AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0726030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0726030 MtrunA17_Chr5g0417791 93.040 273 6 1 1 273 1 260 0.0 526
Msa0726030 MtrunA17_Chr4g0042561 73.518 253 56 5 2 252 8 251 7.05e-136 384
Msa0726030 MtrunA17_Chr2g0326361 66.471 170 55 1 3 170 14 183 3.59e-82 249
Msa0726030 MtrunA17_Chr7g0252971 49.632 272 110 6 3 251 8 275 1.92e-80 246
Msa0726030 MtrunA17_Chr2g0318101 65.680 169 47 3 3 161 15 182 3.58e-79 243
Msa0726030 MtrunA17_Chr7g0263931 60.417 192 72 2 1 188 9 200 3.85e-77 237
Msa0726030 MtrunA17_Chr4g0047841 61.582 177 47 2 2 157 14 190 5.39e-77 237
Msa0726030 MtrunA17_Chr8g0384721 46.970 264 114 6 1 240 5 266 5.19e-75 230
Msa0726030 MtrunA17_Chr3g0124761 59.459 185 66 4 1 185 5 180 5.57e-74 228
Msa0726030 MtrunA17_Chr8g0359921 61.875 160 59 1 1 160 12 169 3.16e-71 222
Msa0726030 MtrunA17_Chr2g0318081 63.226 155 53 1 1 155 14 164 6.28e-70 219
Msa0726030 MtrunA17_Chr3g0130731 60.000 165 64 2 1 165 5 167 1.38e-69 216
Msa0726030 MtrunA17_Chr6g0481091 50.000 188 87 3 3 187 6 189 2.30e-59 189
Msa0726030 MtrunA17_Chr8g0361731 40.076 262 134 6 5 247 16 273 3.12e-59 193
Msa0726030 MtrunA17_Chr4g0060931 44.351 239 112 6 1 235 15 236 3.14e-59 192
Msa0726030 MtrunA17_Chr2g0309891 55.030 169 70 4 1 167 4 168 3.81e-59 191
Msa0726030 MtrunA17_Chr5g0417001 47.692 195 89 5 5 189 16 207 1.11e-57 189
Msa0726030 MtrunA17_Chr6g0484441 53.165 158 68 1 3 160 5 156 2.66e-57 186
Msa0726030 MtrunA17_Chr6g0453451 50.000 172 84 1 2 173 19 188 3.08e-57 186
Msa0726030 MtrunA17_Chr7g0214071 57.595 158 56 4 1 156 13 161 2.38e-56 181
Msa0726030 MtrunA17_Chr3g0091921 55.484 155 67 1 1 155 14 166 4.09e-56 182
Msa0726030 MtrunA17_Chr2g0316971 53.797 158 69 2 2 157 22 177 4.13e-56 184
Msa0726030 MtrunA17_Chr2g0309331 50.299 167 73 3 1 163 8 168 6.04e-56 183
Msa0726030 MtrunA17_Chr6g0453131 50.000 174 81 3 2 169 14 187 7.41e-56 184
Msa0726030 MtrunA17_Chr8g0346001 39.526 253 136 4 2 244 14 259 1.97e-55 184
Msa0726030 MtrunA17_Chr4g0017921 50.549 182 75 3 3 176 8 182 2.17e-55 182
Msa0726030 MtrunA17_Chr4g0018391 47.090 189 87 4 3 184 7 189 7.11e-55 180
Msa0726030 MtrunA17_Chr8g0372121 46.111 180 87 3 3 179 6 178 7.58e-55 179
Msa0726030 MtrunA17_Chr3g0139331 45.146 206 95 4 3 206 11 200 1.14e-54 180
Msa0726030 MtrunA17_Chr1g0147421 50.829 181 68 6 3 177 27 192 2.11e-54 179
Msa0726030 MtrunA17_Chr5g0405211 50.318 157 69 2 3 156 8 158 6.07e-54 178
Msa0726030 MtrunA17_Chr7g0253011 51.220 164 74 2 1 160 15 176 7.46e-54 179
Msa0726030 MtrunA17_Chr4g0056541 49.689 161 72 2 2 159 6 160 9.12e-54 178
Msa0726030 MtrunA17_Chr3g0109821 53.125 160 70 4 1 158 4 160 2.43e-53 183
Msa0726030 MtrunA17_Chr6g0461661 51.250 160 74 2 1 158 16 173 5.98e-53 176
Msa0726030 MtrunA17_Chr1g0200561 51.282 156 67 2 3 155 19 168 1.78e-52 174
Msa0726030 MtrunA17_Chr5g0433781 52.500 160 70 2 1 158 4 159 2.07e-52 180
Msa0726030 MtrunA17_Chr5g0442771 38.589 241 129 5 5 227 20 259 8.83e-51 169
Msa0726030 MtrunA17_Chr7g0217721 45.087 173 84 1 1 162 17 189 4.15e-50 168
Msa0726030 MtrunA17_Chr5g0398971 44.809 183 88 5 3 178 7 183 4.57e-50 168
Msa0726030 MtrunA17_Chr1g0183741 47.097 155 72 2 3 155 10 156 1.23e-49 165
Msa0726030 MtrunA17_Chr2g0312321 49.351 154 73 3 2 155 10 158 2.27e-49 165
Msa0726030 MtrunA17_Chr4g0076731 47.305 167 74 3 5 170 56 209 1.51e-48 166
Msa0726030 MtrunA17_Chr2g0311651 49.412 170 71 5 5 161 24 191 1.78e-48 163
Msa0726030 MtrunA17_Chr8g0385991 51.592 157 71 3 3 156 14 168 3.58e-48 159
Msa0726030 MtrunA17_Chr5g0400461 50.617 162 64 3 3 155 6 160 1.08e-47 161
Msa0726030 MtrunA17_Chr2g0311661 50.610 164 67 4 5 155 23 185 3.15e-47 159
Msa0726030 MtrunA17_Chr7g0261411 46.405 153 72 2 3 153 10 154 5.20e-47 158
Msa0726030 MtrunA17_Chr3g0144271 57.364 129 52 2 3 128 23 151 8.07e-47 161
Msa0726030 MtrunA17_Chr3g0131911 50.311 161 72 3 2 156 13 171 3.29e-46 155
Msa0726030 MtrunA17_Chr4g0054791 49.112 169 75 4 3 165 6 169 3.68e-46 157
Msa0726030 MtrunA17_Chr5g0428991 46.392 194 86 4 2 188 24 206 5.98e-46 162
Msa0726030 MtrunA17_Chr7g0217711 53.846 130 60 0 1 130 17 146 8.11e-46 152
Msa0726030 MtrunA17_Chr1g0201021 47.771 157 76 2 1 155 17 169 1.72e-45 160
Msa0726030 MtrunA17_Chr4g0038751 48.148 162 72 2 5 163 17 169 2.16e-45 154
Msa0726030 MtrunA17_Chr3g0130101 47.403 154 75 2 5 156 9 158 1.10e-44 154
Msa0726030 MtrunA17_Chr1g0197351 49.375 160 77 2 3 158 42 201 1.87e-44 156
Msa0726030 MtrunA17_Chr3g0128151 50.000 162 65 3 3 157 22 174 6.50e-44 157
Msa0726030 MtrunA17_Chr1g0197361 47.742 155 71 4 5 155 10 158 2.32e-42 152
Msa0726030 MtrunA17_Chr3g0128111 46.296 162 79 3 6 165 45 200 5.13e-42 144
Msa0726030 MtrunA17_Chr8g0364791 45.223 157 80 3 2 156 5 157 5.76e-41 146
