AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0734570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0734570 MtrunA17_Chr5g0431191 96.791 592 18 1 1 592 1 591 0.0 1197
Msa0734570 MtrunA17_Chr3g0105891 69.103 602 162 8 1 592 1 588 0.0 836
Msa0734570 MtrunA17_Chr1g0211611 32.609 276 173 6 316 586 285 552 1.56e-49 181
Msa0734570 MtrunA17_Chr3g0143531 34.866 261 159 6 331 586 22 276 2.99e-49 172
Msa0734570 MtrunA17_Chr5g0406251 26.772 508 303 17 125 584 58 544 6.88e-48 176
Msa0734570 MtrunA17_Chr1g0202101 33.591 259 160 6 327 580 276 527 1.03e-46 172
Msa0734570 MtrunA17_Chr3g0090261 32.000 275 171 6 320 584 68 336 1.80e-41 153
Msa0734570 MtrunA17_Chr4g0075541 28.428 299 186 9 302 584 55 341 6.80e-37 141
Msa0734570 MtrunA17_Chr4g0059121 28.261 276 178 7 321 584 45 312 1.10e-35 137
Msa0734570 MtrunA17_Chr2g0282321 27.273 319 199 11 278 586 124 419 3.43e-35 138
Msa0734570 MtrunA17_Chr3g0117731 28.049 246 165 5 345 584 72 311 4.28e-34 132
Msa0734570 MtrunA17_Chr7g0244621 28.102 274 180 7 325 584 36 306 4.91e-32 127
Msa0734570 MtrunA17_Chr4g0047211 26.295 251 169 7 345 586 54 297 4.47e-31 124
Msa0734570 MtrunA17_Chr4g0047191 26.295 251 169 7 345 586 59 302 5.84e-31 124
Msa0734570 MtrunA17_Chr1g0157231 28.761 226 149 5 327 547 139 357 1.30e-30 123
Msa0734570 MtrunA17_Chr3g0117811 26.136 264 167 5 345 584 75 334 2.23e-30 122
Msa0734570 MtrunA17_Chr4g0047201 27.670 206 139 5 384 586 260 458 3.30e-30 124
Msa0734570 MtrunA17_Chr4g0059181 26.515 264 166 6 345 584 104 363 9.23e-30 121
Msa0734570 MtrunA17_Chr1g0205071 25.606 289 182 5 325 584 69 353 9.81e-30 121
Msa0734570 MtrunA17_Chr8g0388891 29.455 275 157 7 320 584 119 366 1.18e-29 121
Msa0734570 MtrunA17_Chr6g0449241 28.000 275 180 7 326 586 18 288 3.52e-29 119
Msa0734570 MtrunA17_Chr2g0305141 30.070 286 172 13 330 592 1080 1360 1.10e-28 122
Msa0734570 MtrunA17_Chr5g0394681 30.811 185 122 2 402 584 181 361 4.64e-28 116
Msa0734570 MtrunA17_Chr4g0065211 29.478 268 167 11 330 580 1118 1380 5.68e-28 120
Msa0734570 MtrunA17_Chr3g0116981 28.000 275 178 9 326 585 18 287 6.90e-28 115
Msa0734570 MtrunA17_Chr6g0461841 30.576 278 163 13 328 584 962 1230 4.25e-27 117
Msa0734570 MtrunA17_Chr4g0068411 26.721 247 169 5 338 577 464 705 5.12e-27 116
Msa0734570 MtrunA17_Chr6g0450871 26.515 264 166 6 345 584 87 346 1.83e-26 111
Msa0734570 MtrunA17_Chr4g0072741 28.231 294 182 11 309 580 808 1094 2.76e-26 114
Msa0734570 MtrunA17_Chr2g0310761 29.304 273 165 11 328 580 934 1198 3.59e-25 111
Msa0734570 MtrunA17_Chr2g0294351 25.984 254 176 5 338 584 470 718 7.93e-25 109
Msa0734570 MtrunA17_Chr1g0196631 28.782 271 165 12 330 580 897 1159 2.85e-24 108
Msa0734570 MtrunA17_Chr5g0427651 26.909 275 172 9 327 584 638 900 4.08e-24 107
Msa0734570 MtrunA17_Chr8g0357611 28.674 279 168 11 328 584 1364 1633 7.49e-24 107
Msa0734570 MtrunA17_Chr5g0397931 24.806 258 184 4 334 585 423 676 3.04e-23 104
Msa0734570 MtrunA17_Chr1g0191171 24.231 260 184 6 338 590 693 946 1.53e-22 102
Msa0734570 MtrunA17_Chr2g0310781 27.437 277 173 11 328 584 840 1108 1.69e-22 102
Msa0734570 MtrunA17_Chr8g0392871 24.275 276 196 7 322 590 727 996 2.56e-22 102
Msa0734570 MtrunA17_Chr1g0151541 25.357 280 179 9 323 586 652 917 3.63e-22 101
Msa0734570 MtrunA17_Chr6g0482711 23.827 277 196 7 322 590 648 917 3.23e-21 98.6
Msa0734570 MtrunA17_Chr3g0132791 24.731 279 175 8 329 584 641 907 5.83e-21 97.8
Msa0734570 MtrunA17_Chr1g0179331 24.427 262 181 7 338 587 559 815 9.47e-20 93.6
Msa0734570 MtrunA17_Chr1g0171451 24.324 259 180 7 338 586 418 670 1.78e-19 92.4
Msa0734570 MtrunA17_Chr4g0042731 25.091 275 182 10 327 584 134 401 4.42e-19 90.1
Msa0734570 MtrunA17_Chr2g0284901 25.267 281 187 12 323 589 142 413 5.28e-18 87.0
Msa0734570 MtrunA17_Chr8g0380551 26.613 248 162 10 351 584 244 485 7.57e-18 87.0
Msa0734570 MtrunA17_Chr3g0136131 22.727 286 191 9 323 584 76 355 1.58e-17 84.7
Msa0734570 MtrunA17_Chr5g0403721 23.697 211 142 9 384 585 43 243 3.08e-16 80.5
Msa0734570 MtrunA17_Chr6g0455651 25.940 266 164 10 336 580 118 371 1.64e-15 79.0
Msa0734570 MtrunA17_Chr1g0205931 24.815 270 173 9 338 588 59 317 2.57e-15 79.3
Msa0734570 MtrunA17_Chr7g0237401 25.347 288 171 10 340 591 99 378 4.83e-15 77.8
Msa0734570 MtrunA17_Chr5g0424501 23.228 254 176 8 338 581 196 440 1.76e-14 76.3
Msa0734570 MtrunA17_Chr3g0091461 25.660 265 173 9 345 592 819 1076 2.00e-14 77.0
Msa0734570 MtrunA17_Chr3g0115171 24.057 212 154 6 363 574 320 524 2.21e-14 76.3
Msa0734570 MtrunA17_Chr1g0201241 25.000 260 166 7 351 586 746 1000 3.02e-14 76.3
Msa0734570 MtrunA17_Chr2g0317001 24.335 263 183 9 328 581 7 262 3.98e-14 75.9
Msa0734570 MtrunA17_Chr4g0063691 26.633 199 132 7 336 524 540 734 1.56e-13 73.9
Msa0734570 MtrunA17_Chr4g0051191 23.874 222 159 6 361 579 199 413 2.54e-13 72.4
Msa0734570 MtrunA17_Chr2g0288121 27.500 200 127 6 340 526 48 242 2.84e-13 71.6
Msa0734570 MtrunA17_Chr4g0000431 24.354 271 182 10 327 581 17 280 3.23e-13 72.8
Msa0734570 MtrunA17_Chr5g0447731 24.627 268 170 10 333 581 22 276 3.48e-13 70.5
Msa0734570 MtrunA17_Chr4g0061201 24.719 267 168 9 345 585 823 1082 3.88e-13 72.8
Msa0734570 MtrunA17_Chr6g0467281 27.962 211 128 8 336 530 489 691 4.75e-13 72.4
Msa0734570 MtrunA17_Chr5g0413071 24.917 301 169 11 322 582 300 583 1.15e-12 70.9
Msa0734570 MtrunA17_Chr1g0191631 28.500 200 128 6 345 535 166 359 1.15e-12 70.5
Msa0734570 MtrunA17_Chr4g0038091 23.970 267 176 9 338 591 24 276 1.76e-12 70.9
Msa0734570 MtrunA17_Chr3g0137191 28.906 256 148 12 354 585 91 336 2.30e-12 68.9
Msa0734570 MtrunA17_Chr3g0137741 26.442 208 132 7 336 530 494 693 2.32e-12 70.1
Msa0734570 MtrunA17_Chr6g0453001 28.788 198 117 7 350 535 85 270 2.33e-12 69.3
Msa0734570 MtrunA17_Chr4g0038501 23.596 267 177 9 338 591 24 276 2.62e-12 70.1
Msa0734570 MtrunA17_Chr8g0340891 24.101 278 172 10 336 584 567 834 2.82e-12 69.7
Msa0734570 MtrunA17_Chr8g0347481 24.153 236 154 8 372 584 272 505 3.09e-12 69.3
Msa0734570 MtrunA17_Chr2g0296591 26.357 258 143 11 369 586 981 1231 3.55e-12 69.7
Msa0734570 MtrunA17_Chr2g0333691 27.917 240 141 11 369 585 162 392 3.91e-12 68.6
Msa0734570 MtrunA17_Chr2g0324931 30.992 242 132 13 310 527 664 894 4.91e-12 69.3
Msa0734570 MtrunA17_Chr1g0189791 26.217 267 163 10 345 584 86 345 5.61e-12 68.6
Msa0734570 MtrunA17_Chr4g0031601 26.667 240 131 11 379 584 146 374 6.34e-12 68.2
Msa0734570 MtrunA17_Chr7g0217041 26.250 240 148 10 311 527 492 725 8.60e-12 68.2
Msa0734570 MtrunA17_Chr5g0441021 26.394 269 158 9 351 591 102 358 9.78e-12 67.4
Msa0734570 MtrunA17_Chr3g0143961 25.455 275 168 8 340 584 74 341 1.08e-11 67.0
Msa0734570 MtrunA17_Chr1g0158391 27.778 216 118 10 335 527 258 458 1.09e-11 67.8
Msa0734570 MtrunA17_Chr7g0245571 25.952 289 170 13 329 584 91 368 1.28e-11 67.0
Msa0734570 MtrunA17_Chr6g0467301 27.230 213 131 8 336 532 494 698 1.47e-11 67.4
Msa0734570 MtrunA17_Chr4g0064201 29.299 157 101 4 384 535 174 325 1.59e-11 66.6
Msa0734570 MtrunA17_Chr7g0251771 28.986 207 123 7 340 530 57 255 1.60e-11 66.6
Msa0734570 MtrunA17_Chr8g0362661 25.778 225 136 7 384 584 197 414 1.62e-11 67.0
