AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0735520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0735520 MtrunA17_Chr5g0432751 99.209 506 4 0 1 506 1 506 0.0 1037
Msa0735520 MtrunA17_Chr1g0210091 66.738 466 147 4 42 503 74 535 0.0 656
Msa0735520 MtrunA17_Chr7g0255531 33.138 513 312 10 3 504 4 496 3.75e-85 271
Msa0735520 MtrunA17_Chr3g0116681 33.267 502 311 12 13 506 20 505 1.83e-79 257
Msa0735520 MtrunA17_Chr3g0116741 30.664 512 318 13 9 506 28 516 4.87e-78 253
Msa0735520 MtrunA17_Chr4g0058281 30.994 513 314 14 10 506 26 514 1.34e-75 247
Msa0735520 MtrunA17_Chr3g0101571 30.435 483 310 10 32 506 35 499 5.35e-75 245
Msa0735520 MtrunA17_Chr4g0047661 30.285 492 317 8 9 487 23 501 6.61e-75 245
Msa0735520 MtrunA17_Chr4g0047631 33.043 460 285 10 33 484 49 493 1.68e-74 244
Msa0735520 MtrunA17_Chr5g0445421 31.398 465 272 11 32 487 111 537 5.91e-74 244
Msa0735520 MtrunA17_Chr5g0431641 30.754 491 307 13 9 487 15 484 8.49e-74 242
Msa0735520 MtrunA17_Chr8g0356001 33.409 443 280 9 32 470 40 471 1.96e-73 241
Msa0735520 MtrunA17_Chr3g0101581 31.250 464 300 9 24 481 28 478 5.24e-73 240
Msa0735520 MtrunA17_Chr2g0310391 30.208 480 324 8 11 487 6 477 6.96e-73 239
Msa0735520 MtrunA17_Chr5g0403321 30.337 445 298 5 31 469 32 470 9.69e-73 239
Msa0735520 MtrunA17_Chr5g0395321 32.143 476 297 10 1 470 7 462 1.02e-72 240
Msa0735520 MtrunA17_Chr5g0445461 32.558 473 277 15 32 487 37 484 2.39e-72 238
Msa0735520 MtrunA17_Chr5g0445381 30.143 491 314 11 9 487 42 515 9.06e-72 237
Msa0735520 MtrunA17_Chr5g0445441 30.426 470 291 12 32 487 78 525 1.03e-71 237
Msa0735520 MtrunA17_Chr4g0047691 31.965 463 292 10 33 487 52 499 1.13e-71 237
Msa0735520 MtrunA17_Chr5g0405001 32.797 497 286 16 29 503 40 510 1.40e-71 236
Msa0735520 MtrunA17_Chr4g0058231 32.271 502 311 14 3 492 2 486 1.46e-71 236
Msa0735520 MtrunA17_Chr5g0401691 30.642 483 313 10 10 487 26 491 2.03e-71 236
Msa0735520 MtrunA17_Chr6g0484811 32.079 505 317 14 9 503 14 502 3.66e-71 235
Msa0735520 MtrunA17_Chr4g0047641 30.612 490 312 10 10 487 27 500 6.41e-71 234
Msa0735520 MtrunA17_Chr2g0310381 30.208 480 324 8 11 487 6 477 1.05e-70 233
Msa0735520 MtrunA17_Chr3g0101731 29.051 506 319 10 1 487 1 485 1.20e-70 234
Msa0735520 MtrunA17_Chr1g0174441 30.526 475 307 11 10 470 29 494 1.22e-70 234
Msa0735520 MtrunA17_Chr5g0445451 30.687 466 295 11 32 487 37 484 1.28e-70 233
Msa0735520 MtrunA17_Chr1g0174461 29.387 473 314 7 10 471 10 473 3.20e-70 233
Msa0735520 MtrunA17_Chr5g0445531 29.957 464 298 11 33 487 38 483 4.21e-70 232
Msa0735520 MtrunA17_Chr5g0431671 29.936 471 291 11 33 487 38 485 7.97e-70 231
Msa0735520 MtrunA17_Chr4g0058191 31.087 460 303 8 36 492 28 476 9.34e-70 231
Msa0735520 MtrunA17_Chr5g0395381 30.655 473 283 8 1 470 7 437 9.54e-70 230
Msa0735520 MtrunA17_Chr3g0101611 32.366 448 278 12 32 470 37 468 1.62e-68 228
Msa0735520 MtrunA17_Chr6g0463801 30.258 466 295 10 33 488 37 482 2.10e-68 228
Msa0735520 MtrunA17_Chr5g0395331 31.878 458 286 10 24 470 27 469 2.41e-68 228
Msa0735520 MtrunA17_Chr4g0035921 31.262 515 318 11 9 503 12 510 4.73e-68 227
Msa0735520 MtrunA17_Chr5g0403331 30.684 453 283 9 31 469 33 468 7.01e-68 226
Msa0735520 MtrunA17_Chr8g0382901 30.785 484 310 11 27 503 486 951 8.98e-68 234
Msa0735520 MtrunA17_Chr8g0382901 28.364 483 308 11 27 503 22 472 8.21e-61 215
Msa0735520 MtrunA17_Chr4g0011901 31.808 459 288 8 34 482 30 473 1.23e-67 225
Msa0735520 MtrunA17_Chr8g0344151 29.540 457 308 8 30 481 33 480 2.69e-67 225
Msa0735520 MtrunA17_Chr1g0198191 27.237 503 345 8 9 502 21 511 2.83e-67 225
Msa0735520 MtrunA17_Chr4g0057001 31.947 457 300 7 33 487 50 497 3.28e-67 225
Msa0735520 MtrunA17_Chr3g0101671 28.210 514 336 9 9 501 10 511 5.10e-67 224
Msa0735520 MtrunA17_Chr4g0058261 30.328 488 306 14 35 506 64 533 6.76e-67 224
Msa0735520 MtrunA17_Chr5g0401681 31.275 502 302 15 1 487 1 474 7.54e-67 223
Msa0735520 MtrunA17_Chr3g0101631 30.454 463 304 8 10 470 15 461 9.58e-67 223
Msa0735520 MtrunA17_Chr8g0372251 33.267 502 287 18 24 503 27 502 1.61e-66 223
Msa0735520 MtrunA17_Chr8g0355961 32.127 442 287 7 32 470 40 471 1.88e-66 223
Msa0735520 MtrunA17_Chr1g0160851 29.449 472 307 10 9 470 7 462 2.15e-66 222
Msa0735520 MtrunA17_Chr5g0403351 28.452 478 313 11 24 487 25 487 2.87e-66 222
Msa0735520 MtrunA17_Chr4g0058201 29.792 480 315 8 29 501 24 488 1.05e-65 220
Msa0735520 MtrunA17_Chr3g0101721 28.747 487 312 8 31 503 35 500 1.20e-65 221
Msa0735520 MtrunA17_Chr7g0254641 30.103 485 327 9 29 504 33 514 1.44e-65 221
Msa0735520 MtrunA17_Chr8g0361471 29.006 493 305 10 33 500 34 506 2.39e-65 219
Msa0735520 MtrunA17_Chr5g0431501 29.814 483 315 10 33 504 33 502 3.34e-65 219
Msa0735520 MtrunA17_Chr5g0431461 29.814 483 315 10 33 504 33 502 3.34e-65 219
Msa0735520 MtrunA17_Chr3g0086691 32.569 436 280 9 42 469 41 470 3.73e-65 219
Msa0735520 MtrunA17_Chr4g0039901 29.111 450 299 7 26 469 28 463 4.57e-65 219
Msa0735520 MtrunA17_Chr1g0176831 29.228 479 310 12 4 470 31 492 5.67e-65 219
Msa0735520 MtrunA17_Chr3g0086661 31.746 441 279 9 42 470 41 471 8.18e-65 218
Msa0735520 MtrunA17_Chr3g0094171 29.892 465 305 8 32 487 39 491 8.78e-65 218
Msa0735520 MtrunA17_Chr6g0484841 30.849 483 310 11 32 505 36 503 1.31e-64 218
Msa0735520 MtrunA17_Chr5g0446161 28.629 496 314 13 10 487 11 484 1.43e-64 218
Msa0735520 MtrunA17_Chr7g0246221 30.233 473 306 9 10 470 8 468 2.14e-64 217
Msa0735520 MtrunA17_Chr1g0162811 29.630 513 318 15 9 503 10 497 2.29e-64 217
Msa0735520 MtrunA17_Chr4g0024771 28.041 485 296 11 9 470 11 465 2.69e-64 217
Msa0735520 MtrunA17_Chr2g0314731 28.184 479 322 8 10 481 10 473 2.91e-64 216
Msa0735520 MtrunA17_Chr1g0174451 28.571 490 328 8 10 487 10 489 5.51e-64 216
Msa0735520 MtrunA17_Chr7g0258221 29.424 486 328 9 10 487 10 488 1.19e-63 215
Msa0735520 MtrunA17_Chr6g0466331 28.252 492 310 10 33 500 34 506 1.71e-63 215
Msa0735520 MtrunA17_Chr6g0472311 30.061 489 311 12 34 504 42 517 2.34e-63 214
Msa0735520 MtrunA17_Chr6g0465511 28.252 492 310 10 33 500 34 506 2.38e-63 214
Msa0735520 MtrunA17_Chr1g0205361 28.632 468 311 10 10 470 11 462 3.39e-63 214
Msa0735520 MtrunA17_Chr4g0030701 30.837 454 285 10 34 470 36 477 3.44e-63 214
Msa0735520 MtrunA17_Chr3g0086651 31.293 441 281 9 42 470 41 471 4.28e-63 214
Msa0735520 MtrunA17_Chr3g0101601 29.835 486 314 10 11 487 14 481 5.10e-63 213
Msa0735520 MtrunA17_Chr3g0084921 29.645 479 309 11 9 470 9 476 5.97e-63 213
Msa0735520 MtrunA17_Chr5g0446151 29.336 467 296 11 33 487 41 485 1.00e-62 213
Msa0735520 MtrunA17_Chr8g0344181 28.884 457 311 9 30 481 35 482 1.08e-62 213
Msa0735520 MtrunA17_Chr4g0020041 28.343 501 313 14 9 487 10 486 1.22e-62 213
Msa0735520 MtrunA17_Chr4g0076161 28.903 474 311 10 25 487 29 487 1.49e-62 212
Msa0735520 MtrunA17_Chr5g0430131 31.236 461 299 9 34 487 38 487 1.83e-62 212
Msa0735520 MtrunA17_Chr4g0052851 31.778 450 277 13 26 470 25 449 1.93e-62 211
Msa0735520 MtrunA17_Chr3g0101751 30.498 482 309 9 19 487 24 492 2.17e-62 212
Msa0735520 MtrunA17_Chr4g0011921 30.769 494 311 11 9 487 3 480 4.06e-62 211
Msa0735520 MtrunA17_Chr1g0174481 27.742 465 324 9 10 469 9 466 6.78e-62 210
Msa0735520 MtrunA17_Chr6g0463791 28.884 457 295 10 25 470 27 464 1.57e-61 209