Msa0726030 MtrunA17_Chr3g0092671 46.452 155 73 5 5 155 7 155 1.13e-40 147
Msa0726030 MtrunA17_Chr8g0384201 43.312 157 83 4 2 156 5 157 6.54e-38 139
Msa0726030 MtrunA17_Chr2g0321631 43.949 157 80 4 4 153 5 160 3.60e-37 132
Msa0726030 MtrunA17_Chr4g0026141 44.654 159 77 5 3 153 5 160 6.69e-37 131
Msa0726030 MtrunA17_Chr3g0113001 55.046 109 48 1 52 160 14 121 4.05e-36 130
Msa0726030 MtrunA17_Chr7g0266701 39.766 171 91 5 3 163 4 172 5.88e-36 129
Msa0726030 MtrunA17_Chr4g0050701 39.490 157 83 3 3 155 11 159 3.28e-35 125
Msa0726030 MtrunA17_Chr2g0321741 41.611 149 74 3 34 181 23 159 7.60e-34 125
Msa0726030 MtrunA17_Chr8g0345671 44.231 156 72 7 2 152 10 155 1.63e-32 123
Msa0726030 MtrunA17_Chr8g0345711 40.625 160 82 7 3 150 12 170 3.30e-30 111
Msa0726030 MtrunA17_Chr8g0384351 41.026 156 68 5 1 156 8 139 3.60e-29 109
Msa0726030 MtrunA17_Chr3g0113031 54.255 94 43 0 67 160 4 97 3.83e-29 111
Msa0726030 MtrunA17_Chr8g0345691 44.697 132 63 6 3 127 12 140 1.92e-27 109
Msa0726030 MtrunA17_Chr8g0345731 43.939 132 67 5 3 127 24 155 2.65e-27 103
Msa0726030 MtrunA17_Chr3g0130321 32.461 191 103 8 1 181 5 179 4.51e-26 101
Msa0726030 MtrunA17_Chr8g0345721 39.103 156 60 6 6 127 38 192 5.79e-25 99.0
Msa0726030 MtrunA17_Chr8g0345741 43.697 119 61 5 14 127 2 119 3.09e-23 92.8
Msa0726030 MtrunA17_Chr7g0243371 57.333 75 30 1 56 128 17 91 4.57e-23 91.3
Msa0726030 MtrunA17_Chr8g0345701 36.111 144 70 6 3 127 7 147 4.97e-19 82.0
Msa0726030 MtrunA17_Chr7g0251651 30.233 172 112 5 1 167 16 184 2.23e-18 80.9
Msa0726030 MtrunA17_Chr7g0251661 29.333 150 99 5 1 147 8 153 5.51e-17 76.3
Msa0726030 MtrunA17_Chr7g0251671 27.891 147 99 5 2 145 9 151 5.45e-15 70.9
Msa0726030 MtrunA17_Chr1g0168571 31.613 155 85 7 11 154 13 157 2.05e-11 63.2
Msa0726030 MtrunA17_Chr4g0040541 33.333 144 76 6 3 128 48 189 5.63e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0726030 AT1G69490.1 67.273 220 60 2 3 210 9 228 5.22e-111 321
Msa0726030 AT1G61110.1 69.325 163 41 3 2 155 15 177 6.63e-79 241
Msa0726030 AT3G04070.2 50.612 245 98 4 3 224 10 254 2.84e-77 238
Msa0726030 AT3G15510.1 62.791 172 53 3 7 168 21 191 9.05e-77 238
Msa0726030 AT3G04070.1 48.659 261 95 5 3 224 10 270 1.17e-76 237
Msa0726030 AT1G77450.1 61.212 165 62 2 1 165 8 170 1.39e-73 226
Msa0726030 AT1G01720.1 63.125 160 58 1 1 160 5 163 1.01e-72 224
Msa0726030 AT4G27410.2 50.000 218 90 4 1 203 12 225 1.75e-71 222
Msa0726030 AT3G15500.1 63.462 156 53 1 1 156 12 163 2.46e-71 222
Msa0726030 AT1G52890.1 63.057 157 54 1 1 157 12 164 4.52e-71 221
Msa0726030 AT5G63790.1 53.571 196 86 4 1 194 48 240 3.63e-70 219
Msa0726030 AT5G08790.1 56.111 180 77 2 1 179 5 183 3.77e-70 218
Msa0726030 AT5G63790.2 53.571 196 86 4 1 194 58 250 3.84e-70 219
Msa0726030 AT1G52880.1 66.258 163 47 2 7 161 21 183 3.06e-68 214
Msa0726030 AT4G27410.3 46.383 235 90 5 1 203 12 242 6.89e-67 211
Msa0726030 AT3G17730.1 51.955 179 80 2 3 179 6 180 7.72e-60 190
Msa0726030 AT5G07680.2 56.774 155 65 1 1 155 1 153 5.66e-59 190
Msa0726030 AT5G07680.1 56.774 155 65 1 1 155 15 167 6.15e-59 191
Msa0726030 AT5G39610.1 55.128 156 68 1 1 156 18 171 7.52e-59 189
Msa0726030 AT2G24430.2 55.000 160 65 2 3 160 16 170 1.04e-58 190
Msa0726030 AT2G24430.1 55.000 160 65 2 3 160 16 170 1.04e-58 190
Msa0726030 AT5G61430.1 55.484 155 67 1 1 155 14 166 6.12e-58 188
Msa0726030 AT3G18400.1 50.633 158 73 1 3 160 5 157 8.59e-57 185
Msa0726030 AT5G39820.1 45.366 205 90 4 5 187 22 226 9.53e-57 185
Msa0726030 AT2G33480.2 55.769 156 60 2 1 156 13 159 2.86e-56 182
Msa0726030 AT3G15170.1 54.545 165 70 3 3 165 20 181 3.63e-56 183
Msa0726030 AT5G13180.1 56.962 158 58 4 1 156 12 161 6.72e-56 181
Msa0726030 AT3G29035.1 53.846 156 70 1 1 156 22 175 1.37e-55 182
Msa0726030 AT2G33480.1 55.769 156 62 3 1 156 13 161 1.56e-55 180
Msa0726030 AT4G36160.1 48.256 172 80 2 3 171 10 175 1.79e-55 183
Msa0726030 AT4G36160.3 48.256 172 80 2 3 171 10 175 1.79e-55 183
Msa0726030 AT4G36160.2 48.256 172 80 2 3 171 14 179 1.85e-55 183
Msa0726030 AT5G53950.1 45.361 194 102 2 3 194 17 208 2.66e-55 182
Msa0726030 AT1G76420.1 51.235 162 72 3 3 162 22 178 3.18e-55 181
Msa0726030 AT1G79580.3 52.795 161 65 3 1 157 15 168 1.16e-54 181
Msa0726030 AT1G79580.5 52.795 161 65 3 1 157 15 168 1.16e-54 181
Msa0726030 AT1G79580.4 52.795 161 65 3 1 157 15 168 1.16e-54 181
Msa0726030 AT1G79580.2 52.795 161 65 3 1 157 15 168 1.16e-54 181
Msa0726030 AT1G79580.1 52.795 161 65 3 1 157 15 168 1.16e-54 181
Msa0726030 AT3G04060.1 46.117 206 99 5 1 205 18 212 1.35e-54 180
Msa0726030 AT1G65910.1 50.303 165 76 3 1 163 4 164 1.52e-54 186
Msa0726030 AT5G18270.2 44.762 210 109 4 1 209 19 222 1.92e-54 179
Msa0726030 AT4G10350.1 46.875 192 93 3 3 189 9 196 2.99e-54 179
Msa0726030 AT1G26870.1 52.410 166 68 3 3 159 16 179 3.21e-54 181
