AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0813510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0813510 MtrunA17_Chr5g0431191 96.791 592 18 1 1 592 1 591 0.0 1197
Msa0813510 MtrunA17_Chr3g0105891 69.103 602 162 8 1 592 1 588 0.0 836
Msa0813510 MtrunA17_Chr1g0211611 32.609 276 173 6 316 586 285 552 1.56e-49 181
Msa0813510 MtrunA17_Chr3g0143531 34.866 261 159 6 331 586 22 276 2.99e-49 172
Msa0813510 MtrunA17_Chr5g0406251 26.772 508 303 17 125 584 58 544 6.88e-48 176
Msa0813510 MtrunA17_Chr1g0202101 33.591 259 160 6 327 580 276 527 1.03e-46 172
Msa0813510 MtrunA17_Chr3g0090261 32.000 275 171 6 320 584 68 336 1.80e-41 153
Msa0813510 MtrunA17_Chr4g0075541 28.428 299 186 9 302 584 55 341 6.80e-37 141
Msa0813510 MtrunA17_Chr4g0059121 28.261 276 178 7 321 584 45 312 1.10e-35 137
Msa0813510 MtrunA17_Chr2g0282321 27.273 319 199 11 278 586 124 419 3.43e-35 138
Msa0813510 MtrunA17_Chr3g0117731 28.049 246 165 5 345 584 72 311 4.28e-34 132
Msa0813510 MtrunA17_Chr7g0244621 28.102 274 180 7 325 584 36 306 4.91e-32 127
Msa0813510 MtrunA17_Chr4g0047211 26.295 251 169 7 345 586 54 297 4.47e-31 124
Msa0813510 MtrunA17_Chr4g0047191 26.295 251 169 7 345 586 59 302 5.84e-31 124
Msa0813510 MtrunA17_Chr1g0157231 28.761 226 149 5 327 547 139 357 1.30e-30 123
Msa0813510 MtrunA17_Chr3g0117811 26.136 264 167 5 345 584 75 334 2.23e-30 122
Msa0813510 MtrunA17_Chr4g0047201 27.670 206 139 5 384 586 260 458 3.30e-30 124
Msa0813510 MtrunA17_Chr4g0059181 26.515 264 166 6 345 584 104 363 9.23e-30 121
Msa0813510 MtrunA17_Chr1g0205071 25.606 289 182 5 325 584 69 353 9.81e-30 121
Msa0813510 MtrunA17_Chr8g0388891 29.455 275 157 7 320 584 119 366 1.18e-29 121
Msa0813510 MtrunA17_Chr6g0449241 28.000 275 180 7 326 586 18 288 3.52e-29 119
Msa0813510 MtrunA17_Chr2g0305141 30.070 286 172 13 330 592 1080 1360 1.10e-28 122
Msa0813510 MtrunA17_Chr5g0394681 30.811 185 122 2 402 584 181 361 4.64e-28 116
Msa0813510 MtrunA17_Chr4g0065211 29.478 268 167 11 330 580 1118 1380 5.68e-28 120
Msa0813510 MtrunA17_Chr3g0116981 28.000 275 178 9 326 585 18 287 6.90e-28 115
Msa0813510 MtrunA17_Chr6g0461841 30.576 278 163 13 328 584 962 1230 4.25e-27 117
Msa0813510 MtrunA17_Chr4g0068411 26.721 247 169 5 338 577 464 705 5.12e-27 116
Msa0813510 MtrunA17_Chr6g0450871 26.515 264 166 6 345 584 87 346 1.83e-26 111
Msa0813510 MtrunA17_Chr4g0072741 28.231 294 182 11 309 580 808 1094 2.76e-26 114
Msa0813510 MtrunA17_Chr2g0310761 29.304 273 165 11 328 580 934 1198 3.59e-25 111
Msa0813510 MtrunA17_Chr2g0294351 25.984 254 176 5 338 584 470 718 7.93e-25 109
Msa0813510 MtrunA17_Chr1g0196631 28.782 271 165 12 330 580 897 1159 2.85e-24 108
Msa0813510 MtrunA17_Chr5g0427651 26.909 275 172 9 327 584 638 900 4.08e-24 107
Msa0813510 MtrunA17_Chr8g0357611 28.674 279 168 11 328 584 1364 1633 7.49e-24 107
Msa0813510 MtrunA17_Chr5g0397931 24.806 258 184 4 334 585 423 676 3.04e-23 104
Msa0813510 MtrunA17_Chr1g0191171 24.231 260 184 6 338 590 693 946 1.53e-22 102
Msa0813510 MtrunA17_Chr2g0310781 27.437 277 173 11 328 584 840 1108 1.69e-22 102
Msa0813510 MtrunA17_Chr8g0392871 24.275 276 196 7 322 590 727 996 2.56e-22 102
Msa0813510 MtrunA17_Chr1g0151541 25.357 280 179 9 323 586 652 917 3.63e-22 101
Msa0813510 MtrunA17_Chr6g0482711 23.827 277 196 7 322 590 648 917 3.23e-21 98.6
Msa0813510 MtrunA17_Chr3g0132791 24.731 279 175 8 329 584 641 907 5.83e-21 97.8
Msa0813510 MtrunA17_Chr1g0179331 24.427 262 181 7 338 587 559 815 9.47e-20 93.6
Msa0813510 MtrunA17_Chr1g0171451 24.324 259 180 7 338 586 418 670 1.78e-19 92.4
Msa0813510 MtrunA17_Chr4g0042731 25.091 275 182 10 327 584 134 401 4.42e-19 90.1
Msa0813510 MtrunA17_Chr2g0284901 25.267 281 187 12 323 589 142 413 5.28e-18 87.0
Msa0813510 MtrunA17_Chr8g0380551 26.613 248 162 10 351 584 244 485 7.57e-18 87.0
Msa0813510 MtrunA17_Chr3g0136131 22.727 286 191 9 323 584 76 355 1.58e-17 84.7
Msa0813510 MtrunA17_Chr5g0403721 23.697 211 142 9 384 585 43 243 3.08e-16 80.5
Msa0813510 MtrunA17_Chr6g0455651 25.940 266 164 10 336 580 118 371 1.64e-15 79.0
Msa0813510 MtrunA17_Chr1g0205931 24.815 270 173 9 338 588 59 317 2.57e-15 79.3
Msa0813510 MtrunA17_Chr7g0237401 25.347 288 171 10 340 591 99 378 4.83e-15 77.8
Msa0813510 MtrunA17_Chr5g0424501 23.228 254 176 8 338 581 196 440 1.76e-14 76.3
Msa0813510 MtrunA17_Chr3g0091461 25.660 265 173 9 345 592 819 1076 2.00e-14 77.0
Msa0813510 MtrunA17_Chr3g0115171 24.057 212 154 6 363 574 320 524 2.21e-14 76.3
Msa0813510 MtrunA17_Chr1g0201241 25.000 260 166 7 351 586 746 1000 3.02e-14 76.3
Msa0813510 MtrunA17_Chr2g0317001 24.335 263 183 9 328 581 7 262 3.98e-14 75.9
Msa0813510 MtrunA17_Chr4g0063691 26.633 199 132 7 336 524 540 734 1.56e-13 73.9
Msa0813510 MtrunA17_Chr4g0051191 23.874 222 159 6 361 579 199 413 2.54e-13 72.4
Msa0813510 MtrunA17_Chr2g0288121 27.500 200 127 6 340 526 48 242 2.84e-13 71.6
Msa0813510 MtrunA17_Chr4g0000431 24.354 271 182 10 327 581 17 280 3.23e-13 72.8
Msa0813510 MtrunA17_Chr5g0447731 24.627 268 170 10 333 581 22 276 3.48e-13 70.5
Msa0813510 MtrunA17_Chr4g0061201 24.719 267 168 9 345 585 823 1082 3.88e-13 72.8
Msa0813510 MtrunA17_Chr6g0467281 27.962 211 128 8 336 530 489 691 4.75e-13 72.4
Msa0813510 MtrunA17_Chr5g0413071 24.917 301 169 11 322 582 300 583 1.15e-12 70.9
Msa0813510 MtrunA17_Chr1g0191631 28.500 200 128 6 345 535 166 359 1.15e-12 70.5
Msa0813510 MtrunA17_Chr4g0038091 23.970 267 176 9 338 591 24 276 1.76e-12 70.9
Msa0813510 MtrunA17_Chr3g0137191 28.906 256 148 12 354 585 91 336 2.30e-12 68.9
Msa0813510 MtrunA17_Chr3g0137741 26.442 208 132 7 336 530 494 693 2.32e-12 70.1
Msa0813510 MtrunA17_Chr6g0453001 28.788 198 117 7 350 535 85 270 2.33e-12 69.3
Msa0813510 MtrunA17_Chr4g0038501 23.596 267 177 9 338 591 24 276 2.62e-12 70.1
Msa0813510 MtrunA17_Chr8g0340891 24.101 278 172 10 336 584 567 834 2.82e-12 69.7
Msa0813510 MtrunA17_Chr8g0347481 24.153 236 154 8 372 584 272 505 3.09e-12 69.3
Msa0813510 MtrunA17_Chr2g0296591 26.357 258 143 11 369 586 981 1231 3.55e-12 69.7
Msa0813510 MtrunA17_Chr2g0333691 27.917 240 141 11 369 585 162 392 3.91e-12 68.6
Msa0813510 MtrunA17_Chr2g0324931 30.992 242 132 13 310 527 664 894 4.91e-12 69.3
Msa0813510 MtrunA17_Chr1g0189791 26.217 267 163 10 345 584 86 345 5.61e-12 68.6
Msa0813510 MtrunA17_Chr4g0031601 26.667 240 131 11 379 584 146 374 6.34e-12 68.2
Msa0813510 MtrunA17_Chr7g0217041 26.250 240 148 10 311 527 492 725 8.60e-12 68.2
Msa0813510 MtrunA17_Chr5g0441021 26.394 269 158 9 351 591 102 358 9.78e-12 67.4
Msa0813510 MtrunA17_Chr3g0143961 25.455 275 168 8 340 584 74 341 1.08e-11 67.0
Msa0813510 MtrunA17_Chr1g0158391 27.778 216 118 10 335 527 258 458 1.09e-11 67.8
Msa0813510 MtrunA17_Chr7g0245571 25.952 289 170 13 329 584 91 368 1.28e-11 67.0
Msa0813510 MtrunA17_Chr6g0467301 27.230 213 131 8 336 532 494 698 1.47e-11 67.4
Msa0813510 MtrunA17_Chr4g0064201 29.299 157 101 4 384 535 174 325 1.59e-11 66.6
Msa0813510 MtrunA17_Chr7g0251771 28.986 207 123 7 340 530 57 255 1.60e-11 66.6
Msa0813510 MtrunA17_Chr8g0362661 25.778 225 136 7 384 584 197 414 1.62e-11 67.0