Msa0734570 MtrunA17_Chr3g0093381 27.984 243 141 8 370 584 153 389 2.08e-11 66.2
Msa0734570 MtrunA17_Chr5g0439621 23.529 289 156 12 345 586 457 727 2.16e-11 67.0
Msa0734570 MtrunA17_Chr1g0161721 27.155 232 143 9 315 527 559 783 2.73e-11 66.6
Msa0734570 MtrunA17_Chr3g0129771 22.490 249 169 9 333 566 32 271 2.74e-11 66.6
Msa0734570 MtrunA17_Chr6g0467701 28.230 209 126 9 335 527 35 235 2.83e-11 65.5
Msa0734570 MtrunA17_Chr1g0158771 26.794 209 129 9 335 527 290 490 2.94e-11 66.2
Msa0734570 MtrunA17_Chr2g0321841 22.015 268 190 7 332 588 2 261 3.00e-11 66.6
Msa0734570 MtrunA17_Chr7g0225201 23.282 262 181 9 333 581 26 280 3.09e-11 64.7
Msa0734570 MtrunA17_Chr3g0104091 28.283 198 118 7 350 535 84 269 3.13e-11 65.9
Msa0734570 MtrunA17_Chr6g0467681 28.704 216 116 10 335 527 265 465 3.26e-11 66.2
Msa0734570 MtrunA17_Chr5g0439601 22.476 307 178 12 328 586 306 600 3.41e-11 66.2
Msa0734570 MtrunA17_Chr4g0022331 22.456 285 181 10 335 587 533 809 3.70e-11 66.2
Msa0734570 MtrunA17_Chr5g0423891 24.911 281 169 9 335 584 164 433 3.79e-11 65.9
Msa0734570 MtrunA17_Chr4g0047561 26.267 217 134 8 329 529 42 248 3.87e-11 65.1
Msa0734570 MtrunA17_Chr1g0158531 26.852 216 130 8 336 533 292 497 4.30e-11 65.9
Msa0734570 MtrunA17_Chr6g0487571 24.567 289 164 14 340 586 577 853 4.51e-11 65.9
Msa0734570 MtrunA17_Chr7g0238671 29.630 189 116 6 350 529 104 284 4.70e-11 65.1
Msa0734570 MtrunA17_Chr2g0314611 27.692 195 124 8 345 530 500 686 5.15e-11 65.9
Msa0734570 MtrunA17_Chr6g0467661 28.704 216 116 10 335 527 265 465 5.89e-11 65.5
Msa0734570 MtrunA17_Chr1g0149381 27.143 210 127 10 336 530 504 702 5.98e-11 65.5
Msa0734570 MtrunA17_Chr3g0116811 21.455 275 185 10 331 588 23 283 6.67e-11 65.1
Msa0734570 MtrunA17_Chr3g0088341 27.064 218 119 10 335 527 279 481 7.49e-11 65.1
Msa0734570 MtrunA17_Chr8g0340871 24.549 277 171 12 336 584 578 844 8.24e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0734570 AT5G58520.1 60.848 613 208 9 1 590 1 604 0.0 727
Msa0734570 AT5G07140.1 59.328 595 225 7 1 590 1 583 0.0 667
Msa0734570 AT2G17700.1 32.852 277 171 6 317 586 269 537 4.72e-51 184
Msa0734570 AT4G35780.1 34.066 273 163 8 322 586 280 543 3.34e-49 180
Msa0734570 AT4G38470.2 31.392 309 192 8 289 584 238 539 4.12e-48 177
Msa0734570 AT4G38470.1 31.392 309 192 8 289 584 238 539 5.32e-48 177
Msa0734570 AT4G31170.7 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0734570 AT4G31170.6 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0734570 AT4G31170.5 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0734570 AT4G31170.1 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0734570 AT4G31170.2 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0734570 AT4G31170.3 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0734570 AT4G31170.8 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0734570 AT1G62400.1 29.252 294 182 8 306 584 58 340 8.19e-38 144
Msa0734570 AT5G58950.1 27.374 358 211 13 249 586 137 465 8.14e-37 144
Msa0734570 AT4G38470.3 30.712 267 165 8 289 542 238 497 1.97e-35 140
Msa0734570 AT2G24360.1 32.520 246 154 5 345 584 145 384 1.14e-34 136
Msa0734570 AT3G27560.1 28.000 275 180 8 326 586 18 288 2.45e-31 125
Msa0734570 AT4G14780.1 27.083 288 178 6 325 584 52 335 2.24e-30 122
Msa0734570 AT5G50000.1 26.136 264 167 5 345 584 97 356 1.09e-29 121
Msa0734570 AT5G01850.1 29.078 282 180 9 319 584 2 279 2.00e-29 119
Msa0734570 AT3G22750.1 25.260 289 183 5 325 584 65 349 4.04e-29 119
Msa0734570 AT3G24715.1 31.636 275 160 12 330 584 833 1099 5.38e-29 123
Msa0734570 AT3G24715.3 31.636 275 160 12 330 584 833 1099 5.38e-29 123
Msa0734570 AT3G24715.2 31.636 275 160 12 330 584 833 1099 5.38e-29 123
Msa0734570 AT5G40540.1 27.698 278 177 9 326 586 18 288 4.18e-28 116
Msa0734570 AT5G57610.1 30.112 269 161 10 332 580 779 1040 6.92e-28 120
Msa0734570 AT3G01490.1 25.000 264 170 5 345 584 123 382 1.36e-27 115
Msa0734570 AT5G50180.1 27.240 279 185 9 326 590 12 286 1.36e-27 114
Msa0734570 AT3G46930.2 26.190 252 162 7 345 584 216 455 1.92e-27 116
Msa0734570 AT3G46930.1 26.190 252 162 7 345 584 181 420 2.39e-27 116
Msa0734570 AT3G63260.1 24.907 269 169 5 345 584 98 362 1.22e-26 112
Msa0734570 AT5G01850.2 31.068 206 132 5 386 584 101 303 2.88e-26 110
Msa0734570 AT2G35050.1 28.938 273 166 10 328 580 968 1232 3.40e-26 114
Msa0734570 AT2G35050.2 28.938 273 166 10 328 580 968 1232 3.40e-26 114
Msa0734570 AT3G46920.1 28.470 281 179 11 319 581 790 1066 6.71e-26 113
Msa0734570 AT3G46920.2 28.470 281 179 11 319 581 856 1132 7.26e-26 113
Msa0734570 AT5G40540.2 29.577 213 133 7 384 586 7 212 2.63e-25 106
Msa0734570 AT5G49470.1 26.378 254 175 6 338 584 208 456 4.32e-25 109
Msa0734570 AT1G67890.1 27.799 259 168 8 338 586 491 740 4.88e-25 110
Msa0734570 AT5G49470.3 26.172 256 177 6 338 586 495 745 9.98e-25 109
Msa0734570 AT5G49470.4 26.172 256 177 6 338 586 469 719 1.19e-24 109
Msa0734570 AT5G49470.7 26.172 256 177 6 338 586 368 618 1.64e-24 108
Msa0734570 AT5G66710.1 27.239 268 174 10 328 580 65 326 7.86e-24 104
Msa0734570 AT1G08720.1 24.809 262 184 6 336 590 671 926 1.83e-23 105
Msa0734570 AT3G06630.2 25.385 260 182 6 332 584 432 686 2.77e-23 105
Msa0734570 AT1G04700.1 27.500 280 170 11 334 587 766 1038 3.68e-23 105
Msa0734570 AT1G04700.2 27.500 280 170 11 334 587 766 1038 3.68e-23 105
Msa0734570 AT1G16270.1 28.777 278 168 12 328 584 858 1126 4.02e-23 105
Msa0734570 AT1G16270.2 28.777 278 168 12 328 584 858 1126 4.02e-23 105
Msa0734570 AT1G16270.3 28.777 278 168 12 328 584 858 1126 4.02e-23 105
Msa0734570 AT5G11850.1 23.792 269 193 5 323 584 598 861 5.34e-23 104
Msa0734570 AT1G18160.1 27.820 266 168 10 334 586 715 969 8.00e-23 103
Msa0734570 AT3G06620.1 25.000 260 183 6 332 584 492 746 9.76e-23 103
Msa0734570 AT4G23050.1 22.264 265 192 6 334 590 467 725 9.91e-23 103
Msa0734570 AT4G23050.2 22.264 265 192 6 334 590 468 726 1.03e-22 103
Msa0734570 AT3G06640.1 25.000 260 183 6 332 584 444 698 1.11e-22 103
Msa0734570 AT5G40540.3 29.592 196 123 6 401 586 1 191 1.29e-22 98.2
Msa0734570 AT3G06640.2 25.000 260 183 6 332 584 444 698 1.34e-22 102
Msa0734570 AT3G06640.3 25.000 260 183 6 332 584 444 698 1.34e-22 102
Msa0734570 AT1G79570.2 28.727 275 168 11 330 584 961 1227 2.00e-22 102
Msa0734570 AT1G79570.1 28.727 275 168 11 330 584 961 1227 2.00e-22 102
Msa0734570 AT5G03730.2 24.615 260 182 5 334 584 551 805 5.60e-22 101
Msa0734570 AT5G03730.1 24.615 260 182 5 334 584 551 805 5.60e-22 101
Msa0734570 AT1G73660.1 25.180 278 194 6 315 584 729 1000 5.65e-22 101
Msa0734570 AT1G67890.4 27.801 241 155 8 338 568 363 594 2.23e-21 99.0
Msa0734570 AT1G67890.3 27.801 241 155 8 338 568 491 722 2.25e-21 99.0
Msa0734570 AT1G67890.2 27.801 241 155 8 338 568 491 722 2.25e-21 99.0
Msa0734570 AT4G24480.2 25.091 275 177 8 327 584 661 923 4.10e-21 98.6
Msa0734570 AT4G24480.3 25.091 275 177 8 327 584 661 923 4.62e-21 98.6
Msa0734570 AT1G14000.1 28.372 215 139 7 379 584 212 420 5.31e-21 96.7
Msa0734570 AT4G24480.1 25.714 280 174 10 327 584 661 928 1.22e-20 97.1
Msa0734570 AT3G06630.1 25.000 244 171 6 332 568 432 670 1.23e-20 96.7