Msa0726030 AT5G18270.1 44.286 210 110 4 1 209 19 222 4.77e-54 178
Msa0726030 AT1G33280.1 52.795 161 66 2 3 160 8 161 4.81e-54 177
Msa0726030 AT2G18060.3 47.879 165 77 2 3 164 9 167 7.40e-54 179
Msa0726030 AT2G18060.1 47.879 165 77 2 3 164 9 167 7.40e-54 179
Msa0726030 AT2G46770.1 38.132 257 123 8 2 246 15 247 8.15e-54 178
Msa0726030 AT1G71930.2 48.718 156 71 2 3 155 9 158 2.37e-53 176
Msa0726030 AT1G71930.1 48.718 156 71 2 3 155 9 158 2.37e-53 176
Msa0726030 AT5G17260.1 54.140 157 67 2 1 155 4 157 2.80e-53 180
Msa0726030 AT1G32770.1 43.396 212 103 5 2 204 15 218 3.96e-53 176
Msa0726030 AT5G66300.1 50.000 158 71 2 3 157 12 164 1.07e-52 173
Msa0726030 AT2G43000.1 44.724 199 93 3 5 203 20 201 5.73e-52 171
Msa0726030 AT1G62700.1 50.633 158 69 2 2 156 6 157 7.18e-52 174
Msa0726030 AT1G62700.2 50.633 158 69 2 2 156 6 157 7.18e-52 174
Msa0726030 AT1G54330.1 51.592 157 67 2 1 155 4 153 1.05e-51 171
Msa0726030 AT5G62380.2 50.000 160 71 2 3 159 7 160 1.50e-51 172
Msa0726030 AT5G62380.1 50.000 160 71 2 3 159 7 160 1.50e-51 172
Msa0726030 AT1G12260.2 49.045 157 71 2 3 156 7 157 1.56e-51 172
Msa0726030 AT1G56010.2 48.387 155 78 2 2 155 18 171 1.58e-51 171
Msa0726030 AT3G03200.1 52.866 157 69 3 1 155 4 157 1.66e-51 175
Msa0726030 AT3G61910.1 39.500 200 107 4 2 189 10 207 2.82e-51 171
Msa0726030 AT1G12260.1 49.045 157 71 2 3 156 7 157 3.22e-51 172
Msa0726030 AT5G46590.1 54.375 160 65 4 3 158 6 161 2.11e-50 167
Msa0726030 AT3G10480.1 50.633 158 73 2 3 158 27 181 6.00e-50 171
Msa0726030 AT2G17040.1 47.514 181 80 3 5 182 8 176 1.69e-49 165
Msa0726030 AT2G02450.2 48.503 167 72 3 5 170 53 206 1.84e-49 168
Msa0726030 AT3G10480.2 51.266 158 71 3 3 158 27 180 1.98e-49 169
Msa0726030 AT2G02450.1 48.503 167 72 3 5 170 53 206 2.12e-49 167
Msa0726030 AT3G10490.1 50.000 158 74 2 3 158 27 181 2.68e-49 163
Msa0726030 AT4G17980.1 53.125 160 63 5 3 155 6 160 9.33e-49 162
Msa0726030 AT4G17980.2 53.125 160 63 5 3 155 6 160 1.23e-48 163
Msa0726030 AT5G46590.2 60.465 129 48 2 3 128 6 134 1.50e-48 162
Msa0726030 AT3G12977.1 46.405 153 79 2 3 155 18 167 6.40e-48 160
Msa0726030 AT3G10490.2 50.000 158 74 2 3 158 27 181 7.98e-48 165
Msa0726030 AT3G10500.1 49.677 155 72 2 3 155 9 159 1.57e-47 166
Msa0726030 AT1G32510.1 46.154 195 84 6 3 180 6 196 3.03e-46 156
Msa0726030 AT5G04410.1 49.032 155 73 2 3 155 9 159 5.02e-46 162
Msa0726030 AT4G28530.1 44.186 172 70 3 2 155 9 172 7.16e-46 157
Msa0726030 AT5G24590.2 46.927 179 78 4 3 173 13 182 8.97e-46 159
Msa0726030 AT3G44290.2 49.007 151 65 2 5 154 16 155 6.00e-45 151
Msa0726030 AT1G34190.1 55.556 126 54 1 5 128 18 143 6.06e-45 159
Msa0726030 AT3G10480.3 42.408 191 72 3 3 158 27 214 7.32e-45 159
Msa0726030 AT3G12910.1 41.509 212 108 6 5 201 23 233 1.11e-44 153
Msa0726030 AT4G35580.3 50.625 160 63 3 3 155 9 159 1.33e-44 158
Msa0726030 AT4G35580.2 50.625 160 63 3 3 155 9 159 1.42e-44 158
Msa0726030 AT4G35580.1 50.625 160 63 3 3 155 9 159 1.54e-44 157
Msa0726030 AT2G27300.1 46.250 160 74 2 3 161 14 162 1.57e-44 154
Msa0726030 AT3G44290.1 49.007 151 65 2 5 154 16 155 3.35e-44 152
Msa0726030 AT1G34180.3 54.762 126 55 1 5 128 18 143 4.27e-44 155
Msa0726030 AT5G22290.1 48.052 154 67 3 5 156 23 165 1.61e-43 151
Msa0726030 AT1G34180.1 54.762 126 55 1 5 128 18 143 1.80e-43 155
Msa0726030 AT1G33060.1 49.032 155 73 2 3 155 24 174 1.84e-43 156
Msa0726030 AT1G33060.2 49.032 155 73 2 3 155 24 174 2.08e-43 156
Msa0726030 AT3G49530.2 42.424 198 98 5 3 188 13 206 6.69e-43 151
Msa0726030 AT3G49530.1 42.424 198 98 5 3 188 13 206 1.21e-42 152
Msa0726030 AT1G34180.4 50.725 138 54 2 5 128 18 155 3.78e-42 150
Msa0726030 AT5G09330.5 46.203 158 75 3 2 155 5 156 1.29e-41 149
Msa0726030 AT5G09330.2 46.203 158 75 3 2 155 5 156 1.29e-41 149
Msa0726030 AT5G09330.4 46.203 158 75 3 2 155 5 156 1.29e-41 149
Msa0726030 AT5G09330.3 46.203 158 75 3 2 155 5 156 1.29e-41 149
Msa0726030 AT5G09330.1 46.203 158 75 3 2 155 5 156 1.29e-41 149
Msa0726030 AT1G34180.2 50.725 138 54 2 5 128 18 155 1.58e-41 150
Msa0726030 AT5G64060.1 44.937 158 81 3 3 158 6 159 1.90e-41 146
Msa0726030 AT1G32870.2 48.387 155 74 3 3 155 10 160 1.31e-40 147
Msa0726030 AT1G32870.1 48.387 155 74 3 3 155 10 160 1.50e-40 147
Msa0726030 AT1G32870.3 48.387 155 74 3 3 155 46 196 2.65e-40 147
Msa0726030 AT5G61430.2 54.808 104 45 1 52 155 2 103 3.68e-36 130
Msa0726030 AT1G56010.1 53.465 101 46 1 55 155 5 104 1.13e-35 128
Msa0726030 AT4G10350.2 47.059 136 66 2 56 189 18 149 1.53e-34 126
Msa0726030 AT5G04395.1 45.775 142 61 3 3 128 28 169 3.86e-34 122
Msa0726030 AT5G22380.1 36.181 199 111 7 2 186 4 200 1.04e-32 120
Msa0726030 AT5G64530.1 37.126 167 81 4 1 155 1 155 5.85e-32 117
Msa0726030 AT5G64530.2 42.308 130 61 3 1 128 1 118 1.43e-31 115