Msa0813510 MtrunA17_Chr3g0093381 27.984 243 141 8 370 584 153 389 2.08e-11 66.2
Msa0813510 MtrunA17_Chr5g0439621 23.529 289 156 12 345 586 457 727 2.16e-11 67.0
Msa0813510 MtrunA17_Chr1g0161721 27.155 232 143 9 315 527 559 783 2.73e-11 66.6
Msa0813510 MtrunA17_Chr3g0129771 22.490 249 169 9 333 566 32 271 2.74e-11 66.6
Msa0813510 MtrunA17_Chr6g0467701 28.230 209 126 9 335 527 35 235 2.83e-11 65.5
Msa0813510 MtrunA17_Chr1g0158771 26.794 209 129 9 335 527 290 490 2.94e-11 66.2
Msa0813510 MtrunA17_Chr2g0321841 22.015 268 190 7 332 588 2 261 3.00e-11 66.6
Msa0813510 MtrunA17_Chr7g0225201 23.282 262 181 9 333 581 26 280 3.09e-11 64.7
Msa0813510 MtrunA17_Chr3g0104091 28.283 198 118 7 350 535 84 269 3.13e-11 65.9
Msa0813510 MtrunA17_Chr6g0467681 28.704 216 116 10 335 527 265 465 3.26e-11 66.2
Msa0813510 MtrunA17_Chr5g0439601 22.476 307 178 12 328 586 306 600 3.41e-11 66.2
Msa0813510 MtrunA17_Chr4g0022331 22.456 285 181 10 335 587 533 809 3.70e-11 66.2
Msa0813510 MtrunA17_Chr5g0423891 24.911 281 169 9 335 584 164 433 3.79e-11 65.9
Msa0813510 MtrunA17_Chr4g0047561 26.267 217 134 8 329 529 42 248 3.87e-11 65.1
Msa0813510 MtrunA17_Chr1g0158531 26.852 216 130 8 336 533 292 497 4.30e-11 65.9
Msa0813510 MtrunA17_Chr6g0487571 24.567 289 164 14 340 586 577 853 4.51e-11 65.9
Msa0813510 MtrunA17_Chr7g0238671 29.630 189 116 6 350 529 104 284 4.70e-11 65.1
Msa0813510 MtrunA17_Chr2g0314611 27.692 195 124 8 345 530 500 686 5.15e-11 65.9
Msa0813510 MtrunA17_Chr6g0467661 28.704 216 116 10 335 527 265 465 5.89e-11 65.5
Msa0813510 MtrunA17_Chr1g0149381 27.143 210 127 10 336 530 504 702 5.98e-11 65.5
Msa0813510 MtrunA17_Chr3g0116811 21.455 275 185 10 331 588 23 283 6.67e-11 65.1
Msa0813510 MtrunA17_Chr3g0088341 27.064 218 119 10 335 527 279 481 7.49e-11 65.1
Msa0813510 MtrunA17_Chr8g0340871 24.549 277 171 12 336 584 578 844 8.24e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0813510 AT5G58520.1 60.848 613 208 9 1 590 1 604 0.0 727
Msa0813510 AT5G07140.1 59.328 595 225 7 1 590 1 583 0.0 667
Msa0813510 AT2G17700.1 32.852 277 171 6 317 586 269 537 4.72e-51 184
Msa0813510 AT4G35780.1 34.066 273 163 8 322 586 280 543 3.34e-49 180
Msa0813510 AT4G38470.2 31.392 309 192 8 289 584 238 539 4.12e-48 177
Msa0813510 AT4G38470.1 31.392 309 192 8 289 584 238 539 5.32e-48 177
Msa0813510 AT4G31170.7 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0813510 AT4G31170.6 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0813510 AT4G31170.5 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0813510 AT4G31170.1 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0813510 AT4G31170.2 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0813510 AT4G31170.3 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0813510 AT4G31170.8 34.146 246 150 5 345 584 146 385 1.52e-39 150
Msa0813510 AT1G62400.1 29.252 294 182 8 306 584 58 340 8.19e-38 144
Msa0813510 AT5G58950.1 27.374 358 211 13 249 586 137 465 8.14e-37 144
Msa0813510 AT4G38470.3 30.712 267 165 8 289 542 238 497 1.97e-35 140
Msa0813510 AT2G24360.1 32.520 246 154 5 345 584 145 384 1.14e-34 136
Msa0813510 AT3G27560.1 28.000 275 180 8 326 586 18 288 2.45e-31 125
Msa0813510 AT4G14780.1 27.083 288 178 6 325 584 52 335 2.24e-30 122
Msa0813510 AT5G50000.1 26.136 264 167 5 345 584 97 356 1.09e-29 121
Msa0813510 AT5G01850.1 29.078 282 180 9 319 584 2 279 2.00e-29 119
Msa0813510 AT3G22750.1 25.260 289 183 5 325 584 65 349 4.04e-29 119
Msa0813510 AT3G24715.1 31.636 275 160 12 330 584 833 1099 5.38e-29 123
Msa0813510 AT3G24715.3 31.636 275 160 12 330 584 833 1099 5.38e-29 123
Msa0813510 AT3G24715.2 31.636 275 160 12 330 584 833 1099 5.38e-29 123
Msa0813510 AT5G40540.1 27.698 278 177 9 326 586 18 288 4.18e-28 116
Msa0813510 AT5G57610.1 30.112 269 161 10 332 580 779 1040 6.92e-28 120
Msa0813510 AT3G01490.1 25.000 264 170 5 345 584 123 382 1.36e-27 115
Msa0813510 AT5G50180.1 27.240 279 185 9 326 590 12 286 1.36e-27 114
Msa0813510 AT3G46930.2 26.190 252 162 7 345 584 216 455 1.92e-27 116
Msa0813510 AT3G46930.1 26.190 252 162 7 345 584 181 420 2.39e-27 116
Msa0813510 AT3G63260.1 24.907 269 169 5 345 584 98 362 1.22e-26 112
Msa0813510 AT5G01850.2 31.068 206 132 5 386 584 101 303 2.88e-26 110
Msa0813510 AT2G35050.1 28.938 273 166 10 328 580 968 1232 3.40e-26 114
Msa0813510 AT2G35050.2 28.938 273 166 10 328 580 968 1232 3.40e-26 114
Msa0813510 AT3G46920.1 28.470 281 179 11 319 581 790 1066 6.71e-26 113
Msa0813510 AT3G46920.2 28.470 281 179 11 319 581 856 1132 7.26e-26 113
Msa0813510 AT5G40540.2 29.577 213 133 7 384 586 7 212 2.63e-25 106
Msa0813510 AT5G49470.1 26.378 254 175 6 338 584 208 456 4.32e-25 109
Msa0813510 AT1G67890.1 27.799 259 168 8 338 586 491 740 4.88e-25 110
Msa0813510 AT5G49470.3 26.172 256 177 6 338 586 495 745 9.98e-25 109
Msa0813510 AT5G49470.4 26.172 256 177 6 338 586 469 719 1.19e-24 109
Msa0813510 AT5G49470.7 26.172 256 177 6 338 586 368 618 1.64e-24 108
Msa0813510 AT5G66710.1 27.239 268 174 10 328 580 65 326 7.86e-24 104
Msa0813510 AT1G08720.1 24.809 262 184 6 336 590 671 926 1.83e-23 105
Msa0813510 AT3G06630.2 25.385 260 182 6 332 584 432 686 2.77e-23 105
Msa0813510 AT1G04700.1 27.500 280 170 11 334 587 766 1038 3.68e-23 105
Msa0813510 AT1G04700.2 27.500 280 170 11 334 587 766 1038 3.68e-23 105
Msa0813510 AT1G16270.1 28.777 278 168 12 328 584 858 1126 4.02e-23 105
Msa0813510 AT1G16270.2 28.777 278 168 12 328 584 858 1126 4.02e-23 105
Msa0813510 AT1G16270.3 28.777 278 168 12 328 584 858 1126 4.02e-23 105
Msa0813510 AT5G11850.1 23.792 269 193 5 323 584 598 861 5.34e-23 104
Msa0813510 AT1G18160.1 27.820 266 168 10 334 586 715 969 8.00e-23 103
Msa0813510 AT3G06620.1 25.000 260 183 6 332 584 492 746 9.76e-23 103
Msa0813510 AT4G23050.1 22.264 265 192 6 334 590 467 725 9.91e-23 103
Msa0813510 AT4G23050.2 22.264 265 192 6 334 590 468 726 1.03e-22 103
Msa0813510 AT3G06640.1 25.000 260 183 6 332 584 444 698 1.11e-22 103
Msa0813510 AT5G40540.3 29.592 196 123 6 401 586 1 191 1.29e-22 98.2
Msa0813510 AT3G06640.2 25.000 260 183 6 332 584 444 698 1.34e-22 102
Msa0813510 AT3G06640.3 25.000 260 183 6 332 584 444 698 1.34e-22 102
Msa0813510 AT1G79570.2 28.727 275 168 11 330 584 961 1227 2.00e-22 102
Msa0813510 AT1G79570.1 28.727 275 168 11 330 584 961 1227 2.00e-22 102
Msa0813510 AT5G03730.2 24.615 260 182 5 334 584 551 805 5.60e-22 101
Msa0813510 AT5G03730.1 24.615 260 182 5 334 584 551 805 5.60e-22 101
Msa0813510 AT1G73660.1 25.180 278 194 6 315 584 729 1000 5.65e-22 101
Msa0813510 AT1G67890.4 27.801 241 155 8 338 568 363 594 2.23e-21 99.0
Msa0813510 AT1G67890.3 27.801 241 155 8 338 568 491 722 2.25e-21 99.0
Msa0813510 AT1G67890.2 27.801 241 155 8 338 568 491 722 2.25e-21 99.0
Msa0813510 AT4G24480.2 25.091 275 177 8 327 584 661 923 4.10e-21 98.6
Msa0813510 AT4G24480.3 25.091 275 177 8 327 584 661 923 4.62e-21 98.6
Msa0813510 AT1G14000.1 28.372 215 139 7 379 584 212 420 5.31e-21 96.7
Msa0813510 AT4G24480.1 25.714 280 174 10 327 584 661 928 1.22e-20 97.1
Msa0813510 AT3G06630.1 25.000 244 171 6 332 568 432 670 1.23e-20 96.7
Msa0813510 AT4G18950.2 25.000 276 184 12 323 584 147 413 1.38e-19 92.0
