Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0728810 | XP_003617437.2 | 95.986 | 573 | 23 | 0 | 1 | 573 | 1 | 573 | 0.0 | 1101 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0728810 | G7KD68 | 95.986 | 573 | 23 | 0 | 1 | 573 | 1 | 573 | 0.0 | 1101 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0707390 | Msa0728810 | 0.800131 | 1.663852e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0728810 | MtrunA17_Chr5g0443251 | 95.986 | 573 | 23 | 0 | 1 | 573 | 1 | 573 | 0.0 | 1101 |
| Msa0728810 | MtrunA17_Chr2g0291631 | 63.992 | 511 | 161 | 4 | 49 | 553 | 33 | 526 | 0.0 | 664 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0728810 | AT1G29820.1 | 62.738 | 526 | 171 | 5 | 29 | 543 | 11 | 522 | 0.0 | 665 |
| Msa0728810 | AT1G29820.2 | 62.738 | 526 | 171 | 5 | 29 | 543 | 11 | 522 | 0.0 | 665 |
| Msa0728810 | AT2G42950.1 | 62.863 | 517 | 151 | 7 | 50 | 560 | 15 | 496 | 0.0 | 638 |
| Msa0728810 | AT2G42950.2 | 62.863 | 517 | 151 | 7 | 50 | 560 | 15 | 496 | 0.0 | 638 |
| Msa0728810 | AT1G29830.1 | 60.659 | 516 | 190 | 5 | 34 | 543 | 7 | 515 | 0.0 | 629 |
| Msa0728810 | AT1G29830.3 | 61.924 | 499 | 179 | 4 | 49 | 543 | 59 | 550 | 0.0 | 627 |
| Msa0728810 | AT1G29830.2 | 59.161 | 453 | 172 | 5 | 34 | 480 | 7 | 452 | 0.0 | 541 |
Find 165 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGGTTTACCTTTGAATT+TGG | 0.179232 | 5_1:-35104391 | None:intergenic |
| TCCATCATTACCGGACTATT+TGG | 0.209585 | 5_1:+35109496 | Msa0728810:CDS |
| TTTGAATTTGGATTCGAAAA+TGG | 0.242910 | 5_1:-35104379 | None:intergenic |
| ATGTCATCTTCCTCAATAAA+TGG | 0.251991 | 5_1:-35106316 | None:intergenic |
| TTGATAATCTTCTTATTTCC+TGG | 0.261369 | 5_1:-35108238 | None:intergenic |
| TGCCTTGAAAACCCTTCTTC+TGG | 0.261432 | 5_1:-35105441 | None:intergenic |
| TTCGATAACAATAACTGTTT+TGG | 0.276579 | 5_1:+35105562 | Msa0728810:CDS |
| CGCGGTCCGTGCATGGTTGC+AGG | 0.288023 | 5_1:+35109188 | Msa0728810:CDS |
| GGATTACTGTTTGAACTTCT+AGG | 0.293386 | 5_1:+35106277 | Msa0728810:CDS |
| GTATAAGCTGTAACATTTAG+AGG | 0.295815 | 5_1:-35109875 | None:intergenic |
| CACATAACTTGGGAGTGTTT+GGG | 0.295964 | 5_1:+35109455 | Msa0728810:CDS |
| CTCTGTTATCTTAGTTGTGT+TGG | 0.296937 | 5_1:+35109576 | Msa0728810:CDS |
| ATTGGTTTCCAGTAACTTCT+TGG | 0.304373 | 5_1:-35105598 | None:intergenic |
| CAGATGTAGCAACTCCTTAC+TGG | 0.307301 | 5_1:+35105725 | Msa0728810:CDS |
| ACACATAACTTGGGAGTGTT+TGG | 0.311377 | 5_1:+35109454 | Msa0728810:CDS |
| GGAATTGGATTGCTTTATCT+TGG | 0.311392 | 5_1:+35109613 | Msa0728810:CDS |
| TTGTTTCGTAAACACATCTT+TGG | 0.312526 | 5_1:+35108025 | Msa0728810:CDS |
| CTTTCATGAATTACCTTTAC+CGG | 0.315038 | 5_1:+35105504 | Msa0728810:CDS |
| CCAAGGATAACTTGCAGAAT+AGG | 0.336393 | 5_1:+35105329 | Msa0728810:CDS |
| CTTGTCCTTTCCATCATTAC+CGG | 0.343281 | 5_1:+35109487 | Msa0728810:CDS |
| TGTTTCGTAAACACATCTTT+GGG | 0.344303 | 5_1:+35108026 | Msa0728810:CDS |
| GAAGATTATTTAGCTTCATT+TGG | 0.344719 | 5_1:+35105262 | Msa0728810:CDS |
| AGCTTATACATAATGATGTT+TGG | 0.351638 | 5_1:+35109889 | Msa0728810:three_prime_UTR |
| TCTGTTATCTTAGTTGTGTT+GGG | 0.355276 | 5_1:+35109577 | Msa0728810:CDS |
| ACAACACTTTCTTCAATGAT+TGG | 0.366307 | 5_1:-35109646 | None:intergenic |
| ATGGCAGGCACAGAACTTTC+TGG | 0.369695 | 5_1:+35106357 | Msa0728810:CDS |
| GGAGCAGTGCTAATTGGAAT+TGG | 0.375370 | 5_1:+35109598 | Msa0728810:CDS |
| GAATTGGATTGCTTTATCTT+GGG | 0.377049 | 5_1:+35109614 | Msa0728810:CDS |
| TCCAATCTGGTGGTGTCATT+TGG | 0.380988 | 5_1:+35105762 | Msa0728810:CDS |
| GCCTTGAAAACCCTTCTTCT+GGG | 0.389251 | 5_1:-35105440 | None:intergenic |
| AGGGTCTTCCAAGAAGTTAC+TGG | 0.392791 | 5_1:+35105590 | Msa0728810:CDS |
| CCTCACAGTTACACATAACT+TGG | 0.396075 | 5_1:+35109444 | Msa0728810:CDS |
| CCTATTCTGCAAGTTATCCT+TGG | 0.401419 | 5_1:-35105329 | None:intergenic |
| GCATCAAATATCAATGTGTT+AGG | 0.413238 | 5_1:+35106406 | Msa0728810:CDS |
| GCCAAATAGTCCGGTAATGA+TGG | 0.414790 | 5_1:-35109497 | None:intergenic |
| CAAGGATAACTTGCAGAATA+GGG | 0.417947 | 5_1:+35105330 | Msa0728810:CDS |
| CAGAGTTTCTGAACTTGTCC+AGG | 0.419261 | 5_1:+35105630 | Msa0728810:CDS |
| TTTATGATTCCCTTGCTCCT+TGG | 0.421622 | 5_1:-35105293 | None:intergenic |
| AATCCACCTGCGACTCGAAC+AGG | 0.422175 | 5_1:-35106259 | None:intergenic |
| AAGGGACGACTTGCACCATT+TGG | 0.424156 | 5_1:-35109790 | None:intergenic |
| GTGTTGGGAGCAGTGCTAAT+TGG | 0.428929 | 5_1:+35109592 | Msa0728810:CDS |
| AAAGGCCAGTGGGTCCAATC+TGG | 0.431232 | 5_1:+35105749 | Msa0728810:CDS |
| CCGCGCTTTGCATTACATCT+TGG | 0.437205 | 5_1:-35109170 | None:intergenic |
| ACTTGCAGAATAGGGAACTT+TGG | 0.442428 | 5_1:+35105338 | Msa0728810:CDS |
| CAGGTTCCTGTTCGAGTCGC+AGG | 0.444572 | 5_1:+35106253 | Msa0728810:intron |
| TGAAGCTAAATAATCTTCAT+TGG | 0.445263 | 5_1:-35105257 | None:intergenic |
| TAAAGAAGTTGCCCAGAAGA+AGG | 0.446211 | 5_1:+35105429 | Msa0728810:CDS |
| AGAAGTTACTGGAAACCAAT+TGG | 0.446900 | 5_1:+35105601 | Msa0728810:CDS |
| CAGGAACTTCTGGCTGGTGG+AGG | 0.446955 | 5_1:+35106548 | Msa0728810:intron |
| AAGCTGTAACATTTAGAGGC+TGG | 0.447502 | 5_1:-35109871 | None:intergenic |
| AGCTGTAACATTTAGAGGCT+GGG | 0.447897 | 5_1:-35109870 | None:intergenic |
| GAAACTCTGGCCCAACCAAT+TGG | 0.448474 | 5_1:-35105616 | None:intergenic |
| TAAGGAGTTGCTTCAGATCC+AGG | 0.448958 | 5_1:-35109538 | None:intergenic |
| AGCTTGTCGTCTTGCACGAT+GGG | 0.449450 | 5_1:+35106613 | Msa0728810:CDS |
| TTGAGTTGATGTTTATGAAC+AGG | 0.450091 | 5_1:+35108062 | Msa0728810:CDS |
| CAGAAACTCACGCGCAAGTA+CGG | 0.450733 | 5_1:+35109719 | Msa0728810:CDS |
| TTACATCTTGGATTGTGAAC+AGG | 0.455195 | 5_1:-35109158 | None:intergenic |
| CTGTGCATAGTGATGCTAGC+TGG | 0.456878 | 5_1:+35105653 | Msa0728810:CDS |
| GTTGATTCATCGACCGGTAA+AGG | 0.460405 | 5_1:-35105517 | None:intergenic |
| CCCACTGGCCTTTCCCAGTA+AGG | 0.462882 | 5_1:-35105739 | None:intergenic |
| AAAACTAGAGCTTCAAGAGT+TGG | 0.468372 | 5_1:+35109675 | Msa0728810:CDS |
| CACATTTATGCCAAATAGTC+CGG | 0.470253 | 5_1:-35109506 | None:intergenic |
| GTCTTGCACGATGGGATGAT+AGG | 0.470550 | 5_1:+35106621 | Msa0728810:CDS |
