGAGAAACGTATTA+GGG | 0.447626 | 5_1:-22112497 | Msa0724030:CDS |
| CATCTGAAGCAGTTCATTTG+AGG | 0.451663 | 5_1:+22112957 | None:intergenic |
| CCATCATATCATGTAGCTCT+TGG | 0.452287 | 5_1:-22112223 | Msa0724030:CDS |
| TTCCCGGACCCTGCGTATGC+GGG | 0.454460 | 5_1:-22109595 | Msa0724030:CDS |
| CGCCACTGCAATCCCGCAAT+CGG | 0.455951 | 5_1:-22110780 | Msa0724030:CDS |
| AAGGTCACGGGTTCAAGTCC+TGG | 0.458245 | 5_1:-22109681 | Msa0724030:CDS |
| GTCGCCTTGCTATCCCCATA+TGG | 0.460040 | 5_1:-22111208 | Msa0724030:intron |
| TTGGGAAAGGTCGACTCCCT+TGG | 0.462085 | 5_1:-22112337 | Msa0724030:CDS |
| GATCTCTGGAGACATGGTCT+TGG | 0.464034 | 5_1:-22112009 | Msa0724030:CDS |
| AACTTCATCAGGGAAAACTT+TGG | 0.466456 | 5_1:-22112725 | Msa0724030:CDS |
| GTGGCGGTGGGTGAAGGTGG+CGG | 0.468169 | 5_1:+22110797 | None:intergenic |
| CTCTTGGCTCAGATAACTCT+TGG | 0.469381 | 5_1:-22112207 | Msa0724030:CDS |
| TGTTATGCTGGCTGCTAAAG+AGG | 0.472502 | 5_1:-22112650 | Msa0724030:CDS |
| CTGGAGATTGATTCAGAGAG+AGG | 0.475267 | 5_1:+22110736 | None:intergenic |
| GGTATCTATTTACAGAAAAG+TGG | 0.477491 | 5_1:-22112186 | Msa0724030:CDS |
| CTCCCGCATACGCAGGGTCC+GGG | 0.477983 | 5_1:+22109593 | None:intergenic |
| CGGTGGGTGAAGGTGGCGGT+GGG | 0.481741 | 5_1:+22110801 | None:intergenic |
| GTTGGTAAGTTCGCCGATTG+CGG | 0.484697 | 5_1:+22110767 | None:intergenic |
| ACTCATAATTTCTCGAGGTC+GGG | 0.488083 | 5_1:+22112108 | None:intergenic |
| CTTCCCGGACCCTGCGTATG+CGG | 0.488315 | 5_1:-22109596 | Msa0724030:CDS |
| GCTACATGATATGATGGTAC+AGG | 0.490168 | 5_1:+22112229 | None:intergenic |
| CCGATGTTCCGTTAGTTCAA+GGG | 0.492311 | 5_1:-22112135 | Msa0724030:CDS |
| CAATCGGCGAACTTACCAAC+CGG | 0.493829 | 5_1:-22110764 | Msa0724030:CDS |
| CACTCATAATTTCTCGAGGT+CGG | 0.494647 | 5_1:+22112107 | None:intergenic |
| TGTTAGTAGCAGTGTTATGC+TGG | 0.495742 | 5_1:-22112662 | Msa0724030:CDS |
| ATGGGTCACAGAAGGATCTC+TGG | 0.496228 | 5_1:-22112023 | Msa0724030:CDS |
| CGCATACGCAGGGTCCGGGA+AGG | 0.499824 | 5_1:+22109597 | None:intergenic |
| CCTTGAACTAACGGAACATC+GGG | 0.501935 | 5_1:+22112136 | None:intergenic |
| TATGAGTGATCTCCTTGATA+AGG | 0.505522 | 5_1:-22112092 | Msa0724030:CDS |
| GCAGTGGCGGTGGGTGAAGG+TGG | 0.507423 | 5_1:+22110794 | None:intergenic |
| GGTGGTGGGAAAGCCCTTCG+TGG | 0.511616 | 5_1:-22112772 | Msa0724030:CDS |
| TCAGAGAAGCTACTCAAACC+TGG | 0.521169 | 5_1:+22111974 | None:intergenic |
| GAAATAACAGCTGTTCTAGC+AGG | 0.521727 | 5_1:+22113021 | None:intergenic |
| CCCTTGAACTAACGGAACAT+CGG | 0.522108 | 5_1:+22112135 | None:intergenic |
| GCTGCGTACAATACACCAAA+TGG | 0.522967 | 5_1:-22109627 | Msa0724030:CDS |
| CCAAGAGCTACATGATATGA+TGG | 0.524587 | 5_1:+22112223 | None:intergenic |
| ATGAACTGCTTCAGATGGCT+GGG | 0.525138 | 5_1:-22112951 | Msa0724030:CDS |
| TGCGGGATTGCAGTGGCGGT+GGG | 0.526567 | 5_1:+22110785 | None:intergenic |
| AAACAAAGTCAATTCTCCAT+TGG | 0.529936 | 5_1:-22110713 | Msa0724030:CDS |
| AATTGAACCCTCAGGTTGGA+AGG | 0.531560 | 5_1:-22111738 | Msa0724030:CDS |
| TTTATCACAGCGACAATACA+AGG | 0.536890 | 5_1:-22112545 | Msa0724030:CDS |
| CTTCATTAGGAGTTTGGACG+AGG | 0.537266 | 5_1:+22112887 | None:intergenic |
| GATTCAGAGAGAGGAGATGC+CGG | 0.537451 | 5_1:+22110745 | None:intergenic |
| ACTTCATGTCCTCCTTATCA+AGG | 0.539735 | 5_1:+22112080 | None:intergenic |
| ATTAAAACAGTATATGAGAC+AGG | 0.545363 | 5_1:-22112163 | Msa0724030:CDS |
| CGATGTTCCGTTAGTTCAAG+GGG | 0.545809 | 5_1:-22112134 | Msa0724030:CDS |
| CAGAAGGATCTCTGGAGACA+TGG | 0.548119 | 5_1:-22112015 | Msa0724030:CDS |
| CGGGTATCCCCTTGAACTAA+CGG | 0.549497 | 5_1:+22112127 | None:intergenic |
| CTCGTCCAAACTCCTAATGA+AGG | 0.550003 | 5_1:-22112886 | Msa0724030:CDS |
| GGGTGATGTCGCGCTTCCAA+GGG | 0.550059 | 5_1:+22110821 | None:intergenic |
| TCATGTGACTGGAAGGTCAC+GGG | 0.550602 | 5_1:-22109693 | Msa0724030:intron |
| GGAAAACTTTGGATGAAGCT+AGG | 0.551284 | 5_1:-22112714 | Msa0724030:CDS |
| AACAAATTGAACCCTCAGGT+TGG | 0.551715 | 5_1:-22111742 | Msa0724030:CDS |
| ACTAAAGCTCCCGCATACGC+AGG | 0.556851 | 5_1:+22109586 | None:intergenic |
| AGTAGAGAGATTGAGACCAA+TGG | 0.558291 | 5_1:+22110697 | None:intergenic |
| CGATTGCGGGATTGCAGTGG+CGG | 0.560021 | 5_1:+22110781 | None:intergenic |