Msa0813510 AT4G18950.1 25.000 276 184 12 323 584 147 413 1.40e-19 92.4
Msa0813510 AT1G08720.2 24.268 239 169 5 336 567 671 904 2.80e-19 92.8
Msa0813510 AT3G50720.1 25.461 271 175 11 328 580 42 303 3.44e-19 90.1
Msa0813510 AT3G50730.1 25.455 275 179 10 328 584 30 296 5.41e-19 89.7
Msa0813510 AT1G18160.2 27.126 247 156 10 334 567 715 950 1.35e-18 90.5
Msa0813510 AT1G74360.1 27.660 282 165 11 336 586 814 1087 4.94e-18 89.0
Msa0813510 AT5G40540.4 24.419 258 165 8 326 569 18 259 9.60e-18 84.3
Msa0813510 AT5G50000.2 26.577 222 133 6 345 540 97 314 1.02e-17 85.1
Msa0813510 AT3G46930.3 25.000 200 127 6 345 533 216 403 9.78e-17 83.2
Msa0813510 AT3G46930.4 25.000 200 127 6 345 533 216 403 9.98e-17 83.2
Msa0813510 AT3G46930.6 25.000 200 127 6 345 533 120 307 1.29e-16 82.0
Msa0813510 AT3G46930.5 25.000 200 127 6 345 533 181 368 2.10e-16 82.0
Msa0813510 AT3G06030.1 25.385 260 172 6 338 581 72 325 3.21e-16 82.8
Msa0813510 AT1G09000.2 25.670 261 166 7 340 581 75 326 3.86e-16 82.4
Msa0813510 AT1G09000.1 25.670 261 166 7 340 581 75 326 3.94e-16 82.4
Msa0813510 AT1G54960.1 24.419 258 173 7 340 581 74 325 6.07e-16 81.6
Msa0813510 AT1G54960.2 24.419 258 173 7 340 581 74 325 6.07e-16 81.6
Msa0813510 AT4G08470.1 25.600 250 172 9 340 581 309 552 7.99e-16 81.3
Msa0813510 AT2G31800.1 23.944 284 183 11 323 584 182 454 1.44e-15 80.1
Msa0813510 AT4G08470.3 25.200 250 173 9 340 581 227 470 1.94e-15 79.7
Msa0813510 AT3G59830.1 25.957 235 151 7 363 584 231 455 3.07e-15 79.0
Msa0813510 AT3G06630.4 24.651 215 150 6 332 539 432 641 6.05e-15 78.6
Msa0813510 AT3G06630.3 24.651 215 150 6 332 539 432 641 6.05e-15 78.6
Msa0813510 AT3G06630.5 24.651 215 150 6 332 539 432 641 6.05e-15 78.6
Msa0813510 AT4G31170.9 31.013 158 101 4 345 496 146 301 7.16e-15 76.3
Msa0813510 AT4G31170.10 31.013 158 101 4 345 496 146 301 7.16e-15 76.3
Msa0813510 AT4G31170.4 31.013 158 101 4 345 496 146 301 7.16e-15 76.3
Msa0813510 AT4G08480.1 26.761 213 146 6 371 581 546 750 8.54e-15 78.2
Msa0813510 AT4G08500.1 26.066 211 150 6 371 581 378 582 9.43e-15 77.8
Msa0813510 AT3G63260.2 23.744 219 134 5 345 534 98 312 1.15e-14 76.3
Msa0813510 AT3G06630.6 24.651 215 150 6 332 539 348 557 1.34e-14 77.4
Msa0813510 AT5G49470.5 25.121 207 143 6 338 537 495 696 1.35e-14 77.4
Msa0813510 AT5G41730.2 24.895 237 150 8 372 584 274 506 1.48e-14 77.4
Msa0813510 AT5G41730.1 24.895 237 150 8 372 584 274 506 1.48e-14 77.4
Msa0813510 AT5G49470.6 25.121 207 143 6 338 537 495 696 1.51e-14 77.4
Msa0813510 AT3G58640.1 23.759 282 171 10 325 585 544 802 1.81e-14 77.4
Msa0813510 AT3G58640.2 23.759 282 171 10 325 585 544 802 1.81e-14 77.4
Msa0813510 AT3G01490.2 23.364 214 136 5 345 534 123 332 3.45e-14 74.7
Msa0813510 AT1G64300.2 26.891 238 147 10 372 584 274 509 6.74e-14 75.5
Msa0813510 AT1G64300.1 26.891 238 147 10 372 584 274 509 6.74e-14 75.5
Msa0813510 AT5G49470.2 26.812 138 97 2 447 584 671 804 6.78e-14 75.5
Msa0813510 AT1G69790.2 27.376 263 150 10 351 586 105 353 1.06e-13 73.6
Msa0813510 AT1G69790.1 27.376 263 150 10 351 586 116 364 1.35e-13 73.2
Msa0813510 AT3G07980.1 25.746 268 170 10 338 591 24 276 4.46e-13 73.2
Msa0813510 AT3G07980.2 25.746 268 170 10 338 591 24 276 5.09e-13 72.8
Msa0813510 AT1G63700.1 22.642 212 157 4 371 581 446 651 5.29e-13 72.8
Msa0813510 AT1G63700.2 22.642 212 157 4 371 581 446 651 5.29e-13 72.8
Msa0813510 AT1G34110.2 24.670 227 141 7 384 586 831 1051 6.52e-13 72.4
Msa0813510 AT3G15220.1 23.506 251 178 8 338 581 19 262 6.89e-13 72.0
Msa0813510 AT1G34110.1 24.670 227 141 7 384 586 831 1051 8.09e-13 72.0
Msa0813510 AT5G54590.3 25.362 276 165 10 336 584 115 376 9.45e-13 70.9
Msa0813510 AT5G54590.4 25.362 276 165 10 336 584 115 376 9.45e-13 70.9
Msa0813510 AT5G54590.2 25.362 276 165 10 336 584 115 376 9.45e-13 70.9
Msa0813510 AT1G54820.1 25.175 286 167 12 345 590 159 437 1.30e-12 70.5
Msa0813510 AT4G11900.1 22.545 275 178 10 338 584 541 808 1.43e-12 71.2
Msa0813510 AT4G11900.9 22.545 275 178 10 338 584 472 739 1.51e-12 71.2
Msa0813510 AT3G13530.1 23.596 267 177 9 338 591 24 276 2.91e-12 70.5
Msa0813510 AT3G58760.3 23.715 253 172 10 344 584 244 487 3.47e-12 69.7
Msa0813510 AT3G58760.5 23.715 253 172 10 344 584 244 487 3.47e-12 69.7
Msa0813510 AT3G58760.1 23.715 253 172 10 344 584 181 424 3.57e-12 69.3
Msa0813510 AT3G58690.1 29.442 197 117 9 345 527 102 290 3.57e-12 68.9
Msa0813510 AT1G54820.2 27.358 212 126 9 345 535 159 363 5.80e-12 68.2
Msa0813510 AT5G56460.1 26.360 239 143 9 370 581 121 353 6.78e-12 68.2
Msa0813510 AT1G01450.1 25.541 231 146 9 379 584 71 300 7.57e-12 68.2
Msa0813510 AT1G34300.1 27.619 210 127 8 336 530 486 685 1.12e-11 68.6
Msa0813510 AT4G04510.1 24.028 283 180 11 328 584 333 606 1.52e-11 67.8
Msa0813510 AT4G04510.2 24.028 283 180 11 328 584 335 608 2.01e-11 67.4
Msa0813510 AT4G28490.1 26.027 292 171 13 331 584 680 964 2.12e-11 67.8
Msa0813510 AT3G04690.1 25.000 260 165 11 345 581 532 784 2.52e-11 67.4
Msa0813510 AT5G15080.1 29.299 157 102 4 384 535 205 357 2.64e-11 66.6
Msa0813510 AT1G10620.1 25.000 200 134 7 345 536 385 576 2.93e-11 67.0
Msa0813510 AT5G02290.2 30.387 181 105 7 370 536 113 286 3.34e-11 65.9
Msa0813510 AT5G02290.1 30.387 181 105 7 370 536 113 286 3.34e-11 65.9
Msa0813510 AT3G01300.1 30.405 148 94 4 384 526 199 342 3.39e-11 66.2
Msa0813510 AT1G17230.1 22.179 257 172 7 351 584 821 1072 3.48e-11 67.0
Msa0813510 AT1G53165.3 23.904 251 177 8 338 581 19 262 3.57e-11 66.6
Msa0813510 AT1G53165.1 23.904 251 177 8 338 581 19 262 3.87e-11 66.6
Msa0813510 AT1G53165.2 23.904 251 177 8 338 581 19 262 3.88e-11 66.6
Msa0813510 AT1G17230.2 22.179 257 172 7 351 584 821 1072 4.86e-11 66.6
Msa0813510 AT3G51990.1 22.264 265 172 8 345 584 74 329 5.06e-11 65.1
Msa0813510 AT5G28680.1 25.000 260 165 11 345 581 536 788 6.77e-11 65.9
Msa0813510 AT5G28680.2 25.000 260 165 11 345 581 536 788 6.77e-11 65.9
Msa0813510 AT5G58350.1 25.592 211 139 7 333 531 18 222 7.53e-11 65.5
Msa0813510 AT3G18750.1 22.619 252 165 9 333 566 27 266 7.82e-11 65.5
Msa0813510 AT3G18750.3 22.619 252 165 9 333 566 27 266 7.82e-11 65.5
Msa0813510 AT3G18750.5 22.619 252 165 9 333 566 27 266 7.82e-11 65.5
Msa0813510 AT3G06230.1 25.466 161 109 5 421 574 137 293 7.94e-11 63.9
Msa0813510 AT1G49160.2 22.800 250 167 8 333 566 27 266 9.83e-11 65.1

Find 164 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGTCTCTGTCACGCTTTC+AGG 0.084916 5_3:+44383055 None:intergenic
AGTTTCAAGGGGAGAGAATT+AGG 0.131548 5_3:-44385483 Msa0813510:CDS
CACATTCACAGAACCCATTT+TGG 0.137861 5_3:+44385542 None:intergenic
CTTGCAACGCGCTCGTTTCA+TGG 0.161083 5_3:-44385734 Msa0813510:CDS
GAATGCTTGTTTGGGAAATA+TGG 0.212461 5_3:-44384902 Msa0813510:CDS
GATTGTTACTATTATTATTA+AGG 0.240120 5_3:+44386915 None:intergenic
ATAGTTATGGCATGGTAATT+TGG 0.251431 5_3:-44383018 Msa0813510:CDS
TGCTTCTCCAACACTCTTGC+AGG 0.275365 5_3:+44384867 None:intergenic
GTTTCAAGGGGAGAGAATTA+GGG 0.284749 5_3:-44385482 Msa0813510:CDS
TGAGCTCCACAAAGATCTTC+TGG 0.287634 5_3:-44385181 Msa0813510:CDS
CGCGATAAAGAAGCCCAAAA+TGG 0.292159 5_3:-44385556 Msa0813510:CDS