| CACTGTATTACGAGCATGGC+AGG | 0.470634 | 5_1:+35106342 | Msa0728810:CDS |
| GCAAGCCATGTAGTAACATA+TGG | 0.471150 | 5_1:-35105796 | None:intergenic |
| GAGAAAAGAACAAACGCATA+AGG | 0.475179 | 5_1:-35109556 | None:intergenic |
| TTCAAAGTATGACGAATACT+TGG | 0.478542 | 5_1:-35105143 | None:intergenic |
| TGATGATGAAAGTGATGTTC+CGG | 0.479276 | 5_1:+35105699 | Msa0728810:CDS |
| ATAAATGTGGACGGAATACC+TGG | 0.485416 | 5_1:+35109520 | Msa0728810:CDS |
| TCCAAATGACACCACCAGAT+TGG | 0.485852 | 5_1:-35105763 | None:intergenic |
| ATTGATGCGACAGTCACAAC+TGG | 0.486172 | 5_1:-35105187 | None:intergenic |
| AGGATGTAACCACTGAGAAC+TGG | 0.486622 | 5_1:-35105818 | None:intergenic |
| ATGTTTGTCGTGCAGTTGTA+TGG | 0.487147 | 5_1:+35109841 | Msa0728810:three_prime_UTR |
| TTACCGGTCGATGAATCAAC+TGG | 0.488459 | 5_1:+35105520 | Msa0728810:CDS |
| CTGGACAAGTTCAGAAACTC+TGG | 0.490251 | 5_1:-35105629 | None:intergenic |
| GATTACTGTTTGAACTTCTA+GGG | 0.492096 | 5_1:+35106278 | Msa0728810:CDS |
| ATTGCTGTCTGGAGTAATGA+AGG | 0.495645 | 5_1:+35109092 | Msa0728810:CDS |
| TTGCAGGAACTTCTGGCTGG+TGG | 0.498478 | 5_1:+35106545 | Msa0728810:intron |
| ATTCTGCAAGTTATCCTTGG+TGG | 0.499654 | 5_1:-35105326 | None:intergenic |
| TGCAGGTGATCCATTTATTG+AGG | 0.499728 | 5_1:+35106306 | Msa0728810:CDS |
| GTAACAAGATCATTGCTGTC+TGG | 0.500080 | 5_1:+35109081 | Msa0728810:CDS |
| GTTTATTTACCTCATACAAA+AGG | 0.500666 | 5_1:-35105897 | None:intergenic |
| GAACAAGAAATGAGAACAAA+CGG | 0.500789 | 5_1:-35104347 | None:intergenic |
| TTACTGGAAACCAATTGGTT+GGG | 0.501277 | 5_1:+35105606 | Msa0728810:CDS |
| AGTTGTGACTGTCGCATCAA+TGG | 0.509128 | 5_1:+35105189 | Msa0728810:exon |
| AATAGGGAACTTTGGACTGA+TGG | 0.509753 | 5_1:+35105346 | Msa0728810:CDS |
| CGTGAGTTTCTGCTTCGTGT+TGG | 0.511664 | 5_1:-35109708 | None:intergenic |
| TTGCTTTGCATGATGAAAGC+AGG | 0.513048 | 5_1:+35105851 | Msa0728810:CDS |
| CGATGAATCAACTGGAGGGT+TGG | 0.515156 | 5_1:+35105528 | Msa0728810:CDS |
| GTTACTGGAAACCAATTGGT+TGG | 0.515983 | 5_1:+35105605 | Msa0728810:CDS |
| AGTAGGTTATAAGAGTGAAA+TGG | 0.517488 | 5_1:+35109001 | Msa0728810:intron |
| TGCAAAGCAATGCTAATAGC+AGG | 0.517663 | 5_1:-35105838 | None:intergenic |
| AAAAGAAGTACTAGTAGAAG+TGG | 0.517964 | 5_1:+35105481 | Msa0728810:CDS |
| AAAGAAGTTGCCCAGAAGAA+GGG | 0.520258 | 5_1:+35105430 | Msa0728810:CDS |
| GGCAATGAAGCCAAGGAGCA+AGG | 0.520593 | 5_1:+35105283 | Msa0728810:CDS |
| CTGGAGTAATGAAGGGTACA+AGG | 0.525731 | 5_1:+35109100 | Msa0728810:CDS |
| TAGCTTGTCGTCTTGCACGA+TGG | 0.527982 | 5_1:+35106612 | Msa0728810:CDS |
| ATAGGGAACTTTGGACTGAT+GGG | 0.528622 | 5_1:+35105347 | Msa0728810:CDS |
| GAAGAGCAAGAAGCAGTTCG+AGG | 0.530867 | 5_1:+35109132 | Msa0728810:CDS |
| GGACGACTTGCACCATTTGG+TGG | 0.532888 | 5_1:-35109787 | None:intergenic |
| GAACTTCTAGGGCAGTCTGC+AGG | 0.534225 | 5_1:+35106289 | Msa0728810:CDS |
| TTGAGTTCATCCGCGGGTCA+CGG | 0.536269 | 5_1:+35105383 | Msa0728810:CDS |
| ACATAACTTGGGAGTGTTTG+GGG | 0.537428 | 5_1:+35109456 | Msa0728810:CDS |
| TGTGCATAGTGATGCTAGCT+GGG | 0.537752 | 5_1:+35105654 | Msa0728810:CDS |
| TTCCTCAAGCTGCGTCAGTT+AGG | 0.540579 | 5_1:+35109764 | Msa0728810:CDS |
| CCTCCAGTTGATTCATCGAC+CGG | 0.549360 | 5_1:-35105523 | None:intergenic |
| AGAGAACCGCAACGGAATAA+CGG | 0.552806 | 5_1:-35104285 | None:intergenic |
| TGCAAAGCGCGGTCCGTGCA+TGG | 0.553536 | 5_1:+35109181 | Msa0728810:CDS |
| CTCATCCATATGTTACTACA+TGG | 0.554280 | 5_1:+35105791 | Msa0728810:CDS |
| AACTTCTTTAACTGCTGCTG+AGG | 0.555484 | 5_1:-35105416 | None:intergenic |
| TCACGCGCAAGTACGGAAAA+CGG | 0.556513 | 5_1:+35109726 | Msa0728810:CDS |
| TAGCAACTCCTTACTGGGAA+AGG | 0.557273 | 5_1:+35105731 | Msa0728810:CDS |
| AGTTATCCTTGGTGGAGAAG+TGG | 0.557568 | 5_1:-35105318 | None:intergenic |
| TTCATTTGGCAATGAAGCCA+AGG | 0.557900 | 5_1:+35105276 | Msa0728810:CDS |
| GCTGTAACATTTAGAGGCTG+GGG | 0.559305 | 5_1:-35109869 | None:intergenic |
| ACACAATTTCCTCTCGTGCA+TGG | 0.559641 | 5_1:-35109029 | None:intergenic |
| ACAAAACCTGCAACCATGCA+CGG | 0.559715 | 5_1:-35109194 | None:intergenic |
| CGGACTATTTGGCATAAATG+TGG | 0.561102 | 5_1:+35109507 | Msa0728810:CDS |
| GCGTCAGTTAGGCCACCAAA+TGG | 0.562313 | 5_1:+35109775 | Msa0728810:CDS |
| AGATGTAGCAACTCCTTACT+GGG | 0.565046 | 5_1:+35105726 | Msa0728810:CDS |
| CACCACCAGATTGGACCCAC+TGG | 0.573451 | 5_1:-35105754 | None:intergenic |
| TCCTTACTGGGAAAGGCCAG+TGG | 0.576169 | 5_1:+35105738 | Msa0728810:CDS |
| GAACTTCTTCAACAGTTGAG+AGG | 0.576994 | 5_1:+35109054 | Msa0728810:CDS |
| GTTCCTGTTCGAGTCGCAGG+TGG | 0.577859 | 5_1:+35106256 | Msa0728810:CDS |
| GCAATGAAGCCAAGGAGCAA+GGG | 0.578598 | 5_1:+35105284 | Msa0728810:CDS |
| GGCCTAACTGACGCAGCTTG+AGG | 0.583115 | 5_1:-35109766 | None:intergenic |
| ATAGTCCGGTAATGATGGAA+AGG | 0.583618 | 5_1:-35109492 | None:intergenic |
| TGCCATGCTCGTAATACAGT+GGG | 0.586157 | 5_1:-35106340 | None:intergenic |
| CATAACTTGGGAGTGTTTGG+GGG | 0.589611 | 5_1:+35109457 | Msa0728810:CDS |
| TAGCATCACTATGCACAGCC+TGG | 0.591690 | 5_1:-35105648 | None:intergenic |
| AATGCATAGTTTGAATGATG+AGG | 0.596426 | 5_1:-35104322 | None:intergenic |
| ACTTCTTTAACTGCTGCTGA+GGG | 0.598814 | 5_1:-35105415 | None:intergenic |
| ACTGCACGACAAACATCTAT+CGG | 0.599555 | 5_1:-35109834 | None:intergenic |
| ACAACCTCATGAATACTGCA+TGG | 0.603289 | 5_1:-35106581 | None:intergenic |
| GGCCAGTGGGTCCAATCTGG+TGG | 0.613138 | 5_1:+35105752 | Msa0728810:CDS |
| TTGCTGTCTGGAGTAATGAA+GGG | 0.615714 | 5_1:+35109093 | Msa0728810:CDS |
| CATTCCATGCAGTATTCATG+AGG | 0.617136 | 5_1:+35106577 | Msa0728810:CDS |
| TTCCCACTGTATTACGAGCA+TGG | 0.617335 | 5_1:+35106338 | Msa0728810:CDS |
| TCTTCTTAGGAGGAATCATG+AGG | 0.620718 | 5_1:+35108187 | Msa0728810:intron |
| TGTCGCATCAATGGTAGTCG+AGG | 0.624782 | 5_1:+35105198 | Msa0728810:exon |
| GGAGTTGCTACATCTGCCAC+CGG | 0.626504 | 5_1:-35105718 | None:intergenic |
| CTCACAGTTACACATAACTT+GGG | 0.633387 | 5_1:+35109445 | Msa0728810:CDS |
| CCGGTCGATGAATCAACTGG+AGG | 0.633772 | 5_1:+35105523 | Msa0728810:CDS |
| TCATCATCAGCGAAATCGTG+TGG | 0.634947 | 5_1:-35105685 | None:intergenic |