Msa0734570 AT4G18950.2 25.000 276 184 12 323 584 147 413 1.38e-19 92.0
Msa0734570 AT4G18950.1 25.000 276 184 12 323 584 147 413 1.40e-19 92.4
Msa0734570 AT1G08720.2 24.268 239 169 5 336 567 671 904 2.80e-19 92.8
Msa0734570 AT3G50720.1 25.461 271 175 11 328 580 42 303 3.44e-19 90.1
Msa0734570 AT3G50730.1 25.455 275 179 10 328 584 30 296 5.41e-19 89.7
Msa0734570 AT1G18160.2 27.126 247 156 10 334 567 715 950 1.35e-18 90.5
Msa0734570 AT1G74360.1 27.660 282 165 11 336 586 814 1087 4.94e-18 89.0
Msa0734570 AT5G40540.4 24.419 258 165 8 326 569 18 259 9.60e-18 84.3
Msa0734570 AT5G50000.2 26.577 222 133 6 345 540 97 314 1.02e-17 85.1
Msa0734570 AT3G46930.3 25.000 200 127 6 345 533 216 403 9.78e-17 83.2
Msa0734570 AT3G46930.4 25.000 200 127 6 345 533 216 403 9.98e-17 83.2
Msa0734570 AT3G46930.6 25.000 200 127 6 345 533 120 307 1.29e-16 82.0
Msa0734570 AT3G46930.5 25.000 200 127 6 345 533 181 368 2.10e-16 82.0
Msa0734570 AT3G06030.1 25.385 260 172 6 338 581 72 325 3.21e-16 82.8
Msa0734570 AT1G09000.2 25.670 261 166 7 340 581 75 326 3.86e-16 82.4
Msa0734570 AT1G09000.1 25.670 261 166 7 340 581 75 326 3.94e-16 82.4
Msa0734570 AT1G54960.1 24.419 258 173 7 340 581 74 325 6.07e-16 81.6
Msa0734570 AT1G54960.2 24.419 258 173 7 340 581 74 325 6.07e-16 81.6
Msa0734570 AT4G08470.1 25.600 250 172 9 340 581 309 552 7.99e-16 81.3
Msa0734570 AT2G31800.1 23.944 284 183 11 323 584 182 454 1.44e-15 80.1
Msa0734570 AT4G08470.3 25.200 250 173 9 340 581 227 470 1.94e-15 79.7
Msa0734570 AT3G59830.1 25.957 235 151 7 363 584 231 455 3.07e-15 79.0
Msa0734570 AT3G06630.4 24.651 215 150 6 332 539 432 641 6.05e-15 78.6
Msa0734570 AT3G06630.3 24.651 215 150 6 332 539 432 641 6.05e-15 78.6
Msa0734570 AT3G06630.5 24.651 215 150 6 332 539 432 641 6.05e-15 78.6
Msa0734570 AT4G31170.9 31.013 158 101 4 345 496 146 301 7.16e-15 76.3
Msa0734570 AT4G31170.10 31.013 158 101 4 345 496 146 301 7.16e-15 76.3
Msa0734570 AT4G31170.4 31.013 158 101 4 345 496 146 301 7.16e-15 76.3
Msa0734570 AT4G08480.1 26.761 213 146 6 371 581 546 750 8.54e-15 78.2
Msa0734570 AT4G08500.1 26.066 211 150 6 371 581 378 582 9.43e-15 77.8
Msa0734570 AT3G63260.2 23.744 219 134 5 345 534 98 312 1.15e-14 76.3
Msa0734570 AT3G06630.6 24.651 215 150 6 332 539 348 557 1.34e-14 77.4
Msa0734570 AT5G49470.5 25.121 207 143 6 338 537 495 696 1.35e-14 77.4
Msa0734570 AT5G41730.2 24.895 237 150 8 372 584 274 506 1.48e-14 77.4
Msa0734570 AT5G41730.1 24.895 237 150 8 372 584 274 506 1.48e-14 77.4
Msa0734570 AT5G49470.6 25.121 207 143 6 338 537 495 696 1.51e-14 77.4
Msa0734570 AT3G58640.1 23.759 282 171 10 325 585 544 802 1.81e-14 77.4
Msa0734570 AT3G58640.2 23.759 282 171 10 325 585 544 802 1.81e-14 77.4
Msa0734570 AT3G01490.2 23.364 214 136 5 345 534 123 332 3.45e-14 74.7
Msa0734570 AT1G64300.2 26.891 238 147 10 372 584 274 509 6.74e-14 75.5
Msa0734570 AT1G64300.1 26.891 238 147 10 372 584 274 509 6.74e-14 75.5
Msa0734570 AT5G49470.2 26.812 138 97 2 447 584 671 804 6.78e-14 75.5
Msa0734570 AT1G69790.2 27.376 263 150 10 351 586 105 353 1.06e-13 73.6
Msa0734570 AT1G69790.1 27.376 263 150 10 351 586 116 364 1.35e-13 73.2
Msa0734570 AT3G07980.1 25.746 268 170 10 338 591 24 276 4.46e-13 73.2
Msa0734570 AT3G07980.2 25.746 268 170 10 338 591 24 276 5.09e-13 72.8
Msa0734570 AT1G63700.1 22.642 212 157 4 371 581 446 651 5.29e-13 72.8
Msa0734570 AT1G63700.2 22.642 212 157 4 371 581 446 651 5.29e-13 72.8
Msa0734570 AT1G34110.2 24.670 227 141 7 384 586 831 1051 6.52e-13 72.4
Msa0734570 AT3G15220.1 23.506 251 178 8 338 581 19 262 6.89e-13 72.0
Msa0734570 AT1G34110.1 24.670 227 141 7 384 586 831 1051 8.09e-13 72.0
Msa0734570 AT5G54590.3 25.362 276 165 10 336 584 115 376 9.45e-13 70.9
Msa0734570 AT5G54590.4 25.362 276 165 10 336 584 115 376 9.45e-13 70.9
Msa0734570 AT5G54590.2 25.362 276 165 10 336 584 115 376 9.45e-13 70.9
Msa0734570 AT1G54820.1 25.175 286 167 12 345 590 159 437 1.30e-12 70.5
Msa0734570 AT4G11900.1 22.545 275 178 10 338 584 541 808 1.43e-12 71.2
Msa0734570 AT4G11900.9 22.545 275 178 10 338 584 472 739 1.51e-12 71.2
Msa0734570 AT3G13530.1 23.596 267 177 9 338 591 24 276 2.91e-12 70.5
Msa0734570 AT3G58760.3 23.715 253 172 10 344 584 244 487 3.47e-12 69.7
Msa0734570 AT3G58760.5 23.715 253 172 10 344 584 244 487 3.47e-12 69.7
Msa0734570 AT3G58760.1 23.715 253 172 10 344 584 181 424 3.57e-12 69.3
Msa0734570 AT3G58690.1 29.442 197 117 9 345 527 102 290 3.57e-12 68.9
Msa0734570 AT1G54820.2 27.358 212 126 9 345 535 159 363 5.80e-12 68.2
Msa0734570 AT5G56460.1 26.360 239 143 9 370 581 121 353 6.78e-12 68.2
Msa0734570 AT1G01450.1 25.541 231 146 9 379 584 71 300 7.57e-12 68.2
Msa0734570 AT1G34300.1 27.619 210 127 8 336 530 486 685 1.12e-11 68.6
Msa0734570 AT4G04510.1 24.028 283 180 11 328 584 333 606 1.52e-11 67.8
Msa0734570 AT4G04510.2 24.028 283 180 11 328 584 335 608 2.01e-11 67.4
Msa0734570 AT4G28490.1 26.027 292 171 13 331 584 680 964 2.12e-11 67.8
Msa0734570 AT3G04690.1 25.000 260 165 11 345 581 532 784 2.52e-11 67.4
Msa0734570 AT5G15080.1 29.299 157 102 4 384 535 205 357 2.64e-11 66.6
Msa0734570 AT1G10620.1 25.000 200 134 7 345 536 385 576 2.93e-11 67.0
Msa0734570 AT5G02290.2 30.387 181 105 7 370 536 113 286 3.34e-11 65.9
Msa0734570 AT5G02290.1 30.387 181 105 7 370 536 113 286 3.34e-11 65.9
Msa0734570 AT3G01300.1 30.405 148 94 4 384 526 199 342 3.39e-11 66.2
Msa0734570 AT1G17230.1 22.179 257 172 7 351 584 821 1072 3.48e-11 67.0
Msa0734570 AT1G53165.3 23.904 251 177 8 338 581 19 262 3.57e-11 66.6
Msa0734570 AT1G53165.1 23.904 251 177 8 338 581 19 262 3.87e-11 66.6
Msa0734570 AT1G53165.2 23.904 251 177 8 338 581 19 262 3.88e-11 66.6
Msa0734570 AT1G17230.2 22.179 257 172 7 351 584 821 1072 4.86e-11 66.6
Msa0734570 AT3G51990.1 22.264 265 172 8 345 584 74 329 5.06e-11 65.1
Msa0734570 AT5G28680.1 25.000 260 165 11 345 581 536 788 6.77e-11 65.9
Msa0734570 AT5G28680.2 25.000 260 165 11 345 581 536 788 6.77e-11 65.9
Msa0734570 AT5G58350.1 25.592 211 139 7 333 531 18 222 7.53e-11 65.5
Msa0734570 AT3G18750.1 22.619 252 165 9 333 566 27 266 7.82e-11 65.5
Msa0734570 AT3G18750.3 22.619 252 165 9 333 566 27 266 7.82e-11 65.5
Msa0734570 AT3G18750.5 22.619 252 165 9 333 566 27 266 7.82e-11 65.5
Msa0734570 AT3G06230.1 25.466 161 109 5 421 574 137 293 7.94e-11 63.9
Msa0734570 AT1G49160.2 22.800 250 167 8 333 566 27 266 9.83e-11 65.1

Find 166 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGTCTCTGTCACGCTTTC+AGG 0.084916 5_1:+48772671 None:intergenic
AGTTTCAAGGGGAGAGAATT+AGG 0.131548 5_1:-48775097 Msa0734570:CDS
CACATTCACAGAACCCATTT+TGG 0.137861 5_1:+48775156 None:intergenic
CTTGCAACGCGCTCGTTTCA+TGG 0.161083 5_1:-48775348 Msa0734570:CDS
GAATGCTTGTTTGGGAAATA+TGG 0.212461 5_1:-48774516 Msa0734570:CDS
GATTGTTACTATTATTATTA+AGG 0.240120 5_1:+48776528 None:intergenic
ATAGTTATGGCATGGTAATT+TGG 0.251431 5_1:-48772634 Msa0734570:CDS
TGCTTCTCCAACACTCTTGC+AGG 0.275365 5_1:+48774481 None:intergenic
GTTTCAAGGGGAGAGAATTA+GGG 0.284749 5_1:-48775096 Msa0734570:CDS
TGAGCTCCACAAAGATCTTC+TGG 0.287634 5_1:-48774795 Msa0734570:CDS
ATTGGACCTAATTCTTATAA+AGG 0.292494 5_1:-48774887 Msa0734570:CDS