ATTGGACCTAATTCTTATAA+AGG 0.292494 5_3:-44385273 Msa0813510:CDS
TAGTTATGGCATGGTAATTT+GGG 0.304405 5_3:-44383017 Msa0813510:CDS
TGGCAGTCCTTGGGAACTTC+AGG 0.306822 5_3:+44382914 None:intergenic
TAGGCATGGGAATGCTTGTT+TGG 0.318792 5_3:-44384911 Msa0813510:CDS
TTGGACCTAATTCTTATAAA+GGG 0.323834 5_3:-44385272 Msa0813510:CDS
ATGAGCAATGTTTATAGTTA+TGG 0.334957 5_3:-44383031 Msa0813510:CDS
GTTTCTTCACATCAAGTTGA+TGG 0.337096 5_3:-44385862 Msa0813510:CDS
GAGAAGAAAGGTTTCACCTT+AGG 0.338642 5_3:-44385651 Msa0813510:CDS
GGGTTGTTCTTCTTGTAGTT+AGG 0.343784 5_3:-44385629 Msa0813510:CDS
ATGCTAGAAATAAGATTATC+AGG 0.346471 5_3:+44386809 None:intergenic
GAGAATTGAGGACGTTTAGA+AGG 0.350236 5_3:+44382848 None:intergenic
TAGACCCCTTTATAAGAATT+AGG 0.355185 5_3:+44385267 None:intergenic
GCGAGTTGGCCAACACTCTA+AGG 0.355419 5_3:+44387141 None:intergenic
GATGAGCATGGAAGAGTCTT+TGG 0.362735 5_3:+44387009 None:intergenic
GTGAATGTGAAGCTTTCATT+TGG 0.366497 5_3:-44385528 Msa0813510:CDS
GGTTGAAAACAGATAATTGC+AGG 0.369964 5_3:-44383082 Msa0813510:intron
TGTTCAACTGTGTCTTCATC+GGG 0.371516 5_3:+44387103 None:intergenic
AAGCTGAAAGGGTGTGAAAA+AGG 0.373240 5_3:-44385219 Msa0813510:CDS
GGGAGAGAATTAGGGGAGAT+TGG 0.373979 5_3:-44385474 Msa0813510:CDS
AAGCTTTCATTTGGACTTTG+TGG 0.376985 5_3:-44385519 Msa0813510:CDS
GAACAAGAAGCTTCAGAGTA+AGG 0.378267 5_3:-44385034 Msa0813510:CDS
TAAATTTGGTTGGCAGTCCT+TGG 0.381450 5_3:+44382904 None:intergenic
CACTACCACCCACCACCTTT+TGG 0.383600 5_3:-44387219 Msa0813510:five_prime_UTR
TTATCAGGAAGCTGAGTTCC+AGG 0.384759 5_3:+44386824 None:intergenic
TTCTTCTAAGAAACTTGCTT+GGG 0.388623 5_3:-44386879 Msa0813510:CDS
GCGTCTGAAGCTGAATCTTT+TGG 0.390642 5_3:+44385412 None:intergenic
CCTTGGGAACTTCAGGTCTA+AGG 0.390694 5_3:+44382921 None:intergenic
AGAAGAAAGGTTTCACCTTA+GGG 0.393038 5_3:-44385650 Msa0813510:CDS
ATTTGGACTTTGTGGGTGTC+AGG 0.393965 5_3:-44385511 Msa0813510:CDS
CTTCTTCTAAGAAACTTGCT+TGG 0.396933 5_3:-44386880 Msa0813510:CDS
TGGTCATGATGGTGAGGTTC+AGG 0.404945 5_3:-44385787 Msa0813510:CDS
TTGTTCAACTGTGTCTTCAT+CGG 0.412101 5_3:+44387102 None:intergenic
AAGGGGTCTACATGGGCAAA+AGG 0.417460 5_3:-44385254 Msa0813510:CDS
ATTGGAGAAGATAGTGGTAG+TGG 0.419042 5_3:-44385456 Msa0813510:CDS
CGCAGAGGATTCTGTTAGAT+AGG 0.420687 5_3:-44384930 Msa0813510:CDS
TTCTGCACTTTCTCCTGTGC+AGG 0.423025 5_3:-44382969 Msa0813510:CDS
AGAACTGCAGAATGTTTCTA+TGG 0.424331 5_3:+44385142 None:intergenic
ATGCCAACTGCTGCCTGCAC+AGG 0.425742 5_3:+44382956 None:intergenic
ATGTCTCTGTCACGCTTTCA+GGG 0.428964 5_3:+44383056 None:intergenic
CTGTGCCCTCTTGCTACAAA+TGG 0.429078 5_3:+44385680 None:intergenic
CACTCTAAGGCTGCAGCCAT+TGG 0.437134 5_3:+44387154 None:intergenic
AGTATGAAACTGATGGTTAT+AGG 0.442176 5_3:-44384840 Msa0813510:CDS
CAAGTTGATGGAACAGGCAT+TGG 0.443439 5_3:-44385850 Msa0813510:CDS
GTTGAGTTTACAGAACAGAT+TGG 0.447078 5_3:-44385291 Msa0813510:CDS
TACCTCATCTTTCATTGTAT+CGG 0.450015 5_3:-44385382 Msa0813510:CDS
AGGCATGGGAATGCTTGTTT+GGG 0.450997 5_3:-44384910 Msa0813510:CDS
GTTGTATGGTTGCAGCAATA+TGG 0.451787 5_3:+44382814 None:intergenic
TTCTTATAAAGGGGTCTACA+TGG 0.454067 5_3:-44385262 Msa0813510:CDS
GTTCTTCTTGTAGTTAGGTC+CGG 0.455700 5_3:-44385624 Msa0813510:CDS
CAGCAATATGGCTAAAATAT+CGG 0.456068 5_3:+44382826 None:intergenic
AATGCTTGTTTGGGAAATAT+GGG 0.457874 5_3:-44384901 Msa0813510:CDS
AAATTTGGTTGGCAGTCCTT+GGG 0.458152 5_3:+44382905 None:intergenic
TCACATCAAGTTGATGGAAC+AGG 0.460662 5_3:-44385856 Msa0813510:CDS
CAAGCAAGTTTCTTAGAAGA+AGG 0.461101 5_3:+44386881 None:intergenic
AGCTTTCATTTGGACTTTGT+GGG 0.461461 5_3:-44385518 Msa0813510:CDS
CGTTTCATGGCCTGCAATGT+CGG 0.462817 5_3:-44385721 Msa0813510:CDS
GCACAGATCTTTGAGAAGAA+AGG 0.464070 5_3:-44385663 Msa0813510:CDS
GCAGTTGGCATTGCAGCCTG+TGG 0.473332 5_3:-44382944 Msa0813510:CDS
ATTACAATTCTCTTCCTCTC+AGG 0.474889 5_3:-44386778 Msa0813510:intron
ATTTGTGTGGATGATAATCA+TGG 0.478820 5_3:-44385114 Msa0813510:CDS
AAGAACAAGTTTCATAAACT+TGG 0.480591 5_3:-44386983 Msa0813510:CDS
AAGGTGGTGGGTGGTAGTGT+GGG 0.480677 5_3:+44387223 None:intergenic
TCATTGTATCGGTCGATGAA+TGG 0.480681 5_3:-44385371 Msa0813510:CDS
TTAGAAGAAGGAGGAGACTC+AGG 0.481865 5_3:+44386893 None:intergenic
GGGGAGATTGGAGAAGATAG+TGG 0.483318 5_3:-44385462 Msa0813510:CDS
GTAATTTGGGAGATGGTTAG+TGG 0.485452 5_3:-44383004 Msa0813510:CDS
GTCTACATGGGCAAAAGGGT+TGG 0.488203 5_3:-44385249 Msa0813510:CDS
AAAGGTGGTGGGTGGTAGTG+TGG 0.488575 5_3:+44387222 None:intergenic
TCTCCTGTGCAGGCAGCAGT+TGG 0.491474 5_3:-44382959 Msa0813510:CDS
ACTTCAAAGCATTCTCAACT+CGG 0.492323 5_3:+44385580 None:intergenic
TGGCATGGTAATTTGGGAGA+TGG 0.495831 5_3:-44383011 Msa0813510:CDS
GCGATAAAGAAGCCCAAAAT+GGG 0.496861 5_3:-44385555 Msa0813510:CDS
CTTGTTCTTGTTGATGAGCA+TGG 0.498819 5_3:+44386997 None:intergenic
AATCTTACTCAACTCTATCC+TGG 0.504666 5_3:-44386842 Msa0813510:CDS
TGTGTCTTCATCGGGGATAG+TGG 0.507676 5_3:+44387111 None:intergenic
TTATAGGTGGCTTGCTCCTG+AGG 0.507977 5_3:-44384824 Msa0813510:intron
TAAGGATATTGTTAGAATTG+CGG 0.510429 5_3:-44385016 Msa0813510:CDS
GCCTGCAATGTCGGTTGCGT+TGG 0.515087 5_3:-44385712 Msa0813510:CDS
GAAGAAAGGCCAAAAGGTGG+TGG 0.517481 5_3:+44387210 None:intergenic
TCCAACGCAACCGACATTGC+AGG 0.519201 5_3:+44385711 None:intergenic
AGAAGATAGTGGTAGTGGAA+AGG 0.520028 5_3:-44385451 Msa0813510:CDS
ATGTGTGGTGACTAAGTTCA+TGG 0.520912 5_3:-44385088 Msa0813510:CDS
ATCAAGTTTATGAATGATCA+TGG 0.521097 5_3:-44384976 Msa0813510:CDS
CTTCAAAGCATTCTCAACTC+GGG 0.521226 5_3:+44385581 None:intergenic
AATACATTATGACAAAATGC+TGG 0.527063 5_3:-44382880 Msa0813510:CDS
ATAGTGGTTGTGGTGCGAGT+TGG 0.530141 5_3:+44387127 None:intergenic
TCAGTTCCAGAAGATCTTTG+TGG 0.532536 5_3:+44385175 None:intergenic
TGTCAGGAAGAGAGTTTCAA+GGG 0.533723 5_3:-44385495 Msa0813510:CDS
TTTCAAGGGGAGAGAATTAG+GGG 0.533893 5_3:-44385481 Msa0813510:CDS
TTGGAATCGAGAAGCTGAAA+GGG 0.535508 5_3:-44385230 Msa0813510:CDS
AGAATTGAGGACGTTTAGAA+GGG 0.537103 5_3:+44382849 None:intergenic
GATGGTGAGGTTCAGGCTCA+AGG 0.537632 5_3:-44385780 Msa0813510:CDS
AGGGGTCTACATGGGCAAAA+GGG 0.542873 5_3:-44385253 Msa0813510:CDS
CAAGAGAGTGGTGGTCATGA+TGG 0.544175 5_3:-44385798 Msa0813510:CDS
TGGCTGCAGCCTTAGAGTGT+TGG 0.551534 5_3:-44387150 Msa0813510:CDS
TTCATCGGGGATAGTGGTTG+TGG 0.551574 5_3:+44387117 None:intergenic
AACTTCAGGTCTAAGGCCAC+AGG 0.552416 5_3:+44382928 None:intergenic
CAAGAGTGTTGGAGAAGCAA+TGG 0.554989 5_3:-44384863 Msa0813510:CDS
TTGGGAGATGGTTAGTGGTG+AGG 0.559835 5_3:-44382999 Msa0813510:CDS
GCAGTTCTGTGGTATTTGTG+TGG 0.561960 5_3:-44385127 Msa0813510:CDS
GCTAAAATATCGGAGAATTG+AGG 0.562943 5_3:+44382836 None:intergenic
AGGATTCTGTTAGATAGGCA+TGG 0.562984 5_3:-44384925 Msa0813510:CDS
GTGTCAGGAAGAGAGTTTCA+AGG 0.564199 5_3:-44385496 Msa0813510:CDS
GTTTCTCCATTTGTAGCAAG+AGG 0.565295 5_3:-44385686 Msa0813510:CDS
TTGAGAGAAGAAAGGCCAAA+AGG 0.567495 5_3:+44387204 None:intergenic
TCTTGTTGAATCAAAATCGC+AGG 0.568291 5_3:+44385816 None:intergenic
GGATTCTGTTAGATAGGCAT+GGG 0.573192 5_3:-44384924 Msa0813510:CDS
ACAGGCTGAATTTGATATGA+AGG 0.574972 5_3:-44385889 Msa0813510:CDS
GAATGGCAGACGATAAAGTC+GGG 0.578635 5_3:-44385354 Msa0813510:CDS
ATGGTGAGGTTCAGGCTCAA+GGG 0.579331 5_3:-44385779 Msa0813510:CDS