| GCGGCACCGTTATTCCGTTG+CGG | 0.635767 | 5_1:+35104279 | Msa0728810:five_prime_UTR |
| CTATTTGGCATAAATGTGGA+CGG | 0.636047 | 5_1:+35109511 | Msa0728810:CDS |
| CTGCTTGAGTACGATAGACA+AGG | 0.636140 | 5_1:+35105232 | Msa0728810:CDS |
| CGGTCGATGAATCAACTGGA+GGG | 0.636417 | 5_1:+35105524 | Msa0728810:CDS |
| ATGGTCACTCCATGCACGAG+AGG | 0.639044 | 5_1:+35109020 | Msa0728810:CDS |
| CATGGCTTGCCAGTTCTCAG+TGG | 0.646014 | 5_1:+35105809 | Msa0728810:CDS |
| AATAAGAAGATTATCAACCC+AGG | 0.646315 | 5_1:+35108244 | Msa0728810:CDS |
| CCTTACTGGGAAAGGCCAGT+GGG | 0.650574 | 5_1:+35105739 | Msa0728810:CDS |
| GCTCACTATAATATTGAACC+AGG | 0.652827 | 5_1:+35108220 | Msa0728810:CDS |
| GCTTGAGGAACATCTTTGTG+AGG | 0.654137 | 5_1:-35109751 | None:intergenic |
| GATGAGTCTTCCGTGACCCG+CGG | 0.656408 | 5_1:-35105393 | None:intergenic |
| CTGCCATGCTCGTAATACAG+TGG | 0.658408 | 5_1:-35106341 | None:intergenic |
| GTTTCGTAAACACATCTTTG+GGG | 0.659032 | 5_1:+35108027 | Msa0728810:CDS |
| TGTCTATCGTACTCAAGCAG+AGG | 0.669077 | 5_1:-35105229 | None:intergenic |
| TAGATTTGATTTAGAGTGCG+CGG | 0.671010 | 5_1:+35104260 | None:intergenic |
| AAAGACGAAGAGAACCGCAA+CGG | 0.672746 | 5_1:-35104293 | None:intergenic |
| CCAAGATGTAATGCAAAGCG+CGG | 0.676963 | 5_1:+35109170 | Msa0728810:CDS |
| CCAAGTTATGTGTAACTGTG+AGG | 0.685024 | 5_1:-35109444 | None:intergenic |
| ATCGTGCAAGACGACAAGCT+AGG | 0.693468 | 5_1:-35106610 | None:intergenic |
| TAAAGTCCACTTCTCCACCA+AGG | 0.702534 | 5_1:+35105312 | Msa0728810:CDS |
| TGATGAAAGTGATGTTCCGG+TGG | 0.725046 | 5_1:+35105702 | Msa0728810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAAATAAAAAATGATTTT+TGG | - | chr5_1:35105016-35105035 | None:intergenic | 10.0% |
| !!! | AAAATAAAAAATAATGCTTT+TGG | - | chr5_1:35106487-35106506 | None:intergenic | 10.0% |
| !! | GAAATAAAAATAATTAACAA+TGG | - | chr5_1:35107436-35107455 | None:intergenic | 10.0% |
| !!! | GGTAAAATATTTTATAAATA+TGG | - | chr5_1:35107795-35107814 | None:intergenic | 10.0% |
| !! | AAATAAAATCAAAACATAAT+TGG | + | chr5_1:35108615-35108634 | Msa0728810:intron | 10.0% |
| !!! | TTTAATCATGTATAATTTTG+GGG | - | chr5_1:35104699-35104718 | None:intergenic | 15.0% |
| !!! | GTTTAATCATGTATAATTTT+GGG | - | chr5_1:35104700-35104719 | None:intergenic | 15.0% |
| !!! | TGTTTAATCATGTATAATTT+TGG | - | chr5_1:35104701-35104720 | None:intergenic | 15.0% |
| !! | GTTAAAACAATTAAAATATG+TGG | - | chr5_1:35104953-35104972 | None:intergenic | 15.0% |
| !!! | AAGATAAATATAGTCTTAAA+TGG | + | chr5_1:35106793-35106812 | Msa0728810:intron | 15.0% |
| !! | TTATAAATATGGAGAAAAAA+AGG | - | chr5_1:35107784-35107803 | None:intergenic | 15.0% |
| !! | ATTAATAACAAATAGAAAGA+TGG | - | chr5_1:35107988-35108007 | None:intergenic | 15.0% |
| !! | AAAACTAAATTAGAAGTTTA+TGG | - | chr5_1:35108319-35108338 | None:intergenic | 15.0% |
| !!! | TTTAGTTTTACAAATTGTAT+TGG | + | chr5_1:35108330-35108349 | Msa0728810:intron | 15.0% |
| !! | AAAATTATGAAAGAAAAGAA+AGG | + | chr5_1:35108569-35108588 | Msa0728810:intron | 15.0% |
| !! | AAATTATGAAAGAAAAGAAA+GGG | + | chr5_1:35108570-35108589 | Msa0728810:intron | 15.0% |
| !! | ATTTAACAAGATACTTATTA+TGG | - | chr5_1:35108749-35108768 | None:intergenic | 15.0% |
| !!! | AACAATTTTGAAAACATAAA+GGG | - | chr5_1:35109811-35109830 | None:intergenic | 15.0% |
| !!! | CATGATTAAACATAATTTTC+AGG | + | chr5_1:35104709-35104728 | Msa0728810:intron | 20.0% |
| !!! | TTTTAAACACCTTAAAATTG+TGG | + | chr5_1:35104836-35104855 | Msa0728810:intron | 20.0% |
| !!! | TTTTTGTTTCAGTGATTTTA+TGG | + | chr5_1:35105103-35105122 | Msa0728810:intron | 20.0% |
| !!! | AATTTAGCTTCATAATATCA+CGG | - | chr5_1:35106055-35106074 | None:intergenic | 20.0% |
| !!! | GATATTATGAAGCTAAATTT+TGG | + | chr5_1:35106056-35106075 | Msa0728810:intron | 20.0% |
| !!! | AAAATAAGTTTTTGATTGAC+AGG | + | chr5_1:35106234-35106253 | Msa0728810:intron | 20.0% |
| !!! | TTTGACAAGACATTTTATTA+AGG | + | chr5_1:35106861-35106880 | Msa0728810:intron | 20.0% |
| !!! | TATGCAGATATACTATTTTT+AGG | + | chr5_1:35106918-35106937 | Msa0728810:intron | 20.0% |
| !!! | ATGCAGATATACTATTTTTA+GGG | + | chr5_1:35106919-35106938 | Msa0728810:intron | 20.0% |
| !! | GTCAAATTTGAAAGAATATA+TGG | + | chr5_1:35107041-35107060 | Msa0728810:intron | 20.0% |
| !!! | TTTTGATGCTGATATTTAAT+TGG | + | chr5_1:35107843-35107862 | Msa0728810:intron | 20.0% |
| !! | TTCTTAAATCATACTTAGTT+TGG | + | chr5_1:35107941-35107960 | Msa0728810:intron | 20.0% |
| !!! | TGTTTCTTTGTTTTTTGTTT+TGG | + | chr5_1:35108396-35108415 | Msa0728810:intron | 20.0% |
| !! | TAATACAACAATATGAACTA+AGG | - | chr5_1:35108442-35108461 | None:intergenic | 20.0% |
| !! | CACAATTAACATAATTACTA+TGG | - | chr5_1:35108890-35108909 | None:intergenic | 20.0% |
| !! | ATTATGTTAATTGTGTACAT+TGG | + | chr5_1:35108895-35108914 | Msa0728810:intron | 20.0% |
| !!! | GAACAATTTTGAAAACATAA+AGG | - | chr5_1:35109812-35109831 | None:intergenic | 20.0% |
| !!! | TTGTATGTTTTCAAAAATGT+CGG | + | chr5_1:35109969-35109988 | Msa0728810:three_prime_UTR | 20.0% |
| ! | TTTGAATTTGGATTCGAAAA+TGG | - | chr5_1:35104382-35104401 | None:intergenic | 25.0% |
| !! | ATTTTCGAATCCAAATTCAA+AGG | + | chr5_1:35104381-35104400 | Msa0728810:five_prime_UTR | 25.0% |
| ! | ACAATAAGTCATAAGATTGA+AGG | - | chr5_1:35104411-35104430 | None:intergenic | 25.0% |
| ! | AGATTAGAAAATACAAGACA+TGG | - | chr5_1:35104570-35104589 | None:intergenic | 25.0% |
| ! | TAATTACTATCAGATATACC+AGG | + | chr5_1:35104653-35104672 | Msa0728810:intron | 25.0% |
| !! | AACTTTGGTAATCATGAATT+TGG | + | chr5_1:35104771-35104790 | Msa0728810:intron | 25.0% |
| ! | ATATGTGGCTAATTATATTG+AGG | - | chr5_1:35104938-35104957 | None:intergenic | 25.0% |
| !!! | TTTTATTTTTCATCTTGACC+AGG | + | chr5_1:35105025-35105044 | Msa0728810:intron | 25.0% |
| ! | TGAAGCTAAATAATCTTCAT+TGG | - | chr5_1:35105260-35105279 | None:intergenic | 25.0% |
| !! | GAAGATTATTTAGCTTCATT+TGG | + | chr5_1:35105262-35105281 | Msa0728810:CDS | 25.0% |
| !! | TTCGATAACAATAACTGTTT+TGG | + | chr5_1:35105562-35105581 | Msa0728810:CDS | 25.0% |