TGCGATAAAGAAGCCCAAAA+TGG 0.301923 5_1:-48775170 Msa0734570:CDS
TAGTTATGGCATGGTAATTT+GGG 0.304405 5_1:-48772633 Msa0734570:CDS
TGGCAGTCCTTGGGAACTTC+AGG 0.306822 5_1:+48772530 None:intergenic
TAGGCATGGGAATGCTTGTT+TGG 0.318792 5_1:-48774525 Msa0734570:CDS
TTGGACCTAATTCTTATAAA+GGG 0.323834 5_1:-48774886 Msa0734570:CDS
ATGAGCAATGTTTATAGTTA+TGG 0.334957 5_1:-48772647 Msa0734570:CDS
GTTTCTTCACATCAAGTTGA+TGG 0.337096 5_1:-48775476 Msa0734570:CDS
GAGAAGAAAGGTTTCACCTT+AGG 0.338642 5_1:-48775265 Msa0734570:CDS
GGGTTGTTCTTCTTGTAGTT+AGG 0.343784 5_1:-48775243 Msa0734570:CDS
ATGCTAGAAATAAGATTATC+AGG 0.346471 5_1:+48776422 None:intergenic
GAGAATTGAGGACGTTTAGA+AGG 0.350236 5_1:+48772464 None:intergenic
TAGACCCCTTTATAAGAATT+AGG 0.355185 5_1:+48774881 None:intergenic
GATGAGCATGGAAGAGTCTT+TGG 0.362735 5_1:+48776622 None:intergenic
GTGAATGTGAAGCTTTCATT+TGG 0.366497 5_1:-48775142 Msa0734570:CDS
GGTTGAAAACAGATAATTGC+AGG 0.369964 5_1:-48772698 Msa0734570:intron
TGTTCAACTGTGTCTTCATC+GGG 0.371516 5_1:+48776716 None:intergenic
AAGCTGAAAGGGTGTGAAAA+AGG 0.373240 5_1:-48774833 Msa0734570:CDS
GGGAGAGAATTAGGGGAGAT+TGG 0.373979 5_1:-48775088 Msa0734570:CDS
AAGCTTTCATTTGGACTTTG+TGG 0.376985 5_1:-48775133 Msa0734570:CDS
GAACAAGAAGCTTCAGAGTA+AGG 0.378267 5_1:-48774648 Msa0734570:CDS
TAAATTTGGTTGGCAGTCCT+TGG 0.381450 5_1:+48772520 None:intergenic
CACTACCACCCACCACCTTT+TGG 0.383600 5_1:-48776832 Msa0734570:five_prime_UTR
TTATCAGGAAGCTGAGTTCC+AGG 0.384759 5_1:+48776437 None:intergenic
TTCTTCTAAGAAACTTGCTT+GGG 0.388623 5_1:-48776492 Msa0734570:CDS
GCGTCTGAAGCTGAATCTTT+TGG 0.390642 5_1:+48775026 None:intergenic
CCTTGGGAACTTCAGGTCTA+AGG 0.390694 5_1:+48772537 None:intergenic
AGAAGAAAGGTTTCACCTTA+GGG 0.393038 5_1:-48775264 Msa0734570:CDS
ATTTGGACTTTGTGGGTGTC+AGG 0.393965 5_1:-48775125 Msa0734570:CDS
CTTCTTCTAAGAAACTTGCT+TGG 0.396933 5_1:-48776493 Msa0734570:CDS
GCGAGTTGGCCAGCACTCTA+AGG 0.397140 5_1:+48776754 None:intergenic
TGGTCATGATGGTGAGGTTC+AGG 0.404945 5_1:-48775401 Msa0734570:CDS
TTGTTCAACTGTGTCTTCAT+CGG 0.412101 5_1:+48776715 None:intergenic
CACTCTAAGGCTGCAGCCAT+TGG 0.416983 5_1:+48776767 None:intergenic
AAGGGGTCTACATGGGCAAA+AGG 0.417460 5_1:-48774868 Msa0734570:CDS
ATTGGAGAAGATAGTGGTAG+TGG 0.419042 5_1:-48775070 Msa0734570:CDS
CGCAGAGGATTCTGTTAGAT+AGG 0.420687 5_1:-48774544 Msa0734570:CDS
TTCTGCACTTTCTCCTGTGC+AGG 0.423025 5_1:-48772585 Msa0734570:CDS
AGAACTGCAGAATGTTTCTA+TGG 0.424331 5_1:+48774756 None:intergenic
ATGCCAACTGCTGCCTGCAC+AGG 0.425742 5_1:+48772572 None:intergenic
ATGTCTCTGTCACGCTTTCA+GGG 0.428964 5_1:+48772672 None:intergenic
CTGTGCCCTCTTGCTACAAA+TGG 0.429078 5_1:+48775294 None:intergenic
AGTATGAAACTGATGGTTAT+AGG 0.442176 5_1:-48774454 Msa0734570:CDS
CAAGTTGATGGAACAGGCAT+TGG 0.443439 5_1:-48775464 Msa0734570:CDS
GTTGAGTTTACAGAACAGAT+TGG 0.447078 5_1:-48774905 Msa0734570:CDS
TACCTCATCTTTCATTGTAT+CGG 0.450015 5_1:-48774996 Msa0734570:CDS
AGGCATGGGAATGCTTGTTT+GGG 0.450997 5_1:-48774524 Msa0734570:CDS
GTTGTATGGTTGCAGCAATA+TGG 0.451787 5_1:+48772430 None:intergenic
TTCTTATAAAGGGGTCTACA+TGG 0.454067 5_1:-48774876 Msa0734570:CDS
GTTCTTCTTGTAGTTAGGTC+CGG 0.455700 5_1:-48775238 Msa0734570:CDS
CAGCAATATGGCTAAAATAT+CGG 0.456068 5_1:+48772442 None:intergenic
AATGCTTGTTTGGGAAATAT+GGG 0.457874 5_1:-48774515 Msa0734570:CDS
AAATTTGGTTGGCAGTCCTT+GGG 0.458152 5_1:+48772521 None:intergenic
TCACATCAAGTTGATGGAAC+AGG 0.460662 5_1:-48775470 Msa0734570:CDS
CAAGCAAGTTTCTTAGAAGA+AGG 0.461101 5_1:+48776494 None:intergenic
AGCTTTCATTTGGACTTTGT+GGG 0.461461 5_1:-48775132 Msa0734570:CDS
CGTTTCATGGCCTGCAATGT+CGG 0.462817 5_1:-48775335 Msa0734570:CDS
GCACAGATCTTTGAGAAGAA+AGG 0.464070 5_1:-48775277 Msa0734570:CDS
TGGCTGCAGCCTTAGAGTGC+TGG 0.470729 5_1:-48776763 Msa0734570:CDS
GCGATAAAGAAGCCCAAAAT+GGG 0.470964 5_1:-48775169 Msa0734570:CDS
GCAGTTGGCATTGCAGCCTG+TGG 0.473332 5_1:-48772560 Msa0734570:CDS
ATTACAATTCTCTTCCTCTC+AGG 0.474889 5_1:-48776391 Msa0734570:intron
GAAGAAAGGCCAAAAGGTGG+TGG 0.475044 5_1:+48776823 None:intergenic
ATTTGTGTGGATGATAATCA+TGG 0.478820 5_1:-48774728 Msa0734570:CDS
AAGAACAAGTTTCATAAACT+TGG 0.480591 5_1:-48776596 Msa0734570:CDS
AAGGTGGTGGGTGGTAGTGT+GGG 0.480677 5_1:+48776836 None:intergenic
TCATTGTATCGGTCGATGAA+TGG 0.480681 5_1:-48774985 Msa0734570:CDS
TTAGAAGAAGGAGGAGACTC+AGG 0.481865 5_1:+48776506 None:intergenic
GGGGAGATTGGAGAAGATAG+TGG 0.483318 5_1:-48775076 Msa0734570:CDS
GTAATTTGGGAGATGGTTAG+TGG 0.485452 5_1:-48772620 Msa0734570:CDS
ACTTCAAAGCATTCTCAACT+CGG 0.485503 5_1:+48775194 None:intergenic
GTCTACATGGGCAAAAGGGT+TGG 0.488203 5_1:-48774863 Msa0734570:CDS
AAAGGTGGTGGGTGGTAGTG+TGG 0.488575 5_1:+48776835 None:intergenic
TCTCCTGTGCAGGCAGCAGT+TGG 0.491474 5_1:-48772575 Msa0734570:CDS
TGGCATGGTAATTTGGGAGA+TGG 0.495831 5_1:-48772627 Msa0734570:CDS
CTTGTTCTTGTTGATGAGCA+TGG 0.498819 5_1:+48776610 None:intergenic
TGGAGTGTGGTAGTGATTTG+AGG 0.504205 5_1:+48776800 None:intergenic
AATCTTACTCAACTCTATCC+TGG 0.504666 5_1:-48776455 Msa0734570:CDS
TGTGTCTTCATCGGGGATAG+TGG 0.507676 5_1:+48776724 None:intergenic
TTATAGGTGGCTTGCTCCTG+AGG 0.507977 5_1:-48774438 Msa0734570:intron
TAAGGATATTGTTAGAATTG+CGG 0.510429 5_1:-48774630 Msa0734570:CDS
CTTCAAAGCATTCTCAACTC+GGG 0.514405 5_1:+48775195 None:intergenic
GCCTGCAATGTCGGTTGCGT+TGG 0.515087 5_1:-48775326 Msa0734570:CDS
TCCAACGCAACCGACATTGC+AGG 0.519201 5_1:+48775325 None:intergenic
AGAAGATAGTGGTAGTGGAA+AGG 0.520028 5_1:-48775065 Msa0734570:CDS
ATGTGTGGTGACTAAGTTCA+TGG 0.520912 5_1:-48774702 Msa0734570:CDS
ATCAAGTTTATGAATGATCA+TGG 0.521097 5_1:-48774590 Msa0734570:CDS
GGAGTGTGGTAGTGATTTGA+GGG 0.521585 5_1:+48776801 None:intergenic
AATACATTATGACAAAATGC+TGG 0.527063 5_1:-48772496 Msa0734570:CDS
ATAGTGGTTGTGGTGCGAGT+TGG 0.530141 5_1:+48776740 None:intergenic
TCAGTTCCAGAAGATCTTTG+TGG 0.532536 5_1:+48774789 None:intergenic
TGTCAGGAAGAGAGTTTCAA+GGG 0.533723 5_1:-48775109 Msa0734570:CDS
TTTCAAGGGGAGAGAATTAG+GGG 0.533893 5_1:-48775095 Msa0734570:CDS
TTGGAATCGAGAAGCTGAAA+GGG 0.535508 5_1:-48774844 Msa0734570:CDS
AGAATTGAGGACGTTTAGAA+GGG 0.537103 5_1:+48772465 None:intergenic
GATGGTGAGGTTCAGGCTCA+AGG 0.537632 5_1:-48775394 Msa0734570:CDS
AGGGGTCTACATGGGCAAAA+GGG 0.542873 5_1:-48774867 Msa0734570:CDS
CAAGAGAGTGGTGGTCATGA+TGG 0.544175 5_1:-48775412 Msa0734570:CDS
TTCATCGGGGATAGTGGTTG+TGG 0.551574 5_1:+48776730 None:intergenic
AACTTCAGGTCTAAGGCCAC+AGG 0.552416 5_1:+48772544 None:intergenic
GTAGTGATTTGAGGGAAGAA+AGG 0.552928 5_1:+48776809 None:intergenic
CAAGAGTGTTGGAGAAGCAA+TGG 0.554989 5_1:-48774477 Msa0734570:CDS
TTGGGAGATGGTTAGTGGTG+AGG 0.559835 5_1:-48772615 Msa0734570:CDS
GCAGTTCTGTGGTATTTGTG+TGG 0.561960 5_1:-48774741 Msa0734570:CDS
GCTAAAATATCGGAGAATTG+AGG 0.562943 5_1:+48772452 None:intergenic
AGGATTCTGTTAGATAGGCA+TGG 0.562984 5_1:-48774539 Msa0734570:CDS
GTGTCAGGAAGAGAGTTTCA+AGG 0.564199 5_1:-48775110 Msa0734570:CDS
GTTTCTCCATTTGTAGCAAG+AGG 0.565295 5_1:-48775300 Msa0734570:CDS
TCTTGTTGAATCAAAATCGC+AGG 0.568291 5_1:+48775430 None:intergenic
TTGAGGGAAGAAAGGCCAAA+AGG 0.569791 5_1:+48776817 None:intergenic
GGATTCTGTTAGATAGGCAT+GGG 0.573192 5_1:-48774538 Msa0734570:CDS