TACAAGAAGAACAACCCCTA+AGG 0.582595 5_3:+44385635 None:intergenic
AGGTGGTGGGTGGTAGTGTG+GGG 0.586813 5_3:+44387224 None:intergenic
GCAAGTTTCTTAGAAGAAGG+AGG 0.589011 5_3:+44386884 None:intergenic
TTTCTCCATTTGTAGCAAGA+GGG 0.591140 5_3:-44385685 Msa0813510:CDS
GAAGAAAGGTTTCACCTTAG+GGG 0.593785 5_3:-44385649 Msa0813510:CDS
TGGACCTAATTCTTATAAAG+GGG 0.597478 5_3:-44385271 Msa0813510:CDS
GTCACTGCCTGCAAGAGTGT+TGG 0.600671 5_3:-44384874 Msa0813510:CDS
CCTTAGACCTGAAGTTCCCA+AGG 0.606630 5_3:-44382921 Msa0813510:CDS
AAGAAGTAGCTTCTGATCTG+TGG 0.612811 5_3:+44387056 None:intergenic
TTGATTCAACAAGAGAGTGG+TGG 0.613857 5_3:-44385807 Msa0813510:CDS
GTGGTGATGAGATTGAGAAA+TGG 0.615939 5_3:-44385332 Msa0813510:CDS
ACTCCACCTCACATTTCCAA+TGG 0.616203 5_3:-44387170 Msa0813510:exon
CAATGTTTATAGTTATGGCA+TGG 0.619440 5_3:-44383026 Msa0813510:CDS
AGCATGGAAGAGTCTTTGGA+AGG 0.620696 5_3:+44387013 None:intergenic
GTTGGAATCGAGAAGCTGAA+AGG 0.624258 5_3:-44385231 Msa0813510:CDS
TCTTATAAAGGGGTCTACAT+GGG 0.626427 5_3:-44385261 Msa0813510:CDS
AATTGCGGTTGATGTAGCTG+AGG 0.627622 5_3:-44385001 Msa0813510:CDS
GTTGTGATTTGAGAGAAGAA+AGG 0.627734 5_3:+44387196 None:intergenic
ATTGCGGTTGATGTAGCTGA+GGG 0.629504 5_3:-44385000 Msa0813510:CDS
ATGAAAGATGAGGTAGGCAA+AGG 0.629996 5_3:+44385390 None:intergenic
CTTCTGGAACTGATGACTTG+TGG 0.631808 5_3:-44385165 Msa0813510:CDS
AGAAACATTCTGCAGTTCTG+TGG 0.635046 5_3:-44385138 Msa0813510:CDS
GACCGATACAATGAAAGATG+AGG 0.639889 5_3:+44385380 None:intergenic
AAGAAAGGCCAAAAGGTGGT+GGG 0.647103 5_3:+44387211 None:intergenic
CAGCCATTGGAAATGTGAGG+TGG 0.647693 5_3:+44387167 None:intergenic
TGAATGGCAGACGATAAAGT+CGG 0.664247 5_3:-44385355 Msa0813510:CDS
AAAGGCCAAAAGGTGGTGGG+TGG 0.666108 5_3:+44387214 None:intergenic
ATGAAACTGATGGTTATAGG+TGG 0.668554 5_3:-44384837 Msa0813510:CDS
GTCAGGAAGAGAGTTTCAAG+GGG 0.668955 5_3:-44385494 Msa0813510:CDS
TTTGTGTGGATGATAATCAT+GGG 0.672227 5_3:-44385113 Msa0813510:CDS
GATACAATGAAAGATGAGGT+AGG 0.673973 5_3:+44385384 None:intergenic
TGGAAATGTGAGGTGGAGTG+TGG 0.675701 5_3:+44387174 None:intergenic
GAATTGAGGACGTTTAGAAG+GGG 0.676264 5_3:+44382850 None:intergenic
GCAATGGAGTATGAAACTGA+TGG 0.679395 5_3:-44384847 Msa0813510:CDS
GTGGTGACTAAGTTCATGGT+AGG 0.687017 5_3:-44385084 Msa0813510:CDS
AGAGAAGAAAGGCCAAAAGG+TGG 0.687156 5_3:+44387207 None:intergenic
ACAGAGATCTTAATACGCAG+AGG 0.689031 5_3:-44384945 Msa0813510:CDS
GAGTGGTGGTCATGATGGTG+AGG 0.691345 5_3:-44385793 Msa0813510:CDS
GTTCAACTGTGTCTTCATCG+GGG 0.707118 5_3:+44387104 None:intergenic
TGATAATCATGGGTTATGTG+TGG 0.712559 5_3:-44385103 Msa0813510:CDS
TGGCAGACGATAAAGTCGGG+TGG 0.713223 5_3:-44385351 Msa0813510:CDS
CTGCAGCCATTGGAAATGTG+AGG 0.729871 5_3:+44387164 None:intergenic
TTGCGGTTGATGTAGCTGAG+GGG 0.764086 5_3:-44384999 Msa0813510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTAACTTGAAAAAAAA+GGG + chr5_3:44385153-44385172 None:intergenic 10.0%
!!! AATTATTAACTTGAAAAAAA+AGG + chr5_3:44385154-44385173 None:intergenic 10.0%
!! AAAAAAAAACTATCTAATAA+AGG - chr5_3:44386542-44386561 Msa0813510:intron 10.0%
!! GATTGTTACTATTATTATTA+AGG + chr5_3:44383023-44383042 None:intergenic 15.0%
!! ATATAATCTAGTATTCAATT+TGG + chr5_3:44383225-44383244 None:intergenic 15.0%
!! TCTATGAAATTACTATAATA+AGG - chr5_3:44383683-44383702 Msa0813510:intron 15.0%
!! TCAATGAAATATGATAAAAT+TGG - chr5_3:44383796-44383815 Msa0813510:intron 15.0%
!! CAATGAAATATGATAAAATT+GGG - chr5_3:44383797-44383816 Msa0813510:intron 15.0%
!!! AATCTTTCTTTGAAATTTAT+TGG + chr5_3:44383853-44383872 None:intergenic 15.0%
!! GTAAATTAATAAGATATGTT+AGG + chr5_3:44386330-44386349 None:intergenic 15.0%
!!! ATTAGATAGTTTTTTTTTTC+CGG + chr5_3:44386540-44386559 None:intergenic 15.0%
!!! TAATGTATTTTAAATTTGGT+TGG + chr5_3:44387044-44387063 None:intergenic 15.0%
!!! GTCATAATGTATTTTAAATT+TGG + chr5_3:44387048-44387067 None:intergenic 15.0%
!!! ATAGAGTAAACAATTGTTTT+TGG - chr5_3:44383283-44383302 Msa0813510:intron 20.0%
!! TTGTAATTTCAATACATTGA+TGG - chr5_3:44383724-44383743 Msa0813510:intron 20.0%
!! TGTAATTTCAATACATTGAT+GGG - chr5_3:44383725-44383744 Msa0813510:intron 20.0%
!! GAAATTTATTGGAAGAAAAA+GGG + chr5_3:44383842-44383861 None:intergenic 20.0%
!! TGAAATTTATTGGAAGAAAA+AGG + chr5_3:44383843-44383862 None:intergenic 20.0%
!! CTAAAGAAATAAAGTTTAGA+GGG + chr5_3:44383914-44383933 None:intergenic 20.0%
!! AGCATAACAAAAATAAACTA+AGG - chr5_3:44383937-44383956 Msa0813510:intron 20.0%
!! TTGTATCTAAATCTAAGTAT+AGG - chr5_3:44385379-44385398 Msa0813510:CDS 20.0%
!! TGTATCTAAATCTAAGTATA+GGG - chr5_3:44385380-44385399 Msa0813510:CDS 20.0%
!! ATAAGAAAATTCACATAAGT+TGG + chr5_3:44386032-44386051 None:intergenic 20.0%
!!! AATTACCTATTTTTGTTGTA+TGG + chr5_3:44387138-44387157 None:intergenic 20.0%
!!! CAATTTTCTTTCAACATTTT+AGG + chr5_3:44387185-44387204 None:intergenic 20.0%
! AAGAACAAGTTTCATAAACT+TGG - chr5_3:44382952-44382971 Msa0813510:CDS 25.0%
! ATGCTAGAAATAAGATTATC+AGG + chr5_3:44383129-44383148 None:intergenic 25.0%
! TAGAGATATGAAGAGAAAAA+AGG + chr5_3:44383185-44383204 None:intergenic 25.0%
! TATCTCTAGTGATTATGTAA+AGG - chr5_3:44383197-44383216 Msa0813510:intron 25.0%
!!! CTATAGTTCTTTCTCTTTTT+TGG - chr5_3:44383330-44383349 Msa0813510:intron 25.0%
! TAATAAGGACATGATAAAAG+AGG - chr5_3:44383698-44383717 Msa0813510:intron 25.0%
! GCTAAAGAAATAAAGTTTAG+AGG + chr5_3:44383915-44383934 None:intergenic 25.0%
! ACAAAAATAAACTAAGGTCA+TGG - chr5_3:44383943-44383962 Msa0813510:intron 25.0%
!!! TTTTGTTTATAGTTATGCAC+AGG - chr5_3:44384028-44384047 Msa0813510:intron 25.0%
! ATTGGACCTAATTCTTATAA+AGG - chr5_3:44384662-44384681 Msa0813510:intron 25.0%
! TTGGACCTAATTCTTATAAA+GGG - chr5_3:44384663-44384682 Msa0813510:intron 25.0%
! TAAGGATATTGTTAGAATTG+CGG - chr5_3:44384919-44384938 Msa0813510:CDS 25.0%
! ATCAAGTTTATGAATGATCA+TGG - chr5_3:44384959-44384978 Msa0813510:CDS 25.0%
!!! TGTCATATAAGTGTTGTTTA+AGG - chr5_3:44385475-44385494 Msa0813510:CDS 25.0%
! ACTAAAATACTCGCATTAAT+TGG - chr5_3:44385560-44385579 Msa0813510:CDS 25.0%
! TGGACTGTTTAATTAAACAA+AGG - chr5_3:44385614-44385633 Msa0813510:CDS 25.0%
!! AGTGTTAATAAGTATTGTCT+TGG - chr5_3:44385648-44385667 Msa0813510:CDS 25.0%
!! CTTTTAATCAGTGAGAATAA+GGG + chr5_3:44385763-44385782 None:intergenic 25.0%
! AGATCAAATTCTATCAAACA+TGG - chr5_3:44385791-44385810 Msa0813510:CDS 25.0%
! GATCAAATTCTATCAAACAT+GGG - chr5_3:44385792-44385811 Msa0813510:CDS 25.0%
! ATCAAATTCTATCAAACATG+GGG - chr5_3:44385793-44385812 Msa0813510:CDS 25.0%
!! AAAATTCCAGTATAGTGTTT+TGG - chr5_3:44386105-44386124 Msa0813510:intron 25.0%
!!! ATCTCTTTTTTATGCTCTTA+TGG - chr5_3:44386135-44386154 Msa0813510:intron 25.0%
! TGTATAAAAATATACACGAG+TGG + chr5_3:44386403-44386422 None:intergenic 25.0%
!! TACCAGAATTAATTTGAGAA+TGG - chr5_3:44386450-44386469 Msa0813510:intron 25.0%
! CCAAAAACTATATGGTTATT+TGG + chr5_3:44386632-44386651 None:intergenic 25.0%
!! CCAAATAACCATATAGTTTT+TGG - chr5_3:44386629-44386648 Msa0813510:intron 25.0%
! ATGAGCAATGTTTATAGTTA+TGG - chr5_3:44386904-44386923 Msa0813510:CDS 25.0%
! AATACATTATGACAAAATGC+TGG - chr5_3:44387055-44387074 Msa0813510:CDS 25.0%