| CACCGTGTTCAGAGTTAGCA+AGG | 0.561723 | 5_1:+22112050 | None:intergenic |
| AAGAAGATATCTCGTACTCA+AGG | 0.563790 | 5_1:-22111863 | Msa0724030:CDS |
| AGGTTGGAAGGAGTTTATGC+AGG | 0.564082 | 5_1:-22111726 | Msa0724030:intron |
| CGCCGATTGCGGGATTGCAG+TGG | 0.566557 | 5_1:+22110778 | None:intergenic |
| GGCTGAATTGCGAAGACAGA+AGG | 0.568618 | 5_1:-22112476 | Msa0724030:CDS |
| CGTAGAGGCATTGATGAAAG+TGG | 0.569588 | 5_1:-22112919 | Msa0724030:CDS |
| CGATGTGTTTGACCCACGAA+GGG | 0.570913 | 5_1:+22112759 | None:intergenic |
| GTGGTGGGAAAGCCCTTCGT+GGG | 0.579956 | 5_1:-22112771 | Msa0724030:CDS |
| GCTGGGCGTGCTGGGCGTAG+AGG | 0.584556 | 5_1:-22112934 | Msa0724030:CDS |
| CAGTTCATTTGAGGTCAACA+AGG | 0.589035 | 5_1:+22112966 | None:intergenic |
| ATAGAACAAATTGAACCCTC+AGG | 0.589569 | 5_1:-22111746 | Msa0724030:CDS |
| CTACATGATATGATGGTACA+GGG | 0.590670 | 5_1:+22112230 | None:intergenic |
| CTCAAATGAACTGCTTCAGA+TGG | 0.592097 | 5_1:-22112956 | Msa0724030:CDS |
| GAGTGATCTCCTTGATAAGG+AGG | 0.601120 | 5_1:-22112089 | Msa0724030:CDS |
| GCGTACAATACACCAAATGG+TGG | 0.601920 | 5_1:-22109624 | Msa0724030:CDS |
| TAGCTTCTCTGAAAATGAAG+AGG | 0.603633 | 5_1:-22111963 | Msa0724030:CDS |
| CTAAAGCTCCCGCATACGCA+GGG | 0.605962 | 5_1:+22109587 | None:intergenic |
| CAGAGAGAGGAGATGCCGGT+TGG | 0.611433 | 5_1:+22110749 | None:intergenic |
| CATAAACTCCTTCCAACCTG+AGG | 0.612732 | 5_1:+22111730 | None:intergenic |
| AATACCATATGGGGATAGCA+AGG | 0.614242 | 5_1:+22111204 | None:intergenic |
| TTGATAAGGAGGACATGAAG+TGG | 0.616263 | 5_1:-22112078 | Msa0724030:CDS |
| TTTGAGTTTCGAAGCACCAA+GGG | 0.617215 | 5_1:+22112321 | None:intergenic |
| TCAGCAAAAGAAGTGATACT+GGG | 0.620176 | 5_1:-22112993 | Msa0724030:CDS |
| AATTGTTGCATATAGATGCA+TGG | 0.623174 | 5_1:+22111262 | None:intergenic |
| CCGATGTGTTTGACCCACGA+AGG | 0.626481 | 5_1:+22112758 | None:intergenic |
| TGATAAGGAGGACATGAAGT+GGG | 0.640881 | 5_1:-22112077 | Msa0724030:CDS |
| ATAAACTCCTTCCAACCTGA+GGG | 0.643381 | 5_1:+22111731 | None:intergenic |
| AACCTTGCTAACTCTGAACA+CGG | 0.653305 | 5_1:-22112052 | Msa0724030:CDS |
| GGTGGTTTATGGGTCACAGA+AGG | 0.656007 | 5_1:-22112031 | Msa0724030:CDS |
| ACGAGATGAAAACTTCATCA+GGG | 0.657064 | 5_1:-22112735 | Msa0724030:CDS |
| GCAGTAAACTGCGACACCAG+AGG | 0.662858 | 5_1:+22112823 | None:intergenic |
| CAGTACGTGTACGTGAAACA+GGG | 0.666987 | 5_1:-22110869 | Msa0724030:CDS |
| CGTACAATACACCAAATGGT+GGG | 0.668975 | 5_1:-22109623 | Msa0724030:CDS |
| AGATCACTCATAATTTCTCG+AGG | 0.676838 | 5_1:+22112103 | None:intergenic |
| TTCTAATAATGGTTTCAAGG+CGG | 0.680101 | 5_1:+22112438 | None:intergenic |
| AGACGCAGTCAAGTTTACTG+AGG | 0.688963 | 5_1:-22111816 | Msa0724030:CDS |
| CCTTCGTGGGTCAAACACAT+CGG | 0.689897 | 5_1:-22112758 | Msa0724030:CDS |
| TTACAGTATAGAGATTCTGA+CGG | 0.703557 | 5_1:-22112388 | Msa0724030:CDS |
| AGGTGCTGAAGAGTGCTGCA+AGG | 0.716768 | 5_1:-22112866 | Msa0724030:CDS |
| CTTGCTAACTCTGAACACGG+TGG | 0.759488 | 5_1:-22112049 | Msa0724030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTATTAAATACCATAT+GGG | + | chr5_1:22111420-22111439 | None:intergenic | 10.0% |
| !!! | AAATTTTATTAAATACCATA+TGG | + | chr5_1:22111421-22111440 | None:intergenic | 10.0% |
| !!! | TAAGTAGATTTTTTTTATTA+TGG | - | chr5_1:22111542-22111561 | Msa0724030:intron | 10.0% |
| !! | AATAAATTAACTTATTAAAC+TGG | - | chr5_1:22112396-22112415 | Msa0724030:CDS | 10.0% |
| !! | AATTAAAATATATAAGCAAA+TGG | + | chr5_1:22112686-22112705 | None:intergenic | 10.0% |
| !!! | ATTTTAATTTATTTTGATTG+CGG | - | chr5_1:22112697-22112716 | Msa0724030:CDS | 10.0% |
| !! | TATTATTATGTATTGAGAAA+AGG | + | chr5_1:22111047-22111066 | None:intergenic | 15.0% |
| !! | TTCAATTATAATAAACGAAA+TGG | + | chr5_1:22111114-22111133 | None:intergenic | 15.0% |
| !!! | TAAATAGACTTTTTAGAAAA+TGG | + | chr5_1:22111309-22111328 | None:intergenic | 15.0% |
| !!! | ATTTTATTAAATACCATATG+GGG | + | chr5_1:22111419-22111438 | None:intergenic | 15.0% |
| !! | TAAATATTCATGAAATGAAT+TGG | - | chr5_1:22112268-22112287 | Msa0724030:CDS | 15.0% |
| !! | TAATATTAAAATTACCTCAG+GGG | + | chr5_1:22111669-22111688 | None:intergenic | 20.0% |