ACAGGCTGAATTTGATATGA+AGG 0.574972 5_1:-48775503 Msa0734570:CDS
GAATGGCAGACGATAAAGTC+GGG 0.578635 5_1:-48774968 Msa0734570:CDS
ATGGTGAGGTTCAGGCTCAA+GGG 0.579331 5_1:-48775393 Msa0734570:CDS
TACAAGAAGAACAACCCCTA+AGG 0.582595 5_1:+48775249 None:intergenic
AGGTGGTGGGTGGTAGTGTG+GGG 0.586813 5_1:+48776837 None:intergenic
GCAAGTTTCTTAGAAGAAGG+AGG 0.589011 5_1:+48776497 None:intergenic
TTTCTCCATTTGTAGCAAGA+GGG 0.591140 5_1:-48775299 Msa0734570:CDS
GAAGAAAGGTTTCACCTTAG+GGG 0.593785 5_1:-48775263 Msa0734570:CDS
TGGACCTAATTCTTATAAAG+GGG 0.597478 5_1:-48774885 Msa0734570:CDS
GTCACTGCCTGCAAGAGTGT+TGG 0.600671 5_1:-48774488 Msa0734570:CDS
AAGAAAGGCCAAAAGGTGGT+GGG 0.604665 5_1:+48776824 None:intergenic
CCTTAGACCTGAAGTTCCCA+AGG 0.606630 5_1:-48772537 Msa0734570:CDS
AAGAAGTAGCTTCTGATCTG+TGG 0.612811 5_1:+48776669 None:intergenic
TTGATTCAACAAGAGAGTGG+TGG 0.613857 5_1:-48775421 Msa0734570:CDS
GTGGTGATGAGATTGAGAAA+TGG 0.615939 5_1:-48774946 Msa0734570:CDS
ACTCCACCTCACATTTCCAA+TGG 0.616203 5_1:-48776783 Msa0734570:exon
CAATGTTTATAGTTATGGCA+TGG 0.619440 5_1:-48772642 Msa0734570:CDS
AGCATGGAAGAGTCTTTGGA+AGG 0.620696 5_1:+48776626 None:intergenic
GTTGGAATCGAGAAGCTGAA+AGG 0.624258 5_1:-48774845 Msa0734570:CDS
TCTTATAAAGGGGTCTACAT+GGG 0.626427 5_1:-48774875 Msa0734570:CDS
AATTGCGGTTGATGTAGCTG+AGG 0.627622 5_1:-48774615 Msa0734570:CDS
ATTGCGGTTGATGTAGCTGA+GGG 0.629504 5_1:-48774614 Msa0734570:CDS
ATGAAAGATGAGGTAGGCAA+AGG 0.629996 5_1:+48775004 None:intergenic
CTTCTGGAACTGATGACTTG+TGG 0.631808 5_1:-48774779 Msa0734570:CDS
AGAAACATTCTGCAGTTCTG+TGG 0.635046 5_1:-48774752 Msa0734570:CDS
GACCGATACAATGAAAGATG+AGG 0.639889 5_1:+48774994 None:intergenic
CAGCCATTGGAAATGTGAGG+TGG 0.647693 5_1:+48776780 None:intergenic
TGAATGGCAGACGATAAAGT+CGG 0.664247 5_1:-48774969 Msa0734570:CDS
AAAGGCCAAAAGGTGGTGGG+TGG 0.666108 5_1:+48776827 None:intergenic
ATGAAACTGATGGTTATAGG+TGG 0.668554 5_1:-48774451 Msa0734570:CDS
GTCAGGAAGAGAGTTTCAAG+GGG 0.668955 5_1:-48775108 Msa0734570:CDS
TTTGTGTGGATGATAATCAT+GGG 0.672227 5_1:-48774727 Msa0734570:CDS
GATACAATGAAAGATGAGGT+AGG 0.673973 5_1:+48774998 None:intergenic
GAATTGAGGACGTTTAGAAG+GGG 0.676264 5_1:+48772466 None:intergenic
GCAATGGAGTATGAAACTGA+TGG 0.679395 5_1:-48774461 Msa0734570:CDS
GTGGTGACTAAGTTCATGGT+AGG 0.687017 5_1:-48774698 Msa0734570:CDS
AGGGAAGAAAGGCCAAAAGG+TGG 0.687156 5_1:+48776820 None:intergenic
ACAGAGATCTTAATACGCAG+AGG 0.689031 5_1:-48774559 Msa0734570:CDS
GAGTGGTGGTCATGATGGTG+AGG 0.691345 5_1:-48775407 Msa0734570:CDS
TGGAAATGTGAGGTGGAGTG+TGG 0.701336 5_1:+48776787 None:intergenic
GTTCAACTGTGTCTTCATCG+GGG 0.707118 5_1:+48776717 None:intergenic
TGATAATCATGGGTTATGTG+TGG 0.712559 5_1:-48774717 Msa0734570:CDS
TGGCAGACGATAAAGTCGGG+TGG 0.713223 5_1:-48774965 Msa0734570:CDS
CTGCAGCCATTGGAAATGTG+AGG 0.729871 5_1:+48776777 None:intergenic
TTGCGGTTGATGTAGCTGAG+GGG 0.764086 5_1:-48774613 Msa0734570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTAACTTGAAAAAAAA+GGG + chr5_1:48774768-48774787 None:intergenic 10.0%
!!! AATTATTAACTTGAAAAAAA+AGG + chr5_1:48774769-48774788 None:intergenic 10.0%
!! AAAAAAAAACTATCTAATAA+AGG - chr5_1:48776155-48776174 Msa0734570:intron 10.0%
!! GATTGTTACTATTATTATTA+AGG + chr5_1:48772639-48772658 None:intergenic 15.0%
!! ATATAATCTAGTATTCAATT+TGG + chr5_1:48772841-48772860 None:intergenic 15.0%
!! TCTATGAAATTACTATAATA+AGG - chr5_1:48773299-48773318 Msa0734570:intron 15.0%
!! TCAATGAAATATGATAAAAT+TGG - chr5_1:48773412-48773431 Msa0734570:intron 15.0%
!! CAATGAAATATGATAAAATT+GGG - chr5_1:48773413-48773432 Msa0734570:intron 15.0%
!!! AATCTTTCTTTGAAATTTAT+TGG + chr5_1:48773469-48773488 None:intergenic 15.0%
!! GTAAATTAATAAGATATGTT+AGG + chr5_1:48775944-48775963 None:intergenic 15.0%
!!! TATTAGATAGTTTTTTTTTC+CGG + chr5_1:48776154-48776173 None:intergenic 15.0%
!!! TAATGTATTTTAAATTTGGT+TGG + chr5_1:48776657-48776676 None:intergenic 15.0%
!!! GTCATAATGTATTTTAAATT+TGG + chr5_1:48776661-48776680 None:intergenic 15.0%
!!! ATAGAGTAAACAATTGTTTT+TGG - chr5_1:48772899-48772918 Msa0734570:intron 20.0%
!! TTGTAATTTCAATACATTGA+TGG - chr5_1:48773340-48773359 Msa0734570:intron 20.0%
!! TGTAATTTCAATACATTGAT+GGG - chr5_1:48773341-48773360 Msa0734570:intron 20.0%
!! CTAAAGAAATAAAGTTTAGA+GGG + chr5_1:48773530-48773549 None:intergenic 20.0%
!! AGCATAACAAAAATAAACTA+AGG - chr5_1:48773553-48773572 Msa0734570:intron 20.0%
!! TTGTATCTAAATCTAAGTAT+AGG - chr5_1:48774994-48775013 Msa0734570:CDS 20.0%
!! TGTATCTAAATCTAAGTATA+GGG - chr5_1:48774995-48775014 Msa0734570:CDS 20.0%
!! ATAAGAAAATTCACATAAGT+TGG + chr5_1:48775647-48775666 None:intergenic 20.0%
!!! AATTACCTATTTTTGTTGTA+TGG + chr5_1:48776751-48776770 None:intergenic 20.0%
!!! CAATTTTCTTTCAACATTTT+TGG + chr5_1:48776798-48776817 None:intergenic 20.0%
! AAGAACAAGTTTCATAAACT+TGG - chr5_1:48772568-48772587 Msa0734570:CDS 25.0%
! ATGCTAGAAATAAGATTATC+AGG + chr5_1:48772745-48772764 None:intergenic 25.0%
! TAGAGATATGAAGAGAAAAA+AGG + chr5_1:48772801-48772820 None:intergenic 25.0%
! TATCTCTAGTGATTATGTAA+AGG - chr5_1:48772813-48772832 Msa0734570:intron 25.0%
!!! CTATAGTTCTTTCTCTTTTT+TGG - chr5_1:48772946-48772965 Msa0734570:intron 25.0%
! TAATAAGGACATGATAAAAG+AGG - chr5_1:48773314-48773333 Msa0734570:intron 25.0%
! GCTAAAGAAATAAAGTTTAG+AGG + chr5_1:48773531-48773550 None:intergenic 25.0%
! ACAAAAATAAACTAAGGTCA+TGG - chr5_1:48773559-48773578 Msa0734570:intron 25.0%
!!! TTTTGTTTATAGTTATGCAC+AGG - chr5_1:48773643-48773662 Msa0734570:intron 25.0%
! ATTGGACCTAATTCTTATAA+AGG - chr5_1:48774277-48774296 Msa0734570:intron 25.0%
! TTGGACCTAATTCTTATAAA+GGG - chr5_1:48774278-48774297 Msa0734570:intron 25.0%
! TAAGGATATTGTTAGAATTG+CGG - chr5_1:48774534-48774553 Msa0734570:CDS 25.0%
! ATCAAGTTTATGAATGATCA+TGG - chr5_1:48774574-48774593 Msa0734570:CDS 25.0%
!!! TGTCATATAAGTGTTGTTTA+AGG - chr5_1:48775090-48775109 Msa0734570:CDS 25.0%
! ACTAAAATACTCGCATTAAT+TGG - chr5_1:48775175-48775194 Msa0734570:CDS 25.0%
! TGGACTGTTTAATTAAACAA+AGG - chr5_1:48775229-48775248 Msa0734570:CDS 25.0%
!! AGTGTTAATAAGTATTGTCT+TGG - chr5_1:48775263-48775282 Msa0734570:CDS 25.0%
!! CTTTTAATCAGTGAGAATAA+GGG + chr5_1:48775378-48775397 None:intergenic 25.0%
! AGATCAAATTCTATCAAACA+TGG - chr5_1:48775406-48775425 Msa0734570:CDS 25.0%
! GATCAAATTCTATCAAACAT+GGG - chr5_1:48775407-48775426 Msa0734570:CDS 25.0%
! ATCAAATTCTATCAAACATG+GGG - chr5_1:48775408-48775427 Msa0734570:CDS 25.0%
!! AAAATTCCAGTATAGTGTTT+TGG - chr5_1:48775720-48775739 Msa0734570:intron 25.0%
!!! ATCTCTTTTTTATGCTCTTA+TGG - chr5_1:48775750-48775769 Msa0734570:intron 25.0%
! TGTATAAAAATATACACGAG+TGG + chr5_1:48776017-48776036 None:intergenic 25.0%
!! TACCAGAATTAATTTGAGAA+TGG - chr5_1:48776064-48776083 Msa0734570:intron 25.0%
! CCAAAAACTATATGGTTATT+TGG + chr5_1:48776245-48776264 None:intergenic 25.0%
!! CCAAATAACCATATAGTTTT+TGG - chr5_1:48776242-48776261 Msa0734570:intron 25.0%
! ATGAGCAATGTTTATAGTTA+TGG - chr5_1:48776517-48776536 Msa0734570:CDS 25.0%
! AATACATTATGACAAAATGC+TGG - chr5_1:48776668-48776687 Msa0734570:CDS 25.0%