! TTCTTCTAAGAAACTTGCTT+GGG - chr5_3:44383056-44383075 Msa0813510:CDS 30.0%
TAGAATCAAGTTCAATTCCT+AGG + chr5_3:44383429-44383448 None:intergenic 30.0%
!! AATACATTGATGGGTTATAG+TGG - chr5_3:44383734-44383753 Msa0813510:intron 30.0%
!!! ATTTTGATTCAACAAGAGAG+TGG - chr5_3:44384125-44384144 Msa0813510:intron 30.0%
! TTTGACCAATTTTTCATGAC+CGG + chr5_3:44384333-44384352 None:intergenic 30.0%
TACCTCATCTTTCATTGTAT+CGG - chr5_3:44384553-44384572 Msa0813510:intron 30.0%
TGGACCTAATTCTTATAAAG+GGG - chr5_3:44384664-44384683 Msa0813510:intron 30.0%
TAGACCCCTTTATAAGAATT+AGG + chr5_3:44384671-44384690 None:intergenic 30.0%
ATTTGTGTGGATGATAATCA+TGG - chr5_3:44384821-44384840 Msa0813510:intron 30.0%
TTTGTGTGGATGATAATCAT+GGG - chr5_3:44384822-44384841 Msa0813510:intron 30.0%
AATGCTTGTTTGGGAAATAT+GGG - chr5_3:44385034-44385053 Msa0813510:CDS 30.0%
AGTATGAAACTGATGGTTAT+AGG - chr5_3:44385095-44385114 Msa0813510:CDS 30.0%
AAAGGCAATTATGTATAGCT+AGG + chr5_3:44385215-44385234 None:intergenic 30.0%
GTATCAGATACAGTATGTAT+CGG - chr5_3:44385275-44385294 Msa0813510:CDS 30.0%
TACTAATTCTCTTATGCTCA+TGG - chr5_3:44385411-44385430 Msa0813510:CDS 30.0%
! GCTTTTAATCAGTGAGAATA+AGG + chr5_3:44385764-44385783 None:intergenic 30.0%
! ATTTTTCCTTGAACACATGT+GGG + chr5_3:44385950-44385969 None:intergenic 30.0%
! AATTTTTCCTTGAACACATG+TGG + chr5_3:44385951-44385970 None:intergenic 30.0%
!!! TTCTTGCAGATTTCCTTTTT+TGG - chr5_3:44385980-44385999 Msa0813510:intron 30.0%
GAAGAAGAAAACACCAAAAA+AGG + chr5_3:44385996-44386015 None:intergenic 30.0%
!!! ATGTCATTTTCATGTTGTAC+TGG + chr5_3:44386162-44386181 None:intergenic 30.0%
TGGTATGCATGCATTATAAA+GGG + chr5_3:44386365-44386384 None:intergenic 30.0%
ATGGTATGCATGCATTATAA+AGG + chr5_3:44386366-44386385 None:intergenic 30.0%
AGTGGTTAGTGGTTAAATAA+TGG + chr5_3:44386385-44386404 None:intergenic 30.0%
CTCCATTCTCAAATTAATTC+TGG + chr5_3:44386455-44386474 None:intergenic 30.0%
CACAACAACCAAAAACTATA+TGG + chr5_3:44386640-44386659 None:intergenic 30.0%
GTTGTTGTGCATAAATAAGT+TGG - chr5_3:44386651-44386670 Msa0813510:intron 30.0%
! TATGTAAGGACATTTTCTCT+TGG + chr5_3:44386702-44386721 None:intergenic 30.0%
ATTAAGCTGTTTATCCAAAC+AGG - chr5_3:44386789-44386808 Msa0813510:CDS 30.0%
! TTTGTCTTCTCTTCCTTTTT+GGG - chr5_3:44386832-44386851 Msa0813510:CDS 30.0%
! TATCTGTTTTCAACCCAAAA+AGG + chr5_3:44386848-44386867 None:intergenic 30.0%
CAATGTTTATAGTTATGGCA+TGG - chr5_3:44386909-44386928 Msa0813510:CDS 30.0%
ATAGTTATGGCATGGTAATT+TGG - chr5_3:44386917-44386936 Msa0813510:CDS 30.0%
TAGTTATGGCATGGTAATTT+GGG - chr5_3:44386918-44386937 Msa0813510:CDS 30.0%
CAGCAATATGGCTAAAATAT+CGG + chr5_3:44387112-44387131 None:intergenic 30.0%
TGCAACCATACAACAAAAAT+AGG - chr5_3:44387130-44387149 Msa0813510:CDS 30.0%
!!! CAACATTTTAGGTTCATCAA+AGG + chr5_3:44387174-44387193 None:intergenic 30.0%
GTTGTGATTTGAGAGAAGAA+AGG + chr5_3:44382742-44382761 None:intergenic 35.0%
TTGTTCAACTGTGTCTTCAT+CGG + chr5_3:44382836-44382855 None:intergenic 35.0%
CAAGCAAGTTTCTTAGAAGA+AGG + chr5_3:44383057-44383076 None:intergenic 35.0%
! CTTCTTCTAAGAAACTTGCT+TGG - chr5_3:44383055-44383074 Msa0813510:CDS 35.0%
AATCTTACTCAACTCTATCC+TGG - chr5_3:44383093-44383112 Msa0813510:intron 35.0%
ATTACAATTCTCTTCCTCTC+AGG - chr5_3:44383157-44383176 Msa0813510:intron 35.0%
GCAAGACTATATCTATCTTC+TGG + chr5_3:44383392-44383411 None:intergenic 35.0%
! TGCAAAAAGTTGTTTCACCT+AGG - chr5_3:44383409-44383428 Msa0813510:intron 35.0%
CTATTGAAAGATTCGTCCTT+AGG - chr5_3:44383446-44383465 Msa0813510:intron 35.0%
TGGTTAATGAGTTTCACCTA+AGG + chr5_3:44383465-44383484 None:intergenic 35.0%
TCGCTAAAGAAAGACACATT+CGG + chr5_3:44383561-44383580 None:intergenic 35.0%
TCTCAAATGTGTCTTTCCTT+GGG - chr5_3:44383588-44383607 Msa0813510:intron 35.0%
! TCCTTGGGTAATTTAGTCTT+CGG - chr5_3:44383603-44383622 Msa0813510:intron 35.0%
! TCATAGACTATACCGACTAA+CGG + chr5_3:44383670-44383689 None:intergenic 35.0%
ACAGGCTGAATTTGATATGA+AGG - chr5_3:44384046-44384065 Msa0813510:intron 35.0%
!! GTTTCTTCACATCAAGTTGA+TGG - chr5_3:44384073-44384092 Msa0813510:intron 35.0%
TCTTGTTGAATCAAAATCGC+AGG + chr5_3:44384122-44384141 None:intergenic 35.0%
TTTCTCCATTTGTAGCAAGA+GGG - chr5_3:44384250-44384269 Msa0813510:intron 35.0%
AGAAGAAAGGTTTCACCTTA+GGG - chr5_3:44384285-44384304 Msa0813510:intron 35.0%
! ACTTCAAAGCATTCTCAACT+CGG + chr5_3:44384358-44384377 None:intergenic 35.0%
! ACATTCACAGAACCCATTTT+GGG + chr5_3:44384395-44384414 None:intergenic 35.0%
GTGAATGTGAAGCTTTCATT+TGG - chr5_3:44384407-44384426 Msa0813510:intron 35.0%
AAGCTTTCATTTGGACTTTG+TGG - chr5_3:44384416-44384435 Msa0813510:intron 35.0%
AGCTTTCATTTGGACTTTGT+GGG - chr5_3:44384417-44384436 Msa0813510:intron 35.0%
GATACAATGAAAGATGAGGT+AGG + chr5_3:44384554-44384573 None:intergenic 35.0%
GTTGAGTTTACAGAACAGAT+TGG - chr5_3:44384644-44384663 Msa0813510:intron 35.0%
TTCTTATAAAGGGGTCTACA+TGG - chr5_3:44384673-44384692 Msa0813510:intron 35.0%
TCTTATAAAGGGGTCTACAT+GGG - chr5_3:44384674-44384693 Msa0813510:intron 35.0%
! AGAACTGCAGAATGTTTCTA+TGG + chr5_3:44384796-44384815 None:intergenic 35.0%
! TGATAATCATGGGTTATGTG+TGG - chr5_3:44384832-44384851 Msa0813510:CDS 35.0%
GAATGCTTGTTTGGGAAATA+TGG - chr5_3:44385033-44385052 Msa0813510:CDS 35.0%
ATGAAACTGATGGTTATAGG+TGG - chr5_3:44385098-44385117 Msa0813510:CDS 35.0%
AATGAATAGAAGCAAACCTC+AGG + chr5_3:44385130-44385149 None:intergenic 35.0%
CATCACAGTCTATGTGTTAA+AGG + chr5_3:44385233-44385252 None:intergenic 35.0%
GATACAGTATGTATCGGATA+CGG - chr5_3:44385281-44385300 Msa0813510:CDS 35.0%
CACGTCAAATCATTATTCGA+TGG + chr5_3:44385320-44385339 None:intergenic 35.0%
CATTATGAGTCAATCTTTGC+AGG + chr5_3:44385357-44385376 None:intergenic 35.0%
TGACACTTGTAATGAGACAA+AGG - chr5_3:44385717-44385736 Msa0813510:CDS 35.0%
TAAAGATCTGAACTTCCTTG+AGG + chr5_3:44385864-44385883 None:intergenic 35.0%
! TTTTATCCCACATGTGTTCA+AGG - chr5_3:44385941-44385960 Msa0813510:intron 35.0%
TGAACTAGCTAGTGTATACA+AGG + chr5_3:44386081-44386100 None:intergenic 35.0%
ATAGAGCCAAAACACTATAC+TGG + chr5_3:44386114-44386133 None:intergenic 35.0%
AGTTACTGTAAGTTTCTCTC+CGG + chr5_3:44386198-44386217 None:intergenic 35.0%
AAATATACACGAGTGGTTAG+TGG + chr5_3:44386396-44386415 None:intergenic 35.0%
TGCGAAAAAGACCATATCAA+AGG + chr5_3:44386493-44386512 None:intergenic 35.0%
GTGTGTTTGTGTGATATGTA+AGG + chr5_3:44386716-44386735 None:intergenic 35.0%
ACACCAATTCACATGAATGT+TGG - chr5_3:44386732-44386751 Msa0813510:intron 35.0%
TCACCAACATTCATGTGAAT+TGG + chr5_3:44386738-44386757 None:intergenic 35.0%
! CTTTGTCTTCTCTTCCTTTT+TGG - chr5_3:44386831-44386850 Msa0813510:CDS 35.0%
GGTTGAAAACAGATAATTGC+AGG - chr5_3:44386853-44386872 Msa0813510:CDS 35.0%
AGAATTGAGGACGTTTAGAA+GGG + chr5_3:44387089-44387108 None:intergenic 35.0%
GCTAAAATATCGGAGAATTG+AGG + chr5_3:44387102-44387121 None:intergenic 35.0%
TTGAGAGAAGAAAGGCCAAA+AGG + chr5_3:44382734-44382753 None:intergenic 40.0%
TGTTCAACTGTGTCTTCATC+GGG + chr5_3:44382835-44382854 None:intergenic 40.0%
! ATCTGTGGTGAGTTTTCATG+AGG + chr5_3:44382867-44382886 None:intergenic 40.0%
AAGAAGTAGCTTCTGATCTG+TGG + chr5_3:44382882-44382901 None:intergenic 40.0%