| !! | GTAATATTAAAATTACCTCA+GGG | + | chr5_1:22111670-22111689 | None:intergenic | 20.0% |
| !!! | AGAATACACTTACATTTTTA+GGG | + | chr5_1:22111947-22111966 | None:intergenic | 20.0% |
| !!! | GTTTGTTAATGAATTTGATT+TGG | - | chr5_1:22112015-22112034 | Msa0724030:CDS | 20.0% |
| !!! | TTTCCATTAGAATGATTTTT+AGG | - | chr5_1:22112421-22112440 | Msa0724030:CDS | 20.0% |
| !! | TTGATCAATTTGAATTACAA+TGG | - | chr5_1:22112556-22112575 | Msa0724030:CDS | 20.0% |
| !!! | TATTTTGTAAAGTTTTACTG+TGG | + | chr5_1:22112832-22112851 | None:intergenic | 20.0% |
| !! | ACATGTTTAAATGTATTTGA+GGG | - | chr5_1:22112865-22112884 | Msa0724030:CDS | 20.0% |
| !! | AAGTTAATTGAGCAAAGTTT+TGG | - | chr5_1:22109920-22109939 | Msa0724030:intron | 25.0% |
| ! | AGAATTGCAGGAAAATTTAA+GGG | - | chr5_1:22110096-22110115 | Msa0724030:intron | 25.0% |
| !! | TTTTCGAACTCTTCTAATAA+TGG | + | chr5_1:22110187-22110206 | None:intergenic | 25.0% |
| ! | ATTAAAACAGTATATGAGAC+AGG | - | chr5_1:22110448-22110467 | Msa0724030:intron | 25.0% |
| !! | TGTATTAATATCTAAAGCTC+TGG | + | chr5_1:22110932-22110951 | None:intergenic | 25.0% |
| !!! | GACTTTTTAGAAAATGGAAT+CGG | + | chr5_1:22111303-22111322 | None:intergenic | 25.0% |
| ! | ATTTACAAAAGATGCATTCT+TGG | + | chr5_1:22111505-22111524 | None:intergenic | 25.0% |
| !! | AAGAATGCATCTTTTGTAAA+TGG | - | chr5_1:22111504-22111523 | Msa0724030:intron | 25.0% |
| !! | AGTCTTTTCACACAATTAAT+GGG | + | chr5_1:22111640-22111659 | None:intergenic | 25.0% |
| !! | TAGTCTTTTCACACAATTAA+TGG | + | chr5_1:22111641-22111660 | None:intergenic | 25.0% |
| ! | GGTAATATTAAAATTACCTC+AGG | + | chr5_1:22111671-22111690 | None:intergenic | 25.0% |
| !! | CAGAATACACTTACATTTTT+AGG | + | chr5_1:22111948-22111967 | None:intergenic | 25.0% |
| ! | TAACCCTAATCAAAACAAAA+AGG | - | chr5_1:22112059-22112078 | Msa0724030:CDS | 25.0% |
| ! | AACCCTAATCAAAACAAAAA+GGG | - | chr5_1:22112060-22112079 | Msa0724030:CDS | 25.0% |
| !!! | AACCCTTTTTGTTTTGATTA+GGG | + | chr5_1:22112065-22112084 | None:intergenic | 25.0% |
| !!! | AAACCCTTTTTGTTTTGATT+AGG | + | chr5_1:22112066-22112085 | None:intergenic | 25.0% |
| ! | TCAATCTAGGTAAAAAGTTA+TGG | + | chr5_1:22112160-22112179 | None:intergenic | 25.0% |
| !! | AAATTGAGGAATTGATAACA+GGG | - | chr5_1:22112201-22112220 | Msa0724030:CDS | 25.0% |
| ! | CATTTCATGAATATTTAACC+TGG | + | chr5_1:22112265-22112284 | None:intergenic | 25.0% |
| ! | TCTTGTAAAAGTTTCATCAT+TGG | - | chr5_1:22112319-22112338 | Msa0724030:CDS | 25.0% |
| ! | GAACTAAATATTGCATACTA+AGG | - | chr5_1:22112341-22112360 | Msa0724030:CDS | 25.0% |
| ! | CATCCTAAAAATCATTCTAA+TGG | + | chr5_1:22112427-22112446 | None:intergenic | 25.0% |
| ! | CTTATTAACTATACAAAGAG+TGG | + | chr5_1:22112454-22112473 | None:intergenic | 25.0% |
| ! | CTTATTAACTATACAAAGAG+TGG | + | chr5_1:22112454-22112473 | None:intergenic | 25.0% |
| ! | CAAATGATACAATAAGCAAA+TGG | + | chr5_1:22112603-22112622 | None:intergenic | 25.0% |
| !! | ACCTTATACCTTTCAATTTT+AGG | - | chr5_1:22112787-22112806 | Msa0724030:CDS | 25.0% |
| ! | CACATGTTTAAATGTATTTG+AGG | - | chr5_1:22112864-22112883 | Msa0724030:CDS | 25.0% |
| ! | CATGTTTAAATGTATTTGAG+GGG | - | chr5_1:22112866-22112885 | Msa0724030:CDS | 25.0% |
| AAGCCATAGATAGAAAAAGT+AGG | - | chr5_1:22110038-22110057 | Msa0724030:intron | 30.0% | |
| !!! | CTTCCTACTTTTTCTATCTA+TGG | + | chr5_1:22110044-22110063 | None:intergenic | 30.0% |
| CATAGATAGAAAAAGTAGGA+AGG | - | chr5_1:22110042-22110061 | Msa0724030:intron | 30.0% | |
| CAGAATTGCAGGAAAATTTA+AGG | - | chr5_1:22110095-22110114 | Msa0724030:intron | 30.0% | |
| TTCTAATAATGGTTTCAAGG+CGG | + | chr5_1:22110176-22110195 | None:intergenic | 30.0% | |
| CTCTTCTAATAATGGTTTCA+AGG | + | chr5_1:22110179-22110198 | None:intergenic | 30.0% | |
| CTATACTGTAAGCACAAAAA+TGG | + | chr5_1:22110214-22110233 | None:intergenic | 30.0% | |
| TTACAGTATAGAGATTCTGA+CGG | - | chr5_1:22110223-22110242 | Msa0724030:intron | 30.0% | |
| TCGAAACTCAAAAACATGAT+CGG | - | chr5_1:22110301-22110320 | Msa0724030:intron | 30.0% | |
| ! | GATTCTTTTGCACTAAATTC+AGG | - | chr5_1:22110331-22110350 | Msa0724030:intron | 30.0% |
| GGTATCTATTTACAGAAAAG+TGG | - | chr5_1:22110425-22110444 | Msa0724030:intron | 30.0% | |