Msa0726030 AT2G33480.3 55.446 101 41 2 56 156 8 104 1.50e-31 116
Msa0726030 AT3G44350.2 38.690 168 94 5 2 163 4 168 1.51e-31 117
Msa0726030 AT3G12977.2 47.222 108 54 2 48 155 10 114 3.16e-31 116
Msa0726030 AT3G44350.1 43.284 134 70 3 2 129 4 137 4.08e-30 111
Msa0726030 AT4G28530.2 34.706 170 52 3 2 155 9 135 2.72e-29 113
Msa0726030 AT3G04420.2 44.615 130 68 2 1 126 1 130 3.24e-28 109
Msa0726030 AT3G04420.1 44.615 130 68 2 1 126 1 130 5.27e-28 110
Msa0726030 AT4G01550.1 43.411 129 67 3 6 128 7 135 7.89e-26 105
Msa0726030 AT2G43000.2 40.288 139 66 3 65 203 2 123 1.30e-24 98.2
Msa0726030 AT4G01520.1 31.193 218 132 7 1 209 2 210 2.35e-24 99.8
Msa0726030 AT1G02230.1 43.077 130 64 5 4 126 4 130 1.36e-23 98.6
Msa0726030 AT1G02220.1 42.308 130 68 3 1 126 1 127 2.01e-23 98.6
Msa0726030 AT5G14000.2 37.879 132 78 2 1 130 13 142 3.51e-23 93.2
Msa0726030 AT5G14000.1 33.750 160 93 4 1 157 13 162 4.09e-23 94.4
Msa0726030 AT4G01540.4 30.986 213 129 7 6 209 7 210 2.29e-22 95.5
Msa0726030 AT4G01540.2 30.986 213 129 7 6 209 7 210 2.66e-22 95.9
Msa0726030 AT1G02250.1 42.105 133 67 4 1 126 1 130 3.31e-22 94.7
Msa0726030 AT4G01540.3 30.986 213 129 7 6 209 7 210 3.52e-22 95.5
Msa0726030 AT4G01540.1 30.986 213 129 7 6 209 7 210 3.60e-22 95.9
Msa0726030 AT3G10490.4 49.398 83 39 1 76 158 2 81 2.83e-21 92.0
Msa0726030 AT3G10490.3 49.398 83 39 1 76 158 2 81 2.83e-21 92.0
Msa0726030 AT5G50820.1 36.029 136 75 5 1 132 15 142 1.10e-20 87.4
Msa0726030 AT3G56530.1 32.468 154 95 3 3 153 52 199 2.37e-20 89.0
Msa0726030 AT1G01010.1 40.141 142 65 6 1 127 1 137 5.55e-20 89.4
Msa0726030 AT2G18060.2 45.882 85 40 1 80 164 1 79 5.81e-20 87.4
Msa0726030 AT3G55210.1 33.140 172 93 5 3 160 11 174 6.02e-18 82.0
Msa0726030 AT5G22290.2 48.684 76 27 2 82 156 2 66 7.49e-16 75.5
Msa0726030 AT1G28470.1 30.000 170 88 7 3 142 77 245 5.61e-12 65.5
Msa0726030 AT3G04430.1 34.848 132 72 5 9 127 6 136 9.18e-12 63.2

Find 70 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCAACTGTTTCTGGTTAT+TGG 0.119301 5_1:-26208785 Msa0726030:CDS
CCAAATAGAGCAACTGTTTC+TGG 0.129186 5_1:-26208792 Msa0726030:CDS
ATGCATGAATATAGGTTAAT+TGG 0.177043 5_1:-26208648 Msa0726030:CDS
AGACAAGCCAATAGACAAAT+TGG 0.241711 5_1:-26208618 Msa0726030:CDS
CCAGAAACAGTTGCTCTATT+TGG 0.254998 5_1:+26208792 None:intergenic
GCTGCATAAGTGTTGTTATT+AGG 0.262745 5_1:+26207938 None:intergenic
TCTGATAATATTTGTGATAT+TGG 0.265842 5_1:+26208052 None:intergenic
TTTGGATACTTTCTTTCTCT+TGG 0.274152 5_1:+26208825 None:intergenic
TGGAACTCCCACCTGGCTTT+AGG 0.278073 5_1:-26209257 Msa0726030:CDS
CATGGACCCAATTTGTCTAT+TGG 0.281830 5_1:+26208611 None:intergenic
CTATTTGGTCTCACCCCATT+TGG 0.292598 5_1:+26208807 None:intergenic
AATTTATAGATATCCACTTC+TGG 0.300371 5_1:+26209153 None:intergenic
CAATCTGTCTTGATTCCCTT+TGG 0.309227 5_1:+26208675 None:intergenic
GTGAAACAAAATAGCAGCTT+TGG 0.314170 5_1:-26207896 Msa0726030:CDS
GTCATATTGATTTGATTTGT+TGG 0.344949 5_1:+26208163 None:intergenic
TTTAGTGGGTCTAAGCATAT+TGG 0.378176 5_1:-26208735 Msa0726030:CDS
ATTGGATTATGCATGAATAT+AGG 0.381580 5_1:-26208656 Msa0726030:CDS
TGATAATAGTGAACAAGAAT+TGG 0.393388 5_1:-26208131 Msa0726030:CDS
ATTTATAGATATCCACTTCT+GGG 0.409565 5_1:+26209154 None:intergenic
GAAGAACATCACAAAATCAT+TGG 0.420592 5_1:-26208203 Msa0726030:CDS
AGAGAAAGAAAGTATCCAAA+TGG 0.427350 5_1:-26208822 Msa0726030:CDS
TCTGTCTTGATTCCCTTTGG+TGG 0.433579 5_1:+26208678 None:intergenic
ATTCCCTTTGATCAAATACT+TGG 0.435870 5_1:+26207870 None:intergenic
GAGAAAGAAAGTATCCAAAT+GGG 0.443759 5_1:-26208821 Msa0726030:CDS
TCATATTGATTTGATTTGTT+GGG 0.445689 5_1:+26208164 None:intergenic
TGAAACAAAATAGCAGCTTT+GGG 0.456984 5_1:-26207895 Msa0726030:CDS
GTGTCATCAGCTAGATGATT+GGG 0.461412 5_1:-26208248 Msa0726030:intron
CCATATTCAAAAGATTAGTA+AGG 0.462105 5_1:+26208086 None:intergenic
TATTGGAGTTAAGAAAGCTT+TGG 0.462561 5_1:-26208718 Msa0726030:CDS
GGAACCAAGTATTTGATCAA+AGG 0.468921 5_1:-26207874 Msa0726030:CDS
TACTCAATGGAACTCCCACC+TGG 0.471880 5_1:-26209264 None:intergenic
CAAAGGGAATCAAGACAGAT+TGG 0.478450 5_1:-26208674 Msa0726030:CDS
GAACCAAGTATTTGATCAAA+GGG 0.480990 5_1:-26207873 Msa0726030:CDS
GGTTAAAAGGCTTACCCTCA+TGG 0.486344 5_1:+26208593 None:intergenic
TGTATTAATTTGAAATTCAA+AGG 0.488952 5_1:+26208012 None:intergenic
TCTGGTTATTGGAAAGCCAC+TGG 0.489239 5_1:-26208774 Msa0726030:CDS
TTAGTAAGGGAACATGTCCT+TGG 0.503531 5_1:+26208100 None:intergenic
AATGCAGATAAATCAGACTT+TGG 0.509380 5_1:-26208873 Msa0726030:intron
ACAGATAAATCAATCTTTAG+TGG 0.509909 5_1:-26208750 Msa0726030:CDS
ATAATTAGTTCCTCATCAGT+TGG 0.510932 5_1:+26209228 None:intergenic
CAGACTTTGGAGAAAATGAA+TGG 0.513025 5_1:-26208860 Msa0726030:CDS
GACAAGCCAATAGACAAATT+GGG 0.514183 5_1:-26208617 Msa0726030:CDS
TATCTATAAATTTGATCCAT+GGG 0.517370 5_1:-26209142 Msa0726030:CDS