Msa0735520 MtrunA17_Chr3g0101811 26.901 513 334 11 3 487 1 500 1.58e-61 210
Msa0735520 MtrunA17_Chr1g0156101 28.782 476 305 10 34 487 33 496 1.68e-61 209
Msa0735520 MtrunA17_Chr4g0061381 30.689 479 299 11 42 504 40 501 2.01e-61 209
Msa0735520 MtrunA17_Chr1g0162801 30.000 500 319 9 1 487 6 487 2.28e-61 209
Msa0735520 MtrunA17_Chr4g0039391 33.406 461 279 12 55 504 56 499 2.33e-61 209
Msa0735520 MtrunA17_Chr1g0205371 30.380 474 299 11 12 470 6 463 2.56e-61 209
Msa0735520 MtrunA17_Chr1g0174471 28.337 487 329 10 10 485 25 502 2.79e-61 209
Msa0735520 MtrunA17_Chr5g0431511 28.665 457 297 9 33 476 33 473 2.83e-61 209
Msa0735520 MtrunA17_Chr3g0101621 28.986 483 325 9 1 481 1 467 4.54e-61 208
Msa0735520 MtrunA17_Chr3g0101801 27.376 526 344 9 1 506 1 508 5.85e-61 208
Msa0735520 MtrunA17_Chr8g0344191 27.824 478 332 8 9 481 45 514 6.25e-61 209
Msa0735520 MtrunA17_Chr3g0101651 28.043 460 304 7 33 481 38 481 6.39e-61 208
Msa0735520 MtrunA17_Chr4g0011961 30.346 491 297 11 10 481 7 471 1.06e-60 207
Msa0735520 MtrunA17_Chr3g0101821 29.541 501 323 11 1 487 1 485 1.26e-60 207
Msa0735520 MtrunA17_Chr3g0101661 27.553 519 331 13 9 506 10 504 1.59e-60 207
Msa0735520 MtrunA17_Chr8g0357421 29.259 499 324 10 4 487 1 485 1.63e-60 207
Msa0735520 MtrunA17_Chr3g0101711 26.731 520 334 13 9 506 10 504 2.89e-60 206
Msa0735520 MtrunA17_Chr7g0265611 30.501 459 294 9 24 470 37 482 3.03e-60 206
Msa0735520 MtrunA17_Chr1g0164211 29.581 453 282 12 32 470 30 459 3.23e-60 206
Msa0735520 MtrunA17_Chr8g0390881 29.981 517 317 17 11 503 6 501 3.75e-60 206
Msa0735520 MtrunA17_Chr3g0101691 29.283 502 310 15 9 487 10 489 4.75e-60 206
Msa0735520 MtrunA17_Chr8g0357431 29.459 499 324 8 4 487 1 486 5.28e-60 206
Msa0735520 MtrunA17_Chr2g0314721 27.893 484 321 11 9 480 16 483 5.35e-60 205
Msa0735520 MtrunA17_Chr7g0235551 29.328 491 322 14 10 486 11 490 7.54e-60 205
Msa0735520 MtrunA17_Chr7g0218611 29.200 500 308 11 24 502 24 498 9.30e-60 204
Msa0735520 MtrunA17_Chr2g0296661 31.920 448 269 14 55 487 53 479 1.06e-59 204
Msa0735520 MtrunA17_Chr5g0419691 30.519 462 302 8 34 487 30 480 1.40e-59 204
Msa0735520 MtrunA17_Chr3g0101761 29.039 489 317 8 1 476 1 472 1.83e-59 204
Msa0735520 MtrunA17_Chr4g0011871 30.519 462 303 7 34 487 30 481 1.92e-59 204
Msa0735520 MtrunA17_Chr3g0101701 28.172 465 297 10 33 481 38 481 2.67e-59 204
Msa0735520 MtrunA17_Chr4g0011981 31.155 459 295 8 34 483 30 476 4.46e-59 202
Msa0735520 MtrunA17_Chr3g0094231 30.217 460 297 10 26 476 29 473 1.12e-58 202
Msa0735520 MtrunA17_Chr5g0430091 28.694 467 308 11 32 487 36 488 2.22e-58 201
Msa0735520 MtrunA17_Chr3g0101831 29.796 490 315 11 13 487 11 486 4.26e-58 200
Msa0735520 MtrunA17_Chr1g0200961 30.159 504 308 12 5 487 1 481 1.21e-57 199
Msa0735520 MtrunA17_Chr4g0053621 29.839 496 303 15 9 487 11 478 1.32e-57 199
Msa0735520 MtrunA17_Chr8g0339331 29.106 481 325 10 34 504 39 513 1.34e-57 199
Msa0735520 MtrunA17_Chr1g0167321 29.532 491 321 9 9 487 7 484 1.35e-57 199
Msa0735520 MtrunA17_Chr7g0246151 28.276 435 292 10 44 470 45 467 1.56e-57 199
Msa0735520 MtrunA17_Chr7g0246121 29.724 434 285 6 44 470 45 465 1.56e-57 199
Msa0735520 MtrunA17_Chr4g0056951 29.890 455 299 9 55 503 65 505 2.23e-57 199
Msa0735520 MtrunA17_Chr2g0280261 29.979 477 297 11 28 487 22 478 2.78e-57 198
Msa0735520 MtrunA17_Chr5g0430031 29.051 506 324 16 9 496 8 496 3.08e-57 198
Msa0735520 MtrunA17_Chr6g0451691 28.480 467 309 10 41 487 49 510 3.27e-57 199
Msa0735520 MtrunA17_Chr4g0030711 30.330 455 291 12 53 487 56 504 4.52e-57 198
Msa0735520 MtrunA17_Chr1g0207841 31.163 430 277 10 53 470 57 479 6.24e-57 197
Msa0735520 MtrunA17_Chr4g0052861 27.823 496 321 13 5 487 3 474 2.07e-56 196
Msa0735520 MtrunA17_Chr4g0046631 28.800 500 330 10 4 487 12 501 2.91e-56 196
Msa0735520 MtrunA17_Chr7g0246131 29.314 481 307 8 8 470 4 469 3.00e-56 195
Msa0735520 MtrunA17_Chr7g0224551 28.180 511 319 16 6 487 1 492 3.17e-56 196
Msa0735520 MtrunA17_Chr2g0296651 28.715 498 311 11 5 486 4 473 6.46e-56 194
Msa0735520 MtrunA17_Chr8g0362481 28.774 424 288 9 71 487 3 419 8.42e-56 192
Msa0735520 MtrunA17_Chr4g0074581 27.419 496 334 11 24 505 60 543 1.34e-55 194
Msa0735520 MtrunA17_Chr2g0304871 29.545 484 324 9 32 504 36 513 1.58e-55 194
Msa0735520 MtrunA17_Chr5g0430081 27.968 497 333 12 5 487 1 486 1.90e-55 193
Msa0735520 MtrunA17_Chr6g0451741 27.253 466 317 9 41 488 68 529 1.93e-55 194
Msa0735520 MtrunA17_Chr7g0224561 28.571 511 317 16 6 487 1 492 2.23e-55 193
Msa0735520 MtrunA17_Chr7g0218601 27.443 481 321 9 33 502 34 497 3.82e-55 192
Msa0735520 MtrunA17_Chr8g0362701 28.767 438 298 10 55 485 56 486 3.96e-55 192
Msa0735520 MtrunA17_Chr1g0200951 28.603 451 288 11 36 470 64 496 6.17e-55 192
Msa0735520 MtrunA17_Chr6g0451641 27.673 477 325 10 24 487 30 499 6.82e-55 192
Msa0735520 MtrunA17_Chr4g0017411 29.581 453 283 13 26 470 22 446 8.47e-55 191
Msa0735520 MtrunA17_Chr6g0451781 28.412 447 302 7 55 487 97 539 1.00e-54 192
Msa0735520 MtrunA17_Chr6g0451751 25.600 500 347 9 4 487 16 506 1.04e-54 192
Msa0735520 MtrunA17_Chr5g0430101 28.294 463 313 10 32 487 35 485 8.03e-54 189
Msa0735520 MtrunA17_Chr6g0458561 27.255 521 350 13 1 504 18 526 8.60e-54 189
Msa0735520 MtrunA17_Chr1g0213671 28.340 494 308 12 19 487 19 491 1.33e-53 189
Msa0735520 MtrunA17_Chr5g0406651 29.938 481 311 10 33 502 30 495 3.49e-53 187
Msa0735520 MtrunA17_Chr8g0370651 27.800 500 314 15 32 504 43 522 3.94e-53 187
Msa0735520 MtrunA17_Chr4g0011881 30.462 476 312 10 34 502 31 494 4.47e-53 187
Msa0735520 MtrunA17_Chr8g0346261 28.721 477 316 14 35 504 86 545 4.48e-53 187
Msa0735520 MtrunA17_Chr8g0370641 26.769 523 336 15 9 504 16 518 7.11e-53 187
Msa0735520 MtrunA17_Chr1g0156081 28.270 474 310 10 34 487 57 520 8.02e-53 187
Msa0735520 MtrunA17_Chr3g0107541 26.966 445 313 7 67 504 86 525 9.56e-53 186
Msa0735520 MtrunA17_Chr6g0466901 28.855 454 299 9 39 471 34 484 7.21e-52 184
Msa0735520 MtrunA17_Chr7g0246181 30.000 430 291 5 44 470 45 467 1.07e-51 183
Msa0735520 MtrunA17_Chr1g0197851 25.536 466 328 7 12 470 7 460 1.18e-51 182
Msa0735520 MtrunA17_Chr3g0107611 26.141 482 309 11 29 481 46 509 2.55e-51 183
Msa0735520 MtrunA17_Chr1g0197871 25.210 476 325 10 3 470 8 460 4.24e-51 181
Msa0735520 MtrunA17_Chr3g0101741 28.000 425 278 9 71 487 3 407 4.87e-51 179
Msa0735520 MtrunA17_Chr1g0197881 25.053 471 340 6 1 470 1 459 6.18e-51 181
Msa0735520 MtrunA17_Chr4g0052881 27.975 479 301 14 26 487 24 475 1.75e-50 180
Msa0735520 MtrunA17_Chr8g0339311 27.851 456 305 10 32 471 43 490 1.89e-50 180
Msa0735520 MtrunA17_Chr1g0197891 24.892 462 334 6 10 470 11 460 2.90e-50 179
Msa0735520 MtrunA17_Chr4g0008101 26.200 500 337 11 11 487 16 506 6.71e-50 179
Msa0735520 MtrunA17_Chr6g0466941 28.132 455 304 8 39 472 34 486 1.48e-48 175
Msa0735520 MtrunA17_Chr5g0419451 28.959 442 290 14 35 470 62 485 1.61e-48 175
Msa0735520 MtrunA17_Chr4g0058211 40.404 198 115 2 295 492 10 204 4.31e-48 165
Msa0735520 MtrunA17_Chr1g0156061 27.790 457 267 6 34 487 56 452 7.36e-48 172
Msa0735520 MtrunA17_Chr5g0430111 29.056 413 268 10 24 425 28 426 8.69e-48 171
Msa0735520 MtrunA17_Chr4g0046321 27.549 461 306 9 34 480 35 481 1.60e-47 172