| ! | GTTTATTTACCTCATACAAA+AGG | - | chr5_1:35105900-35105919 | None:intergenic | 25.0% |
| ! | GTAAAATGGTAATAGCAAAT+TGG | - | chr5_1:35105978-35105997 | None:intergenic | 25.0% |
| !! | ATTACCATTTTACATTCGTT+TGG | + | chr5_1:35105985-35106004 | Msa0728810:intron | 25.0% |
| ! | AGGTTAATATTCTTTACATC+TGG | + | chr5_1:35106641-35106660 | Msa0728810:intron | 25.0% |
| !! | CAGAAAAAGATTTTCTAAGT+TGG | - | chr5_1:35106670-35106689 | None:intergenic | 25.0% |
| !! | CAACTTAGAAAATCTTTTTC+TGG | + | chr5_1:35106668-35106687 | Msa0728810:intron | 25.0% |
| ! | ATGTAAAATACCAGTAGAAA+AGG | - | chr5_1:35106754-35106773 | None:intergenic | 25.0% |
| !! | TTTCTACTGGTATTTTACAT+TGG | + | chr5_1:35106754-35106773 | Msa0728810:intron | 25.0% |
| !! | AAGACATTTTATTAAGGTGA+AGG | + | chr5_1:35106867-35106886 | Msa0728810:intron | 25.0% |
| !! | AGACATTTTATTAAGGTGAA+GGG | + | chr5_1:35106868-35106887 | Msa0728810:intron | 25.0% |
| !!! | ATACTATTTTTAGGGTCAAT+TGG | + | chr5_1:35106927-35106946 | Msa0728810:intron | 25.0% |
| ! | TTATAGTATACACAGAATGA+AGG | + | chr5_1:35106971-35106990 | Msa0728810:intron | 25.0% |
| ! | TTTAAGTGATTTATGCTACA+TGG | - | chr5_1:35107305-35107324 | None:intergenic | 25.0% |
| ! | TGAGGAAAATTCTAACTTTA+TGG | - | chr5_1:35107637-35107656 | None:intergenic | 25.0% |
| ! | AAAAAAAGGAAAAGCTAGAA+TGG | - | chr5_1:35107770-35107789 | None:intergenic | 25.0% |
| ! | GAATAAGAAATCAATAAGTC+CGG | - | chr5_1:35107816-35107835 | None:intergenic | 25.0% |
| ! | ATTAATGCATATGATATCAC+AGG | + | chr5_1:35108002-35108021 | Msa0728810:intron | 25.0% |
| ! | ACAGAAGTTCTTATGTTTAA+TGG | - | chr5_1:35108107-35108126 | None:intergenic | 25.0% |
| !! | TTGATAATCTTCTTATTTCC+TGG | - | chr5_1:35108241-35108260 | None:intergenic | 25.0% |
| !! | CTTCTTTCTTTTCATTTAGT+TGG | + | chr5_1:35108705-35108724 | Msa0728810:intron | 25.0% |
| !! | TTTCTTTTCATTTAGTTGGT+TGG | + | chr5_1:35108709-35108728 | Msa0728810:intron | 25.0% |
| !! | TCTGAATTTTCGATTATCTT+TGG | + | chr5_1:35108863-35108882 | Msa0728810:intron | 25.0% |
| ! | TTGAAGAGATTAAATTTCAG+TGG | - | chr5_1:35109232-35109251 | None:intergenic | 25.0% |
| !!! | TATTAGCTGCTTCTTATTTT+AGG | + | chr5_1:35109414-35109433 | Msa0728810:intron | 25.0% |
| ! | AGCTTATACATAATGATGTT+TGG | + | chr5_1:35109889-35109908 | Msa0728810:three_prime_UTR | 25.0% |
| AATGCATAGTTTGAATGATG+AGG | - | chr5_1:35104325-35104344 | None:intergenic | 30.0% | |
| GAACAAGAAATGAGAACAAA+CGG | - | chr5_1:35104350-35104369 | None:intergenic | 30.0% | |
| TGAAGGTTTACCTTTGAATT+TGG | - | chr5_1:35104394-35104413 | None:intergenic | 30.0% | |
| !!! | AGTTAATGAGTTTTAAGACC+TGG | - | chr5_1:35104674-35104693 | None:intergenic | 30.0% |
| TACGATCAATTACAATCATC+AGG | + | chr5_1:35104742-35104761 | Msa0728810:intron | 30.0% | |
| ! | CATGATTAACCATGATTTTC+AGG | + | chr5_1:35104795-35104814 | Msa0728810:intron | 30.0% |
| ! | CGTGATTAACCACAATTTTA+AGG | - | chr5_1:35104848-35104867 | None:intergenic | 30.0% |
| CAATGTAACTTCATTAACCA+TGG | - | chr5_1:35104878-35104897 | None:intergenic | 30.0% | |
| GGTTAATGAAGTTACATTGA+TGG | + | chr5_1:35104879-35104898 | Msa0728810:intron | 30.0% | |
| TTGAGGTTAATTGATATGCT+AGG | - | chr5_1:35104921-35104940 | None:intergenic | 30.0% | |
| TACACATAAAAGAACAAACC+TGG | - | chr5_1:35105046-35105065 | None:intergenic | 30.0% | |
| TTCAAAGTATGACGAATACT+TGG | - | chr5_1:35105146-35105165 | None:intergenic | 30.0% | |
| ! | CTACTAGTACTTCTTTTCAA+TGG | - | chr5_1:35105478-35105497 | None:intergenic | 30.0% |
| !! | AAAAGAAGTACTAGTAGAAG+TGG | + | chr5_1:35105481-35105500 | Msa0728810:CDS | 30.0% |
| CTTTCATGAATTACCTTTAC+CGG | + | chr5_1:35105504-35105523 | Msa0728810:CDS | 30.0% | |
| !!! | AATAACTGTTTTGGCAAAGA+GGG | + | chr5_1:35105571-35105590 | Msa0728810:CDS | 30.0% |
| ! | AATGAAACACCTTTTGTATG+AGG | + | chr5_1:35105888-35105907 | Msa0728810:CDS | 30.0% |
| GATTACTGTTTGAACTTCTA+GGG | + | chr5_1:35106278-35106297 | Msa0728810:CDS | 30.0% | |
| ATGTCATCTTCCTCAATAAA+TGG | - | chr5_1:35106319-35106338 | None:intergenic | 30.0% | |
| GCATCAAATATCAATGTGTT+AGG | + | chr5_1:35106406-35106425 | Msa0728810:CDS | 30.0% | |
| AAATTATTGTCCGAGTAACT+TGG | - | chr5_1:35106462-35106481 | None:intergenic | 30.0% | |
| ! | ATTACCTTTACCTTTTCTAC+TGG | + | chr5_1:35106741-35106760 | Msa0728810:intron | 30.0% |
| AATACCAGTAGAAAAGGTAA+AGG | - | chr5_1:35106748-35106767 | None:intergenic | 30.0% | |
| ACACTCTTATAATGTAGTTG+AGG | - | chr5_1:35106835-35106854 | None:intergenic | 30.0% | |
| TTGTTTAAGGAAGAGGTTAT+AGG | + | chr5_1:35107089-35107108 | Msa0728810:intron | 30.0% | |
| !!! | GAACGACAAGATTATTTTTG+AGG | - | chr5_1:35107411-35107430 | None:intergenic | 30.0% |
| TGTGAAGGAAGAATAAAAGA+GGG | - | chr5_1:35107585-35107604 | None:intergenic | 30.0% | |
| TTGTGAAGGAAGAATAAAAG+AGG | - | chr5_1:35107586-35107605 | None:intergenic | 30.0% | |
| ! | TCTTTTATTCTTCCTTCACA+AGG | + | chr5_1:35107585-35107604 | Msa0728810:intron | 30.0% |
| CTCATTAATGCTGTGTATTT+GGG | + | chr5_1:35107653-35107672 | Msa0728810:intron | 30.0% | |
| TTGTTTCGTAAACACATCTT+TGG | + | chr5_1:35108025-35108044 | Msa0728810:CDS | 30.0% | |
| TGTTTCGTAAACACATCTTT+GGG | + | chr5_1:35108026-35108045 | Msa0728810:CDS | 30.0% | |
| !! | TTGAGTTGATGTTTATGAAC+AGG | + | chr5_1:35108062-35108081 | Msa0728810:CDS | 30.0% |
| ! | ATGTTCTTTTCCTTCTTCTT+AGG | + | chr5_1:35108174-35108193 | Msa0728810:intron | 30.0% |
| AATAAGAAGATTATCAACCC+AGG | + | chr5_1:35108244-35108263 | Msa0728810:CDS | 30.0% | |
| !! | TGTATTGGTGTTAATAATGC+TGG | + | chr5_1:35108345-35108364 | Msa0728810:intron | 30.0% |
| TGCTGGACAAAAAGTTTATT+TGG | + | chr5_1:35108362-35108381 | Msa0728810:intron | 30.0% | |
| AAAACATAATTGGAAGCCAA+GGG | + | chr5_1:35108625-35108644 | Msa0728810:intron | 30.0% | |
| !! | TTTCTCAGCTATTTTGAATG+TGG | + | chr5_1:35108661-35108680 | Msa0728810:intron | 30.0% |
| TTTCACTCTTATAACCTACT+AGG | - | chr5_1:35109001-35109020 | None:intergenic | 30.0% | |
| AGTAGGTTATAAGAGTGAAA+TGG | + | chr5_1:35109001-35109020 | Msa0728810:intron | 30.0% | |