TGCATCTATCATCCCAGAAG+TGG 0.526246 5_1:-26209166 Msa0726030:CDS
ATATCTATAAATTTGATCCA+TGG 0.529195 5_1:-26209143 Msa0726030:CDS
CAGATAAATCAATCTTTAGT+GGG 0.532258 5_1:-26208749 Msa0726030:CDS
TAGATGATTGGGTCTTATGT+AGG 0.538283 5_1:-26208237 Msa0726030:CDS
CCCCTTTGTAAAACCACAGA+TGG 0.539188 5_1:-26207969 Msa0726030:CDS
TACAAGGGTAGGCCACCAAA+GGG 0.558622 5_1:-26208690 Msa0726030:CDS
AAGAATTGGTGAAATTTCCA+AGG 0.561534 5_1:-26208117 Msa0726030:CDS
TGTGTCATCAGCTAGATGAT+TGG 0.567562 5_1:-26208249 Msa0726030:intron
TAGGTTTCATCCAACTGATG+AGG 0.573797 5_1:-26209238 Msa0726030:CDS
TTACAAGGGTAGGCCACCAA+AGG 0.577490 5_1:-26208691 Msa0726030:CDS
GTTGGATGAAACCTAAAGCC+AGG 0.578152 5_1:+26209246 None:intergenic
TATGTACCTGGTAATTCCCA+TGG 0.581301 5_1:+26209126 None:intergenic
ACTTCTGGGATGATAGATGC+AGG 0.582550 5_1:+26209168 None:intergenic
GATTGATTTATCTGTTCCAG+TGG 0.585467 5_1:+26208758 None:intergenic
CATATTCAAAAGATTAGTAA+GGG 0.590186 5_1:+26208087 None:intergenic
TTAGGCATTTCAACCATCTG+TGG 0.590855 5_1:+26207956 None:intergenic
TTTGATCCATGGGAATTACC+AGG 0.600723 5_1:-26209132 Msa0726030:intron
ATATCACAAATATTATCAGA+TGG 0.602546 5_1:-26208049 Msa0726030:CDS
TTTCAAATTAATACAGCACA+TGG 0.620955 5_1:-26208004 Msa0726030:CDS
GATGAAACCTAAAGCCAGGT+GGG 0.635594 5_1:+26209250 None:intergenic
CAAATTAATACAGCACATGG+TGG 0.638373 5_1:-26208001 Msa0726030:CDS
TAGACAAATTGGGTCCATGA+GGG 0.639673 5_1:-26208607 Msa0726030:intron
ATAGACAAATTGGGTCCATG+AGG 0.667001 5_1:-26208608 Msa0726030:CDS
AGAAAGAAAGTATCCAAATG+GGG 0.672302 5_1:-26208820 Msa0726030:CDS
GGGATGATAGATGCAGGACA+TGG 0.683727 5_1:+26209174 None:intergenic
GGATGAAACCTAAAGCCAGG+TGG 0.686087 5_1:+26209249 None:intergenic
GTGATGTTGCTTGATTACAA+AGG 0.686883 5_1:+26209199 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAACAATTAGATATATTTT+AGG + chr5_1:26208123-26208142 None:intergenic 10.0%
!!! TAAACAATTAGATATATTTT+AGG + chr5_1:26208123-26208142 None:intergenic 10.0%
!! AATATCAATTTATTATGTAG+AGG - chr5_1:26208192-26208211 Msa0726030:CDS 15.0%
!!! TAAGAATTTTGTTAATTTGA+AGG - chr5_1:26208768-26208787 Msa0726030:CDS 15.0%
!!! AAGAATTTTGTTAATTTGAA+GGG - chr5_1:26208769-26208788 Msa0726030:CDS 15.0%
!!! TGTATTAATTTGAAATTCAA+AGG + chr5_1:26209117-26209136 None:intergenic 15.0%
!! AATATCAATTTATTATGTAG+AGG - chr5_1:26208192-26208211 Msa0726030:CDS 15.0%
!!! TAAGAATTTTGTTAATTTGA+AGG - chr5_1:26208768-26208787 Msa0726030:CDS 15.0%
!!! AAGAATTTTGTTAATTTGAA+GGG - chr5_1:26208769-26208788 Msa0726030:CDS 15.0%
!!! TGTATTAATTTGAAATTCAA+AGG + chr5_1:26209117-26209136 None:intergenic 15.0%
!! ATATCTATAAATTTGATCCA+TGG - chr5_1:26207983-26208002 Msa0726030:CDS 20.0%
!! TATCTATAAATTTGATCCAT+GGG - chr5_1:26207984-26208003 Msa0726030:CDS 20.0%
!! CATATCAATTAAATTCGATA+AGG + chr5_1:26208034-26208053 None:intergenic 20.0%
!!! TGCGTAGAAATTTTTTATAT+CGG + chr5_1:26208063-26208082 None:intergenic 20.0%
!!! GACAATTTTAGATACTAAAT+TGG + chr5_1:26208703-26208722 None:intergenic 20.0%
!! AATCAAAGAAGAATCTTATT+CGG + chr5_1:26208795-26208814 None:intergenic 20.0%
!!! TCATATTGATTTGATTTGTT+GGG + chr5_1:26208965-26208984 None:intergenic 20.0%
!! CATATTCAAAAGATTAGTAA+GGG + chr5_1:26209042-26209061 None:intergenic 20.0%
!!! TCTTTTGAATATGGATTATA+TGG - chr5_1:26209049-26209068 Msa0726030:intron 20.0%
!!! CTTTTGAATATGGATTATAT+GGG - chr5_1:26209050-26209069 Msa0726030:intron 20.0%
!! TCTGATAATATTTGTGATAT+TGG + chr5_1:26209077-26209096 None:intergenic 20.0%
!! ATATCACAAATATTATCAGA+TGG - chr5_1:26209077-26209096 Msa0726030:intron 20.0%
!! ATATCTATAAATTTGATCCA+TGG - chr5_1:26207983-26208002 Msa0726030:CDS 20.0%
!! TATCTATAAATTTGATCCAT+GGG - chr5_1:26207984-26208003 Msa0726030:CDS 20.0%
!! CATATCAATTAAATTCGATA+AGG + chr5_1:26208034-26208053 None:intergenic 20.0%
!!! TGCGTAGAAATTTTTTATAT+CGG + chr5_1:26208063-26208082 None:intergenic 20.0%
!!! GACAATTTTAGATACTAAAT+TGG + chr5_1:26208703-26208722 None:intergenic 20.0%
!! AATCAAAGAAGAATCTTATT+CGG + chr5_1:26208795-26208814 None:intergenic 20.0%
!!! TCATATTGATTTGATTTGTT+GGG + chr5_1:26208965-26208984 None:intergenic 20.0%
!! CATATTCAAAAGATTAGTAA+GGG + chr5_1:26209042-26209061 None:intergenic 20.0%
!!! TCTTTTGAATATGGATTATA+TGG - chr5_1:26209049-26209068 Msa0726030:intron 20.0%
!!! CTTTTGAATATGGATTATAT+GGG - chr5_1:26209050-26209069 Msa0726030:intron 20.0%
!! TCTGATAATATTTGTGATAT+TGG + chr5_1:26209077-26209096 None:intergenic 20.0%
!! ATATCACAAATATTATCAGA+TGG - chr5_1:26209077-26209096 Msa0726030:intron 20.0%
! ATTTATAGATATCCACTTCT+GGG + chr5_1:26207975-26207994 None:intergenic 25.0%
! AATTTATAGATATCCACTTC+TGG + chr5_1:26207976-26207995 None:intergenic 25.0%
! CAATTTATTATGTAGAGGTT+TGG - chr5_1:26208197-26208216 Msa0726030:CDS 25.0%