Msa0735520 MtrunA17_Chr4g0046331 27.310 487 324 9 10 480 11 483 2.90e-47 171
Msa0735520 MtrunA17_Chr8g0351801 27.880 434 290 9 55 470 55 483 5.57e-47 171
Msa0735520 MtrunA17_Chr4g0046351 27.549 461 306 9 34 480 35 481 1.31e-46 169
Msa0735520 MtrunA17_Chr8g0377341 29.851 469 279 14 36 485 70 507 3.00e-46 169
Msa0735520 MtrunA17_Chr7g0258211 27.373 453 303 11 56 495 61 500 3.57e-45 166
Msa0735520 MtrunA17_Chr3g0082701 27.869 488 317 14 41 504 47 523 3.00e-44 163
Msa0735520 MtrunA17_Chr8g0364651 25.662 491 333 11 10 485 7 480 1.16e-43 161
Msa0735520 MtrunA17_Chr1g0160861 31.475 305 191 8 169 470 14 303 2.51e-43 156
Msa0735520 MtrunA17_Chr2g0334021 25.658 456 302 12 32 470 32 467 2.67e-42 157
Msa0735520 MtrunA17_Chr2g0310351 40.761 184 105 2 306 487 3 184 3.60e-42 149
Msa0735520 MtrunA17_Chr5g0413911 25.304 494 331 11 33 503 42 520 5.52e-41 154
Msa0735520 MtrunA17_Chr1g0174431 38.049 205 119 4 306 504 3 205 9.36e-41 145
Msa0735520 MtrunA17_Chr4g0046681 37.363 182 113 1 306 487 33 213 4.02e-40 145
Msa0735520 MtrunA17_Chr5g0409051 23.800 500 342 16 9 485 7 490 1.03e-38 147
Msa0735520 MtrunA17_Chr5g0431591 30.252 238 151 4 258 487 72 302 1.25e-38 143
Msa0735520 MtrunA17_Chr4g0011851 37.619 210 128 2 294 502 6 213 4.79e-38 138
Msa0735520 MtrunA17_Chr5g0445351 42.405 158 87 2 332 487 52 207 9.93e-38 137
Msa0735520 MtrunA17_Chr2g0314781 41.722 151 86 1 320 470 1 149 4.90e-37 134
Msa0735520 MtrunA17_Chr4g0011941 40.341 176 103 1 306 481 3 176 5.91e-37 135
Msa0735520 MtrunA17_Chr5g0402981 36.994 173 108 1 315 486 3 175 4.37e-36 132
Msa0735520 MtrunA17_Chr3g0101591 36.066 183 113 2 307 487 42 222 8.56e-36 133
Msa0735520 MtrunA17_Chr6g0451811 36.170 188 119 1 300 487 1 187 1.48e-35 132
Msa0735520 MtrunA17_Chr2g0280071 25.000 468 324 9 33 485 63 518 1.49e-35 140
Msa0735520 MtrunA17_Chr2g0280121 25.346 434 303 9 64 485 67 491 1.63e-35 139
Msa0735520 MtrunA17_Chr2g0280081 25.173 433 303 9 64 485 564 986 2.27e-35 140
Msa0735520 MtrunA17_Chr2g0280081 25.056 443 305 9 64 492 63 492 4.99e-31 127
Msa0735520 MtrunA17_Chr8g0390871 35.294 204 126 4 287 487 10 210 4.52e-34 128
Msa0735520 MtrunA17_Chr5g0430071 30.357 280 185 6 216 487 64 341 5.73e-34 131
Msa0735520 MtrunA17_Chr5g0446101 29.747 316 200 9 181 490 1 300 1.52e-33 129
Msa0735520 MtrunA17_Chr4g0046701 44.444 126 70 0 347 472 2 127 5.60e-33 123
Msa0735520 MtrunA17_Chr4g0046661 38.922 167 102 0 306 472 27 193 4.09e-32 123
Msa0735520 MtrunA17_Chr6g0451771 32.124 193 130 1 295 487 13 204 4.24e-31 120
Msa0735520 MtrunA17_Chr5g0423621 42.424 132 74 1 320 451 1 130 1.29e-30 117
Msa0735520 MtrunA17_Chr5g0445761 38.596 171 103 1 306 476 3 171 2.94e-30 117
Msa0735520 MtrunA17_Chr8g0387101 24.828 435 303 8 64 485 65 488 1.16e-29 122
Msa0735520 MtrunA17_Chr6g0463621 32.105 190 123 3 306 490 3 191 4.62e-29 114
Msa0735520 MtrunA17_Chr3g0086681 40.310 129 75 1 344 470 5 133 2.39e-27 108
Msa0735520 MtrunA17_Chr6g0451681 32.961 179 119 1 306 484 279 456 6.72e-27 113
Msa0735520 MtrunA17_Chr3g0105761 30.500 200 134 3 306 504 2 197 1.22e-26 107
Msa0735520 MtrunA17_Chr3g0116731 46.465 99 47 2 357 455 3 95 2.03e-26 104
Msa0735520 MtrunA17_Chr2g0280041 23.744 438 303 9 64 485 95 517 2.93e-26 112
Msa0735520 MtrunA17_Chr3g0101541 41.176 119 68 1 352 470 1 117 3.22e-26 103
Msa0735520 MtrunA17_Chr5g0445371 37.063 143 86 2 347 487 74 214 6.87e-26 106
Msa0735520 MtrunA17_Chr3g0107551 28.641 206 144 2 300 504 1 204 9.69e-26 104
Msa0735520 MtrunA17_Chr2g0280011 32.338 201 121 2 307 502 11 201 1.72e-25 103
Msa0735520 MtrunA17_Chr5g0396521 24.561 456 293 12 57 471 95 540 3.43e-25 109
Msa0735520 MtrunA17_Chr3g0117301 39.474 114 67 1 357 470 3 114 3.80e-25 100
Msa0735520 MtrunA17_Chr5g0430041 37.423 163 89 4 326 485 5 157 5.38e-25 101
Msa0735520 MtrunA17_Chr2g0280061 33.333 183 116 2 307 484 11 192 2.56e-24 100
Msa0735520 MtrunA17_Chr5g0445361 38.793 116 67 2 374 487 8 121 4.87e-24 97.8
Msa0735520 MtrunA17_Chr6g0477081 27.481 262 165 7 157 414 1 241 9.51e-23 97.1
Msa0735520 MtrunA17_Chr6g0463611 25.614 285 179 8 25 297 41 304 1.01e-22 99.0
Msa0735520 MtrunA17_Chr5g0430151 37.681 138 83 2 333 469 4 139 1.41e-22 95.1
Msa0735520 MtrunA17_Chr8g0364631 22.756 479 332 11 28 485 27 488 1.54e-22 100
Msa0735520 MtrunA17_Chr0c19g0493771 23.005 426 280 10 65 469 218 616 1.07e-21 99.0
Msa0735520 MtrunA17_Chr1g0179811 24.356 427 299 12 58 473 101 514 1.55e-21 97.8
Msa0735520 MtrunA17_Chr5g0445751 27.976 168 118 1 33 200 44 208 1.79e-21 95.1
Msa0735520 MtrunA17_Chr4g0028321 34.559 136 82 4 370 503 24 154 5.80e-21 89.7
Msa0735520 MtrunA17_Chr7g0262111 25.160 469 292 16 36 476 44 481 8.30e-21 95.5
Msa0735520 MtrunA17_Chr2g0293411 26.195 481 299 21 12 471 14 459 1.65e-20 94.4
Msa0735520 MtrunA17_Chr1g0174421 25.667 300 204 7 3 297 24 309 1.70e-20 92.8
Msa0735520 MtrunA17_Chr5g0445411 31.690 142 96 1 21 161 33 174 2.06e-20 88.6
Msa0735520 MtrunA17_Chr5g0444981 35.256 156 98 2 314 469 21 173 1.31e-19 87.4
Msa0735520 MtrunA17_Chr3g0117321 33.333 117 77 1 32 148 6 121 3.32e-19 83.6
Msa0735520 MtrunA17_Chr8g0381571 22.796 465 307 14 25 473 35 463 6.97e-19 89.4
Msa0735520 MtrunA17_Chr4g0011861 30.303 165 114 1 34 198 30 193 7.06e-19 87.4
Msa0735520 MtrunA17_Chr8g0381541 22.894 463 305 14 25 471 35 461 7.53e-19 89.4
Msa0735520 MtrunA17_Chr5g0430171 29.557 203 134 4 32 234 36 229 7.91e-19 85.5
Msa0735520 MtrunA17_Chr8g0364081 23.125 480 312 15 36 475 54 516 1.86e-18 88.6
Msa0735520 MtrunA17_Chr8g0372591 30.894 123 85 0 303 425 2 124 6.46e-18 80.5
Msa0735520 MtrunA17_Chr5g0431631 33.929 112 73 1 33 143 50 161 1.02e-17 80.5
Msa0735520 MtrunA17_Chr3g0141801 22.270 467 307 16 33 483 41 467 4.67e-17 84.0
Msa0735520 MtrunA17_Chr2g0310371 32.759 116 77 1 32 147 27 141 5.14e-17 78.2
Msa0735520 MtrunA17_Chr3g0105751 23.975 317 182 12 11 298 25 311 7.57e-17 82.4
Msa0735520 MtrunA17_Chr3g0107561 25.101 247 163 7 3 232 8 249 1.23e-16 81.3
Msa0735520 MtrunA17_Chr4g0011931 25.773 291 201 7 10 295 4 284 3.14e-16 79.3
Msa0735520 MtrunA17_Chr7g0215181 23.469 490 324 14 5 471 19 480 3.27e-16 81.3
Msa0735520 MtrunA17_Chr4g0030761 35.294 119 58 3 355 471 1 102 6.93e-16 74.7
Msa0735520 MtrunA17_Chr5g0400411 22.993 461 299 18 28 471 40 461 1.05e-15 79.7
Msa0735520 MtrunA17_Chr5g0431601 38.462 78 47 1 71 148 3 79 3.32e-15 70.9
Msa0735520 MtrunA17_Chr1g0154731 23.007 439 301 12 47 475 67 478 7.02e-15 77.0
Msa0735520 MtrunA17_Chr7g0235261 23.853 436 269 17 61 471 84 481 1.27e-14 76.3
Msa0735520 MtrunA17_Chr4g0056981 47.143 70 37 0 332 401 3 72 2.11e-14 68.2
Msa0735520 MtrunA17_Chr8g0351421 22.677 538 347 22 3 505 8 511 2.48e-14 75.5
Msa0735520 MtrunA17_Chr8g0362731 25.410 366 234 14 118 469 37 377 4.33e-14 74.3
Msa0735520 MtrunA17_Chr4g0046691 27.111 225 155 7 41 263 47 264 5.86e-14 72.8
Msa0735520 MtrunA17_Chr3g0128461 22.738 431 292 17 61 476 96 500 6.92e-14 73.9
Msa0735520 MtrunA17_Chr2g0308651 24.697 413 273 14 78 475 1 390 1.30e-13 72.8
Msa0735520 MtrunA17_Chr8g0351461 22.059 544 351 23 1 505 1 510 2.06e-13 72.4
Msa0735520 MtrunA17_Chr8g0372331 33.600 125 80 2 381 504 1 123 2.28e-13 67.4