| CATTGAAATATTTCTCCTAG+TGG | + | chr5_1:22110967-22110986 | None:intergenic | 30.0% | |
| !!! | ATTAGTTTTACCGCATTAAG+AGG | + | chr5_1:22111155-22111174 | None:intergenic | 30.0% |
| TCATATCAAATGTTGTGCAA+TGG | + | chr5_1:22111190-22111209 | None:intergenic | 30.0% | |
| TTTGATATGAGCAACTGAAT+AGG | - | chr5_1:22111200-22111219 | Msa0724030:intron | 30.0% | |
| AATTGTTGCATATAGATGCA+TGG | + | chr5_1:22111352-22111371 | None:intergenic | 30.0% | |
| !! | TTTTCACACAATTAATGGGT+AGG | + | chr5_1:22111636-22111655 | None:intergenic | 30.0% |
| AGAAAAGATGGAATGAAAGT+GGG | + | chr5_1:22111715-22111734 | None:intergenic | 30.0% | |
| AAACAAAGTCAATTCTCCAT+TGG | - | chr5_1:22111898-22111917 | Msa0724030:CDS | 30.0% | |
| GCAGATAAATCTTCAAATTG+AGG | - | chr5_1:22112187-22112206 | Msa0724030:CDS | 30.0% | |
| ! | CAAATTGAGGAATTGATAAC+AGG | - | chr5_1:22112200-22112219 | Msa0724030:CDS | 30.0% |
| TTTGTGCAAATATTTCTCAC+TGG | - | chr5_1:22112630-22112649 | Msa0724030:CDS | 30.0% | |
| ! | GCCTAAAATTGAAAGGTATA+AGG | + | chr5_1:22112791-22112810 | None:intergenic | 30.0% |
| ! | AGTATCACTTCTTTTGCTGA+GGG | + | chr5_1:22109618-22109637 | None:intergenic | 35.0% |
| TCAGCAAAAGAAGTGATACT+GGG | - | chr5_1:22109618-22109637 | Msa0724030:CDS | 35.0% | |
| GTTTACTGCTTCTAATGGTA+TGG | - | chr5_1:22109802-22109821 | Msa0724030:intron | 35.0% | |
| !!! | GGTATGGTTTTGAATCTTCT+TGG | - | chr5_1:22109818-22109837 | Msa0724030:intron | 35.0% |
| !!! | ATGGTTTTGAATCTTCTTGG+TGG | - | chr5_1:22109821-22109840 | Msa0724030:intron | 35.0% |
| !! | TTTTGAATCTTCTTGGTGGT+GGG | - | chr5_1:22109825-22109844 | Msa0724030:intron | 35.0% |
| ACGAGATGAAAACTTCATCA+GGG | - | chr5_1:22109876-22109895 | Msa0724030:intron | 35.0% | |
| AACTTCATCAGGGAAAACTT+TGG | - | chr5_1:22109886-22109905 | Msa0724030:intron | 35.0% | |
| TTTATCACAGCGACAATACA+AGG | - | chr5_1:22110066-22110085 | Msa0724030:intron | 35.0% | |
| ! | TTCAATTCCTGCTGTGTTTT+TGG | - | chr5_1:22110255-22110274 | Msa0724030:intron | 35.0% |
| ! | TCAATTCCTGCTGTGTTTTT+GGG | - | chr5_1:22110256-22110275 | Msa0724030:intron | 35.0% |
| CTACATGATATGATGGTACA+GGG | + | chr5_1:22110384-22110403 | None:intergenic | 35.0% | |
| AGATCACTCATAATTTCTCG+AGG | + | chr5_1:22110511-22110530 | None:intergenic | 35.0% | |
| TATGAGTGATCTCCTTGATA+AGG | - | chr5_1:22110519-22110538 | Msa0724030:intron | 35.0% | |
| ! | TAGCTTCTCTGAAAATGAAG+AGG | - | chr5_1:22110648-22110667 | Msa0724030:intron | 35.0% |
| AAGAAGATATCTCGTACTCA+AGG | - | chr5_1:22110748-22110767 | Msa0724030:CDS | 35.0% | |
| ATAGAACAAATTGAACCCTC+AGG | - | chr5_1:22110865-22110884 | Msa0724030:CDS | 35.0% | |
| ACACATGTGATATATCCACT+AGG | - | chr5_1:22110949-22110968 | Msa0724030:intron | 35.0% | |
| TAAAGTGGTTAGACGCATTT+AGG | + | chr5_1:22110999-22111018 | None:intergenic | 35.0% | |
| AAATGTCAAGAAGAGATGTG+GGG | + | chr5_1:22111023-22111042 | None:intergenic | 35.0% | |
| CAAATGTCAAGAAGAGATGT+GGG | + | chr5_1:22111024-22111043 | None:intergenic | 35.0% | |
| GTCAAAAAGGGATGAGAAAA+CGG | + | chr5_1:22111074-22111093 | None:intergenic | 35.0% | |
| ! | GTTTTCTCATCCCTTTTTGA+CGG | - | chr5_1:22111073-22111092 | Msa0724030:intron | 35.0% |
| CATAGTGTAACCGTCAAAAA+GGG | + | chr5_1:22111086-22111105 | None:intergenic | 35.0% | |
| ACATAGTGTAACCGTCAAAA+AGG | + | chr5_1:22111087-22111106 | None:intergenic | 35.0% | |
| TTGTTCTGTTCCTCTTAATG+CGG | - | chr5_1:22111142-22111161 | Msa0724030:intron | 35.0% | |
| GGAGAAATGTACTACTGTTA+TGG | - | chr5_1:22111221-22111240 | Msa0724030:CDS | 35.0% | |
| ACAAAAGATGCATTCTTGGT+AGG | + | chr5_1:22111501-22111520 | None:intergenic | 35.0% | |
| !! | ACTGTTGGTGATGTCTTATT+GGG | + | chr5_1:22111579-22111598 | None:intergenic | 35.0% |
| AAAAGACTATAATACCCCTG+AGG | - | chr5_1:22111652-22111671 | Msa0724030:intron | 35.0% | |
| GAGAAAAGATGGAATGAAAG+TGG | + | chr5_1:22111716-22111735 | None:intergenic | 35.0% | |
| ! | TGGAGAATTGACTTTGTTTC+TGG | + | chr5_1:22111897-22111916 | None:intergenic | 35.0% |
| ATCTGCAATCTGTTCAATCT+AGG | + | chr5_1:22112173-22112192 | None:intergenic | 35.0% | |