| AGAGATTAAATTTCAGTGGT+TGG | - | chr5_1:35109228-35109247 | None:intergenic | 30.0% | |
| ! | TAAATCTTTTGCACTTATGC+TGG | - | chr5_1:35109321-35109340 | None:intergenic | 30.0% |
| ! | AAGCAGCTAATAGTCAATTT+TGG | - | chr5_1:35109406-35109425 | None:intergenic | 30.0% |
| TCTGTTATCTTAGTTGTGTT+GGG | + | chr5_1:35109577-35109596 | Msa0728810:CDS | 30.0% | |
| GAATTGGATTGCTTTATCTT+GGG | + | chr5_1:35109614-35109633 | Msa0728810:CDS | 30.0% | |
| ACAACACTTTCTTCAATGAT+TGG | - | chr5_1:35109649-35109668 | None:intergenic | 30.0% | |
| GTATAAGCTGTAACATTTAG+AGG | - | chr5_1:35109878-35109897 | None:intergenic | 30.0% | |
| GCTAAAATTTCACACTTTCG+CGG | + | chr5_1:35104610-35104629 | Msa0728810:intron | 35.0% | |
| CAATTACAATCATCAGGTGT+TGG | + | chr5_1:35104748-35104767 | Msa0728810:intron | 35.0% | |
| GTTAATCACGTTCAAATCCA+TGG | + | chr5_1:35104858-35104877 | Msa0728810:intron | 35.0% | |
| ! | CTTTCGCAACAACTTTTAAG+TGG | - | chr5_1:35104975-35104994 | None:intergenic | 35.0% |
| ! | CAAGGATAACTTGCAGAATA+GGG | + | chr5_1:35105330-35105349 | Msa0728810:CDS | 35.0% |
| !!! | CAATAACTGTTTTGGCAAAG+AGG | + | chr5_1:35105570-35105589 | Msa0728810:CDS | 35.0% |
| ! | ATTGGTTTCCAGTAACTTCT+TGG | - | chr5_1:35105601-35105620 | None:intergenic | 35.0% |
| AGAAGTTACTGGAAACCAAT+TGG | + | chr5_1:35105601-35105620 | Msa0728810:CDS | 35.0% | |
| TTACTGGAAACCAATTGGTT+GGG | + | chr5_1:35105606-35105625 | Msa0728810:CDS | 35.0% | |
| ! | TGATGATGAAAGTGATGTTC+CGG | + | chr5_1:35105699-35105718 | Msa0728810:CDS | 35.0% |
| CTCATCCATATGTTACTACA+TGG | + | chr5_1:35105791-35105810 | Msa0728810:CDS | 35.0% | |
| GGAACCAAACGAATGTAAAA+TGG | - | chr5_1:35105992-35106011 | None:intergenic | 35.0% | |
| CGAGAATAATAGAATTGACG+CGG | - | chr5_1:35106013-35106032 | None:intergenic | 35.0% | |
| !!! | TAAATTTTGGAGCTTCACTC+TGG | + | chr5_1:35106069-35106088 | Msa0728810:intron | 35.0% |
| GGATTACTGTTTGAACTTCT+AGG | + | chr5_1:35106277-35106296 | Msa0728810:CDS | 35.0% | |
| ! | GTGACAGTTTTGCATGTTAA+GGG | + | chr5_1:35106379-35106398 | Msa0728810:CDS | 35.0% |
| !! | GTTAGGCATTTTAGAAGTTC+AGG | + | chr5_1:35106423-35106442 | Msa0728810:CDS | 35.0% |
| AACACAGTTGAAGGTAACTA+AGG | - | chr5_1:35106525-35106544 | None:intergenic | 35.0% | |
| TATGGAATTGCAGTATCTAC+CGG | + | chr5_1:35107059-35107078 | Msa0728810:intron | 35.0% | |
| ! | CAGAATATGCTTTAGCCTTT+AGG | + | chr5_1:35107159-35107178 | Msa0728810:intron | 35.0% |
| AAGTGATTTATGCTACATGG+TGG | - | chr5_1:35107302-35107321 | None:intergenic | 35.0% | |
| AGTCTTCGTAGTCTATGTTT+GGG | - | chr5_1:35107380-35107399 | None:intergenic | 35.0% | |
| ! | TGTTTATAACTGACTTCACC+TGG | - | chr5_1:35107489-35107508 | None:intergenic | 35.0% |
| TTCACAGATCAACATGTCAT+GGG | - | chr5_1:35107527-35107546 | None:intergenic | 35.0% | |
| TTTCACAGATCAACATGTCA+TGG | - | chr5_1:35107528-35107547 | None:intergenic | 35.0% | |
| ACATGTTGATCTGTGAAAGA+AGG | + | chr5_1:35107530-35107549 | Msa0728810:intron | 35.0% | |
| GTGAAGGAAGAATAAAAGAG+GGG | - | chr5_1:35107584-35107603 | None:intergenic | 35.0% | |
| ! | ACTAAAATACAGCCTTGTGA+AGG | - | chr5_1:35107600-35107619 | None:intergenic | 35.0% |
| !!! | CAAGGCTGTATTTTAGTTCT+TGG | + | chr5_1:35107603-35107622 | Msa0728810:intron | 35.0% |
| CCAAATACACAGCATTAATG+AGG | - | chr5_1:35107655-35107674 | None:intergenic | 35.0% | |
| CCTCATTAATGCTGTGTATT+TGG | + | chr5_1:35107652-35107671 | Msa0728810:intron | 35.0% | |
| GTTTCGTAAACACATCTTTG+GGG | + | chr5_1:35108027-35108046 | Msa0728810:CDS | 35.0% | |
| TAAGAACTTCTGTGTAGCAT+AGG | + | chr5_1:35108114-35108133 | Msa0728810:intron | 35.0% | |
| ! | TTCTTTTCCTTCTTCTTAGG+AGG | + | chr5_1:35108177-35108196 | Msa0728810:intron | 35.0% |
| GCTCACTATAATATTGAACC+AGG | + | chr5_1:35108220-35108239 | Msa0728810:CDS | 35.0% | |
| GTACAGTATTAGTCATTCTG+TGG | - | chr5_1:35108282-35108301 | None:intergenic | 35.0% | |
| CAGAATGACTAATACTGTAC+TGG | + | chr5_1:35108282-35108301 | Msa0728810:intron | 35.0% | |
| CAAAACATAATTGGAAGCCA+AGG | + | chr5_1:35108624-35108643 | Msa0728810:intron | 35.0% | |
| AAACATAATTGGAAGCCAAG+GGG | + | chr5_1:35108626-35108645 | Msa0728810:intron | 35.0% | |
| AAAATCATGATATAGCCCCT+TGG | - | chr5_1:35108644-35108663 | None:intergenic | 35.0% | |
| !! | TCAGCTATTTTGAATGTGGT+TGG | + | chr5_1:35108665-35108684 | Msa0728810:intron | 35.0% |
| ACAATTAACACGAGAGAGAA+AGG | - | chr5_1:35108936-35108955 | None:intergenic | 35.0% | |
| CTCGTGTTAATTGTGTACAT+TGG | + | chr5_1:35108942-35108961 | Msa0728810:intron | 35.0% | |
| TTACATCTTGGATTGTGAAC+AGG | - | chr5_1:35109161-35109180 | None:intergenic | 35.0% | |
| ATTTATTTCGCAGTCACACT+CGG | + | chr5_1:35109336-35109355 | Msa0728810:intron | 35.0% | |
| CTCACAGTTACACATAACTT+GGG | + | chr5_1:35109445-35109464 | Msa0728810:CDS | 35.0% | |
| CACATTTATGCCAAATAGTC+CGG | - | chr5_1:35109509-35109528 | None:intergenic | 35.0% | |
| CTATTTGGCATAAATGTGGA+CGG | + | chr5_1:35109511-35109530 | Msa0728810:CDS | 35.0% | |
| GAGAAAAGAACAAACGCATA+AGG | - | chr5_1:35109559-35109578 | None:intergenic | 35.0% | |
| CTCTGTTATCTTAGTTGTGT+TGG | + | chr5_1:35109576-35109595 | Msa0728810:CDS | 35.0% | |
| GGAATTGGATTGCTTTATCT+TGG | + | chr5_1:35109613-35109632 | Msa0728810:CDS | 35.0% | |
| AAAACTAGAGCTTCAAGAGT+TGG | + | chr5_1:35109675-35109694 | Msa0728810:CDS | 35.0% | |
| !! | ATCATCAGGTGTTGGAACTT+TGG | + | chr5_1:35104756-35104775 | Msa0728810:intron | 40.0% |
| TTCATTTGGCAATGAAGCCA+AGG | + | chr5_1:35105276-35105295 | Msa0728810:CDS | 40.0% | |
| TTTATGATTCCCTTGCTCCT+TGG | - | chr5_1:35105296-35105315 | None:intergenic | 40.0% | |
| ATTCTGCAAGTTATCCTTGG+TGG | - | chr5_1:35105329-35105348 | None:intergenic | 40.0% | |
| CCTATTCTGCAAGTTATCCT+TGG | - | chr5_1:35105332-35105351 | None:intergenic | 40.0% | |
| ! | CCAAGGATAACTTGCAGAAT+AGG | + | chr5_1:35105329-35105348 | Msa0728810:CDS | 40.0% |
| ACTTGCAGAATAGGGAACTT+TGG | + | chr5_1:35105338-35105357 | Msa0728810:CDS | 40.0% | |
| AATAGGGAACTTTGGACTGA+TGG | + | chr5_1:35105346-35105365 | Msa0728810:CDS | 40.0% | |