Msa0735520 MtrunA17_Chr4g0076171 29.885 174 95 4 320 487 1 153 3.65e-13 67.8
Msa0735520 MtrunA17_Chr3g0104351 20.991 424 289 13 79 477 91 493 4.18e-13 71.6
Msa0735520 MtrunA17_Chr8g0351311 22.096 439 299 11 55 471 65 482 4.23e-13 71.6
Msa0735520 MtrunA17_Chr1g0193811 24.146 439 289 18 50 470 74 486 4.59e-13 71.6
Msa0735520 MtrunA17_Chr4g0046671 24.291 247 158 7 34 263 45 279 1.16e-12 68.9
Msa0735520 MtrunA17_Chr1g0176861 35.955 89 53 2 9 94 10 97 2.56e-12 63.2
Msa0735520 MtrunA17_Chr5g0445341 33.766 77 50 1 71 146 3 79 3.19e-12 62.4
Msa0735520 MtrunA17_Chr1g0176851 28.261 138 94 2 223 358 100 234 3.52e-12 66.2
Msa0735520 MtrunA17_Chr8g0383801 46.000 50 27 0 411 460 8 57 3.63e-12 62.8
Msa0735520 MtrunA17_Chr4g0063221 22.275 422 302 12 61 473 90 494 7.50e-12 67.8
Msa0735520 MtrunA17_Chr8g0380931 30.693 202 113 8 261 450 270 456 8.10e-12 67.4
Msa0735520 MtrunA17_Chr7g0226771 23.305 472 312 13 10 469 8 441 2.06e-11 66.2
Msa0735520 MtrunA17_Chr5g0445541 40.000 70 41 1 33 101 38 107 6.47e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0735520 AT2G30490.1 84.752 505 76 1 1 505 1 504 0.0 877
Msa0735520 AT2G40890.1 35.259 502 304 10 13 504 5 495 2.31e-88 280
Msa0735520 AT1G74550.1 31.084 489 310 9 1 487 1 464 5.85e-76 247
Msa0735520 AT3G26280.1 32.218 478 303 9 19 486 18 484 1.49e-73 241
Msa0735520 AT3G26280.2 32.218 478 303 9 19 486 35 501 2.21e-73 241
Msa0735520 AT5G67310.1 33.781 521 293 21 1 506 16 499 9.15e-73 239
Msa0735520 AT4G13770.1 31.429 490 306 10 25 500 22 495 1.02e-72 239
Msa0735520 AT4G22710.1 32.189 466 299 10 42 503 62 514 1.42e-72 239
Msa0735520 AT4G22690.1 32.189 466 299 10 42 503 93 545 8.53e-72 238
Msa0735520 AT3G26230.1 31.452 496 305 9 9 486 2 480 1.47e-71 236
Msa0735520 AT5G07990.1 31.992 472 304 8 9 470 3 467 1.59e-71 236
Msa0735520 AT3G26270.1 30.882 476 307 8 21 486 20 483 2.67e-70 233
Msa0735520 AT3G26160.1 33.671 493 300 11 9 486 4 484 5.08e-70 232
Msa0735520 AT4G13310.1 31.622 487 305 13 29 505 28 496 3.74e-69 230
Msa0735520 AT1G74540.1 30.550 491 306 11 11 487 1 470 4.67e-69 229
Msa0735520 AT4G13290.1 31.743 482 299 13 31 505 31 489 4.21e-68 227
Msa0735520 AT3G48280.1 29.459 499 319 14 4 492 1 476 1.14e-67 226
Msa0735520 AT3G48290.1 30.361 471 295 11 27 487 27 474 1.18e-65 220
Msa0735520 AT3G26150.1 32.454 493 306 12 9 486 4 484 4.77e-65 219
Msa0735520 AT4G12300.1 31.568 472 297 12 27 487 36 492 4.99e-65 219
Msa0735520 AT2G45550.1 29.550 511 326 14 10 503 11 504 5.33e-65 219
Msa0735520 AT3G26180.1 31.837 490 307 11 11 486 8 484 1.24e-64 218
Msa0735520 AT1G13110.1 29.207 517 335 13 1 503 1 500 2.87e-64 217
Msa0735520 AT4G12320.1 30.816 490 308 14 27 503 36 507 2.96e-64 218
Msa0735520 AT4G37340.1 30.435 483 307 13 13 487 11 472 3.22e-64 217
Msa0735520 AT3G48290.2 29.752 484 307 11 27 487 27 500 4.38e-64 217
Msa0735520 AT4G36220.1 30.595 487 296 14 41 505 48 514 6.17e-64 216
Msa0735520 AT5G36220.1 31.172 478 287 13 10 470 10 462 7.63e-64 216
Msa0735520 AT1G13080.1 30.242 496 315 13 9 486 2 484 1.03e-63 216
Msa0735520 AT3G26170.1 30.972 494 312 12 9 486 4 484 1.16e-63 215
Msa0735520 AT4G37310.1 28.974 497 325 11 3 487 4 484 3.94e-63 214
Msa0735520 AT4G31500.1 31.340 485 308 8 1 476 1 469 5.31e-63 214
Msa0735520 AT4G37330.1 30.505 495 310 14 1 487 1 469 1.09e-62 213
Msa0735520 AT3G53280.1 31.780 472 302 10 25 487 20 480 2.24e-62 212
Msa0735520 AT2G23220.1 31.789 475 292 13 21 484 31 484 2.39e-62 212
Msa0735520 AT1G13090.2 31.087 460 303 9 26 479 21 472 2.69e-62 211
Msa0735520 AT3G48310.1 29.167 456 284 11 27 470 26 454 3.50e-62 211
Msa0735520 AT3G48270.1 29.933 451 287 9 27 470 25 453 1.02e-61 210
Msa0735520 AT2G45560.1 28.088 502 334 13 3 492 9 495 1.59e-61 210
Msa0735520 AT4G37370.1 29.876 482 289 15 8 470 4 455 2.25e-61 209
Msa0735520 AT3G53300.1 30.819 464 309 7 30 487 25 482 1.11e-60 207
Msa0735520 AT2G23190.1 30.081 492 312 12 5 485 44 514 1.50e-60 208
Msa0735520 AT4G37410.1 31.707 492 293 17 11 487 10 473 1.58e-60 207
Msa0735520 AT3G28740.1 31.042 451 285 10 27 470 33 464 2.71e-60 207
Msa0735520 AT5G05260.2 28.571 525 346 11 5 504 1 521 3.33e-60 207
Msa0735520 AT5G10600.1 29.512 471 312 8 6 470 18 474 4.93e-60 206
Msa0735520 AT5G25120.1 28.745 494 314 11 10 487 6 477 1.01e-59 205
Msa0735520 AT3G44250.1 31.144 472 306 11 25 487 20 481 1.06e-59 205
Msa0735520 AT5G57220.1 30.346 491 295 14 11 487 10 467 1.87e-59 204
Msa0735520 AT3G26220.1 30.894 492 313 9 10 486 4 483 2.27e-59 204
Msa0735520 AT3G26200.1 30.233 473 310 10 25 487 20 482 3.44e-59 203
Msa0735520 AT3G26190.1 30.126 478 307 11 25 489 20 483 4.33e-59 203
Msa0735520 AT5G25130.1 29.243 489 310 10 13 487 11 477 1.01e-58 202
Msa0735520 AT4G37360.1 28.398 493 326 11 1 487 1 472 1.33e-58 202
Msa0735520 AT1G33720.1 28.083 527 332 13 1 503 1 504 1.55e-58 202
Msa0735520 AT3G52970.1 28.423 482 321 10 5 470 5 478 2.57e-58 201
Msa0735520 AT2G30770.1 28.989 445 299 10 30 470 30 461 2.63e-58 201
Msa0735520 AT1G11610.1 27.984 486 324 11 28 505 28 495 8.69e-58 199
Msa0735520 AT4G37320.1 29.019 479 301 13 6 470 3 456 1.09e-57 199
Msa0735520 AT5G06900.1 29.747 474 299 13 10 471 12 463 1.43e-57 199
Msa0735520 AT3G26210.1 29.847 459 295 12 42 487 40 484 2.99e-57 198
Msa0735520 AT5G25180.1 28.542 487 290 11 27 487 23 477 3.31e-57 198
Msa0735520 AT2G24180.1 30.201 447 289 9 33 470 36 468 3.64e-57 198
Msa0735520 AT5G10610.1 30.087 462 304 11 14 470 11 458 6.17e-57 197
Msa0735520 AT4G12310.1 31.441 458 288 12 42 487 53 496 6.62e-57 198
Msa0735520 AT5G04330.1 29.363 487 313 12 34 505 33 503 1.14e-56 197
Msa0735520 AT3G52970.2 28.427 496 317 12 5 470 5 492 1.17e-56 197
Msa0735520 AT1G11610.2 28.454 485 321 11 28 504 28 494 1.93e-56 196
Msa0735520 AT5G04630.1 27.254 488 334 9 9 485 13 490 2.98e-56 196
Msa0735520 AT5G35715.1 29.343 426 286 8 70 487 2 420 7.04e-56 193
Msa0735520 AT2G45570.1 29.348 460 306 12 42 492 47 496 7.45e-56 195
Msa0735520 AT3G26300.1 26.990 515 335 13 10 506 6 497 8.46e-56 194
Msa0735520 AT3G61040.1 29.386 456 279 12 32 470 32 461 8.73e-56 194
Msa0735520 AT3G10560.1 28.306 484 330 10 9 485 21 494 1.05e-55 194
Msa0735520 AT3G48320.1 28.291 509 317 12 10 498 9 489 1.86e-55 193
Msa0735520 AT5G44620.1 29.817 436 296 8 55 487 67 495 2.04e-55 194
Msa0735520 AT4G37430.1 27.846 492 313 12 13 487 10 476 2.15e-55 193
Msa0735520 AT4G39950.1 28.407 521 331 14 4 503 24 523 4.85e-55 193
Msa0735520 AT1G11600.1 26.994 489 330 10 31 505 33 508 5.76e-55 192
Msa0735520 AT5G05260.1 27.099 524 323 11 5 504 1 489 6.35e-55 192
Msa0735520 AT1G01280.1 28.661 478 311 13 42 504 41 503 1.27e-54 191
Msa0735520 AT4G39950.2 28.407 521 331 14 4 503 64 563 1.56e-54 193
Msa0735520 AT5G25140.1 28.715 498 309 11 10 487 6 477 1.58e-54 191
Msa0735520 AT2G45580.1 29.424 486 288 15 44 503 49 505 1.64e-54 191
Msa0735520 AT3G48300.1 29.120 443 285 11 35 470 31 451 1.68e-54 191
Msa0735520 AT3G48300.2 29.120 443 285 11 35 470 33 453 1.75e-54 191
Msa0735520 AT2G30750.1 28.112 498 314 11 25 505 25 495 1.92e-54 191
Msa0735520 AT5G57260.1 28.092 477 301 14 19 476 18 471 3.86e-54 190
Msa0735520 AT3G25180.1 28.918 453 289 14 35 471 40 475 4.88e-54 190