| CTGTCTACTAATGTTTATCC+AGG | - | chr5_1:22112244-22112263 | Msa0724030:CDS | 35.0% | |
| CAAATATTTCTCACTGGCAT+TGG | - | chr5_1:22112636-22112655 | Msa0724030:CDS | 35.0% | |
| ! | CCAGACAAAAAATAATGGGA+TGG | + | chr5_1:22112723-22112742 | None:intergenic | 35.0% |
| !!! | CCATCCCATTATTTTTTGTC+TGG | - | chr5_1:22112720-22112739 | Msa0724030:CDS | 35.0% |
| GGAGCCAGACAAAAAATAAT+GGG | + | chr5_1:22112727-22112746 | None:intergenic | 35.0% | |
| !! | GGTATTGGCCTAAAATTGAA+AGG | + | chr5_1:22112798-22112817 | None:intergenic | 35.0% |
| ! | TGTAAAGTTTTACTGTGGTG+TGG | + | chr5_1:22112827-22112846 | None:intergenic | 35.0% |
| TAAAGTTGTTGTCATGTGAC+TGG | - | chr5_1:22112907-22112926 | Msa0724030:CDS | 35.0% | |
| GAAATAACAGCTGTTCTAGC+AGG | + | chr5_1:22109593-22109612 | None:intergenic | 40.0% | |
| ! | CAGTATCACTTCTTTTGCTG+AGG | + | chr5_1:22109619-22109638 | None:intergenic | 40.0% |
| CTCAGCAAAAGAAGTGATAC+TGG | - | chr5_1:22109617-22109636 | Msa0724030:CDS | 40.0% | |
| ! | CAGTTCATTTGAGGTCAACA+AGG | + | chr5_1:22109648-22109667 | None:intergenic | 40.0% |
| ! | CATCTGAAGCAGTTCATTTG+AGG | + | chr5_1:22109657-22109676 | None:intergenic | 40.0% |
| CTCAAATGAACTGCTTCAGA+TGG | - | chr5_1:22109655-22109674 | Msa0724030:CDS | 40.0% | |
| !!! | TGCTGCAAGGTACTTTTTTC+TGG | - | chr5_1:22109758-22109777 | Msa0724030:intron | 40.0% |
| TCGCAGTTTACTGCTTCTAA+TGG | - | chr5_1:22109797-22109816 | Msa0724030:intron | 40.0% | |
| !! | GTTTTGAATCTTCTTGGTGG+TGG | - | chr5_1:22109824-22109843 | Msa0724030:intron | 40.0% |
| GACGAGATGAAAACTTCATC+AGG | - | chr5_1:22109875-22109894 | Msa0724030:intron | 40.0% | |
| GGAAAACTTTGGATGAAGCT+AGG | - | chr5_1:22109897-22109916 | Msa0724030:intron | 40.0% | |
| TGTTAGTAGCAGTGTTATGC+TGG | - | chr5_1:22109949-22109968 | Msa0724030:intron | 40.0% | |
| TAAGGGCAGAGAAACGTATT+AGG | - | chr5_1:22110113-22110132 | Msa0724030:intron | 40.0% | |
| AAGGGCAGAGAAACGTATTA+GGG | - | chr5_1:22110114-22110133 | Msa0724030:intron | 40.0% | |
| ! | TTTGAGTTTCGAAGCACCAA+GGG | + | chr5_1:22110293-22110312 | None:intergenic | 40.0% |
| !!! | TTTTGAGTTTCGAAGCACCA+AGG | + | chr5_1:22110294-22110313 | None:intergenic | 40.0% |
| GCTACATGATATGATGGTAC+AGG | + | chr5_1:22110385-22110404 | None:intergenic | 40.0% | |
| CCAAGAGCTACATGATATGA+TGG | + | chr5_1:22110391-22110410 | None:intergenic | 40.0% | |
| CCATCATATCATGTAGCTCT+TGG | - | chr5_1:22110388-22110407 | Msa0724030:intron | 40.0% | |
| ACTCATAATTTCTCGAGGTC+GGG | + | chr5_1:22110506-22110525 | None:intergenic | 40.0% | |
| CACTCATAATTTCTCGAGGT+CGG | + | chr5_1:22110507-22110526 | None:intergenic | 40.0% | |
| ACTTCATGTCCTCCTTATCA+AGG | + | chr5_1:22110534-22110553 | None:intergenic | 40.0% | |
| TTGATAAGGAGGACATGAAG+TGG | - | chr5_1:22110533-22110552 | Msa0724030:intron | 40.0% | |
| TGATAAGGAGGACATGAAGT+GGG | - | chr5_1:22110534-22110553 | Msa0724030:intron | 40.0% | |
| AACCTTGCTAACTCTGAACA+CGG | - | chr5_1:22110559-22110578 | Msa0724030:intron | 40.0% | |
| AGCGTGCAACTTTACTTCTT+TGG | + | chr5_1:22110723-22110742 | None:intergenic | 40.0% | |
| GATCCAAACGTCTGACTAAT+CGG | - | chr5_1:22110842-22110861 | Msa0724030:CDS | 40.0% | |
| ! | TATCCGATTAGTCAGACGTT+TGG | + | chr5_1:22110848-22110867 | None:intergenic | 40.0% |
| AACAAATTGAACCCTCAGGT+TGG | - | chr5_1:22110869-22110888 | Msa0724030:CDS | 40.0% | |
| ATAAACTCCTTCCAACCTGA+GGG | + | chr5_1:22110883-22110902 | None:intergenic | 40.0% | |
| GCAAATGTCAAGAAGAGATG+TGG | + | chr5_1:22111025-22111044 | None:intergenic | 40.0% | |
| TTTGACTAATGCACACTGGA+AGG | + | chr5_1:22111256-22111275 | None:intergenic | 40.0% | |
| TTCCAGTGTGCATTAGTCAA+AGG | - | chr5_1:22111255-22111274 | Msa0724030:CDS | 40.0% | |
| TTCCTTTGACTAATGCACAC+TGG | + | chr5_1:22111260-22111279 | None:intergenic | 40.0% | |
| AATACCATATGGGGATAGCA+AGG | + | chr5_1:22111410-22111429 | None:intergenic | 40.0% | |
| !! | CACTGTTGGTGATGTCTTAT+TGG | + | chr5_1:22111580-22111599 | None:intergenic | 40.0% |
| CAATAAGACATCACCAACAG+TGG | - | chr5_1:22111578-22111597 | Msa0724030:intron | 40.0% | |
| GGAATGAAAGTGGGATAGTT+GGG | + | chr5_1:22111706-22111725 | None:intergenic | 40.0% | |