! TTCTTCTAAGAAACTTGCTT+GGG - chr5_1:48772672-48772691 Msa0734570:CDS 30.0%
TAGAATCAAGTTCAATTCCT+AGG + chr5_1:48773045-48773064 None:intergenic 30.0%
! TCCTTAGGTAATTTAGTCTT+CGG - chr5_1:48773219-48773238 Msa0734570:intron 30.0%
!! AATACATTGATGGGTTATAG+TGG - chr5_1:48773350-48773369 Msa0734570:intron 30.0%
!!! ATTTTGATTCAACAAGAGAG+TGG - chr5_1:48773740-48773759 Msa0734570:intron 30.0%
! TTTGACCAATTTTTCATGAC+CGG + chr5_1:48773948-48773967 None:intergenic 30.0%
TACCTCATCTTTCATTGTAT+CGG - chr5_1:48774168-48774187 Msa0734570:intron 30.0%
TGGACCTAATTCTTATAAAG+GGG - chr5_1:48774279-48774298 Msa0734570:intron 30.0%
TAGACCCCTTTATAAGAATT+AGG + chr5_1:48774286-48774305 None:intergenic 30.0%
ATTTGTGTGGATGATAATCA+TGG - chr5_1:48774436-48774455 Msa0734570:intron 30.0%
TTTGTGTGGATGATAATCAT+GGG - chr5_1:48774437-48774456 Msa0734570:intron 30.0%
AATGCTTGTTTGGGAAATAT+GGG - chr5_1:48774649-48774668 Msa0734570:CDS 30.0%
AGTATGAAACTGATGGTTAT+AGG - chr5_1:48774710-48774729 Msa0734570:CDS 30.0%
AAAGGCAATTATGTATAGCT+AGG + chr5_1:48774830-48774849 None:intergenic 30.0%
GTATCAGATACAGTATGTAT+CGG - chr5_1:48774890-48774909 Msa0734570:CDS 30.0%
TACTAATTCTCTTATGCTCA+TGG - chr5_1:48775026-48775045 Msa0734570:CDS 30.0%
! GCTTTTAATCAGTGAGAATA+AGG + chr5_1:48775379-48775398 None:intergenic 30.0%
! ATTTTTCCTTGAACACATGT+GGG + chr5_1:48775565-48775584 None:intergenic 30.0%
! AATTTTTCCTTGAACACATG+TGG + chr5_1:48775566-48775585 None:intergenic 30.0%
!!! TTCTTGCAGATTTCCTTTTT+TGG - chr5_1:48775595-48775614 Msa0734570:intron 30.0%
GAAGAAGAAAACACCAAAAA+AGG + chr5_1:48775611-48775630 None:intergenic 30.0%
!!! ATGTCATTTTCATGTTGTAC+TGG + chr5_1:48775777-48775796 None:intergenic 30.0%
TGGTATGCATGCATTATAAA+GGG + chr5_1:48775979-48775998 None:intergenic 30.0%
ATGGTATGCATGCATTATAA+AGG + chr5_1:48775980-48775999 None:intergenic 30.0%
AGTGGTTAGTGGTTAAATAA+TGG + chr5_1:48775999-48776018 None:intergenic 30.0%
CTCCATTCTCAAATTAATTC+TGG + chr5_1:48776069-48776088 None:intergenic 30.0%
CACAACAACCAAAAACTATA+TGG + chr5_1:48776253-48776272 None:intergenic 30.0%
GTTGTTGTGCATAAATAAGT+TGG - chr5_1:48776264-48776283 Msa0734570:intron 30.0%
! TATGTAAGGACATTTTCTCT+TGG + chr5_1:48776315-48776334 None:intergenic 30.0%
ATTAAGCTGTTTATCCAAAC+AGG - chr5_1:48776402-48776421 Msa0734570:CDS 30.0%
! TTTGTCTTCTCTTCCTTTTT+GGG - chr5_1:48776445-48776464 Msa0734570:CDS 30.0%
! TATCTGTTTTCAACCCAAAA+AGG + chr5_1:48776461-48776480 None:intergenic 30.0%
CAATGTTTATAGTTATGGCA+TGG - chr5_1:48776522-48776541 Msa0734570:CDS 30.0%
ATAGTTATGGCATGGTAATT+TGG - chr5_1:48776530-48776549 Msa0734570:CDS 30.0%
TAGTTATGGCATGGTAATTT+GGG - chr5_1:48776531-48776550 Msa0734570:CDS 30.0%
CAGCAATATGGCTAAAATAT+CGG + chr5_1:48776725-48776744 None:intergenic 30.0%
TGCAACCATACAACAAAAAT+AGG - chr5_1:48776743-48776762 Msa0734570:CDS 30.0%
!!! CAACATTTTTGGTTCATCAA+AGG + chr5_1:48776787-48776806 None:intergenic 30.0%
TTGTTCAACTGTGTCTTCAT+CGG + chr5_1:48772452-48772471 None:intergenic 35.0%
CAAGCAAGTTTCTTAGAAGA+AGG + chr5_1:48772673-48772692 None:intergenic 35.0%
! CTTCTTCTAAGAAACTTGCT+TGG - chr5_1:48772671-48772690 Msa0734570:CDS 35.0%
AATCTTACTCAACTCTATCC+TGG - chr5_1:48772709-48772728 Msa0734570:intron 35.0%
ATTACAATTCTCTTCCTCTC+AGG - chr5_1:48772773-48772792 Msa0734570:intron 35.0%
GCAAGACTATATCTATCTTC+TGG + chr5_1:48773008-48773027 None:intergenic 35.0%
! TGCAAAAAGTTGTTTCACCT+AGG - chr5_1:48773025-48773044 Msa0734570:intron 35.0%
CTATTGAAAGATTCGTCCTT+AGG - chr5_1:48773062-48773081 Msa0734570:intron 35.0%
TGGTTAATGAGTTTCACCTA+AGG + chr5_1:48773081-48773100 None:intergenic 35.0%
TCGCTAAAGAAAGACACATT+CGG + chr5_1:48773177-48773196 None:intergenic 35.0%
TCTCAAATGTGTCTTTCCTT+AGG - chr5_1:48773204-48773223 Msa0734570:intron 35.0%
TCCGAAGACTAAATTACCTA+AGG + chr5_1:48773223-48773242 None:intergenic 35.0%
! TCATAGACTATACCGACTAA+CGG + chr5_1:48773286-48773305 None:intergenic 35.0%
ACAGGCTGAATTTGATATGA+AGG - chr5_1:48773661-48773680 Msa0734570:intron 35.0%
!! GTTTCTTCACATCAAGTTGA+TGG - chr5_1:48773688-48773707 Msa0734570:intron 35.0%
TCTTGTTGAATCAAAATCGC+AGG + chr5_1:48773737-48773756 None:intergenic 35.0%
TTTCTCCATTTGTAGCAAGA+GGG - chr5_1:48773865-48773884 Msa0734570:intron 35.0%
AGAAGAAAGGTTTCACCTTA+GGG - chr5_1:48773900-48773919 Msa0734570:intron 35.0%
! ACTTCAAAGCATTCTCAACT+CGG + chr5_1:48773973-48773992 None:intergenic 35.0%
! ACATTCACAGAACCCATTTT+GGG + chr5_1:48774010-48774029 None:intergenic 35.0%
GTGAATGTGAAGCTTTCATT+TGG - chr5_1:48774022-48774041 Msa0734570:intron 35.0%
AAGCTTTCATTTGGACTTTG+TGG - chr5_1:48774031-48774050 Msa0734570:intron 35.0%
AGCTTTCATTTGGACTTTGT+GGG - chr5_1:48774032-48774051 Msa0734570:intron 35.0%
GATACAATGAAAGATGAGGT+AGG + chr5_1:48774169-48774188 None:intergenic 35.0%
GTTGAGTTTACAGAACAGAT+TGG - chr5_1:48774259-48774278 Msa0734570:intron 35.0%
TTCTTATAAAGGGGTCTACA+TGG - chr5_1:48774288-48774307 Msa0734570:intron 35.0%
TCTTATAAAGGGGTCTACAT+GGG - chr5_1:48774289-48774308 Msa0734570:intron 35.0%
! AGAACTGCAGAATGTTTCTA+TGG + chr5_1:48774411-48774430 None:intergenic 35.0%
! TGATAATCATGGGTTATGTG+TGG - chr5_1:48774447-48774466 Msa0734570:CDS 35.0%
GAATGCTTGTTTGGGAAATA+TGG - chr5_1:48774648-48774667 Msa0734570:CDS 35.0%
ATGAAACTGATGGTTATAGG+TGG - chr5_1:48774713-48774732 Msa0734570:CDS 35.0%
AATGAATAGAAGCAAACCTC+AGG + chr5_1:48774745-48774764 None:intergenic 35.0%
CATCACAGTCTATGTGTTAA+AGG + chr5_1:48774848-48774867 None:intergenic 35.0%
GATACAGTATGTATCGGATA+CGG - chr5_1:48774896-48774915 Msa0734570:CDS 35.0%
CACGTCAAATCATTATTCGA+TGG + chr5_1:48774935-48774954 None:intergenic 35.0%
CATTATGAGTCAATCTTTGC+AGG + chr5_1:48774972-48774991 None:intergenic 35.0%
TGACACTTGTAATGAGACAA+AGG - chr5_1:48775332-48775351 Msa0734570:CDS 35.0%
TAAAGATCTGAACTTCCTTG+AGG + chr5_1:48775479-48775498 None:intergenic 35.0%
! TTTTATCCCACATGTGTTCA+AGG - chr5_1:48775556-48775575 Msa0734570:intron 35.0%
TGAACTAGCTAGTGTATACA+AGG + chr5_1:48775696-48775715 None:intergenic 35.0%
ATAGAGCCAAAACACTATAC+TGG + chr5_1:48775729-48775748 None:intergenic 35.0%
AAATATACACGAGTGGTTAG+TGG + chr5_1:48776010-48776029 None:intergenic 35.0%
TGCGAAAAAGACCATATCAA+AGG + chr5_1:48776107-48776126 None:intergenic 35.0%
GTGTGTTTGTGTGATATGTA+AGG + chr5_1:48776329-48776348 None:intergenic 35.0%
ACACCAATTCACATGAATGT+TGG - chr5_1:48776345-48776364 Msa0734570:intron 35.0%
TCACCAACATTCATGTGAAT+TGG + chr5_1:48776351-48776370 None:intergenic 35.0%
! CTTTGTCTTCTCTTCCTTTT+TGG - chr5_1:48776444-48776463 Msa0734570:CDS 35.0%
GGTTGAAAACAGATAATTGC+AGG - chr5_1:48776466-48776485 Msa0734570:CDS 35.0%
AGAATTGAGGACGTTTAGAA+GGG + chr5_1:48776702-48776721 None:intergenic 35.0%
GCTAAAATATCGGAGAATTG+AGG + chr5_1:48776715-48776734 None:intergenic 35.0%
GTAGTGATTTGAGGGAAGAA+AGG + chr5_1:48772358-48772377 None:intergenic 40.0%
TGTTCAACTGTGTCTTCATC+GGG + chr5_1:48772451-48772470 None:intergenic 40.0%
! ATCTGTGGTGAGTTTTCATG+AGG + chr5_1:48772483-48772502 None:intergenic 40.0%
AAGAAGTAGCTTCTGATCTG+TGG + chr5_1:48772498-48772517 None:intergenic 40.0%
! CTTGTTCTTGTTGATGAGCA+TGG + chr5_1:48772557-48772576 None:intergenic 40.0%