Msa0735520 AT5G24950.1 28.700 446 292 11 33 469 32 460 1.12e-53 189
Msa0735520 AT3G26330.1 27.347 490 315 12 34 506 32 497 1.44e-53 188
Msa0735520 AT2G22330.1 27.619 525 334 13 1 503 25 525 1.50e-53 189
Msa0735520 AT2G22330.2 28.659 492 314 12 1 470 48 524 1.84e-53 189
Msa0735520 AT3G20130.1 29.501 461 303 9 53 503 62 510 3.08e-53 188
Msa0735520 AT1G58260.1 28.488 516 338 14 10 504 14 519 7.87e-53 187
Msa0735520 AT3G26830.1 28.776 490 288 12 10 470 5 462 1.04e-52 186
Msa0735520 AT1G74110.1 28.247 485 314 17 35 502 65 532 1.05e-52 187
Msa0735520 AT4G12330.1 27.002 437 306 8 55 487 67 494 1.21e-52 186
Msa0735520 AT3G26320.1 26.955 486 317 11 19 487 17 481 1.25e-52 186
Msa0735520 AT1G13100.1 30.543 442 274 12 44 470 39 462 1.44e-52 186
Msa0735520 AT5G09970.1 29.933 451 283 14 35 470 71 503 3.91e-52 185
Msa0735520 AT1G79370.1 28.226 496 322 12 11 478 18 507 4.14e-52 186
Msa0735520 AT1G66540.1 29.894 378 239 9 117 487 1 359 7.20e-52 181
Msa0735520 AT5G42590.1 28.687 495 331 10 1 487 1 481 4.52e-51 182
Msa0735520 AT3G20140.1 26.818 440 315 5 31 470 40 472 9.55e-51 181
Msa0735520 AT5G04660.1 28.414 454 304 9 60 504 70 511 1.03e-50 181
Msa0735520 AT4G15330.1 26.737 475 337 8 31 503 36 501 2.92e-50 180
Msa0735520 AT3G20090.2 27.419 434 298 7 44 470 54 477 3.19e-50 180
Msa0735520 AT4G15360.1 25.780 481 314 9 10 470 16 473 4.12e-50 180
Msa0735520 AT5G06905.1 28.215 521 325 19 9 503 12 509 8.37e-50 179
Msa0735520 AT2G46660.1 27.571 457 307 11 35 485 72 510 9.04e-50 179
Msa0735520 AT4G37400.1 27.865 445 286 10 55 487 52 473 9.49e-50 178
Msa0735520 AT3G26310.1 25.662 491 329 11 13 487 10 480 1.92e-49 177
Msa0735520 AT2G42250.1 28.723 470 306 10 32 487 40 494 3.97e-49 177
Msa0735520 AT3G20960.2 27.885 416 283 7 62 470 70 475 5.91e-49 176
Msa0735520 AT5G24960.1 29.530 447 293 12 30 469 30 461 2.28e-48 174
Msa0735520 AT3G61880.1 27.234 470 313 13 27 485 60 511 3.98e-48 174
Msa0735520 AT3G20110.1 27.216 485 329 10 10 487 14 481 4.34e-48 174
Msa0735520 AT4G31970.1 26.721 494 325 11 6 471 1 485 5.78e-48 174
Msa0735520 AT3G61880.2 27.234 470 313 13 27 485 60 511 7.49e-48 174
Msa0735520 AT1G13710.1 28.571 441 287 14 55 484 70 493 7.82e-48 173
Msa0735520 AT4G31940.1 26.667 495 325 14 6 471 1 486 7.88e-48 173
Msa0735520 AT5G36220.2 35.179 307 165 9 174 470 34 316 2.35e-47 168
Msa0735520 AT3G26290.1 26.815 496 321 13 27 506 28 497 6.78e-47 170
Msa0735520 AT2G25160.1 27.219 507 338 14 1 487 1 496 7.92e-47 171
Msa0735520 AT3G26290.2 27.309 498 316 14 27 506 41 510 8.40e-47 170
Msa0735520 AT1G33730.1 34.035 285 175 6 223 501 89 366 1.10e-46 167
Msa0735520 AT1G33730.2 34.035 285 175 6 223 501 89 366 1.10e-46 167
Msa0735520 AT4G13310.2 31.383 376 238 9 29 397 28 390 1.26e-46 167
Msa0735520 AT1G33720.4 28.535 389 246 9 129 503 2 372 2.99e-46 166
Msa0735520 AT1G33720.3 28.535 389 246 9 129 503 2 372 2.99e-46 166
Msa0735520 AT1G33720.5 28.535 389 246 9 129 503 2 372 2.99e-46 166
Msa0735520 AT3G20940.1 27.416 445 307 7 33 470 42 477 5.11e-46 168
Msa0735520 AT3G20080.2 27.009 448 309 6 31 470 40 477 1.06e-45 167
Msa0735520 AT3G20080.1 27.009 448 309 6 31 470 40 477 1.06e-45 167
Msa0735520 AT3G10570.1 25.277 451 321 8 60 504 72 512 1.06e-45 167
Msa0735520 AT4G20240.1 28.079 406 270 9 23 421 23 413 2.53e-45 165
Msa0735520 AT3G20120.4 27.149 442 303 7 53 487 61 490 3.12e-45 166
Msa0735520 AT1G01190.2 27.601 471 312 13 23 484 67 517 3.41e-45 166
Msa0735520 AT1G01190.1 27.601 471 312 13 23 484 62 512 3.71e-45 166
Msa0735520 AT1G50520.1 26.552 467 298 11 56 500 66 509 4.63e-45 166
Msa0735520 AT3G20130.2 29.128 436 287 9 78 503 59 482 5.32e-45 165
Msa0735520 AT4G31950.1 26.653 499 308 15 6 471 1 474 1.37e-44 164
Msa0735520 AT2G27000.1 25.870 460 319 8 55 505 61 507 1.50e-44 164
Msa0735520 AT3G20960.1 28.997 369 243 8 109 470 16 372 3.23e-44 161
Msa0735520 AT5G47990.1 26.593 455 322 7 55 506 64 509 3.51e-44 163
Msa0735520 AT2G14100.1 27.021 433 283 8 52 470 62 475 3.55e-44 163
Msa0735520 AT1G66540.2 32.082 293 178 7 197 487 27 300 6.32e-44 158
Msa0735520 AT3G32047.1 26.179 424 295 7 53 470 62 473 5.27e-43 160
Msa0735520 AT4G15380.1 27.578 417 279 7 62 470 71 472 7.82e-43 159
Msa0735520 AT1G33720.2 27.536 414 243 11 129 503 2 397 1.70e-42 156
Msa0735520 AT1G64940.1 26.789 489 328 15 33 504 33 508 2.75e-42 158
Msa0735520 AT3G20950.1 24.948 481 346 8 33 506 42 514 5.67e-42 157
Msa0735520 AT2G02580.1 28.252 492 323 11 10 487 6 481 9.34e-42 156
Msa0735520 AT4G15350.1 26.841 421 300 5 53 470 55 470 4.00e-41 155
Msa0735520 AT5G25900.1 24.169 451 314 10 33 470 41 476 1.10e-40 153
Msa0735520 AT1G64930.1 27.236 492 323 15 33 504 32 508 1.47e-40 153
Msa0735520 AT2G45580.2 32.759 290 177 9 223 503 71 351 3.02e-40 149
Msa0735520 AT4G15330.2 25.053 475 317 11 31 503 36 473 1.07e-39 150
Msa0735520 AT3G20100.1 24.792 480 330 9 42 506 50 513 2.34e-39 150
Msa0735520 AT1G50560.1 27.169 438 275 11 55 470 65 480 4.38e-39 149
Msa0735520 AT3G20090.1 27.865 384 258 8 129 505 1 372 5.02e-39 146
Msa0735520 AT2G27010.1 26.737 475 280 14 55 506 57 486 7.08e-39 148
Msa0735520 AT2G12190.1 26.763 482 324 14 33 497 32 501 1.43e-38 147
Msa0735520 AT1G13080.2 29.745 353 223 11 147 486 26 366 1.46e-38 145
Msa0735520 AT1G64950.1 26.585 489 329 15 33 504 32 507 3.99e-38 146
Msa0735520 AT3G20120.2 30.719 306 196 5 172 470 43 339 6.99e-38 143
Msa0735520 AT3G20120.3 30.719 306 196 5 172 470 43 339 6.99e-38 143
Msa0735520 AT3G20120.1 30.719 306 196 5 172 470 43 339 6.99e-38 143
Msa0735520 AT3G03470.1 28.513 491 305 16 32 496 30 500 7.30e-38 145
Msa0735520 AT1G28430.1 25.352 426 295 8 55 470 62 474 4.58e-37 143
Msa0735520 AT5G42580.1 25.866 433 272 12 55 470 61 461 8.20e-37 142
Msa0735520 AT4G20240.2 26.546 388 264 8 23 404 23 395 9.95e-37 140
Msa0735520 AT3G26180.2 35.227 264 152 8 232 486 97 350 7.98e-36 137
Msa0735520 AT1G16410.1 23.770 488 337 11 10 469 14 494 1.42e-35 139
Msa0735520 AT2G05180.1 25.876 371 270 4 53 423 61 426 1.62e-35 138
Msa0735520 AT5G35917.1 25.845 503 288 15 29 504 38 482 2.97e-35 138
Msa0735520 AT3G20935.1 35.000 220 135 4 290 506 122 336 3.64e-35 135
Msa0735520 AT5G61320.1 26.549 452 294 10 45 485 45 469 1.49e-34 136
Msa0735520 AT1G16400.1 23.992 471 321 10 24 469 35 493 4.07e-34 135
Msa0735520 AT3G20080.4 32.174 230 150 3 244 470 114 340 4.30e-34 132
Msa0735520 AT3G20080.5 32.174 230 150 3 244 470 114 340 4.30e-34 132
Msa0735520 AT3G20080.6 32.174 230 150 3 244 470 114 340 4.30e-34 132
Msa0735520 AT3G20080.3 32.174 230 150 3 244 470 114 340 4.30e-34 132
Msa0735520 AT3G61040.2 26.873 387 242 12 32 401 32 394 5.80e-33 130
Msa0735520 AT3G53290.1 28.019 414 250 10 87 487 11 389 6.40e-33 130
Msa0735520 AT1G64900.1 26.240 484 320 16 40 504 38 503 2.92e-32 129
Msa0735520 AT2G45580.3 27.513 378 226 12 44 397 49 402 1.03e-30 124
Msa0735520 AT5G24960.2 26.632 383 262 10 30 406 30 399 2.56e-27 114
Msa0735520 AT3G25180.2 26.124 356 232 13 35 374 40 380 1.82e-26 111
Msa0735520 AT1G16410.2 22.549 408 284 10 10 392 14 414 1.80e-22 100
Msa0735520 AT1G13090.1 35.542 166 105 2 26 191 21 184 3.08e-21 94.7
Msa0735520 AT2G25160.2 25.495 404 278 12 1 391 1 394 3.17e-21 96.7