| ATAGGGAACTTTGGACTGAT+GGG | + | chr5_1:35105347-35105366 | Msa0728810:CDS | 40.0% | |
| ACTTCTTTAACTGCTGCTGA+GGG | - | chr5_1:35105418-35105437 | None:intergenic | 40.0% | |
| AACTTCTTTAACTGCTGCTG+AGG | - | chr5_1:35105419-35105438 | None:intergenic | 40.0% | |
| TAAAGAAGTTGCCCAGAAGA+AGG | + | chr5_1:35105429-35105448 | Msa0728810:CDS | 40.0% | |
| AAAGAAGTTGCCCAGAAGAA+GGG | + | chr5_1:35105430-35105449 | Msa0728810:CDS | 40.0% | |
| GTTACTGGAAACCAATTGGT+TGG | + | chr5_1:35105605-35105624 | Msa0728810:CDS | 40.0% | |
| AGATGTAGCAACTCCTTACT+GGG | + | chr5_1:35105726-35105745 | Msa0728810:CDS | 40.0% | |
| GCAAGCCATGTAGTAACATA+TGG | - | chr5_1:35105799-35105818 | None:intergenic | 40.0% | |
| TGCAAAGCAATGCTAATAGC+AGG | - | chr5_1:35105841-35105860 | None:intergenic | 40.0% | |
| TTGCTTTGCATGATGAAAGC+AGG | + | chr5_1:35105851-35105870 | Msa0728810:CDS | 40.0% | |
| AGATACATCTCGTGGTTTCT+TGG | + | chr5_1:35106148-35106167 | Msa0728810:intron | 40.0% | |
| ATTCAGTGTACAGTTGCGAT+AGG | + | chr5_1:35106200-35106219 | Msa0728810:intron | 40.0% | |
| TGCAGGTGATCCATTTATTG+AGG | + | chr5_1:35106306-35106325 | Msa0728810:CDS | 40.0% | |
| ! | GGTGACAGTTTTGCATGTTA+AGG | + | chr5_1:35106378-35106397 | Msa0728810:CDS | 40.0% |
| GTCAGCTTAACCAAGTTACT+CGG | + | chr5_1:35106449-35106468 | Msa0728810:intron | 40.0% | |
| ! | TACCTTCAACTGTGTTTTGC+AGG | + | chr5_1:35106529-35106548 | Msa0728810:intron | 40.0% |
| TTCCTGCAAAACACAGTTGA+AGG | - | chr5_1:35106534-35106553 | None:intergenic | 40.0% | |
| CATTCCATGCAGTATTCATG+AGG | + | chr5_1:35106577-35106596 | Msa0728810:CDS | 40.0% | |
| ACAACCTCATGAATACTGCA+TGG | - | chr5_1:35106584-35106603 | None:intergenic | 40.0% | |
| !!! | TTTTAGGGTCAATTGGTAGC+TGG | + | chr5_1:35106934-35106953 | Msa0728810:intron | 40.0% |
| TTCCTTAAACAACGCTGAAC+CGG | - | chr5_1:35107081-35107100 | None:intergenic | 40.0% | |
| TTCAGCGTTGTTTAAGGAAG+AGG | + | chr5_1:35107082-35107101 | Msa0728810:intron | 40.0% | |
| AGGAAGAGGTTATAGGAATC+TGG | + | chr5_1:35107096-35107115 | Msa0728810:intron | 40.0% | |
| GAGGTTATAGGAATCTGGTT+TGG | + | chr5_1:35107101-35107120 | Msa0728810:intron | 40.0% | |
| !! | GTTATAGGAATCTGGTTTGG+TGG | + | chr5_1:35107104-35107123 | Msa0728810:intron | 40.0% |
| CAGAATCAAAGTCGACCTAA+AGG | - | chr5_1:35107177-35107196 | None:intergenic | 40.0% | |
| AATAGTCAACTGCAAACCTC+AGG | - | chr5_1:35107212-35107231 | None:intergenic | 40.0% | |
| CTACACTGAACTGTCAACTA+GGG | - | chr5_1:35107240-35107259 | None:intergenic | 40.0% | |
| TCTACACTGAACTGTCAACT+AGG | - | chr5_1:35107241-35107260 | None:intergenic | 40.0% | |
| CAGTCTTCGTAGTCTATGTT+TGG | - | chr5_1:35107381-35107400 | None:intergenic | 40.0% | |
| ! | AACACAAGTCTTTTACCACC+AGG | + | chr5_1:35107468-35107487 | Msa0728810:intron | 40.0% |
| ! | TTATAACTGACTTCACCTGG+TGG | - | chr5_1:35107486-35107505 | None:intergenic | 40.0% |
| TCACAGATCAACATGTCATG+GGG | - | chr5_1:35107526-35107545 | None:intergenic | 40.0% | |
| AGGAAGAATAAAAGAGGGGA+GGG | - | chr5_1:35107580-35107599 | None:intergenic | 40.0% | |
| AAGGAAGAATAAAAGAGGGG+AGG | - | chr5_1:35107581-35107600 | None:intergenic | 40.0% | |
| TGTGTATTTGGGTATCAGAC+TGG | + | chr5_1:35107664-35107683 | Msa0728810:intron | 40.0% | |
| GTGTATTTGGGTATCAGACT+GGG | + | chr5_1:35107665-35107684 | Msa0728810:intron | 40.0% | |
| TTAGCTCCAGTAGTAGTTTG+TGG | + | chr5_1:35107705-35107724 | Msa0728810:intron | 40.0% | |
| ACAAGTCCACAAACTACTAC+TGG | - | chr5_1:35107714-35107733 | None:intergenic | 40.0% | |
| CATGATTCCTCCTAAGAAGA+AGG | - | chr5_1:35108187-35108206 | None:intergenic | 40.0% | |
| TCTTCTTAGGAGGAATCATG+AGG | + | chr5_1:35108187-35108206 | Msa0728810:intron | 40.0% | |
| GTATTAGTCATTCTGTGGTC+TGG | - | chr5_1:35108277-35108296 | None:intergenic | 40.0% | |
| GAACTTCTTCAACAGTTGAG+AGG | + | chr5_1:35109054-35109073 | Msa0728810:CDS | 40.0% | |
| GTAACAAGATCATTGCTGTC+TGG | + | chr5_1:35109081-35109100 | Msa0728810:CDS | 40.0% | |
| ! | ATTGCTGTCTGGAGTAATGA+AGG | + | chr5_1:35109092-35109111 | Msa0728810:CDS | 40.0% |
| ! | TTGCTGTCTGGAGTAATGAA+GGG | + | chr5_1:35109093-35109112 | Msa0728810:CDS | 40.0% |
| TTTATTTCGCAGTCACACTC+GGG | + | chr5_1:35109337-35109356 | Msa0728810:intron | 40.0% | |
| CGAAGCTAAAAAGCAGATAC+CGG | - | chr5_1:35109363-35109382 | None:intergenic | 40.0% | |
| !!! | CTGCTTTTTAGCTTCGAACT+AGG | + | chr5_1:35109367-35109386 | Msa0728810:intron | 40.0% |
| CCAAGTTATGTGTAACTGTG+AGG | - | chr5_1:35109447-35109466 | None:intergenic | 40.0% | |
| CCTCACAGTTACACATAACT+TGG | + | chr5_1:35109444-35109463 | Msa0728810:CDS | 40.0% | |
| !! | ACACATAACTTGGGAGTGTT+TGG | + | chr5_1:35109454-35109473 | Msa0728810:CDS | 40.0% |
| !! | CACATAACTTGGGAGTGTTT+GGG | + | chr5_1:35109455-35109474 | Msa0728810:CDS | 40.0% |
| !! | ACATAACTTGGGAGTGTTTG+GGG | + | chr5_1:35109456-35109475 | Msa0728810:CDS | 40.0% |
| CTTGTCCTTTCCATCATTAC+CGG | + | chr5_1:35109487-35109506 | Msa0728810:CDS | 40.0% | |
| ! | ATAGTCCGGTAATGATGGAA+AGG | - | chr5_1:35109495-35109514 | None:intergenic | 40.0% |
| TCCATCATTACCGGACTATT+TGG | + | chr5_1:35109496-35109515 | Msa0728810:CDS | 40.0% | |
| CGGACTATTTGGCATAAATG+TGG | + | chr5_1:35109507-35109526 | Msa0728810:CDS | 40.0% | |
| ATAAATGTGGACGGAATACC+TGG | + | chr5_1:35109520-35109539 | Msa0728810:CDS | 40.0% | |
| ACTGCACGACAAACATCTAT+CGG | - | chr5_1:35109837-35109856 | None:intergenic | 40.0% | |
| ATGTTTGTCGTGCAGTTGTA+TGG | + | chr5_1:35109841-35109860 | Msa0728810:three_prime_UTR | 40.0% | |
| AGCTGTAACATTTAGAGGCT+GGG | - | chr5_1:35109873-35109892 | None:intergenic | 40.0% | |
| AAGCTGTAACATTTAGAGGC+TGG | - | chr5_1:35109874-35109893 | None:intergenic | 40.0% | |
| AGAGAACCGCAACGGAATAA+CGG | - | chr5_1:35104288-35104307 | None:intergenic | 45.0% | |
| AAAGACGAAGAGAACCGCAA+CGG | - | chr5_1:35104296-35104315 | None:intergenic | 45.0% | |
| AGCTGAACGCCTGAAAATCA+TGG | - | chr5_1:35104807-35104826 | None:intergenic | 45.0% | |
| ATTGATGCGACAGTCACAAC+TGG | - | chr5_1:35105190-35105209 | None:intergenic | 45.0% | |