GCAAGTTTCTTAGAAGAAGG+AGG + chr5_1:48772670-48772689 None:intergenic 40.0%
!! AGAGAAAAAAGGTACCTGAG+AGG + chr5_1:48772790-48772809 None:intergenic 40.0%
! CACTCTGAGCTCTAATAATC+CGG - chr5_1:48772975-48772994 Msa0734570:intron 40.0%
! AGCTCTAATAATCCGGAGTT+TGG - chr5_1:48772982-48773001 Msa0734570:intron 40.0%
ACCACATGAGTTCATTCACT+TGG - chr5_1:48773097-48773116 Msa0734570:intron 40.0%
ACCAAGTGAATGAACTCATG+TGG + chr5_1:48773101-48773120 None:intergenic 40.0%
CGAATGTTTCTTCCGTTAGT+CGG - chr5_1:48773271-48773290 Msa0734570:intron 40.0%
!! TCACATCAAGTTGATGGAAC+AGG - chr5_1:48773694-48773713 Msa0734570:intron 40.0%
TTGATTCAACAAGAGAGTGG+TGG - chr5_1:48773743-48773762 Msa0734570:intron 40.0%
GTTTCTCCATTTGTAGCAAG+AGG - chr5_1:48773864-48773883 Msa0734570:intron 40.0%
! GCACAGATCTTTGAGAAGAA+AGG - chr5_1:48773887-48773906 Msa0734570:intron 40.0%
GAGAAGAAAGGTTTCACCTT+AGG - chr5_1:48773899-48773918 Msa0734570:intron 40.0%
GAAGAAAGGTTTCACCTTAG+GGG - chr5_1:48773901-48773920 Msa0734570:intron 40.0%
TACAAGAAGAACAACCCCTA+AGG + chr5_1:48773918-48773937 None:intergenic 40.0%
GGGTTGTTCTTCTTGTAGTT+AGG - chr5_1:48773921-48773940 Msa0734570:intron 40.0%
GTTCTTCTTGTAGTTAGGTC+CGG - chr5_1:48773926-48773945 Msa0734570:intron 40.0%
TAGGTCCGGTCATGAAAAAT+TGG - chr5_1:48773940-48773959 Msa0734570:intron 40.0%
! CTTCAAAGCATTCTCAACTC+GGG + chr5_1:48773972-48773991 None:intergenic 40.0%
TGCGATAAAGAAGCCCAAAA+TGG - chr5_1:48773994-48774013 Msa0734570:intron 40.0%
GCGATAAAGAAGCCCAAAAT+GGG - chr5_1:48773995-48774014 Msa0734570:intron 40.0%
! CACATTCACAGAACCCATTT+TGG + chr5_1:48774011-48774030 None:intergenic 40.0%
TGTCAGGAAGAGAGTTTCAA+GGG - chr5_1:48774055-48774074 Msa0734570:intron 40.0%
AGTTTCAAGGGGAGAGAATT+AGG - chr5_1:48774067-48774086 Msa0734570:intron 40.0%
GTTTCAAGGGGAGAGAATTA+GGG - chr5_1:48774068-48774087 Msa0734570:intron 40.0%
TTTCAAGGGGAGAGAATTAG+GGG - chr5_1:48774069-48774088 Msa0734570:intron 40.0%
! ATTGGAGAAGATAGTGGTAG+TGG - chr5_1:48774094-48774113 Msa0734570:intron 40.0%
!! AGAAGATAGTGGTAGTGGAA+AGG - chr5_1:48774099-48774118 Msa0734570:intron 40.0%
ATGAAAGATGAGGTAGGCAA+AGG + chr5_1:48774163-48774182 None:intergenic 40.0%
GACCGATACAATGAAAGATG+AGG + chr5_1:48774173-48774192 None:intergenic 40.0%
! TCATTGTATCGGTCGATGAA+TGG - chr5_1:48774179-48774198 Msa0734570:intron 40.0%
TGAATGGCAGACGATAAAGT+CGG - chr5_1:48774195-48774214 Msa0734570:intron 40.0%
! GTGGTGATGAGATTGAGAAA+TGG - chr5_1:48774218-48774237 Msa0734570:intron 40.0%
TTGGAATCGAGAAGCTGAAA+GGG - chr5_1:48774320-48774339 Msa0734570:intron 40.0%
! AAGCTGAAAGGGTGTGAAAA+AGG - chr5_1:48774331-48774350 Msa0734570:intron 40.0%
TCAGTTCCAGAAGATCTTTG+TGG + chr5_1:48774378-48774397 None:intergenic 40.0%
AGAAACATTCTGCAGTTCTG+TGG - chr5_1:48774412-48774431 Msa0734570:intron 40.0%
ATGTGTGGTGACTAAGTTCA+TGG - chr5_1:48774462-48774481 Msa0734570:CDS 40.0%
GAACAAGAAGCTTCAGAGTA+AGG - chr5_1:48774516-48774535 Msa0734570:CDS 40.0%
ACAGAGATCTTAATACGCAG+AGG - chr5_1:48774605-48774624 Msa0734570:CDS 40.0%
AGGATTCTGTTAGATAGGCA+TGG - chr5_1:48774625-48774644 Msa0734570:CDS 40.0%
GGATTCTGTTAGATAGGCAT+GGG - chr5_1:48774626-48774645 Msa0734570:CDS 40.0%
GCAATGGAGTATGAAACTGA+TGG - chr5_1:48774703-48774722 Msa0734570:CDS 40.0%
AAAGTAGCAGTTGTGAAGTG+AGG - chr5_1:48775206-48775225 Msa0734570:CDS 40.0%
CTTGTAATGAGACAAAGGAG+CGG - chr5_1:48775337-48775356 Msa0734570:CDS 40.0%
ATGACATGCTTGTAGTTGAG+CGG - chr5_1:48775790-48775809 Msa0734570:intron 40.0%
CATGCTCAAACAATGATGTC+AGG + chr5_1:48775921-48775940 None:intergenic 40.0%
TATCAAAGGCTTGAGACATG+CGG + chr5_1:48776093-48776112 None:intergenic 40.0%
CATGTCTCAAGCCTTTGATA+TGG - chr5_1:48776093-48776112 Msa0734570:intron 40.0%
ATAGTTATTTGTGCGCAGAC+CGG - chr5_1:48776132-48776151 Msa0734570:intron 40.0%
CAAAGAGTTAGCACGAACTA+GGG + chr5_1:48776429-48776448 None:intergenic 40.0%
ACAAAGAGTTAGCACGAACT+AGG + chr5_1:48776430-48776449 None:intergenic 40.0%
GTAATTTGGGAGATGGTTAG+TGG - chr5_1:48776544-48776563 Msa0734570:CDS 40.0%
AAATTTGGTTGGCAGTCCTT+GGG + chr5_1:48776646-48776665 None:intergenic 40.0%
TAAATTTGGTTGGCAGTCCT+TGG + chr5_1:48776647-48776666 None:intergenic 40.0%
GAATTGAGGACGTTTAGAAG+GGG + chr5_1:48776701-48776720 None:intergenic 40.0%
GAGAATTGAGGACGTTTAGA+AGG + chr5_1:48776703-48776722 None:intergenic 40.0%
GTTGTATGGTTGCAGCAATA+TGG + chr5_1:48776737-48776756 None:intergenic 40.0%
AAGAAAGGCCAAAAGGTGGT+GGG + chr5_1:48772343-48772362 None:intergenic 45.0%
TTGAGGGAAGAAAGGCCAAA+AGG + chr5_1:48772350-48772369 None:intergenic 45.0%
! GGAGTGTGGTAGTGATTTGA+GGG + chr5_1:48772366-48772385 None:intergenic 45.0%
! TGGAGTGTGGTAGTGATTTG+AGG + chr5_1:48772367-48772386 None:intergenic 45.0%
ACTCCACCTCACATTTCCAA+TGG - chr5_1:48772381-48772400 Msa0734570:three_prime_UTR 45.0%
GTTCAACTGTGTCTTCATCG+GGG + chr5_1:48772450-48772469 None:intergenic 45.0%
AGCATGGAAGAGTCTTTGGA+AGG + chr5_1:48772541-48772560 None:intergenic 45.0%
GATGAGCATGGAAGAGTCTT+TGG + chr5_1:48772545-48772564 None:intergenic 45.0%
TTAGAAGAAGGAGGAGACTC+AGG + chr5_1:48772661-48772680 None:intergenic 45.0%
TTATCAGGAAGCTGAGTTCC+AGG + chr5_1:48772730-48772749 None:intergenic 45.0%
TCTATCTTCTGGCCAAACTC+CGG + chr5_1:48772997-48773016 None:intergenic 45.0%
!! CAAGTTGATGGAACAGGCAT+TGG - chr5_1:48773700-48773719 Msa0734570:intron 45.0%
ATTTGGACTTTGTGGGTGTC+AGG - chr5_1:48774039-48774058 Msa0734570:intron 45.0%
GTGTCAGGAAGAGAGTTTCA+AGG - chr5_1:48774054-48774073 Msa0734570:intron 45.0%
GTCAGGAAGAGAGTTTCAAG+GGG - chr5_1:48774056-48774075 Msa0734570:intron 45.0%
!! GCGTCTGAAGCTGAATCTTT+TGG + chr5_1:48774141-48774160 None:intergenic 45.0%
GAATGGCAGACGATAAAGTC+GGG - chr5_1:48774196-48774215 Msa0734570:intron 45.0%
GTTGGAATCGAGAAGCTGAA+AGG - chr5_1:48774319-48774338 Msa0734570:intron 45.0%
TGAGCTCCACAAAGATCTTC+TGG - chr5_1:48774369-48774388 Msa0734570:intron 45.0%
!! CTTCTGGAACTGATGACTTG+TGG - chr5_1:48774385-48774404 Msa0734570:intron 45.0%
GCAGTTCTGTGGTATTTGTG+TGG - chr5_1:48774423-48774442 Msa0734570:intron 45.0%
GTGGTGACTAAGTTCATGGT+AGG - chr5_1:48774466-48774485 Msa0734570:CDS 45.0%
! AATTGCGGTTGATGTAGCTG+AGG - chr5_1:48774549-48774568 Msa0734570:CDS 45.0%
! ATTGCGGTTGATGTAGCTGA+GGG - chr5_1:48774550-48774569 Msa0734570:CDS 45.0%
CGCAGAGGATTCTGTTAGAT+AGG - chr5_1:48774620-48774639 Msa0734570:CDS 45.0%
TAGGCATGGGAATGCTTGTT+TGG - chr5_1:48774639-48774658 Msa0734570:CDS 45.0%
AGGCATGGGAATGCTTGTTT+GGG - chr5_1:48774640-48774659 Msa0734570:CDS 45.0%
!! CAAGAGTGTTGGAGAAGCAA+TGG - chr5_1:48774687-48774706 Msa0734570:CDS 45.0%
ATCAAAGGCTTGAGACATGC+GGG + chr5_1:48776092-48776111 None:intergenic 45.0%
ATGTCTCTGTCACGCTTTCA+GGG + chr5_1:48776495-48776514 None:intergenic 45.0%
TGGCATGGTAATTTGGGAGA+TGG - chr5_1:48776537-48776556 Msa0734570:CDS 45.0%
GAAGAAAGGCCAAAAGGTGG+TGG + chr5_1:48772344-48772363 None:intergenic 50.0%
AGGGAAGAAAGGCCAAAAGG+TGG + chr5_1:48772347-48772366 None:intergenic 50.0%
TGGAAATGTGAGGTGGAGTG+TGG + chr5_1:48772380-48772399 None:intergenic 50.0%
CAGCCATTGGAAATGTGAGG+TGG + chr5_1:48772387-48772406 None:intergenic 50.0%
CTGCAGCCATTGGAAATGTG+AGG + chr5_1:48772390-48772409 None:intergenic 50.0%