Msa0735520 AT4G15110.1 23.171 492 307 15 57 502 102 568 5.41e-21 96.7
Msa0735520 AT1G31800.1 23.543 446 275 13 65 480 139 548 1.43e-20 95.5
Msa0735520 AT5G35920.1 34.028 144 93 1 361 504 6 147 1.32e-19 86.3
Msa0735520 AT2G26170.1 22.222 459 316 13 35 469 47 488 3.90e-19 90.9
Msa0735520 AT5G38450.1 25.948 501 320 16 3 469 2 485 3.58e-18 87.8
Msa0735520 AT3G14610.1 22.894 463 322 13 47 496 70 510 9.05e-18 86.7
Msa0735520 AT3G14620.1 25.909 440 289 16 47 473 75 490 1.71e-17 85.9
Msa0735520 AT3G53305.1 35.443 158 88 4 337 487 165 315 2.76e-17 83.6
Msa0735520 AT3G53305.1 33.333 126 83 1 70 195 2 126 3.22e-13 71.2
Msa0735520 AT3G53130.1 22.603 438 293 12 58 473 101 514 4.38e-17 84.7
Msa0735520 AT2G26170.2 27.957 186 131 3 285 469 222 405 2.69e-16 81.6
Msa0735520 AT2G44890.1 23.855 415 266 16 118 505 118 509 2.77e-16 82.0
Msa0735520 AT2G29090.2 22.588 456 294 14 27 469 43 452 7.08e-16 80.5
Msa0735520 AT2G29090.1 22.588 456 294 14 27 469 43 452 7.08e-16 80.5
Msa0735520 AT2G32440.2 22.128 470 313 16 3 454 8 442 8.90e-16 80.1
Msa0735520 AT2G32440.1 22.128 470 313 16 3 454 8 442 8.90e-16 80.1
Msa0735520 AT2G26710.1 23.923 418 285 14 61 469 91 484 1.10e-15 80.1
Msa0735520 AT5G24910.1 23.918 439 288 15 58 475 94 507 7.78e-15 77.4
Msa0735520 AT2G45560.2 23.973 292 201 9 3 285 9 288 1.88e-14 74.7
Msa0735520 AT2G44890.2 23.855 415 248 17 118 505 118 491 3.43e-13 72.0
Msa0735520 AT1G57750.1 22.831 438 289 17 53 471 60 467 4.48e-13 72.0
Msa0735520 AT4G39510.1 26.733 202 141 5 282 477 282 482 6.59e-13 71.2
Msa0735520 AT5G02900.1 28.272 191 128 5 295 481 274 459 1.06e-12 70.5
Msa0735520 AT2G45510.1 22.710 524 351 22 9 505 13 509 2.81e-12 69.3
Msa0735520 AT2G45560.3 26.702 191 136 4 3 192 9 196 6.06e-12 66.2
Msa0735520 AT2G42850.1 22.601 469 292 17 13 454 14 438 1.67e-11 67.0
Msa0735520 AT3G14690.2 21.398 472 317 16 47 496 106 545 1.74e-11 67.0
Msa0735520 AT3G14690.1 21.398 472 317 16 47 496 71 510 2.45e-11 66.2
Msa0735520 AT1G05160.2 22.022 445 298 17 24 454 36 445 2.72e-11 66.2
Msa0735520 AT1G05160.1 22.022 445 298 17 24 454 36 445 2.72e-11 66.2
Msa0735520 AT3G14660.1 21.875 448 309 15 63 496 90 510 3.58e-11 65.9

Find 144 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGACTTCTTTGGCGAGTTC+TGG 0.170849 5_1:+50882393 None:intergenic
TTTCTTCCCTTACTTTGTTT+TGG 0.181352 5_1:+50879319 None:intergenic
ACTATTGATCGAAGAATATT+AGG 0.195369 5_1:+50878576 None:intergenic
GTAAAGTAAAACAAATTAAA+AGG 0.205723 5_1:+50878765 None:intergenic
ATGTGCTATTGATCACATTT+TGG 0.251736 5_1:-50881326 Msa0735520:CDS
TCAACAAATATATCTATATT+TGG 0.269883 5_1:-50878508 Msa0735520:three_prime_UTR
CCTATCCTTGGTATCACTAT+TGG 0.278977 5_1:-50878940 Msa0735520:CDS
GCTTTCAACTTCACAAATAA+AGG 0.311858 5_1:+50882042 None:intergenic
ATTCAGGCCCGAACGGTTCT+TGG 0.327697 5_1:-50879058 Msa0735520:CDS
CGGCGATGAAGAGGGCTAAA+AGG 0.333147 5_1:+50882616 None:intergenic
GAAGAAATGGACAGAGTTCT+TGG 0.337081 5_1:-50879303 Msa0735520:CDS
GAGTCTCATGTTGAGGCTAA+TGG 0.343999 5_1:-50879030 Msa0735520:CDS
GTGTTGGTGGGATTGTTATA+AGG 0.345916 5_1:-50882140 Msa0735520:CDS
ACCGAAGCGTTTGGCGTAAT+CGG 0.352480 5_1:+50882467 None:intergenic
TCTCTTTGATCACAGCTTGT+AGG 0.353178 5_1:+50879235 None:intergenic
AGGCTAATGGAAATGACTTT+AGG 0.353251 5_1:-50879017 Msa0735520:CDS
GACTTTAGGTACCTTCCTTT+CGG 0.354712 5_1:-50879003 Msa0735520:CDS
GGACTTCTTTGGCGAGTTCT+GGG 0.361842 5_1:+50882394 None:intergenic
TTGTGTGTGGAGGACTTCTT+TGG 0.362442 5_1:+50882383 None:intergenic
ATGTCTTATTAGCCTGCAAT+TGG 0.363434 5_1:-50878695 Msa0735520:three_prime_UTR
CAGTCCCTATCTTCGGTAAC+TGG 0.363552 5_1:-50882527 Msa0735520:CDS
ACCAATATCTTGCTCTCGGC+AGG 0.364498 5_1:+50879132 None:intergenic
AAGACTAATTAAAATGATCT+TGG 0.365555 5_1:+50878799 None:intergenic
CTATCCTTGGTATCACTATT+GGG 0.370741 5_1:-50878939 Msa0735520:CDS
ATCATTGCTCGTGGTGCTCT+TGG 0.373367 5_1:+50881357 None:intergenic
TTCTTCGATCAATAGTGTTC+TGG 0.376674 5_1:-50878569 Msa0735520:three_prime_UTR
TTTGGGGTAATTGAAATGTT+AGG 0.378529 5_1:+50882704 None:intergenic
AAACAAAGTAAGGGAAGAAA+TGG 0.379722 5_1:-50879316 Msa0735520:CDS
AACACTATGGTCAATTGAAT+GGG 0.381364 5_1:-50879373 Msa0735520:CDS
CAACACTATGGTCAATTGAA+TGG 0.393360 5_1:-50879374 Msa0735520:CDS
CACACACAAGGTGTTGAATT+CGG 0.395426 5_1:-50882369 Msa0735520:CDS
GGAGATCTGGCTCAGTTACT+TGG 0.398355 5_1:+50879271 None:intergenic
TTATTCACCTACCCAATTGC+AGG 0.400048 5_1:+50878683 None:intergenic
GAAGATTTCACCGAAGCGTT+TGG 0.402425 5_1:+50882458 None:intergenic
CCCTGCCGAGAGCAAGATAT+TGG 0.407814 5_1:-50879133 Msa0735520:CDS
AAGACATCCAAAACAAAGTA+AGG 0.410710 5_1:-50879326 Msa0735520:CDS
AGCTTTGAACTTTGAAGTAA+TGG 0.414816 5_1:-50878629 Msa0735520:three_prime_UTR
TGGTATCACTATTGGGCGTC+TGG 0.414879 5_1:-50878932 Msa0735520:CDS
TTGAGTATCCTCTAAAAGTT+AGG 0.416082 5_1:+50878534 None:intergenic
GAATGGTGAAAGGAGTCGTT+TGG 0.416617 5_1:-50882016 Msa0735520:CDS
GGCTCAGTTACTTGGTGTCC+TGG 0.420216 5_1:+50879279 None:intergenic
CTCTTCCTCCAAGAACCGTT+CGG 0.420340 5_1:+50879050 None:intergenic
TAAGGTAGCTTGTGGAGATC+TGG 0.424245 5_1:+50879258 None:intergenic
TGAAGCCAGTTACCGAAGAT+AGG 0.425745 5_1:+50882522 None:intergenic
TGGCGTAATCGGTGAGGTTA+CGG 0.433055 5_1:+50882478 None:intergenic
TTGTTCAACAGTATCGTTAC+GGG 0.444094 5_1:-50882218 Msa0735520:CDS
ATTCTTGCCTTACCTATCCT+TGG 0.447080 5_1:-50878952 Msa0735520:CDS
TCTTCCTCCAAGAACCGTTC+GGG 0.447204 5_1:+50879051 None:intergenic
GTTGAGAACATCAATGTTGC+TGG 0.448186 5_1:-50881256 Msa0735520:intron
TGATGTATAATATAATGTAT+AGG 0.449542 5_1:-50882101 Msa0735520:CDS
GTGGGATTGTTATAAGGAAG+AGG 0.454440 5_1:-50882134 Msa0735520:CDS
GGTAAGGCAAGAATAATTCC+AGG 0.458367 5_1:+50878961 None:intergenic
ACCGATTACGCCAAACGCTT+CGG 0.463672 5_1:-50882468 Msa0735520:CDS
CTTCATGATGCAAAGCTCAA+TGG 0.470799 5_1:-50879165 Msa0735520:CDS
TAAAGTAAAACAAATTAAAA+GGG 0.474005 5_1:+50878766 None:intergenic
ATCTTTGATTGTCCTGGTGG+AGG 0.476909 5_1:+50878889 None:intergenic
CATTGAGCTTTGCATCATGA+AGG 0.479951 5_1:+50879166 None:intergenic
TTGCAAACAACCCGGCTCAC+TGG 0.482878 5_1:-50879095 Msa0735520:CDS
TTGATCACAGCTTGTAGGTA+AGG 0.484711 5_1:+50879240 None:intergenic
AAGAGCACCACGAGCAATGA+TGG 0.485951 5_1:-50881355 Msa0735520:CDS
CTATTTGAAGGTTTGTAAAG+AGG 0.491509 5_1:-50881932 Msa0735520:CDS
AAATGTTAGGAGTGGTTGTT+GGG 0.493634 5_1:+50882717 None:intergenic
AAGATTGACACTTCTGAGAA+AGG 0.498964 5_1:-50878871 Msa0735520:CDS
CTATTGATCGAAGAATATTA+GGG 0.499790 5_1:+50878577 None:intergenic
CCAATCCCAGTCCCTATCTT+CGG 0.500219 5_1:-50882534 Msa0735520:CDS
TGTCTTATTAGCCTGCAATT+GGG 0.502944 5_1:-50878694 Msa0735520:three_prime_UTR
TGAAATCTTCCTCCTACGTA+TGG 0.505454 5_1:-50882445 Msa0735520:CDS
AGGTACCTTCCTTTCGGTGT+TGG 0.506378 5_1:-50878997 Msa0735520:CDS
GTGAAGTTGAAAGCTTTGAA+TGG 0.509586 5_1:-50882033 Msa0735520:CDS
GACATGGTGTTCACTGTCTA+CGG 0.511204 5_1:-50882297 Msa0735520:CDS
GAAATGTTAGGAGTGGTTGT+TGG 0.513856 5_1:+50882716 None:intergenic
AACGCTGAAGCGAGTGTTGG+TGG 0.516104 5_1:-50882153 Msa0735520:CDS
CCGAAGATAGGGACTGGGAT+TGG 0.517085 5_1:+50882534 None:intergenic
GGCGATGAAGAGGGCTAAAA+GGG 0.517105 5_1:+50882617 None:intergenic
CAGCAATTGAAACAACACTA+TGG 0.518416 5_1:-50879386 Msa0735520:CDS