! CTTGTTCTTGTTGATGAGCA+TGG + chr5_3:44382941-44382960 None:intergenic 40.0%
GCAAGTTTCTTAGAAGAAGG+AGG + chr5_3:44383054-44383073 None:intergenic 40.0%
!! AGAGAAAAAAGGTACCTGAG+AGG + chr5_3:44383174-44383193 None:intergenic 40.0%
! CACTCTGAGCTCTAATAATC+CGG - chr5_3:44383359-44383378 Msa0813510:intron 40.0%
! AGCTCTAATAATCCGGAGTT+TGG - chr5_3:44383366-44383385 Msa0813510:intron 40.0%
ACCACATGAGTTCATTCACT+TGG - chr5_3:44383481-44383500 Msa0813510:intron 40.0%
ACCAAGTGAATGAACTCATG+TGG + chr5_3:44383485-44383504 None:intergenic 40.0%
CTCTCAAATGTGTCTTTCCT+TGG - chr5_3:44383587-44383606 Msa0813510:intron 40.0%
TCCGAAGACTAAATTACCCA+AGG + chr5_3:44383607-44383626 None:intergenic 40.0%
CGAATGTTTCTTCCGTTAGT+CGG - chr5_3:44383655-44383674 Msa0813510:intron 40.0%
!! TCACATCAAGTTGATGGAAC+AGG - chr5_3:44384079-44384098 Msa0813510:intron 40.0%
TTGATTCAACAAGAGAGTGG+TGG - chr5_3:44384128-44384147 Msa0813510:intron 40.0%
GTTTCTCCATTTGTAGCAAG+AGG - chr5_3:44384249-44384268 Msa0813510:intron 40.0%
! GCACAGATCTTTGAGAAGAA+AGG - chr5_3:44384272-44384291 Msa0813510:intron 40.0%
GAGAAGAAAGGTTTCACCTT+AGG - chr5_3:44384284-44384303 Msa0813510:intron 40.0%
GAAGAAAGGTTTCACCTTAG+GGG - chr5_3:44384286-44384305 Msa0813510:intron 40.0%
TACAAGAAGAACAACCCCTA+AGG + chr5_3:44384303-44384322 None:intergenic 40.0%
GGGTTGTTCTTCTTGTAGTT+AGG - chr5_3:44384306-44384325 Msa0813510:intron 40.0%
GTTCTTCTTGTAGTTAGGTC+CGG - chr5_3:44384311-44384330 Msa0813510:intron 40.0%
TAGGTCCGGTCATGAAAAAT+TGG - chr5_3:44384325-44384344 Msa0813510:intron 40.0%
! CTTCAAAGCATTCTCAACTC+GGG + chr5_3:44384357-44384376 None:intergenic 40.0%
GCGATAAAGAAGCCCAAAAT+GGG - chr5_3:44384380-44384399 Msa0813510:intron 40.0%
! CACATTCACAGAACCCATTT+TGG + chr5_3:44384396-44384415 None:intergenic 40.0%
TGTCAGGAAGAGAGTTTCAA+GGG - chr5_3:44384440-44384459 Msa0813510:intron 40.0%
AGTTTCAAGGGGAGAGAATT+AGG - chr5_3:44384452-44384471 Msa0813510:intron 40.0%
GTTTCAAGGGGAGAGAATTA+GGG - chr5_3:44384453-44384472 Msa0813510:intron 40.0%
TTTCAAGGGGAGAGAATTAG+GGG - chr5_3:44384454-44384473 Msa0813510:intron 40.0%
! ATTGGAGAAGATAGTGGTAG+TGG - chr5_3:44384479-44384498 Msa0813510:intron 40.0%
!! AGAAGATAGTGGTAGTGGAA+AGG - chr5_3:44384484-44384503 Msa0813510:intron 40.0%
ATGAAAGATGAGGTAGGCAA+AGG + chr5_3:44384548-44384567 None:intergenic 40.0%
GACCGATACAATGAAAGATG+AGG + chr5_3:44384558-44384577 None:intergenic 40.0%
! TCATTGTATCGGTCGATGAA+TGG - chr5_3:44384564-44384583 Msa0813510:intron 40.0%
TGAATGGCAGACGATAAAGT+CGG - chr5_3:44384580-44384599 Msa0813510:intron 40.0%
! GTGGTGATGAGATTGAGAAA+TGG - chr5_3:44384603-44384622 Msa0813510:intron 40.0%
TTGGAATCGAGAAGCTGAAA+GGG - chr5_3:44384705-44384724 Msa0813510:intron 40.0%
! AAGCTGAAAGGGTGTGAAAA+AGG - chr5_3:44384716-44384735 Msa0813510:intron 40.0%
TCAGTTCCAGAAGATCTTTG+TGG + chr5_3:44384763-44384782 None:intergenic 40.0%
AGAAACATTCTGCAGTTCTG+TGG - chr5_3:44384797-44384816 Msa0813510:intron 40.0%
ATGTGTGGTGACTAAGTTCA+TGG - chr5_3:44384847-44384866 Msa0813510:CDS 40.0%
GAACAAGAAGCTTCAGAGTA+AGG - chr5_3:44384901-44384920 Msa0813510:CDS 40.0%
ACAGAGATCTTAATACGCAG+AGG - chr5_3:44384990-44385009 Msa0813510:CDS 40.0%
AGGATTCTGTTAGATAGGCA+TGG - chr5_3:44385010-44385029 Msa0813510:CDS 40.0%
GGATTCTGTTAGATAGGCAT+GGG - chr5_3:44385011-44385030 Msa0813510:CDS 40.0%
GCAATGGAGTATGAAACTGA+TGG - chr5_3:44385088-44385107 Msa0813510:CDS 40.0%
AAAGTAGCAGTTGTGAAGTG+AGG - chr5_3:44385591-44385610 Msa0813510:CDS 40.0%
CTTGTAATGAGACAAAGGAG+CGG - chr5_3:44385722-44385741 Msa0813510:CDS 40.0%
CATGCTCAAACAATGATGTC+AGG + chr5_3:44386307-44386326 None:intergenic 40.0%
TATCAAAGGCTTGAGACATG+CGG + chr5_3:44386479-44386498 None:intergenic 40.0%
CATGTCTCAAGCCTTTGATA+TGG - chr5_3:44386479-44386498 Msa0813510:intron 40.0%
ATAGTTATTTGTGCGCAGAC+CGG - chr5_3:44386518-44386537 Msa0813510:intron 40.0%
CAAAGAGTTAGCACGAACTA+GGG + chr5_3:44386816-44386835 None:intergenic 40.0%
ACAAAGAGTTAGCACGAACT+AGG + chr5_3:44386817-44386836 None:intergenic 40.0%
GTAATTTGGGAGATGGTTAG+TGG - chr5_3:44386931-44386950 Msa0813510:CDS 40.0%
AAATTTGGTTGGCAGTCCTT+GGG + chr5_3:44387033-44387052 None:intergenic 40.0%
TAAATTTGGTTGGCAGTCCT+TGG + chr5_3:44387034-44387053 None:intergenic 40.0%
GAATTGAGGACGTTTAGAAG+GGG + chr5_3:44387088-44387107 None:intergenic 40.0%
GAGAATTGAGGACGTTTAGA+AGG + chr5_3:44387090-44387109 None:intergenic 40.0%
GTTGTATGGTTGCAGCAATA+TGG + chr5_3:44387124-44387143 None:intergenic 40.0%
AAGAAAGGCCAAAAGGTGGT+GGG + chr5_3:44382727-44382746 None:intergenic 45.0%
AGAGAAGAAAGGCCAAAAGG+TGG + chr5_3:44382731-44382750 None:intergenic 45.0%
ACTCCACCTCACATTTCCAA+TGG - chr5_3:44382765-44382784 Msa0813510:three_prime_UTR 45.0%
GTTCAACTGTGTCTTCATCG+GGG + chr5_3:44382834-44382853 None:intergenic 45.0%
AGCATGGAAGAGTCTTTGGA+AGG + chr5_3:44382925-44382944 None:intergenic 45.0%
GATGAGCATGGAAGAGTCTT+TGG + chr5_3:44382929-44382948 None:intergenic 45.0%
TTAGAAGAAGGAGGAGACTC+AGG + chr5_3:44383045-44383064 None:intergenic 45.0%
TTATCAGGAAGCTGAGTTCC+AGG + chr5_3:44383114-44383133 None:intergenic 45.0%
TCTATCTTCTGGCCAAACTC+CGG + chr5_3:44383381-44383400 None:intergenic 45.0%
!! CAAGTTGATGGAACAGGCAT+TGG - chr5_3:44384085-44384104 Msa0813510:intron 45.0%
CGCGATAAAGAAGCCCAAAA+TGG - chr5_3:44384379-44384398 Msa0813510:intron 45.0%
ATTTGGACTTTGTGGGTGTC+AGG - chr5_3:44384424-44384443 Msa0813510:intron 45.0%
GTGTCAGGAAGAGAGTTTCA+AGG - chr5_3:44384439-44384458 Msa0813510:intron 45.0%
GTCAGGAAGAGAGTTTCAAG+GGG - chr5_3:44384441-44384460 Msa0813510:intron 45.0%
!! GCGTCTGAAGCTGAATCTTT+TGG + chr5_3:44384526-44384545 None:intergenic 45.0%
GAATGGCAGACGATAAAGTC+GGG - chr5_3:44384581-44384600 Msa0813510:intron 45.0%
GTTGGAATCGAGAAGCTGAA+AGG - chr5_3:44384704-44384723 Msa0813510:intron 45.0%
TGAGCTCCACAAAGATCTTC+TGG - chr5_3:44384754-44384773 Msa0813510:intron 45.0%
!! CTTCTGGAACTGATGACTTG+TGG - chr5_3:44384770-44384789 Msa0813510:intron 45.0%
GCAGTTCTGTGGTATTTGTG+TGG - chr5_3:44384808-44384827 Msa0813510:intron 45.0%
GTGGTGACTAAGTTCATGGT+AGG - chr5_3:44384851-44384870 Msa0813510:CDS 45.0%
! AATTGCGGTTGATGTAGCTG+AGG - chr5_3:44384934-44384953 Msa0813510:CDS 45.0%
! ATTGCGGTTGATGTAGCTGA+GGG - chr5_3:44384935-44384954 Msa0813510:CDS 45.0%
CGCAGAGGATTCTGTTAGAT+AGG - chr5_3:44385005-44385024 Msa0813510:CDS 45.0%
TAGGCATGGGAATGCTTGTT+TGG - chr5_3:44385024-44385043 Msa0813510:CDS 45.0%
AGGCATGGGAATGCTTGTTT+GGG - chr5_3:44385025-44385044 Msa0813510:CDS 45.0%
!! CAAGAGTGTTGGAGAAGCAA+TGG - chr5_3:44385072-44385091 Msa0813510:CDS 45.0%
TGACATGCTTGTAGTTGAGC+CGG - chr5_3:44386176-44386195 Msa0813510:intron 45.0%
ATCAAAGGCTTGAGACATGC+GGG + chr5_3:44386478-44386497 None:intergenic 45.0%
ATGTCTCTGTCACGCTTTCA+GGG + chr5_3:44386882-44386901 None:intergenic 45.0%
TGGCATGGTAATTTGGGAGA+TGG - chr5_3:44386924-44386943 Msa0813510:CDS 45.0%
GAAGAAAGGCCAAAAGGTGG+TGG + chr5_3:44382728-44382747 None:intergenic 50.0%
TGGAAATGTGAGGTGGAGTG+TGG + chr5_3:44382764-44382783 None:intergenic 50.0%
CAGCCATTGGAAATGTGAGG+TGG + chr5_3:44382771-44382790 None:intergenic 50.0%
CTGCAGCCATTGGAAATGTG+AGG + chr5_3:44382774-44382793 None:intergenic 50.0%