ATAGTGGTTGTGGTGCGAGT+TGG + chr5_1:48772427-48772446 None:intergenic 50.0%
! TTCATCGGGGATAGTGGTTG+TGG + chr5_1:48772437-48772456 None:intergenic 50.0%
TGTGTCTTCATCGGGGATAG+TGG + chr5_1:48772443-48772462 None:intergenic 50.0%
CAAGAGAGTGGTGGTCATGA+TGG - chr5_1:48773752-48773771 Msa0734570:intron 50.0%
! TGGTCATGATGGTGAGGTTC+AGG - chr5_1:48773763-48773782 Msa0734570:intron 50.0%
ATGGTGAGGTTCAGGCTCAA+GGG - chr5_1:48773771-48773790 Msa0734570:intron 50.0%
CGTTTCATGGCCTGCAATGT+CGG - chr5_1:48773829-48773848 Msa0734570:intron 50.0%
CTGTGCCCTCTTGCTACAAA+TGG + chr5_1:48773873-48773892 None:intergenic 50.0%
GGGAGAGAATTAGGGGAGAT+TGG - chr5_1:48774076-48774095 Msa0734570:intron 50.0%
GGGGAGATTGGAGAAGATAG+TGG - chr5_1:48774088-48774107 Msa0734570:intron 50.0%
AAGGGGTCTACATGGGCAAA+AGG - chr5_1:48774296-48774315 Msa0734570:intron 50.0%
AGGGGTCTACATGGGCAAAA+GGG - chr5_1:48774297-48774316 Msa0734570:intron 50.0%
GTCTACATGGGCAAAAGGGT+TGG - chr5_1:48774301-48774320 Msa0734570:intron 50.0%
! TTGCGGTTGATGTAGCTGAG+GGG - chr5_1:48774551-48774570 Msa0734570:CDS 50.0%
TGCTTCTCCAACACTCTTGC+AGG + chr5_1:48774686-48774705 None:intergenic 50.0%
!! TTATAGGTGGCTTGCTCCTG+AGG - chr5_1:48774726-48774745 Msa0734570:CDS 50.0%
GAGTCAATCTTTGCAGGCAG+TGG + chr5_1:48774966-48774985 None:intergenic 50.0%
GTAGCAGTTGTGAAGTGAGG+TGG - chr5_1:48775209-48775228 Msa0734570:CDS 50.0%
CCTTGAGGAGAACGCTAAGT+TGG + chr5_1:48775464-48775483 None:intergenic 50.0%
CCAACTTAGCGTTCTCCTCA+AGG - chr5_1:48775461-48775480 Msa0734570:CDS 50.0%
GATGTCTCTGTCACGCTTTC+AGG + chr5_1:48776496-48776515 None:intergenic 50.0%
TTGGGAGATGGTTAGTGGTG+AGG - chr5_1:48776549-48776568 Msa0734570:CDS 50.0%
TTCTGCACTTTCTCCTGTGC+AGG - chr5_1:48776579-48776598 Msa0734570:CDS 50.0%
! AACTTCAGGTCTAAGGCCAC+AGG + chr5_1:48776623-48776642 None:intergenic 50.0%
CCTTGGGAACTTCAGGTCTA+AGG + chr5_1:48776630-48776649 None:intergenic 50.0%
CCTTAGACCTGAAGTTCCCA+AGG - chr5_1:48776627-48776646 Msa0734570:CDS 50.0%
!! AAGGTGGTGGGTGGTAGTGT+GGG + chr5_1:48772331-48772350 None:intergenic 55.0%
!! AAAGGTGGTGGGTGGTAGTG+TGG + chr5_1:48772332-48772351 None:intergenic 55.0%
! CACTACCACCCACCACCTTT+TGG - chr5_1:48772332-48772351 Msa0734570:three_prime_UTR 55.0%
!! AAAGGCCAAAAGGTGGTGGG+TGG + chr5_1:48772340-48772359 None:intergenic 55.0%
!! CACTCTAAGGCTGCAGCCAT+TGG + chr5_1:48772400-48772419 None:intergenic 55.0%
! GAGTGGTGGTCATGATGGTG+AGG - chr5_1:48773757-48773776 Msa0734570:intron 55.0%
GATGGTGAGGTTCAGGCTCA+AGG - chr5_1:48773770-48773789 Msa0734570:intron 55.0%
CTTGCAACGCGCTCGTTTCA+TGG - chr5_1:48773816-48773835 Msa0734570:intron 55.0%
TCCAACGCAACCGACATTGC+AGG + chr5_1:48773842-48773861 None:intergenic 55.0%
TGGCAGACGATAAAGTCGGG+TGG - chr5_1:48774199-48774218 Msa0734570:intron 55.0%
! GTCACTGCCTGCAAGAGTGT+TGG - chr5_1:48774676-48774695 Msa0734570:CDS 55.0%
GCACGAACTAGGGTCCTGTT+TGG + chr5_1:48776419-48776438 None:intergenic 55.0%
TGGCAGTCCTTGGGAACTTC+AGG + chr5_1:48776637-48776656 None:intergenic 55.0%
!! AGGTGGTGGGTGGTAGTGTG+GGG + chr5_1:48772330-48772349 None:intergenic 60.0%
TGGCTGCAGCCTTAGAGTGC+TGG - chr5_1:48772401-48772420 Msa0734570:exon 60.0%
! GCGAGTTGGCCAGCACTCTA+AGG + chr5_1:48772413-48772432 None:intergenic 60.0%
! GCCTGCAATGTCGGTTGCGT+TGG - chr5_1:48773838-48773857 Msa0734570:intron 60.0%
TCTCCTGTGCAGGCAGCAGT+TGG - chr5_1:48776589-48776608 Msa0734570:CDS 60.0%
ATGCCAACTGCTGCCTGCAC+AGG + chr5_1:48776595-48776614 None:intergenic 60.0%
GCAGTTGGCATTGCAGCCTG+TGG - chr5_1:48776604-48776623 Msa0734570:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 48772302 48776884 48772302 ID=Msa0734570;Name=Msa0734570
chr5_1 mRNA 48772302 48776884 48772302 ID=Msa0734570-mRNA-1;Parent=Msa0734570;Name=Msa0734570-mRNA-1;_AED=0.08;_eAED=0.08;_QI=98|1|1|1|1|1|3|116|592
chr5_1 exon 48772302 48772708 48772302 ID=Msa0734570-mRNA-1:exon:13916;Parent=Msa0734570-mRNA-1
chr5_1 exon 48774439 48775531 48774439 ID=Msa0734570-mRNA-1:exon:13915;Parent=Msa0734570-mRNA-1
chr5_1 exon 48776392 48776884 48776392 ID=Msa0734570-mRNA-1:exon:13914;Parent=Msa0734570-mRNA-1
chr5_1 five_prime_UTR 48776787 48776884 48776787 ID=Msa0734570-mRNA-1:five_prime_utr;Parent=Msa0734570-mRNA-1
chr5_1 CDS 48776392 48776786 48776392 ID=Msa0734570-mRNA-1:cds;Parent=Msa0734570-mRNA-1
chr5_1 CDS 48774439 48775531 48774439 ID=Msa0734570-mRNA-1:cds;Parent=Msa0734570-mRNA-1
chr5_1 CDS 48772418 48772708 48772418 ID=Msa0734570-mRNA-1:cds;Parent=Msa0734570-mRNA-1
chr5_1 three_prime_UTR 48772302 48772417 48772302 ID=Msa0734570-mRNA-1:three_prime_utr;Parent=Msa0734570-mRNA-1
Gene Sequence

>Msa0734570

ATGGCTGCAGCCTTAGAGTGCTGGCCAACTCGCACCACAACCACTATCCCCGATGAAGACACAGTTGAACAACAACAAGTCCTCATGAAAACTCACCACAGATCAGAAGCTACTTCTTCTTCTTCTTCTCTTTCTCTTCCTTCCAAAGACTCTTCCATGCTCATCAACAAGAACAAGTTTCATAAACTTGGTCGTAATCTTTCTGATGCAATCACATCTTTCAAAAACACACTCAACCTTAATAATAATAGTAACAATCCTGAGTCTCCTCCTTCTTCTAAGAAACTTGCTTGGGCTTCTGTTCTTCGTAATCTTACTCAACTCTATCCTGGAACTCAGCTTCCTGATAATCTTATTTCTAGCATTCGTAATCATTACAATTCTCTTCCTCTCAGTTATGCACAGGCTGAATTTGATATGAAGGATGTGTTTCTTCACATCAAGTTGATGGAACAGGCATTGGAGAGTGATCAGCCTGCGATTTTGATTCAACAAGAGAGTGGTGGTCATGATGGTGAGGTTCAGGCTCAAGGGTCTGTTTTGAAGCTCAATTTTGCTTGCAACGCGCTCGTTTCATGGCCTGCAATGTCGGTTGCGTTGGATAGTTTCTCCATTTGTAGCAAGAGGGCACAGATCTTTGAGAAGAAAGGTTTCACCTTAGGGGTTGTTCTTCTTGTAGTTAGGTCCGGTCATGAAAAATTGGTCAAAACCCGAGTTGAGAATGCTTTGAAGTTTGCGATAAAGAAGCCCAAAATGGGTTCTGTGAATGTGAAGCTTTCATTTGGACTTTGTGGGTGTCAGGAAGAGAGTTTCAAGGGGAGAGAATTAGGGGAGATTGGAGAAGATAGTGGTAGTGGAAAGGAGTTTGAGAATTCTAGCCAAAAGATTCAGCTTCAGACGCCTTTGCCTACCTCATCTTTCATTGTATCGGTCGATGAATGGCAGACGATAAAGTCGGGTGGTGATGAGATTGAGAAATGGTTATTGAATGCTGATTATGTTGAGTTTACAGAACAGATTGGACCTAATTCTTATAAAGGGGTCTACATGGGCAAAAGGGTTGGAATCGAGAAGCTGAAAGGGTGTGAAAAAGGAAATGCTTACGAGTTTGAGCTCCACAAAGATCTTCTGGAACTGATGACTTGTGGCCATAGAAACATTCTGCAGTTCTGTGGTATTTGTGTGGATGATAATCATGGGTTATGTGTGGTGACTAAGTTCATGGTAGGTAGATCTGTACACGACTTAATGTTAAAGAACAAGAAGCTTCAGAGTAAGGATATTGTTAGAATTGCGGTTGATGTAGCTGAGGGGATCAAGTTTATGAATGATCATGGTGTTGCATACAGAGATCTTAATACGCAGAGGATTCTGTTAGATAGGCATGGGAATGCTTGTTTGGGAAATATGGGTGTTGTCACTGCCTGCAAGAGTGTTGGAGAAGCAATGGAGTATGAAACTGATGGTTATAGGTGGCTTGCTCCTGAGATAATTGCAGGAGACCCTGAAAGCGTGACAGAGACATCGATGAGCAATGTTTATAGTTATGGCATGGTAATTTGGGAGATGGTTAGTGGTGAGGCAGCATATTCTGCACTTTCTCCTGTGCAGGCAGCAGTTGGCATTGCAGCCTGTGGCCTTAGACCTGAAGTTCCCAAGGACTGCCAACCAAATTTAAAATACATTATGACAAAATGCTGGAACAATACCCCTTCTAAACGTCCTCAATTCTCCGATATTTTAGCCATATTGCTGCAACCATACAACAAAAATAGGTAA
Protein sequence

>Msa0734570

MAAALECWPTRTTTTIPDEDTVEQQQVLMKTHHRSEATSSSSSLSLPSKDSSMLINKNKFHKLGRNLSDAITSFKNTLNLNNNSNNPESPPSSKKLAWASVLRNLTQLYPGTQLPDNLISSIRNHYNSLPLSYAQAEFDMKDVFLHIKLMEQALESDQPAILIQQESGGHDGEVQAQGSVLKLNFACNALVSWPAMSVALDSFSICSKRAQIFEKKGFTLGVVLLVVRSGHEKLVKTRVENALKFAIKKPKMGSVNVKLSFGLCGCQEESFKGRELGEIGEDSGSGKEFENSSQKIQLQTPLPTSSFIVSVDEWQTIKSGGDEIEKWLLNADYVEFTEQIGPNSYKGVYMGKRVGIEKLKGCEKGNAYEFELHKDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMVGRSVHDLMLKNKKLQSKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGNMGVVTACKSVGEAMEYETDGYRWLAPEIIAGDPESVTETSMSNVYSYGMVIWEMVSGEAAYSALSPVQAAVGIAACGLRPEVPKDCQPNLKYIMTKCWNNTPSKRPQFSDILAILLQPYNKNR*