CAGTTACCGAAGATAGGGAC+TGG 0.521157 5_1:+50882528 None:intergenic
GTTGTTCAACAGTATCGTTA+CGG 0.527043 5_1:-50882219 Msa0735520:CDS
TGAGATTGTGACGGCGATTG+TGG 0.528821 5_1:+50882593 None:intergenic
ACAACTTTGTTTGTGAAGAA+CGG 0.528889 5_1:+50882237 None:intergenic
GTGTCAATCTTTGATTGTCC+TGG 0.533826 5_1:+50878883 None:intergenic
TCATGTGTGGGACGAGGAGT+GGG 0.535005 5_1:+50879190 None:intergenic
AAAGTTCAAAGCTTTATACA+TGG 0.537011 5_1:+50878639 None:intergenic
TGAAAGCTTTGAATGGTGAA+AGG 0.542046 5_1:-50882026 Msa0735520:CDS
CAGGCCCGAACGGTTCTTGG+AGG 0.542500 5_1:-50879055 Msa0735520:CDS
TTCATGTGTGGGACGAGGAG+TGG 0.549469 5_1:+50879189 None:intergenic
TGATCTTGGCTTAGCAACAA+TGG 0.549602 5_1:+50878813 None:intergenic
CGTTCGGGCCTGAATTCCTC+CGG 0.550126 5_1:+50879066 None:intergenic
ATAGGGACTGGGATTGGACC+TGG 0.552093 5_1:+50882540 None:intergenic
TTATTAGCCTGCAATTGGGT+AGG 0.552364 5_1:-50878690 Msa0735520:three_prime_UTR
AGTGATACCAAGGATAGGTA+AGG 0.561800 5_1:+50878945 None:intergenic
GGAGTTTGAAGCGTTTGCCA+CGG 0.564328 5_1:+50882565 None:intergenic
GTAAAGAGGTTAAAGATCGT+AGG 0.567179 5_1:-50881918 Msa0735520:CDS
GTTGGTAGAAGAAGTTGCCC+TGG 0.570083 5_1:-50878979 Msa0735520:CDS
TTCAACAGTATCGTTACGGG+TGG 0.572973 5_1:-50882215 Msa0735520:CDS
GAAGCCAGTTACCGAAGATA+GGG 0.573920 5_1:+50882523 None:intergenic
CGATTGTGGCGGCGATGAAG+AGG 0.574470 5_1:+50882607 None:intergenic
GAAGGTTCATGTGTGGGACG+AGG 0.580695 5_1:+50879184 None:intergenic
CACAGGTAAAGGACAAGACA+TGG 0.582112 5_1:-50882313 Msa0735520:CDS
TCACTGTCTACGGCGAACAT+TGG 0.585742 5_1:-50882287 Msa0735520:CDS
ATTGACCAATATCTTGCTCT+CGG 0.585867 5_1:+50879128 None:intergenic
TTCTACCAACACCGAAAGGA+AGG 0.586174 5_1:+50878992 None:intergenic
GATTGTGGCGGCGATGAAGA+GGG 0.590452 5_1:+50882608 None:intergenic
GACTTCTTTGGCGAGTTCTG+GGG 0.591053 5_1:+50882395 None:intergenic
GAAATCTTCCTCCTACGTAT+GGG 0.593067 5_1:-50882444 Msa0735520:CDS
CGAATTCAACACCTTGTGTG+TGG 0.593676 5_1:+50882370 None:intergenic
CGGAGGAATTCAGGCCCGAA+CGG 0.595996 5_1:-50879065 Msa0735520:CDS
TCAATCTTTGATTGTCCTGG+TGG 0.602060 5_1:+50878886 None:intergenic
CATCATGAAGGTTCATGTGT+GGG 0.604769 5_1:+50879178 None:intergenic
CCAATATCTTGCTCTCGGCA+GGG 0.605489 5_1:+50879133 None:intergenic
CTGGGGAAGAAACTACGACT+AGG 0.605567 5_1:+50882412 None:intergenic
AAGTTCAAAGCTTTATACAT+GGG 0.606998 5_1:+50878640 None:intergenic
ACGCTGAAGCGAGTGTTGGT+GGG 0.612102 5_1:-50882152 Msa0735520:CDS
CTTCTTCTACCAACACCGAA+AGG 0.613147 5_1:+50878988 None:intergenic
GGTAATTGAAATGTTAGGAG+TGG 0.613714 5_1:+50882709 None:intergenic
ATGGTGGCTTGCAAACAACC+CGG 0.613923 5_1:-50879103 Msa0735520:CDS
CCAATAGTGATACCAAGGAT+AGG 0.614902 5_1:+50878940 None:intergenic
TACGTTGTCCCATACGTAGG+AGG 0.619300 5_1:+50882436 None:intergenic
GCAAGATATTGGTCAATGCA+TGG 0.621805 5_1:-50879122 Msa0735520:CDS
GGGACTGGGATTGGACCTGG+TGG 0.623455 5_1:+50882543 None:intergenic
TTCGGTAACTGGCTTCAAGT+CGG 0.623482 5_1:-50882516 Msa0735520:CDS
AACAACGCTGAAGCGAGTGT+TGG 0.624893 5_1:-50882156 Msa0735520:CDS
AGTTACCGAAGATAGGGACT+GGG 0.626229 5_1:+50882529 None:intergenic
AGACATCCAAAACAAAGTAA+GGG 0.628976 5_1:-50879325 Msa0735520:CDS
AAACGCTTCAAACTCCCACC+AGG 0.631432 5_1:-50882558 Msa0735520:CDS
ATGGACAGAGTTCTTGGACC+AGG 0.634227 5_1:-50879297 Msa0735520:CDS
GGACTGGGATTGGACCTGGT+GGG 0.636448 5_1:+50882544 None:intergenic
AGAGACACTTCGTCTACGAA+TGG 0.641544 5_1:-50879217 Msa0735520:CDS
CGTAATCGGTGAGGTTACGG+TGG 0.643165 5_1:+50882481 None:intergenic
AGCGTTTGGCGTAATCGGTG+AGG 0.646976 5_1:+50882472 None:intergenic
GCATCATGAAGGTTCATGTG+TGG 0.648390 5_1:+50879177 None:intergenic
GGAGGAAGAGTCTCATGTTG+AGG 0.649581 5_1:-50879037 Msa0735520:CDS
ATTCAACACCTTGTGTGTGG+AGG 0.649846 5_1:+50882373 None:intergenic
AAAGAAGTCCTCCACACACA+AGG 0.650257 5_1:-50882381 Msa0735520:CDS
ATTGACACTTCTGAGAAAGG+AGG 0.653406 5_1:-50878868 Msa0735520:CDS
TCAACAGTATCGTTACGGGT+GGG 0.656271 5_1:-50882214 Msa0735520:CDS
ACACTATGGTCAATTGAATG+GGG 0.657640 5_1:-50879372 Msa0735520:CDS
GATTGTGACGGCGATTGTGG+CGG 0.658289 5_1:+50882596 None:intergenic
TTTGTTTGTGAAGAACGGAA+CGG 0.669513 5_1:+50882242 None:intergenic
GTAAGGCAAGAATAATTCCA+GGG 0.672491 5_1:+50878962 None:intergenic
CTTGTAGGTAAGGTAGCTTG+TGG 0.672630 5_1:+50879250 None:intergenic
GACGCCCAATAGTGATACCA+AGG 0.675885 5_1:+50878935 None:intergenic
GGTTACGTTGTCCCATACGT+AGG 0.713030 5_1:+50882433 None:intergenic
GTCACAATCTCAAAACTCCG+TGG 0.713947 5_1:-50882582 Msa0735520:CDS
AGATATTGGTCAATGCATGG+TGG 0.725563 5_1:-50879119 Msa0735520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTAATAACATTTAAAG+GGG - chr5_1:50879641-50879660 Msa0735520:intron 10.0%
!!! CATTTATTTATTTTTGTAAA+GGG + chr5_1:50879945-50879964 None:intergenic 10.0%
!!! ACATTTATTTATTTTTGTAA+AGG + chr5_1:50879946-50879965 None:intergenic 10.0%
!!! TATTTGAAATAACAATTAAA+AGG - chr5_1:50880042-50880061 Msa0735520:intron 10.0%
!!! ATTTGAAATAACAATTAAAA+GGG - chr5_1:50880043-50880062 Msa0735520:intron 10.0%
!! TTAAAAAACTTATAAAATTG+AGG - chr5_1:50880385-50880404 Msa0735520:intron 10.0%
!! TAAAGTAAAACAAATTAAAA+GGG + chr5_1:50882387-50882406 None:intergenic 10.0%
!!! ATTTTAATAATTCAAAATGT+GGG - chr5_1:50882420-50882439 Msa0735520:CDS 10.0%
!! TGATGTATAATATAATGTAT+AGG - chr5_1:50879049-50879068 Msa0735520:CDS 15.0%
!!! ATGACAAGTTTTTTTTTTTT+TGG - chr5_1:50879430-50879449 Msa0735520:intron 15.0%
!! AAATTCATTTAATCCATATT+AGG - chr5_1:50879493-50879512 Msa0735520:intron 15.0%
!! GCTAAGAAATTAAATTAAAT+TGG - chr5_1:50879739-50879758 Msa0735520:intron 15.0%
!!! AACTTATTTTAACAATGTTT+TGG - chr5_1:50880457-50880476 Msa0735520:intron 15.0%
!!! TTTTACTTATAGGAAAAAAA+AGG + chr5_1:50880896-50880915 None:intergenic 15.0%
!! CATATTATTAGAATAGAAAA+TGG + chr5_1:50881735-50881754 None:intergenic 15.0%
!! GTAAAGTAAAACAAATTAAA+AGG + chr5_1:50882388-50882407 None:intergenic 15.0%
!!! CATTTTAATAATTCAAAATG+TGG - chr5_1:50882419-50882438 Msa0735520:CDS 15.0%
!! TCAACAAATATATCTATATT+TGG - chr5_1:50882642-50882661 Msa0735520:CDS 15.0%
!!! TTTTTTCTTGTTTGTGTTTT+GGG + chr5_1:50878466-50878485 None:intergenic 20.0%
!!! TTTTTTTCTTGTTTGTGTTT+TGG + chr5_1:50878467-50878486 None:intergenic 20.0%
!!! CAAAGTTTTGAGTATAATTA+TGG - chr5_1:50879159-50879178 Msa0735520:CDS 20.0%
!! AAAAGATGAAGAAAAAAACA+TGG + chr5_1:50879348-50879367 None:intergenic 20.0%
!!! TTATTATCCTTTTGCATTTT+TGG - chr5_1:50879374-50879393 Msa0735520:CDS 20.0%
!! AAAAAAAAACTTGTCATGTT+AGG + chr5_1:50879427-50879446 None:intergenic 20.0%
!!! TTCTTTTACATCTTTTGTTT+TGG - chr5_1:50879466-50879485 Msa0735520:intron 20.0%
!! ATTGGAATTATTATGTTAAC+AGG - chr5_1:50879757-50879776 Msa0735520:intron 20.0%
!!! ATGATTTTTTTTTTGCCTTA+AGG - chr5_1:50879976-50879995 Msa0735520:intron 20.0%
!! TAATAATTAATCTGACAAGA+AGG - chr5_1:50880114-50880133 Msa0735520:intron 20.0%
!!! ATTCCTTTTCTTTTCTTTAA+TGG + chr5_1:50880254-50880273 None:intergenic 20.0%
!! ACATAAGTATAGAGAAATTA+AGG - chr5_1:50880411-50880430 Msa0735520:intron 20.0%
!! TTAATCATTAATAAAGAGAG+AGG - chr5_1:50880544-50880563 Msa0735520:intron 20.0%
!!! AAGGATAAGATTTTACTTAT+AGG + chr5_1:50880906-50880925 None:intergenic 20.0%
!! GACAAATAAAAATGAACATA+AGG + chr5_1:50880925-50880944 None:intergenic 20.0%