| TGGAATGAAAGTGGGATAGT+TGG | + | chr5_1:22111707-22111726 | None:intergenic | 40.0% | |
| !! | TACTGGTTCTGGAGAAAAGA+TGG | + | chr5_1:22111727-22111746 | None:intergenic | 40.0% |
| ! | AATCGTTTTCTCTTCTCCCT+TGG | - | chr5_1:22111774-22111793 | Msa0724030:CDS | 40.0% |
| AGTAGAGAGATTGAGACCAA+TGG | + | chr5_1:22111917-22111936 | None:intergenic | 40.0% | |
| CTTTATCAGTGATCACGCAT+TGG | - | chr5_1:22112116-22112135 | Msa0724030:CDS | 40.0% | |
| CGGAGCCAGACAAAAAATAA+TGG | + | chr5_1:22112728-22112747 | None:intergenic | 40.0% | |
| !! | AAAGGTATAAGGTGCTGAGT+TGG | + | chr5_1:22112780-22112799 | None:intergenic | 40.0% |
| ATGTATTTGAGGGGTAACCT+TGG | - | chr5_1:22112875-22112894 | Msa0724030:CDS | 40.0% | |
| AGCCTCTTGTGTAAAAAGCA+GGG | - | chr5_1:22112957-22112976 | Msa0724030:CDS | 40.0% | |
| !!! | TACCCTGCTTTTTACACAAG+AGG | + | chr5_1:22112962-22112981 | None:intergenic | 40.0% |
| CTTGTGTAAAAAGCAGGGTA+AGG | - | chr5_1:22112962-22112981 | Msa0724030:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr5_1:22112988-22113007 | Msa0724030:CDS | 40.0% | |
| AATGAACTGCTTCAGATGGC+TGG | - | chr5_1:22109659-22109678 | Msa0724030:CDS | 45.0% | |
| ATGAACTGCTTCAGATGGCT+GGG | - | chr5_1:22109660-22109679 | Msa0724030:CDS | 45.0% | |
| !! | CGTAGAGGCATTGATGAAAG+TGG | - | chr5_1:22109692-22109711 | Msa0724030:intron | 45.0% |
| CTTCATTAGGAGTTTGGACG+AGG | + | chr5_1:22109727-22109746 | None:intergenic | 45.0% | |
| CTCGTCCAAACTCCTAATGA+AGG | - | chr5_1:22109725-22109744 | Msa0724030:intron | 45.0% | |
| CAGCACCTTCATTAGGAGTT+TGG | + | chr5_1:22109733-22109752 | None:intergenic | 45.0% | |
| CACTCTTCAGCACCTTCATT+AGG | + | chr5_1:22109740-22109759 | None:intergenic | 45.0% | |
| ! | TTTTTCTGGACTTGAGCCTC+TGG | - | chr5_1:22109772-22109791 | Msa0724030:intron | 45.0% |
| ! | TGTTATGCTGGCTGCTAAAG+AGG | - | chr5_1:22109961-22109980 | Msa0724030:intron | 45.0% |
| CAAGGAGATTGCAGAATTGC+AGG | - | chr5_1:22110084-22110103 | Msa0724030:intron | 45.0% | |
| !!! | TCCTGCTGTGTTTTTGGGAA+AGG | - | chr5_1:22110261-22110280 | Msa0724030:intron | 45.0% |
| ACCTTTCCCAAAAACACAGC+AGG | + | chr5_1:22110265-22110284 | None:intergenic | 45.0% | |
| CTCTTGGCTCAGATAACTCT+TGG | - | chr5_1:22110404-22110423 | Msa0724030:intron | 45.0% | |
| CCTTGAACTAACGGAACATC+GGG | + | chr5_1:22110478-22110497 | None:intergenic | 45.0% | |
| CCCTTGAACTAACGGAACAT+CGG | + | chr5_1:22110479-22110498 | None:intergenic | 45.0% | |
| CCGATGTTCCGTTAGTTCAA+GGG | - | chr5_1:22110476-22110495 | Msa0724030:intron | 45.0% | |
| CGATGTTCCGTTAGTTCAAG+GGG | - | chr5_1:22110477-22110496 | Msa0724030:intron | 45.0% | |
| GAGTGATCTCCTTGATAAGG+AGG | - | chr5_1:22110522-22110541 | Msa0724030:intron | 45.0% | |
| ACTCTGAACACGGTGGTTTA+TGG | - | chr5_1:22110569-22110588 | Msa0724030:intron | 45.0% | |
| CTCTGAACACGGTGGTTTAT+GGG | - | chr5_1:22110570-22110589 | Msa0724030:intron | 45.0% | |
| TCAGAGAAGCTACTCAAACC+TGG | + | chr5_1:22110640-22110659 | None:intergenic | 45.0% | |
| AGACGCAGTCAAGTTTACTG+AGG | - | chr5_1:22110795-22110814 | Msa0724030:CDS | 45.0% | |
| !! | AATTGAACCCTCAGGTTGGA+AGG | - | chr5_1:22110873-22110892 | Msa0724030:CDS | 45.0% |
| CATAAACTCCTTCCAACCTG+AGG | + | chr5_1:22110884-22110903 | None:intergenic | 45.0% | |
| AGGTTGGAAGGAGTTTATGC+AGG | - | chr5_1:22110885-22110904 | Msa0724030:intron | 45.0% | |
| GGTTAGACGCATTTAGGAGA+GGG | + | chr5_1:22110993-22111012 | None:intergenic | 45.0% | |
| TGGTTAGACGCATTTAGGAG+AGG | + | chr5_1:22110994-22111013 | None:intergenic | 45.0% | |
| GAAGAGATGTGGGGTTAAAG+TGG | + | chr5_1:22111014-22111033 | None:intergenic | 45.0% | |
| TAAGACATCACCAACAGTGG+CGG | - | chr5_1:22111581-22111600 | Msa0724030:intron | 45.0% | |
| ! | CACAATTAATGGGTAGGCCA+TGG | + | chr5_1:22111630-22111649 | None:intergenic | 45.0% |
| AAAGTGGGATAGTTGGGTAG+TGG | + | chr5_1:22111700-22111719 | None:intergenic | 45.0% | |
| CAGTACGTGTACGTGAAACA+GGG | - | chr5_1:22111742-22111761 | Msa0724030:CDS | 45.0% | |
| ! | CTGGAGATTGATTCAGAGAG+AGG | + | chr5_1:22111878-22111897 | None:intergenic | 45.0% |
| !! | GATCACGCATTGGCTACAAA+TGG | - | chr5_1:22112126-22112145 | Msa0724030:CDS | 45.0% |