! ACAGATAAATCAATCTTTAG+TGG - chr5_1:26208376-26208395 Msa0726030:intron 25.0%
! CAGATAAATCAATCTTTAGT+GGG - chr5_1:26208377-26208396 Msa0726030:intron 25.0%
!!! AAAGCTTTGGTATTTTACAA+GGG - chr5_1:26208421-26208440 Msa0726030:intron 25.0%
! ATTGGATTATGCATGAATAT+AGG - chr5_1:26208470-26208489 Msa0726030:intron 25.0%
! ATGCATGAATATAGGTTAAT+TGG - chr5_1:26208478-26208497 Msa0726030:intron 25.0%
!! GGAATTCTAAAAAGGTTAAA+AGG + chr5_1:26208549-26208568 None:intergenic 25.0%
!! CAAATCTTGGAATTCTAAAA+AGG + chr5_1:26208557-26208576 None:intergenic 25.0%
! AAGATTTACTCAACAAATCT+TGG + chr5_1:26208570-26208589 None:intergenic 25.0%
!! TTAAAATTTTCGACCTGATA+AGG + chr5_1:26208733-26208752 None:intergenic 25.0%
!!! GTCATATTGATTTGATTTGT+TGG + chr5_1:26208966-26208985 None:intergenic 25.0%
! TGATAATAGTGAACAAGAAT+TGG - chr5_1:26208995-26209014 Msa0726030:intron 25.0%
! CCATATTCAAAAGATTAGTA+AGG + chr5_1:26209043-26209062 None:intergenic 25.0%
!! CCTTACTAATCTTTTGAATA+TGG - chr5_1:26209040-26209059 Msa0726030:intron 25.0%
! TTTCAAATTAATACAGCACA+TGG - chr5_1:26209122-26209141 Msa0726030:intron 25.0%
! ATTTATAGATATCCACTTCT+GGG + chr5_1:26207975-26207994 None:intergenic 25.0%
! AATTTATAGATATCCACTTC+TGG + chr5_1:26207976-26207995 None:intergenic 25.0%
! CAATTTATTATGTAGAGGTT+TGG - chr5_1:26208197-26208216 Msa0726030:CDS 25.0%
! ACAGATAAATCAATCTTTAG+TGG - chr5_1:26208376-26208395 Msa0726030:intron 25.0%
! CAGATAAATCAATCTTTAGT+GGG - chr5_1:26208377-26208396 Msa0726030:intron 25.0%
!!! AAAGCTTTGGTATTTTACAA+GGG - chr5_1:26208421-26208440 Msa0726030:intron 25.0%
! ATTGGATTATGCATGAATAT+AGG - chr5_1:26208470-26208489 Msa0726030:intron 25.0%
! ATGCATGAATATAGGTTAAT+TGG - chr5_1:26208478-26208497 Msa0726030:intron 25.0%
!! GGAATTCTAAAAAGGTTAAA+AGG + chr5_1:26208549-26208568 None:intergenic 25.0%
!! CAAATCTTGGAATTCTAAAA+AGG + chr5_1:26208557-26208576 None:intergenic 25.0%
! AAGATTTACTCAACAAATCT+TGG + chr5_1:26208570-26208589 None:intergenic 25.0%
!! TTAAAATTTTCGACCTGATA+AGG + chr5_1:26208733-26208752 None:intergenic 25.0%
!!! GTCATATTGATTTGATTTGT+TGG + chr5_1:26208966-26208985 None:intergenic 25.0%
! TGATAATAGTGAACAAGAAT+TGG - chr5_1:26208995-26209014 Msa0726030:intron 25.0%
! CCATATTCAAAAGATTAGTA+AGG + chr5_1:26209043-26209062 None:intergenic 25.0%
!! CCTTACTAATCTTTTGAATA+TGG - chr5_1:26209040-26209059 Msa0726030:intron 25.0%
! TTTCAAATTAATACAGCACA+TGG - chr5_1:26209122-26209141 Msa0726030:intron 25.0%
ATAATTAGTTCCTCATCAGT+TGG + chr5_1:26207901-26207920 None:intergenic 30.0%
AATGCAGATAAATCAGACTT+TGG - chr5_1:26208253-26208272 Msa0726030:intron 30.0%
TTTGGATACTTTCTTTCTCT+TGG + chr5_1:26208304-26208323 None:intergenic 30.0%
!! AGAGAAAGAAAGTATCCAAA+TGG - chr5_1:26208304-26208323 Msa0726030:intron 30.0%
!! GAGAAAGAAAGTATCCAAAT+GGG - chr5_1:26208305-26208324 Msa0726030:intron 30.0%
!! AGAAAGAAAGTATCCAAATG+GGG - chr5_1:26208306-26208325 Msa0726030:intron 30.0%
TATTGGAGTTAAGAAAGCTT+TGG - chr5_1:26208408-26208427 Msa0726030:intron 30.0%
!! GAAAGCTTTGGTATTTTACA+AGG - chr5_1:26208420-26208439 Msa0726030:intron 30.0%
!! CTGATTAGTCTTGAAATTGT+AGG - chr5_1:26208590-26208609 Msa0726030:intron 30.0%
ATTGTCTTGTAAACCTTATC+AGG - chr5_1:26208717-26208736 Msa0726030:CDS 30.0%
GAAGAACATCACAAAATCAT+TGG - chr5_1:26208923-26208942 Msa0726030:intron 30.0%
AAGAATTGGTGAAATTTCCA+AGG - chr5_1:26209009-26209028 Msa0726030:intron 30.0%
TGAAACAAAATAGCAGCTTT+GGG - chr5_1:26209231-26209250 Msa0726030:CDS 30.0%
GAACCAAGTATTTGATCAAA+GGG - chr5_1:26209253-26209272 Msa0726030:CDS 30.0%
ATTCCCTTTGATCAAATACT+TGG + chr5_1:26209259-26209278 None:intergenic 30.0%
ATAATTAGTTCCTCATCAGT+TGG + chr5_1:26207901-26207920 None:intergenic 30.0%
AATGCAGATAAATCAGACTT+TGG - chr5_1:26208253-26208272 Msa0726030:intron 30.0%
TTTGGATACTTTCTTTCTCT+TGG + chr5_1:26208304-26208323 None:intergenic 30.0%
!! AGAGAAAGAAAGTATCCAAA+TGG - chr5_1:26208304-26208323 Msa0726030:intron 30.0%
!! GAGAAAGAAAGTATCCAAAT+GGG - chr5_1:26208305-26208324 Msa0726030:intron 30.0%
!! AGAAAGAAAGTATCCAAATG+GGG - chr5_1:26208306-26208325 Msa0726030:intron 30.0%
TATTGGAGTTAAGAAAGCTT+TGG - chr5_1:26208408-26208427 Msa0726030:intron 30.0%
!! GAAAGCTTTGGTATTTTACA+AGG - chr5_1:26208420-26208439 Msa0726030:intron 30.0%
!! CTGATTAGTCTTGAAATTGT+AGG - chr5_1:26208590-26208609 Msa0726030:intron 30.0%
ATTGTCTTGTAAACCTTATC+AGG - chr5_1:26208717-26208736 Msa0726030:CDS 30.0%
GAAGAACATCACAAAATCAT+TGG - chr5_1:26208923-26208942 Msa0726030:intron 30.0%
AAGAATTGGTGAAATTTCCA+AGG - chr5_1:26209009-26209028 Msa0726030:intron 30.0%
TGAAACAAAATAGCAGCTTT+GGG - chr5_1:26209231-26209250 Msa0726030:CDS 30.0%
GAACCAAGTATTTGATCAAA+GGG - chr5_1:26209253-26209272 Msa0726030:CDS 30.0%
ATTCCCTTTGATCAAATACT+TGG + chr5_1:26209259-26209278 None:intergenic 30.0%