| AGTTGTGACTGTCGCATCAA+TGG | + | chr5_1:35105189-35105208 | Msa0728810:exon | 45.0% | |
| TGTCTATCGTACTCAAGCAG+AGG | - | chr5_1:35105232-35105251 | None:intergenic | 45.0% | |
| CTGCTTGAGTACGATAGACA+AGG | + | chr5_1:35105232-35105251 | Msa0728810:CDS | 45.0% | |
| TAAAGTCCACTTCTCCACCA+AGG | + | chr5_1:35105312-35105331 | Msa0728810:CDS | 45.0% | |
| AGTTATCCTTGGTGGAGAAG+TGG | - | chr5_1:35105321-35105340 | None:intergenic | 45.0% | |
| !!! | TGTGCTTTTGAGTTCATCCG+CGG | + | chr5_1:35105376-35105395 | Msa0728810:CDS | 45.0% |
| GCCTTGAAAACCCTTCTTCT+GGG | - | chr5_1:35105443-35105462 | None:intergenic | 45.0% | |
| TGCCTTGAAAACCCTTCTTC+TGG | - | chr5_1:35105444-35105463 | None:intergenic | 45.0% | |
| ! | GTTGATTCATCGACCGGTAA+AGG | - | chr5_1:35105520-35105539 | None:intergenic | 45.0% |
| TTACCGGTCGATGAATCAAC+TGG | + | chr5_1:35105520-35105539 | Msa0728810:CDS | 45.0% | |
| AGGGTCTTCCAAGAAGTTAC+TGG | + | chr5_1:35105590-35105609 | Msa0728810:CDS | 45.0% | |
| CTGGACAAGTTCAGAAACTC+TGG | - | chr5_1:35105632-35105651 | None:intergenic | 45.0% | |
| CAGAGTTTCTGAACTTGTCC+AGG | + | chr5_1:35105630-35105649 | Msa0728810:CDS | 45.0% | |
| TGTGCATAGTGATGCTAGCT+GGG | + | chr5_1:35105654-35105673 | Msa0728810:CDS | 45.0% | |
| TCATCATCAGCGAAATCGTG+TGG | - | chr5_1:35105688-35105707 | None:intergenic | 45.0% | |
| TGATGAAAGTGATGTTCCGG+TGG | + | chr5_1:35105702-35105721 | Msa0728810:CDS | 45.0% | |
| CAGATGTAGCAACTCCTTAC+TGG | + | chr5_1:35105725-35105744 | Msa0728810:CDS | 45.0% | |
| TAGCAACTCCTTACTGGGAA+AGG | + | chr5_1:35105731-35105750 | Msa0728810:CDS | 45.0% | |
| !! | TCCAATCTGGTGGTGTCATT+TGG | + | chr5_1:35105762-35105781 | Msa0728810:CDS | 45.0% |
| TCCAAATGACACCACCAGAT+TGG | - | chr5_1:35105766-35105785 | None:intergenic | 45.0% | |
| AGGATGTAACCACTGAGAAC+TGG | - | chr5_1:35105821-35105840 | None:intergenic | 45.0% | |
| GTGTGCTTAGATACATCTCG+TGG | + | chr5_1:35106140-35106159 | Msa0728810:intron | 45.0% | |
| TTCCCACTGTATTACGAGCA+TGG | + | chr5_1:35106338-35106357 | Msa0728810:CDS | 45.0% | |
| TGCCATGCTCGTAATACAGT+GGG | - | chr5_1:35106343-35106362 | None:intergenic | 45.0% | |
| ! | CTGTGTTTTGCAGGAACTTC+TGG | + | chr5_1:35106538-35106557 | Msa0728810:intron | 45.0% |
| !! | TACCGGTTCAGCGTTGTTTA+AGG | + | chr5_1:35107076-35107095 | Msa0728810:intron | 45.0% |
| CTGAACTGTCAACTAGGGAT+AGG | - | chr5_1:35107235-35107254 | None:intergenic | 45.0% | |
| CACAGATCAACATGTCATGG+GGG | - | chr5_1:35107525-35107544 | None:intergenic | 45.0% | |
| TGGGTATCAGACTGGGTAAT+AGG | + | chr5_1:35107672-35107691 | Msa0728810:intron | 45.0% | |
| ACAGGTGATTGCATGTGCTT+TGG | + | chr5_1:35108080-35108099 | Msa0728810:intron | 45.0% | |
| GAACTTCTGTGTAGCATAGG+TGG | + | chr5_1:35108117-35108136 | Msa0728810:intron | 45.0% | |
| TGTGGTCTGGAAACTTACCT+GGG | - | chr5_1:35108264-35108283 | None:intergenic | 45.0% | |
| ATAGATCGAGAAGATGCACG+AGG | - | chr5_1:35108492-35108511 | None:intergenic | 45.0% | |
| CTAGGTCATACGAGAGAGAA+AGG | - | chr5_1:35108983-35109002 | None:intergenic | 45.0% | |
| TCTCTCTCGTATGACCTAGT+AGG | + | chr5_1:35108984-35109003 | Msa0728810:intron | 45.0% | |
| ACACAATTTCCTCTCGTGCA+TGG | - | chr5_1:35109032-35109051 | None:intergenic | 45.0% | |
| ! | CTGGAGTAATGAAGGGTACA+AGG | + | chr5_1:35109100-35109119 | Msa0728810:CDS | 45.0% |
| CCAAGATGTAATGCAAAGCG+CGG | + | chr5_1:35109170-35109189 | Msa0728810:CDS | 45.0% | |
| ACAAAACCTGCAACCATGCA+CGG | - | chr5_1:35109197-35109216 | None:intergenic | 45.0% | |
| !! | CATAACTTGGGAGTGTTTGG+GGG | + | chr5_1:35109457-35109476 | Msa0728810:CDS | 45.0% |
| GCCAAATAGTCCGGTAATGA+TGG | - | chr5_1:35109500-35109519 | None:intergenic | 45.0% | |
| TAAGGAGTTGCTTCAGATCC+AGG | - | chr5_1:35109541-35109560 | None:intergenic | 45.0% | |
| GGAGCAGTGCTAATTGGAAT+TGG | + | chr5_1:35109598-35109617 | Msa0728810:CDS | 45.0% | |
| GCTTGAGGAACATCTTTGTG+AGG | - | chr5_1:35109754-35109773 | None:intergenic | 45.0% | |
| GCTGTAACATTTAGAGGCTG+GGG | - | chr5_1:35109872-35109891 | None:intergenic | 45.0% | |
| !!! | ATATTTATAAAATATTTTAC+CGG | + | chr5_1:35107794-35107813 | Msa0728810:intron | 5.0% |
| !!! | TTTATCATTTTTTAATAATT+TGG | + | chr5_1:35108144-35108163 | Msa0728810:intron | 5.0% |
| TGTCGCATCAATGGTAGTCG+AGG | + | chr5_1:35105198-35105217 | Msa0728810:exon | 50.0% | |
| GCAATGAAGCCAAGGAGCAA+GGG | + | chr5_1:35105284-35105303 | Msa0728810:CDS | 50.0% | |
| !!! | GTGCTTTTGAGTTCATCCGC+GGG | + | chr5_1:35105377-35105396 | Msa0728810:CDS | 50.0% |
| ! | GCCCAGAAGAAGGGTTTTCA+AGG | + | chr5_1:35105439-35105458 | Msa0728810:CDS | 50.0% |
| ! | CCTCCAGTTGATTCATCGAC+CGG | - | chr5_1:35105526-35105545 | None:intergenic | 50.0% |
| CGGTCGATGAATCAACTGGA+GGG | + | chr5_1:35105524-35105543 | Msa0728810:CDS | 50.0% | |
| CGATGAATCAACTGGAGGGT+TGG | + | chr5_1:35105528-35105547 | Msa0728810:CDS | 50.0% | |
| GAAACTCTGGCCCAACCAAT+TGG | - | chr5_1:35105619-35105638 | None:intergenic | 50.0% | |
| TAGCATCACTATGCACAGCC+TGG | - | chr5_1:35105651-35105670 | None:intergenic | 50.0% | |
| CTGTGCATAGTGATGCTAGC+TGG | + | chr5_1:35105653-35105672 | Msa0728810:CDS | 50.0% | |
| CGTTTGAGCCCATTTCACCA+CGG | + | chr5_1:35106097-35106116 | Msa0728810:intron | 50.0% | |
| GACAAATATGCCTGCTACCG+TGG | - | chr5_1:35106117-35106136 | None:intergenic | 50.0% | |
| CTGCCATGCTCGTAATACAG+TGG | - | chr5_1:35106344-35106363 | None:intergenic | 50.0% | |
| CACTGTATTACGAGCATGGC+AGG | + | chr5_1:35106342-35106361 | Msa0728810:CDS | 50.0% | |
| ATGGCAGGCACAGAACTTTC+TGG | + | chr5_1:35106357-35106376 | Msa0728810:CDS | 50.0% | |
| ! | GTTTTGCAGGAACTTCTGGC+TGG | + | chr5_1:35106542-35106561 | Msa0728810:intron | 50.0% |
| ATCGTGCAAGACGACAAGCT+AGG | - | chr5_1:35106613-35106632 | None:intergenic | 50.0% | |
| ! | TAGCTTGTCGTCTTGCACGA+TGG | + | chr5_1:35106612-35106631 | Msa0728810:CDS | 50.0% |
| AGCTTGTCGTCTTGCACGAT+GGG | + | chr5_1:35106613-35106632 | Msa0728810:CDS | 50.0% | |
| GTCTTGCACGATGGGATGAT+AGG | + | chr5_1:35106621-35106640 | Msa0728810:CDS | 50.0% | |