| !! | GCATTGGCTACAAATGGAAC+AGG | - | chr5_1:22112132-22112151 | Msa0724030:CDS | 45.0% |
| !! | ATAGCCATGTTGGTGATCAG+TGG | + | chr5_1:22112751-22112770 | None:intergenic | 45.0% |
| TGATCACCAACATGGCTATC+AGG | - | chr5_1:22112752-22112771 | Msa0724030:CDS | 45.0% | |
| TTGGATCCTGATAGCCATGT+TGG | + | chr5_1:22112761-22112780 | None:intergenic | 45.0% | |
| TTTACTGTGGTGTGGCTTAG+TGG | + | chr5_1:22112819-22112838 | None:intergenic | 45.0% | |
| GTTGTTGTCATGTGACTGGA+AGG | - | chr5_1:22112911-22112930 | Msa0724030:CDS | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr5_1:22112951-22112970 | None:intergenic | 45.0% |
| CAGCCTCTTGTGTAAAAAGC+AGG | - | chr5_1:22112956-22112975 | Msa0724030:CDS | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr5_1:22112984-22113003 | Msa0724030:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr5_1:22112987-22113006 | Msa0724030:CDS | 45.0% | |
| CGATGTGTTTGACCCACGAA+GGG | + | chr5_1:22109855-22109874 | None:intergenic | 50.0% | |
| CCTTCGTGGGTCAAACACAT+CGG | - | chr5_1:22109853-22109872 | Msa0724030:intron | 50.0% | |
| GGCTGAATTGCGAAGACAGA+AGG | - | chr5_1:22110135-22110154 | Msa0724030:intron | 50.0% | |
| CCCGATGTTCCGTTAGTTCA+AGG | - | chr5_1:22110475-22110494 | Msa0724030:intron | 50.0% | |
| CGGGTATCCCCTTGAACTAA+CGG | + | chr5_1:22110487-22110506 | None:intergenic | 50.0% | |
| CACCGTGTTCAGAGTTAGCA+AGG | + | chr5_1:22110564-22110583 | None:intergenic | 50.0% | |
| CTTGCTAACTCTGAACACGG+TGG | - | chr5_1:22110562-22110581 | Msa0724030:intron | 50.0% | |
| GGTGGTTTATGGGTCACAGA+AGG | - | chr5_1:22110580-22110599 | Msa0724030:intron | 50.0% | |
| ATGGGTCACAGAAGGATCTC+TGG | - | chr5_1:22110588-22110607 | Msa0724030:intron | 50.0% | |
| ! | CAGAAGGATCTCTGGAGACA+TGG | - | chr5_1:22110596-22110615 | Msa0724030:intron | 50.0% |
| ! | GATCTCTGGAGACATGGTCT+TGG | - | chr5_1:22110602-22110621 | Msa0724030:intron | 50.0% |
| TCTTGGAGCTTGAACGTTCC+AGG | - | chr5_1:22110619-22110638 | Msa0724030:intron | 50.0% | |
| ! | ATAGTTGGGTAGTGGCATGG+TGG | + | chr5_1:22111692-22111711 | None:intergenic | 50.0% |
| !! | TCACGTACACGTACTGGTTC+TGG | + | chr5_1:22111738-22111757 | None:intergenic | 50.0% |
| CCTGTTTCACGTACACGTAC+TGG | + | chr5_1:22111744-22111763 | None:intergenic | 50.0% | |
| CCAGTACGTGTACGTGAAAC+AGG | - | chr5_1:22111741-22111760 | Msa0724030:CDS | 50.0% | |
| ! | TTGGTAAGTTCGCCGATTGC+GGG | + | chr5_1:22111846-22111865 | None:intergenic | 50.0% |
| ! | GTTGGTAAGTTCGCCGATTG+CGG | + | chr5_1:22111847-22111866 | None:intergenic | 50.0% |
| CAATCGGCGAACTTACCAAC+CGG | - | chr5_1:22111847-22111866 | Msa0724030:CDS | 50.0% | |
| GATTCAGAGAGAGGAGATGC+CGG | + | chr5_1:22111869-22111888 | None:intergenic | 50.0% | |
| GTGGTGTGGCTTAGTGGTAT+TGG | + | chr5_1:22112813-22112832 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr5_1:22112895-22112914 | None:intergenic | 50.0% | |
| GTCATGTGACTGGAAGGTCA+CGG | - | chr5_1:22112917-22112936 | Msa0724030:CDS | 50.0% | |
| TCATGTGACTGGAAGGTCAC+GGG | - | chr5_1:22112918-22112937 | Msa0724030:CDS | 50.0% | |
| !! | AGGTGCTGAAGAGTGCTGCA+AGG | - | chr5_1:22109745-22109764 | Msa0724030:intron | 55.0% |
| GCAGTAAACTGCGACACCAG+AGG | + | chr5_1:22109791-22109810 | None:intergenic | 55.0% | |
| CCGATGTGTTTGACCCACGA+AGG | + | chr5_1:22109856-22109875 | None:intergenic | 55.0% | |
| ! | TTGGGAAAGGTCGACTCCCT+TGG | - | chr5_1:22110274-22110293 | Msa0724030:intron | 55.0% |
| ! | GTCGCCTTGCTATCCCCATA+TGG | - | chr5_1:22111403-22111422 | Msa0724030:intron | 55.0% |
| ! | GGGATAGTTGGGTAGTGGCA+TGG | + | chr5_1:22111695-22111714 | None:intergenic | 55.0% |
| TCCGCCACTGATCACCAACA+TGG | - | chr5_1:22112744-22112763 | Msa0724030:CDS | 55.0% | |
| !! | GCCATGTTGGTGATCAGTGG+CGG | + | chr5_1:22112748-22112767 | None:intergenic | 55.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr5_1:22112930-22112949 | Msa0724030:CDS | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | + | chr5_1:22113027-22113046 | None:intergenic | 55.0% | |
| TTCAGATGGCTGGGCGTGCT+GGG | - | chr5_1:22109669-22109688 | Msa0724030:CDS | 60.0% | |
| ! | GTGGTGGGAAAGCCCTTCGT+GGG | - | chr5_1:22109840-22109859 | Msa0724030:intron | 60.0% |