! GTGATGTTGCTTGATTACAA+AGG + chr5_1:26207930-26207949 None:intergenic 35.0%
TTTATGCTGTCAGTTGTGAT+TGG - chr5_1:26208139-26208158 Msa0726030:CDS 35.0%
! CAGACTTTGGAGAAAATGAA+TGG - chr5_1:26208266-26208285 Msa0726030:intron 35.0%
! GATTGATTTATCTGTTCCAG+TGG + chr5_1:26208371-26208390 None:intergenic 35.0%
! TTTAGTGGGTCTAAGCATAT+TGG - chr5_1:26208391-26208410 Msa0726030:intron 35.0%
! CTTTGGTATTTTACAAGGGT+AGG - chr5_1:26208425-26208444 Msa0726030:intron 35.0%
AGACAAGCCAATAGACAAAT+TGG - chr5_1:26208508-26208527 Msa0726030:intron 35.0%
GACAAGCCAATAGACAAATT+GGG - chr5_1:26208509-26208528 Msa0726030:intron 35.0%
CATGCATGAACACAAAATCA+AGG + chr5_1:26208859-26208878 None:intergenic 35.0%
! TAGATGATTGGGTCTTATGT+AGG - chr5_1:26208889-26208908 Msa0726030:intron 35.0%
CAAATTAATACAGCACATGG+TGG - chr5_1:26209125-26209144 Msa0726030:intron 35.0%
!! ACCATCTGTGGTTTTACAAA+GGG + chr5_1:26209161-26209180 None:intergenic 35.0%
!! AACCATCTGTGGTTTTACAA+AGG + chr5_1:26209162-26209181 None:intergenic 35.0%
! GCTGCATAAGTGTTGTTATT+AGG + chr5_1:26209191-26209210 None:intergenic 35.0%
GTGAAACAAAATAGCAGCTT+TGG - chr5_1:26209230-26209249 Msa0726030:CDS 35.0%
GGAACCAAGTATTTGATCAA+AGG - chr5_1:26209252-26209271 Msa0726030:CDS 35.0%
! GTGATGTTGCTTGATTACAA+AGG + chr5_1:26207930-26207949 None:intergenic 35.0%
TTTATGCTGTCAGTTGTGAT+TGG - chr5_1:26208139-26208158 Msa0726030:CDS 35.0%
! CAGACTTTGGAGAAAATGAA+TGG - chr5_1:26208266-26208285 Msa0726030:intron 35.0%
! GATTGATTTATCTGTTCCAG+TGG + chr5_1:26208371-26208390 None:intergenic 35.0%
! TTTAGTGGGTCTAAGCATAT+TGG - chr5_1:26208391-26208410 Msa0726030:intron 35.0%
! CTTTGGTATTTTACAAGGGT+AGG - chr5_1:26208425-26208444 Msa0726030:intron 35.0%
AGACAAGCCAATAGACAAAT+TGG - chr5_1:26208508-26208527 Msa0726030:intron 35.0%
GACAAGCCAATAGACAAATT+GGG - chr5_1:26208509-26208528 Msa0726030:intron 35.0%
CATGCATGAACACAAAATCA+AGG + chr5_1:26208859-26208878 None:intergenic 35.0%
! TAGATGATTGGGTCTTATGT+AGG - chr5_1:26208889-26208908 Msa0726030:intron 35.0%
CAAATTAATACAGCACATGG+TGG - chr5_1:26209125-26209144 Msa0726030:intron 35.0%
!! ACCATCTGTGGTTTTACAAA+GGG + chr5_1:26209161-26209180 None:intergenic 35.0%
!! AACCATCTGTGGTTTTACAA+AGG + chr5_1:26209162-26209181 None:intergenic 35.0%
! GCTGCATAAGTGTTGTTATT+AGG + chr5_1:26209191-26209210 None:intergenic 35.0%
GTGAAACAAAATAGCAGCTT+TGG - chr5_1:26209230-26209249 Msa0726030:CDS 35.0%
GGAACCAAGTATTTGATCAA+AGG - chr5_1:26209252-26209271 Msa0726030:CDS 35.0%
TAGGTTTCATCCAACTGATG+AGG - chr5_1:26207888-26207907 Msa0726030:CDS 40.0%
TTTGATCCATGGGAATTACC+AGG - chr5_1:26207994-26208013 Msa0726030:CDS 40.0%
TATGTACCTGGTAATTCCCA+TGG + chr5_1:26208003-26208022 None:intergenic 40.0%
AAGGCGATAACATATGTACC+TGG + chr5_1:26208015-26208034 None:intergenic 40.0%
CCAGAAACAGTTGCTCTATT+TGG + chr5_1:26208337-26208356 None:intergenic 40.0%
CCAAATAGAGCAACTGTTTC+TGG - chr5_1:26208334-26208353 Msa0726030:intron 40.0%
!! GAGCAACTGTTTCTGGTTAT+TGG - chr5_1:26208341-26208360 Msa0726030:intron 40.0%
CAATCTGTCTTGATTCCCTT+TGG + chr5_1:26208454-26208473 None:intergenic 40.0%
CAAAGGGAATCAAGACAGAT+TGG - chr5_1:26208452-26208471 Msa0726030:intron 40.0%
CATGGACCCAATTTGTCTAT+TGG + chr5_1:26208518-26208537 None:intergenic 40.0%
ATAGACAAATTGGGTCCATG+AGG - chr5_1:26208518-26208537 Msa0726030:intron 40.0%
TAGACAAATTGGGTCCATGA+GGG - chr5_1:26208519-26208538 Msa0726030:intron 40.0%
TGTGTCATCAGCTAGATGAT+TGG - chr5_1:26208877-26208896 Msa0726030:intron 40.0%
GTGTCATCAGCTAGATGATT+GGG - chr5_1:26208878-26208897 Msa0726030:intron 40.0%
TTAGTAAGGGAACATGTCCT+TGG + chr5_1:26209029-26209048 None:intergenic 40.0%
!! CCATCTGTGGTTTTACAAAG+GGG + chr5_1:26209160-26209179 None:intergenic 40.0%
TTAGGCATTTCAACCATCTG+TGG + chr5_1:26209173-26209192 None:intergenic 40.0%
TAGGTTTCATCCAACTGATG+AGG - chr5_1:26207888-26207907 Msa0726030:CDS 40.0%
TTTGATCCATGGGAATTACC+AGG - chr5_1:26207994-26208013 Msa0726030:CDS 40.0%
TATGTACCTGGTAATTCCCA+TGG + chr5_1:26208003-26208022 None:intergenic 40.0%
AAGGCGATAACATATGTACC+TGG + chr5_1:26208015-26208034 None:intergenic 40.0%
CCAGAAACAGTTGCTCTATT+TGG + chr5_1:26208337-26208356 None:intergenic 40.0%
CCAAATAGAGCAACTGTTTC+TGG - chr5_1:26208334-26208353 Msa0726030:intron 40.0%
!! GAGCAACTGTTTCTGGTTAT+TGG - chr5_1:26208341-26208360 Msa0726030:intron 40.0%
CAATCTGTCTTGATTCCCTT+TGG + chr5_1:26208454-26208473 None:intergenic 40.0%
CAAAGGGAATCAAGACAGAT+TGG - chr5_1:26208452-26208471 Msa0726030:intron 40.0%
CATGGACCCAATTTGTCTAT+TGG + chr5_1:26208518-26208537 None:intergenic 40.0%
ATAGACAAATTGGGTCCATG+AGG - chr5_1:26208518-26208537 Msa0726030:intron 40.0%
TAGACAAATTGGGTCCATGA+GGG - chr5_1:26208519-26208538 Msa0726030:intron 40.0%
TGTGTCATCAGCTAGATGAT+TGG - chr5_1:26208877-26208896 Msa0726030:intron 40.0%