| AGACTGGGTAATAGGCAGTG+TGG | + | chr5_1:35107680-35107699 | Msa0728810:intron | 50.0% | |
| CTGTGGTCTGGAAACTTACC+TGG | - | chr5_1:35108265-35108284 | None:intergenic | 50.0% | |
| GAAGAGCAAGAAGCAGTTCG+AGG | + | chr5_1:35109132-35109151 | Msa0728810:CDS | 50.0% | |
| CCGCGCTTTGCATTACATCT+TGG | - | chr5_1:35109173-35109192 | None:intergenic | 50.0% | |
| GTGTTGGGAGCAGTGCTAAT+TGG | + | chr5_1:35109592-35109611 | Msa0728810:CDS | 50.0% | |
| CGTGAGTTTCTGCTTCGTGT+TGG | - | chr5_1:35109711-35109730 | None:intergenic | 50.0% | |
| CAGAAACTCACGCGCAAGTA+CGG | + | chr5_1:35109719-35109738 | Msa0728810:CDS | 50.0% | |
| TCACGCGCAAGTACGGAAAA+CGG | + | chr5_1:35109726-35109745 | Msa0728810:CDS | 50.0% | |
| TTCCTCAAGCTGCGTCAGTT+AGG | + | chr5_1:35109764-35109783 | Msa0728810:CDS | 50.0% | |
| AAGGGACGACTTGCACCATT+TGG | - | chr5_1:35109793-35109812 | None:intergenic | 50.0% | |
| GGCAATGAAGCCAAGGAGCA+AGG | + | chr5_1:35105283-35105302 | Msa0728810:CDS | 55.0% | |
| TTGAGTTCATCCGCGGGTCA+CGG | + | chr5_1:35105383-35105402 | Msa0728810:CDS | 55.0% | |
| CCGGTCGATGAATCAACTGG+AGG | + | chr5_1:35105523-35105542 | Msa0728810:CDS | 55.0% | |
| GGAGTTGCTACATCTGCCAC+CGG | - | chr5_1:35105721-35105740 | None:intergenic | 55.0% | |
| TCCTTACTGGGAAAGGCCAG+TGG | + | chr5_1:35105738-35105757 | Msa0728810:CDS | 55.0% | |
| CCTTACTGGGAAAGGCCAGT+GGG | + | chr5_1:35105739-35105758 | Msa0728810:CDS | 55.0% | |
| AAAGGCCAGTGGGTCCAATC+TGG | + | chr5_1:35105749-35105768 | Msa0728810:CDS | 55.0% | |
| ! | CATGGCTTGCCAGTTCTCAG+TGG | + | chr5_1:35105809-35105828 | Msa0728810:CDS | 55.0% |
| GCCTGCTACCGTGGTGAAAT+GGG | - | chr5_1:35106108-35106127 | None:intergenic | 55.0% | |
| TGCCTGCTACCGTGGTGAAA+TGG | - | chr5_1:35106109-35106128 | None:intergenic | 55.0% | |
| AATCCACCTGCGACTCGAAC+AGG | - | chr5_1:35106262-35106281 | None:intergenic | 55.0% | |
| !! | GAACTTCTAGGGCAGTCTGC+AGG | + | chr5_1:35106289-35106308 | Msa0728810:CDS | 55.0% |
| ! | TTGCAGGAACTTCTGGCTGG+TGG | + | chr5_1:35106545-35106564 | Msa0728810:intron | 55.0% |
| !! | TCTGAGAGTGTTGCGACCTG+AGG | + | chr5_1:35107193-35107212 | Msa0728810:intron | 55.0% |
| ATCGAGAAGATGCACGAGGC+AGG | - | chr5_1:35108488-35108507 | None:intergenic | 55.0% | |
| ATGGTCACTCCATGCACGAG+AGG | + | chr5_1:35109020-35109039 | Msa0728810:CDS | 55.0% | |
| GCGTCAGTTAGGCCACCAAA+TGG | + | chr5_1:35109775-35109794 | Msa0728810:CDS | 55.0% | |
| GGACGACTTGCACCATTTGG+TGG | - | chr5_1:35109790-35109809 | None:intergenic | 55.0% | |
| GCGGCACCGTTATTCCGTTG+CGG | + | chr5_1:35104279-35104298 | Msa0728810:five_prime_UTR | 60.0% | |
| GATGAGTCTTCCGTGACCCG+CGG | - | chr5_1:35105396-35105415 | None:intergenic | 60.0% | |
| !! | CCCACTGGCCTTTCCCAGTA+AGG | - | chr5_1:35105742-35105761 | None:intergenic | 60.0% |
| CACCACCAGATTGGACCCAC+TGG | - | chr5_1:35105757-35105776 | None:intergenic | 60.0% | |
| GCCCATTTCACCACGGTAGC+AGG | + | chr5_1:35106104-35106123 | Msa0728810:intron | 60.0% | |
| CAGGTTCCTGTTCGAGTCGC+AGG | + | chr5_1:35106253-35106272 | Msa0728810:intron | 60.0% | |
| GTTCCTGTTCGAGTCGCAGG+TGG | + | chr5_1:35106256-35106275 | Msa0728810:CDS | 60.0% | |
| ! | CAGGAACTTCTGGCTGGTGG+AGG | + | chr5_1:35106548-35106567 | Msa0728810:intron | 60.0% |
| TTTCGCAGTCACACTCGGGC+CGG | + | chr5_1:35109341-35109360 | Msa0728810:intron | 60.0% | |
| !! | TTGGGAGTGTTTGGGGGCTG+CGG | + | chr5_1:35109463-35109482 | Msa0728810:CDS | 60.0% |
| GGCCTAACTGACGCAGCTTG+AGG | - | chr5_1:35109769-35109788 | None:intergenic | 60.0% | |
| GGCCAGTGGGTCCAATCTGG+TGG | + | chr5_1:35105752-35105771 | Msa0728810:CDS | 65.0% | |
| TGCAAAGCGCGGTCCGTGCA+TGG | + | chr5_1:35109181-35109200 | Msa0728810:CDS | 65.0% | |
| CGCGGTCCGTGCATGGTTGC+AGG | + | chr5_1:35109188-35109207 | Msa0728810:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 35104264 | 35109998 | 35104264 | ID=Msa0728810;Name=Msa0728810 |
| chr5_1 | mRNA | 35104264 | 35109998 | 35104264 | ID=Msa0728810-mRNA-1;Parent=Msa0728810;Name=Msa0728810-mRNA-1;_AED=0.14;_eAED=0.14;_QI=232|1|1|1|0.85|0.75|8|158|573 |
| chr5_1 | exon | 35104264 | 35104402 | 35104264 | ID=Msa0728810-mRNA-1:exon:10849;Parent=Msa0728810-mRNA-1 |
| chr5_1 | exon | 35105115 | 35105909 | 35105115 | ID=Msa0728810-mRNA-1:exon:10850;Parent=Msa0728810-mRNA-1 |
| chr5_1 | exon | 35106256 | 35106444 | 35106256 | ID=Msa0728810-mRNA-1:exon:10851;Parent=Msa0728810-mRNA-1 |
| chr5_1 | exon | 35106551 | 35106642 | 35106551 | ID=Msa0728810-mRNA-1:exon:10852;Parent=Msa0728810-mRNA-1 |
| chr5_1 | exon | 35108024 | 35108083 | 35108024 | ID=Msa0728810-mRNA-1:exon:10853;Parent=Msa0728810-mRNA-1 |
| chr5_1 | exon | 35108196 | 35108265 | 35108196 | ID=Msa0728810-mRNA-1:exon:10854;Parent=Msa0728810-mRNA-1 |
| chr5_1 | exon | 35109006 | 35109209 | 35109006 | ID=Msa0728810-mRNA-1:exon:10855;Parent=Msa0728810-mRNA-1 |
| chr5_1 | exon | 35109436 | 35109998 | 35109436 | ID=Msa0728810-mRNA-1:exon:10856;Parent=Msa0728810-mRNA-1 |
| chr5_1 | five_prime_UTR | 35104264 | 35104402 | 35104264 | ID=Msa0728810-mRNA-1:five_prime_utr;Parent=Msa0728810-mRNA-1 |
| chr5_1 | five_prime_UTR | 35105115 | 35105207 | 35105115 | ID=Msa0728810-mRNA-1:five_prime_utr;Parent=Msa0728810-mRNA-1 |
| chr5_1 | CDS | 35105208 | 35105909 | 35105208 | ID=Msa0728810-mRNA-1:cds;Parent=Msa0728810-mRNA-1 |
| chr5_1 | CDS | 35106256 | 35106444 | 35106256 | ID=Msa0728810-mRNA-1:cds;Parent=Msa0728810-mRNA-1 |
| chr5_1 | CDS | 35106551 | 35106642 | 35106551 | ID=Msa0728810-mRNA-1:cds;Parent=Msa0728810-mRNA-1 |
| chr5_1 | CDS | 35108024 | 35108083 | 35108024 | ID=Msa0728810-mRNA-1:cds;Parent=Msa0728810-mRNA-1 |
| chr5_1 | CDS | 35108196 | 35108265 | 35108196 | ID=Msa0728810-mRNA-1:cds;Parent=Msa0728810-mRNA-1 |
| chr5_1 | CDS | 35109006 | 35109209 | 35109006 | ID=Msa0728810-mRNA-1:cds;Parent=Msa0728810-mRNA-1 |
| chr5_1 | CDS | 35109436 | 35109840 | 35109436 | ID=Msa0728810-mRNA-1:cds;Parent=Msa0728810-mRNA-1 |
| chr5_1 | three_prime_UTR | 35109841 | 35109998 | 35109841 | ID=Msa0728810-mRNA-1:three_prime_utr;Parent=Msa0728810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