| GGGTGATGTCGCGCTTCCAA+GGG | + | chr5_1:22111793-22111812 | None:intergenic | 60.0% | |
| TGGGTGATGTCGCGCTTCCA+AGG | + | chr5_1:22111794-22111813 | None:intergenic | 60.0% | |
| ATTGCAGTGGCGGTGGGTGA+AGG | + | chr5_1:22111823-22111842 | None:intergenic | 60.0% | |
| CGATTGCGGGATTGCAGTGG+CGG | + | chr5_1:22111833-22111852 | None:intergenic | 60.0% | |
| CGCCACTGCAATCCCGCAAT+CGG | - | chr5_1:22111831-22111850 | Msa0724030:CDS | 60.0% | |
| CAGAGAGAGGAGATGCCGGT+TGG | + | chr5_1:22111865-22111884 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr5_1:22112884-22112903 | Msa0724030:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr5_1:22113000-22113019 | Msa0724030:CDS | 60.0% |
| CTTCAGATGGCTGGGCGTGC+TGG | - | chr5_1:22109668-22109687 | Msa0724030:CDS | 65.0% | |
| !! | GGTGGTGGGAAAGCCCTTCG+TGG | - | chr5_1:22109839-22109858 | Msa0724030:intron | 65.0% |
| ACACGTGGCTCCGCCACTGT+TGG | + | chr5_1:22111594-22111613 | None:intergenic | 65.0% | |
| ! | AACAGTGGCGGAGCCACGTG+TGG | - | chr5_1:22111593-22111612 | Msa0724030:intron | 65.0% |
| TGCGGGATTGCAGTGGCGGT+GGG | + | chr5_1:22111829-22111848 | None:intergenic | 65.0% | |
| TTGCGGGATTGCAGTGGCGG+TGG | + | chr5_1:22111830-22111849 | None:intergenic | 65.0% | |
| ! | CGCCGATTGCGGGATTGCAG+TGG | + | chr5_1:22111836-22111855 | None:intergenic | 65.0% |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr5_1:22113002-22113021 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr5_1:22113015-22113034 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr5_1:22113016-22113035 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr5_1:22113015-22113034 | Msa0724030:CDS | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr5_1:22113016-22113035 | Msa0724030:CDS | 65.0% | |
| TGGCGGAGCCACGTGTGGAC+TGG | - | chr5_1:22111598-22111617 | Msa0724030:intron | 70.0% | |
| GGCGGAGCCACGTGTGGACT+GGG | - | chr5_1:22111599-22111618 | Msa0724030:intron | 70.0% | |
| ! | GCGGAGCCACGTGTGGACTG+GGG | - | chr5_1:22111600-22111619 | Msa0724030:intron | 70.0% |
| !! | AGCCACGTGTGGACTGGGGC+AGG | - | chr5_1:22111604-22111623 | Msa0724030:intron | 70.0% |
| !! | GTGTGGACTGGGGCAGGCCA+TGG | - | chr5_1:22111610-22111629 | Msa0724030:intron | 70.0% |
| ! | CGGTGGGTGAAGGTGGCGGT+GGG | + | chr5_1:22111813-22111832 | None:intergenic | 70.0% |
| GTGGCGGTGGGTGAAGGTGG+CGG | + | chr5_1:22111817-22111836 | None:intergenic | 70.0% | |
| GCAGTGGCGGTGGGTGAAGG+TGG | + | chr5_1:22111820-22111839 | None:intergenic | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr5_1:22113017-22113036 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr5_1:22113021-22113040 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr5_1:22113022-22113041 | None:intergenic | 70.0% | |
| GCTGGGCGTGCTGGGCGTAG+AGG | - | chr5_1:22109677-22109696 | Msa0724030:CDS | 75.0% | |
| GGCCTGCCCCAGTCCACACG+TGG | + | chr5_1:22111609-22111628 | None:intergenic | 75.0% | |
| ! | GCGGTGGGTGAAGGTGGCGG+TGG | + | chr5_1:22111814-22111833 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 22109587 | 22113046 | 22109587 | ID=Msa0724030;Name=Msa0724030 |
| chr5_1 | mRNA | 22109587 | 22113046 | 22109587 | ID=Msa0724030-mRNA-1;Parent=Msa0724030;Name=Msa0724030-mRNA-1;_AED=0.80;_eAED=0.80;_QI=0|0|0|0.25|1|1|4|0|575 |
| chr5_1 | exon | 22111727 | 22113046 | 22111727 | ID=Msa0724030-mRNA-1:exon:8424;Parent=Msa0724030-mRNA-1 |
| chr5_1 | exon | 22111209 | 22111287 | 22111209 | ID=Msa0724030-mRNA-1:exon:8423;Parent=Msa0724030-mRNA-1 |
| chr5_1 | exon | 22110680 | 22110894 | 22110680 | ID=Msa0724030-mRNA-1:exon:8422;Parent=Msa0724030-mRNA-1 |
| chr5_1 | exon | 22109587 | 22109700 | 22109587 | ID=Msa0724030-mRNA-1:exon:8421;Parent=Msa0724030-mRNA-1 |
| chr5_1 | CDS | 22111727 | 22113046 | 22111727 | ID=Msa0724030-mRNA-1:cds;Parent=Msa0724030-mRNA-1 |
| chr5_1 | CDS | 22111209 | 22111287 | 22111209 | ID=Msa0724030-mRNA-1:cds;Parent=Msa0724030-mRNA-1 |
| chr5_1 | CDS | 22110680 | 22110894 | 22110680 | ID=Msa0724030-mRNA-1:cds;Parent=Msa0724030-mRNA-1 |
| chr5_1 | CDS | 22109587 | 22109700 | 22109587 | ID=Msa0724030-mRNA-1:cds;Parent=Msa0724030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