GTGTCATCAGCTAGATGATT+GGG - chr5_1:26208878-26208897 Msa0726030:intron 40.0%
TTAGTAAGGGAACATGTCCT+TGG + chr5_1:26209029-26209048 None:intergenic 40.0%
!! CCATCTGTGGTTTTACAAAG+GGG + chr5_1:26209160-26209179 None:intergenic 40.0%
TTAGGCATTTCAACCATCTG+TGG + chr5_1:26209173-26209192 None:intergenic 40.0%
GATGAAACCTAAAGCCAGGT+GGG + chr5_1:26207879-26207898 None:intergenic 45.0%
GTTGGATGAAACCTAAAGCC+AGG + chr5_1:26207883-26207902 None:intergenic 45.0%
!! ACTTCTGGGATGATAGATGC+AGG + chr5_1:26207961-26207980 None:intergenic 45.0%
TGCATCTATCATCCCAGAAG+TGG - chr5_1:26207960-26207979 Msa0726030:CDS 45.0%
CTATTTGGTCTCACCCCATT+TGG + chr5_1:26208322-26208341 None:intergenic 45.0%
TCTGGTTATTGGAAAGCCAC+TGG - chr5_1:26208352-26208371 Msa0726030:intron 45.0%
TCTGTCTTGATTCCCTTTGG+TGG + chr5_1:26208451-26208470 None:intergenic 45.0%
GGTTAAAAGGCTTACCCTCA+TGG + chr5_1:26208536-26208555 None:intergenic 45.0%
CCCCTTTGTAAAACCACAGA+TGG - chr5_1:26209157-26209176 Msa0726030:CDS 45.0%
GATGAAACCTAAAGCCAGGT+GGG + chr5_1:26207879-26207898 None:intergenic 45.0%
GTTGGATGAAACCTAAAGCC+AGG + chr5_1:26207883-26207902 None:intergenic 45.0%
!! ACTTCTGGGATGATAGATGC+AGG + chr5_1:26207961-26207980 None:intergenic 45.0%
TGCATCTATCATCCCAGAAG+TGG - chr5_1:26207960-26207979 Msa0726030:CDS 45.0%
CTATTTGGTCTCACCCCATT+TGG + chr5_1:26208322-26208341 None:intergenic 45.0%
TCTGGTTATTGGAAAGCCAC+TGG - chr5_1:26208352-26208371 Msa0726030:intron 45.0%
TCTGTCTTGATTCCCTTTGG+TGG + chr5_1:26208451-26208470 None:intergenic 45.0%
GGTTAAAAGGCTTACCCTCA+TGG + chr5_1:26208536-26208555 None:intergenic 45.0%
CCCCTTTGTAAAACCACAGA+TGG - chr5_1:26209157-26209176 Msa0726030:CDS 45.0%
!! GATAAAATTATATATATAAT+TGG + chr5_1:26208091-26208110 None:intergenic 5.0%
!! GATAAAATTATATATATAAT+TGG + chr5_1:26208091-26208110 None:intergenic 5.0%
GGATGAAACCTAAAGCCAGG+TGG + chr5_1:26207880-26207899 None:intergenic 50.0%
GGGATGATAGATGCAGGACA+TGG + chr5_1:26207955-26207974 None:intergenic 50.0%
TTACAAGGGTAGGCCACCAA+AGG - chr5_1:26208435-26208454 Msa0726030:intron 50.0%
TACAAGGGTAGGCCACCAAA+GGG - chr5_1:26208436-26208455 Msa0726030:intron 50.0%
!! GGCGTCGAGCAGTTTGATTT+TGG - chr5_1:26208611-26208630 Msa0726030:CDS 50.0%
GGATGAAACCTAAAGCCAGG+TGG + chr5_1:26207880-26207899 None:intergenic 50.0%
GGGATGATAGATGCAGGACA+TGG + chr5_1:26207955-26207974 None:intergenic 50.0%
TTACAAGGGTAGGCCACCAA+AGG - chr5_1:26208435-26208454 Msa0726030:intron 50.0%
TACAAGGGTAGGCCACCAAA+GGG - chr5_1:26208436-26208455 Msa0726030:intron 50.0%
!! GGCGTCGAGCAGTTTGATTT+TGG - chr5_1:26208611-26208630 Msa0726030:CDS 50.0%
! TGGAACTCCCACCTGGCTTT+AGG - chr5_1:26207869-26207888 Msa0726030:CDS 55.0%
! TGGAACTCCCACCTGGCTTT+AGG - chr5_1:26207869-26207888 Msa0726030:CDS 55.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 26207868 26209280 26207868 ID=Msa0726030;Name=Msa0726030
chr5_1 mRNA 26207868 26209280 26207868 ID=Msa0726030-mRNA-1;Parent=Msa0726030;Name=Msa0726030-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.5|0|1|1|1|3|0|273
chr5_1 exon 26209133 26209280 26209133 ID=Msa0726030-mRNA-1:exon:9395;Parent=Msa0726030-mRNA-1
chr5_1 exon 26208608 26208888 26208608 ID=Msa0726030-mRNA-1:exon:9394;Parent=Msa0726030-mRNA-1
chr5_1 exon 26207868 26208260 26207868 ID=Msa0726030-mRNA-1:exon:9393;Parent=Msa0726030-mRNA-1
chr5_1 CDS 26209133 26209280 26209133 ID=Msa0726030-mRNA-1:cds;Parent=Msa0726030-mRNA-1
chr5_1 CDS 26208608 26208888 26208608 ID=Msa0726030-mRNA-1:cds;Parent=Msa0726030-mRNA-1
chr5_1 CDS 26207868 26208260 26207868 ID=Msa0726030-mRNA-1:cds;Parent=Msa0726030-mRNA-1
Gene Sequence

>Msa0726030

ATGGAACTCCCACCTGGCTTTAGGTTTCATCCAACTGATGAGGAACTAATTATGTATTACCTTTGTAATCAAGCAACATCACAACCATGTCCTGCATCTATCATCCCAGAAGTGGATATCTATAAATTTGATCCATGGGAATTACCAGATAAATCAGACTTTGGAGAAAATGAATGGTATTTTTTTACTCCAAGAGAAAGAAAGTATCCAAATGGGGTGAGACCAAATAGAGCAACTGTTTCTGGTTATTGGAAAGCCACTGGAACAGATAAATCAATCTTTAGTGGGTCTAAGCATATTGGAGTTAAGAAAGCTTTGGTATTTTACAAGGGTAGGCCACCAAAGGGAATCAAGACAGATTGGATTATGCATGAATATAGGTTAATTGGATCAAGAAGACAAGCCAATAGACAAATTGGGTCCATGAGGCTAGATGATTGGGTCTTATGTAGGATCTATAAGAAGAAGAACATCACAAAATCATTGGAGACAAATGAAGACTACCCAACAAATCAAATCAATATGACACAAACAAATGATAATAGTGAACAAGAATTGGTGAAATTTCCAAGGACATGTTCCCTTACTAATCTTTTGAATATGGATTATATGGGACCAATATCACAAATATTATCAGATGGATCATATAATTCAACCTTTGAATTTCAAATTAATACAGCACATGGTGGAACAATAGACCCCTTTGTAAAACCACAGATGGTTGAAATGCCTAATAACAACACTTATGCAGCTGATTTAGAGAAGTACAATGTGAAACAAAATAGCAGCTTTGGGAACCAAGTATTTGATCAAAGGGAATAA
Protein sequence

>Msa0726030

MELPPGFRFHPTDEELIMYYLCNQATSQPCPASIIPEVDIYKFDPWELPDKSDFGENEWYFFTPRERKYPNGVRPNRATVSGYWKATGTDKSIFSGSKHIGVKKALVFYKGRPPKGIKTDWIMHEYRLIGSRRQANRQIGSMRLDDWVLCRIYKKKNITKSLETNEDYPTNQINMTQTNDNSEQELVKFPRTCSLTNLLNMDYMGPISQILSDGSYNSTFEFQINTAHGGTIDPFVKPQMVEMPNNNTYAADLEKYNVKQNSSFGNQVFDQRE*