ATAGTGGTTGTGGTGCGAGT+TGG + chr5_3:44382811-44382830 None:intergenic 50.0%
! TTCATCGGGGATAGTGGTTG+TGG + chr5_3:44382821-44382840 None:intergenic 50.0%
TGTGTCTTCATCGGGGATAG+TGG + chr5_3:44382827-44382846 None:intergenic 50.0%
CAAGAGAGTGGTGGTCATGA+TGG - chr5_3:44384137-44384156 Msa0813510:intron 50.0%
! TGGTCATGATGGTGAGGTTC+AGG - chr5_3:44384148-44384167 Msa0813510:intron 50.0%
ATGGTGAGGTTCAGGCTCAA+GGG - chr5_3:44384156-44384175 Msa0813510:intron 50.0%
CGTTTCATGGCCTGCAATGT+CGG - chr5_3:44384214-44384233 Msa0813510:intron 50.0%
CTGTGCCCTCTTGCTACAAA+TGG + chr5_3:44384258-44384277 None:intergenic 50.0%
GGGAGAGAATTAGGGGAGAT+TGG - chr5_3:44384461-44384480 Msa0813510:intron 50.0%
GGGGAGATTGGAGAAGATAG+TGG - chr5_3:44384473-44384492 Msa0813510:intron 50.0%
AAGGGGTCTACATGGGCAAA+AGG - chr5_3:44384681-44384700 Msa0813510:intron 50.0%
AGGGGTCTACATGGGCAAAA+GGG - chr5_3:44384682-44384701 Msa0813510:intron 50.0%
GTCTACATGGGCAAAAGGGT+TGG - chr5_3:44384686-44384705 Msa0813510:intron 50.0%
! TTGCGGTTGATGTAGCTGAG+GGG - chr5_3:44384936-44384955 Msa0813510:CDS 50.0%
TGCTTCTCCAACACTCTTGC+AGG + chr5_3:44385071-44385090 None:intergenic 50.0%
!! TTATAGGTGGCTTGCTCCTG+AGG - chr5_3:44385111-44385130 Msa0813510:CDS 50.0%
GAGTCAATCTTTGCAGGCAG+TGG + chr5_3:44385351-44385370 None:intergenic 50.0%
GTAGCAGTTGTGAAGTGAGG+TGG - chr5_3:44385594-44385613 Msa0813510:CDS 50.0%
CCTTGAGGAGAACGCTAAGT+TGG + chr5_3:44385849-44385868 None:intergenic 50.0%
CCAACTTAGCGTTCTCCTCA+AGG - chr5_3:44385846-44385865 Msa0813510:CDS 50.0%
GATGTCTCTGTCACGCTTTC+AGG + chr5_3:44386883-44386902 None:intergenic 50.0%
TTGGGAGATGGTTAGTGGTG+AGG - chr5_3:44386936-44386955 Msa0813510:CDS 50.0%
TTCTGCACTTTCTCCTGTGC+AGG - chr5_3:44386966-44386985 Msa0813510:CDS 50.0%
! AACTTCAGGTCTAAGGCCAC+AGG + chr5_3:44387010-44387029 None:intergenic 50.0%
CCTTGGGAACTTCAGGTCTA+AGG + chr5_3:44387017-44387036 None:intergenic 50.0%
CCTTAGACCTGAAGTTCCCA+AGG - chr5_3:44387014-44387033 Msa0813510:CDS 50.0%
!! AAGGTGGTGGGTGGTAGTGT+GGG + chr5_3:44382715-44382734 None:intergenic 55.0%
!! AAAGGTGGTGGGTGGTAGTG+TGG + chr5_3:44382716-44382735 None:intergenic 55.0%
! CACTACCACCCACCACCTTT+TGG - chr5_3:44382716-44382735 Msa0813510:three_prime_UTR 55.0%
!! AAAGGCCAAAAGGTGGTGGG+TGG + chr5_3:44382724-44382743 None:intergenic 55.0%
!! CACTCTAAGGCTGCAGCCAT+TGG + chr5_3:44382784-44382803 None:intergenic 55.0%
TGGCTGCAGCCTTAGAGTGT+TGG - chr5_3:44382785-44382804 Msa0813510:exon 55.0%
! GCGAGTTGGCCAACACTCTA+AGG + chr5_3:44382797-44382816 None:intergenic 55.0%
! GAGTGGTGGTCATGATGGTG+AGG - chr5_3:44384142-44384161 Msa0813510:intron 55.0%
GATGGTGAGGTTCAGGCTCA+AGG - chr5_3:44384155-44384174 Msa0813510:intron 55.0%
CTTGCAACGCGCTCGTTTCA+TGG - chr5_3:44384201-44384220 Msa0813510:intron 55.0%
TCCAACGCAACCGACATTGC+AGG + chr5_3:44384227-44384246 None:intergenic 55.0%
TGGCAGACGATAAAGTCGGG+TGG - chr5_3:44384584-44384603 Msa0813510:intron 55.0%
! GTCACTGCCTGCAAGAGTGT+TGG - chr5_3:44385061-44385080 Msa0813510:CDS 55.0%
GCACGAACTAGGGTCCTGTT+TGG + chr5_3:44386806-44386825 None:intergenic 55.0%
TGGCAGTCCTTGGGAACTTC+AGG + chr5_3:44387024-44387043 None:intergenic 55.0%
!! AGGTGGTGGGTGGTAGTGTG+GGG + chr5_3:44382714-44382733 None:intergenic 60.0%
! GCCTGCAATGTCGGTTGCGT+TGG - chr5_3:44384223-44384242 Msa0813510:intron 60.0%
TCTCCTGTGCAGGCAGCAGT+TGG - chr5_3:44386976-44386995 Msa0813510:CDS 60.0%
ATGCCAACTGCTGCCTGCAC+AGG + chr5_3:44386982-44387001 None:intergenic 60.0%
GCAGTTGGCATTGCAGCCTG+TGG - chr5_3:44386991-44387010 Msa0813510:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 44382686 44387271 44382686 ID=Msa0813510;Name=Msa0813510
chr5_3 mRNA 44382686 44387271 44382686 ID=Msa0813510-mRNA-1;Parent=Msa0813510;Name=Msa0813510-mRNA-1;_AED=0.08;_eAED=0.08;_QI=98|1|1|1|1|1|3|116|592
chr5_3 exon 44382686 44383092 44382686 ID=Msa0813510-mRNA-1:exon:13678;Parent=Msa0813510-mRNA-1
chr5_3 exon 44384825 44385917 44384825 ID=Msa0813510-mRNA-1:exon:13677;Parent=Msa0813510-mRNA-1
chr5_3 exon 44386779 44387271 44386779 ID=Msa0813510-mRNA-1:exon:13676;Parent=Msa0813510-mRNA-1
chr5_3 five_prime_UTR 44387174 44387271 44387174 ID=Msa0813510-mRNA-1:five_prime_utr;Parent=Msa0813510-mRNA-1
chr5_3 CDS 44386779 44387173 44386779 ID=Msa0813510-mRNA-1:cds;Parent=Msa0813510-mRNA-1
chr5_3 CDS 44384825 44385917 44384825 ID=Msa0813510-mRNA-1:cds;Parent=Msa0813510-mRNA-1
chr5_3 CDS 44382802 44383092 44382802 ID=Msa0813510-mRNA-1:cds;Parent=Msa0813510-mRNA-1
chr5_3 three_prime_UTR 44382686 44382801 44382686 ID=Msa0813510-mRNA-1:three_prime_utr;Parent=Msa0813510-mRNA-1
Gene Sequence

>Msa0813510

ATGGCTGCAGCCTTAGAGTGTTGGCCAACTCGCACCACAACCACTATCCCCGATGAAGACACAGTTGAACAACAACAAGTCCTCATGAAAACTCACCACAGATCAGAAGCTACTTCTTCTTCTTCTTCTCTTTCTCTTCCTTCCAAAGACTCTTCCATGCTCATCAACAAGAACAAGTTTCATAAACTTGGTCGTAATCTTTCTGATGCAATCACATCTTTCAAAAACACACTCAACCTTAATAATAATAGTAACAATCCTGAGTCTCCTCCTTCTTCTAAGAAACTTGCTTGGGCTTCTGTTCTTCGTAATCTTACTCAACTCTATCCTGGAACTCAGCTTCCTGATAATCTTATTTCTAGCATTCGTAATCATTACAATTCTCTTCCTCTCAGTTATGCACAGGCTGAATTTGATATGAAGGATGTGTTTCTTCACATCAAGTTGATGGAACAGGCATTGGAGAGTGATCAGCCTGCGATTTTGATTCAACAAGAGAGTGGTGGTCATGATGGTGAGGTTCAGGCTCAAGGGTCTGTTTTGAAGCTCAATTTTGCTTGCAACGCGCTCGTTTCATGGCCTGCAATGTCGGTTGCGTTGGATAGTTTCTCCATTTGTAGCAAGAGGGCACAGATCTTTGAGAAGAAAGGTTTCACCTTAGGGGTTGTTCTTCTTGTAGTTAGGTCCGGTCATGAAAAATTGGTCAAAACCCGAGTTGAGAATGCTTTGAAGTTCGCGATAAAGAAGCCCAAAATGGGTTCTGTGAATGTGAAGCTTTCATTTGGACTTTGTGGGTGTCAGGAAGAGAGTTTCAAGGGGAGAGAATTAGGGGAGATTGGAGAAGATAGTGGTAGTGGAAAGGAGTTTGAGAATTCTAGCCAAAAGATTCAGCTTCAGACGCCTTTGCCTACCTCATCTTTCATTGTATCGGTCGATGAATGGCAGACGATAAAGTCGGGTGGTGATGAGATTGAGAAATGGTTATTGAATGCTGATTATGTTGAGTTTACAGAACAGATTGGACCTAATTCTTATAAAGGGGTCTACATGGGCAAAAGGGTTGGAATCGAGAAGCTGAAAGGGTGTGAAAAAGGAAATGCTTACGAGTTTGAGCTCCACAAAGATCTTCTGGAACTGATGACTTGTGGCCATAGAAACATTCTGCAGTTCTGTGGTATTTGTGTGGATGATAATCATGGGTTATGTGTGGTGACTAAGTTCATGGTAGGTAGATCTGTACACGACTTAATGTTAAAGAACAAGAAGCTTCAGAGTAAGGATATTGTTAGAATTGCGGTTGATGTAGCTGAGGGGATCAAGTTTATGAATGATCATGGTGTTGCATACAGAGATCTTAATACGCAGAGGATTCTGTTAGATAGGCATGGGAATGCTTGTTTGGGAAATATGGGTGTTGTCACTGCCTGCAAGAGTGTTGGAGAAGCAATGGAGTATGAAACTGATGGTTATAGGTGGCTTGCTCCTGAGATAATTGCAGGAGACCCTGAAAGCGTGACAGAGACATCGATGAGCAATGTTTATAGTTATGGCATGGTAATTTGGGAGATGGTTAGTGGTGAGGCAGCATATTCTGCACTTTCTCCTGTGCAGGCAGCAGTTGGCATTGCAGCCTGTGGCCTTAGACCTGAAGTTCCCAAGGACTGCCAACCAAATTTAAAATACATTATGACAAAATGCTGGAACAATACCCCTTCTAAACGTCCTCAATTCTCCGATATTTTAGCCATATTGCTGCAACCATACAACAAAAATAGGTAA
Protein sequence

>Msa0813510

MAAALECWPTRTTTTIPDEDTVEQQQVLMKTHHRSEATSSSSSLSLPSKDSSMLINKNKFHKLGRNLSDAITSFKNTLNLNNNSNNPESPPSSKKLAWASVLRNLTQLYPGTQLPDNLISSIRNHYNSLPLSYAQAEFDMKDVFLHIKLMEQALESDQPAILIQQESGGHDGEVQAQGSVLKLNFACNALVSWPAMSVALDSFSICSKRAQIFEKKGFTLGVVLLVVRSGHEKLVKTRVENALKFAIKKPKMGSVNVKLSFGLCGCQEESFKGRELGEIGEDSGSGKEFENSSQKIQLQTPLPTSSFIVSVDEWQTIKSGGDEIEKWLLNADYVEFTEQIGPNSYKGVYMGKRVGIEKLKGCEKGNAYEFELHKDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMVGRSVHDLMLKNKKLQSKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGNMGVVTACKSVGEAMEYETDGYRWLAPEIIAGDPESVTETSMSNVYSYGMVIWEMVSGEAAYSALSPVQAAVGIAACGLRPEVPKDCQPNLKYIMTKCWNNTPSKRPQFSDILAILLQPYNKNR*