!!! ATTCTTCACATTTTTTTGAA+AGG - chr5_1:50881007-50881026 Msa0735520:intron 20.0%
!!! AGAATTAGTTTGACTATAAT+GGG + chr5_1:50881321-50881340 None:intergenic 20.0%
!!! TAGAATTAGTTTGACTATAA+TGG + chr5_1:50881322-50881341 None:intergenic 20.0%
!! AATCAACATGTAACTTTATA+GGG + chr5_1:50881499-50881518 None:intergenic 20.0%
!! TAATCAACATGTAACTTTAT+AGG + chr5_1:50881500-50881519 None:intergenic 20.0%
!! ATATTTCATGCTTATCATTT+AGG + chr5_1:50881628-50881647 None:intergenic 20.0%
!! AAGACTAATTAAAATGATCT+TGG + chr5_1:50882354-50882373 None:intergenic 20.0%
!!! TTTTTCTTGTTTGTGTTTTG+GGG + chr5_1:50878465-50878484 None:intergenic 25.0%
! TTCAAAAAAGGTCTCAAAAT+AGG + chr5_1:50879195-50879214 None:intergenic 25.0%
!!! ATTTTGAGACCTTTTTTGAA+AGG - chr5_1:50879195-50879214 Msa0735520:CDS 25.0%
! TTCAAATAGCCTTTCAAAAA+AGG + chr5_1:50879207-50879226 None:intergenic 25.0%
!!! TTTTTTGAAAGGCTATTTGA+AGG - chr5_1:50879206-50879225 Msa0735520:CDS 25.0%
! AAACATGGTATATTCACAAA+AGG + chr5_1:50879333-50879352 None:intergenic 25.0%
! ATTCACAATCAATCCTAATA+TGG + chr5_1:50879509-50879528 None:intergenic 25.0%
! TTTAATAACATTTAAAGGGG+TGG - chr5_1:50879644-50879663 Msa0735520:intron 25.0%
! CTTCCATTAAAGAAAAGAAA+AGG - chr5_1:50880248-50880267 Msa0735520:intron 25.0%
! AAGAAAAGAAAAGGAATGTT+AGG - chr5_1:50880257-50880276 Msa0735520:intron 25.0%
! ACAATTTACTTACATGTGAA+GGG + chr5_1:50880302-50880321 None:intergenic 25.0%
! AACAATTTACTTACATGTGA+AGG + chr5_1:50880303-50880322 None:intergenic 25.0%
!! CACATGTAAGTAAATTGTTT+TGG - chr5_1:50880304-50880323 Msa0735520:intron 25.0%
!!! ATGTAAGTAAATTGTTTTGG+TGG - chr5_1:50880307-50880326 Msa0735520:intron 25.0%
! TAAGAAGTGAAATGATAAAG+AGG - chr5_1:50880345-50880364 Msa0735520:intron 25.0%
!!! AACAATGTTTTGGAAATACT+AGG - chr5_1:50880467-50880486 Msa0735520:intron 25.0%
! TAGGTTGTAGATACTATTAA+AGG - chr5_1:50880486-50880505 Msa0735520:intron 25.0%
! ATTAATAAAGAGAGAGGAAT+AGG - chr5_1:50880550-50880569 Msa0735520:intron 25.0%
!!! TGTTTTTGATGAAGTCAAAT+TGG - chr5_1:50881148-50881167 Msa0735520:intron 25.0%
!! GATTATTGTTTTCTCTTGAA+AGG + chr5_1:50881365-50881384 None:intergenic 25.0%
!!! TGTTGATTACTTGATTGTTT+TGG - chr5_1:50881511-50881530 Msa0735520:intron 25.0%
!! AAGTTCAAAGCTTTATACAT+GGG + chr5_1:50882513-50882532 None:intergenic 25.0%
!! AAAGTTCAAAGCTTTATACA+TGG + chr5_1:50882514-50882533 None:intergenic 25.0%
! CTATTGATCGAAGAATATTA+GGG + chr5_1:50882576-50882595 None:intergenic 25.0%
! ACTATTGATCGAAGAATATT+AGG + chr5_1:50882577-50882596 None:intergenic 25.0%
! TTTGGGGTAATTGAAATGTT+AGG + chr5_1:50878449-50878468 None:intergenic 30.0%
! GTAGTATTCGATATTTTCAC+AGG - chr5_1:50878820-50878839 Msa0735520:CDS 30.0%
! TTCGATATTTTCACAGGTAA+AGG - chr5_1:50878826-50878845 Msa0735520:CDS 30.0%
! ACAACTTTGTTTGTGAAGAA+CGG + chr5_1:50878916-50878935 None:intergenic 30.0%
GCTTTCAACTTCACAAATAA+AGG + chr5_1:50879111-50879130 None:intergenic 30.0%
CTATTTGAAGGTTTGTAAAG+AGG - chr5_1:50879218-50879237 Msa0735520:CDS 30.0%
TAGAATTTCAGAATGACACA+CGG + chr5_1:50879556-50879575 None:intergenic 30.0%
ATCAACATCGTAAAGTCAAA+TGG + chr5_1:50879621-50879640 None:intergenic 30.0%
AATTATTTGAAAGACCCACT+TGG - chr5_1:50879689-50879708 Msa0735520:intron 30.0%
!! ATGTGCTATTGATCACATTT+TGG - chr5_1:50879824-50879843 Msa0735520:intron 30.0%
! ATTTTGGATGCTCAAAAGAA+GGG - chr5_1:50879840-50879859 Msa0735520:intron 30.0%
GGCAAAAAAAAAATCATGCA+TGG + chr5_1:50879973-50879992 None:intergenic 30.0%
AATCATGTAACACTACCTTA+AGG + chr5_1:50879994-50880013 None:intergenic 30.0%
TAATTAATCTGACAAGAAGG+TGG - chr5_1:50880117-50880136 Msa0735520:intron 30.0%
TATTGTCAGAATGTAGTCAT+GGG - chr5_1:50880143-50880162 Msa0735520:intron 30.0%
CAATTTACTTACATGTGAAG+GGG + chr5_1:50880301-50880320 None:intergenic 30.0%
GTTGTAGATACTATTAAAGG+AGG - chr5_1:50880489-50880508 Msa0735520:intron 30.0%
TTGTTTGAGAACCAGAATAT+GGG + chr5_1:50880598-50880617 None:intergenic 30.0%
TTTGTTTGAGAACCAGAATA+TGG + chr5_1:50880599-50880618 None:intergenic 30.0%
GCAACAATAGAATTGAATGA+TGG + chr5_1:50880740-50880759 None:intergenic 30.0%
TTTATAAGCTTGTGAGCAAA+AGG - chr5_1:50880811-50880830 Msa0735520:intron 30.0%
TTATAAGCTTGTGAGCAAAA+GGG - chr5_1:50880812-50880831 Msa0735520:intron 30.0%
!! GATGACTCTAAAATATATCG+TGG - chr5_1:50881398-50881417 Msa0735520:intron 30.0%
!!! ACTTGATTGTTTTGGACTTT+TGG - chr5_1:50881519-50881538 Msa0735520:intron 30.0%
GAAAATGGCATAAGAACTAT+AGG + chr5_1:50881720-50881739 None:intergenic 30.0%
AACACTATGGTCAATTGAAT+GGG - chr5_1:50881777-50881796 Msa0735520:intron 30.0%
!!! TTACTTTGTTTTGGATGTCT+TGG + chr5_1:50881825-50881844 None:intergenic 30.0%
AAGACATCCAAAACAAAGTA+AGG - chr5_1:50881824-50881843 Msa0735520:intron 30.0%
AGACATCCAAAACAAAGTAA+GGG - chr5_1:50881825-50881844 Msa0735520:intron 30.0%
!! TTTCTTCCCTTACTTTGTTT+TGG + chr5_1:50881834-50881853 None:intergenic 30.0%
AAACAAAGTAAGGGAAGAAA+TGG - chr5_1:50881834-50881853 Msa0735520:intron 30.0%
!! AGCTTTGAACTTTGAAGTAA+TGG - chr5_1:50882521-50882540 Msa0735520:CDS 30.0%
! TTGAGTATCCTCTAAAAGTT+AGG + chr5_1:50882619-50882638 None:intergenic 30.0%
AAATGTTAGGAGTGGTTGTT+GGG + chr5_1:50878436-50878455 None:intergenic 35.0%
GGTAATTGAAATGTTAGGAG+TGG + chr5_1:50878444-50878463 None:intergenic 35.0%
CACAAAAACACACTCAACAA+TGG - chr5_1:50878489-50878508 Msa0735520:three_prime_UTR 35.0%
TTTGTTTGTGAAGAACGGAA+CGG + chr5_1:50878911-50878930 None:intergenic 35.0%
GTTGTTCAACAGTATCGTTA+CGG - chr5_1:50878931-50878950 Msa0735520:CDS 35.0%
TTGTTCAACAGTATCGTTAC+GGG - chr5_1:50878932-50878951 Msa0735520:CDS 35.0%
!! GTGAAGTTGAAAGCTTTGAA+TGG - chr5_1:50879117-50879136 Msa0735520:CDS 35.0%
!! TGAAAGCTTTGAATGGTGAA+AGG - chr5_1:50879124-50879143 Msa0735520:CDS 35.0%
GTAAAGAGGTTAAAGATCGT+AGG - chr5_1:50879232-50879251 Msa0735520:CDS 35.0%
GCACAAACCAAAAATGCAAA+AGG + chr5_1:50879384-50879403 None:intergenic 35.0%
! CATTTTGGATGCTCAAAAGA+AGG - chr5_1:50879839-50879858 Msa0735520:intron 35.0%
GTATTGTCAGAATGTAGTCA+TGG - chr5_1:50880142-50880161 Msa0735520:intron 35.0%
! CATTCAAATTGTTGGTGGAA+AGG + chr5_1:50880224-50880243 None:intergenic 35.0%
GAAGCTGTCATTCAAATTGT+TGG + chr5_1:50880232-50880251 None:intergenic 35.0%
TAACATTTCAGCCCATATTC+TGG - chr5_1:50880584-50880603 Msa0735520:intron 35.0%
TGGTTCTCAAACAAACAGTA+TGG - chr5_1:50880604-50880623 Msa0735520:intron 35.0%
AGTAAGAAGAATGAGTCCTA+TGG + chr5_1:50880638-50880657 None:intergenic 35.0%
TTGACCAAACTAAGTACACA+CGG + chr5_1:50880770-50880789 None:intergenic 35.0%
GTAGGTGCACCAATAAAATT+TGG + chr5_1:50881427-50881446 None:intergenic 35.0%
! CCATTTTATTGGAAGGTAGT+AGG + chr5_1:50881445-50881464 None:intergenic 35.0%
CCTACTACCTTCCAATAAAA+TGG - chr5_1:50881442-50881461 Msa0735520:intron 35.0%
ACTACCTTCCAATAAAATGG+TGG - chr5_1:50881445-50881464 Msa0735520:intron 35.0%
!! TTTGGTGACCACCATTTTAT+TGG + chr5_1:50881456-50881475 None:intergenic 35.0%
AAAATGGTGGTCACCAAATT+TGG - chr5_1:50881458-50881477 Msa0735520:intron 35.0%
CAACATGTAACTTTATAGGG+AGG + chr5_1:50881496-50881515 None:intergenic 35.0%
CGAGAAGAAAAGAAATCATG+TGG - chr5_1:50881568-50881587 Msa0735520:intron 35.0%
CAGCAATTGAAACAACACTA+TGG - chr5_1:50881764-50881783 Msa0735520:intron 35.0%
CAACACTATGGTCAATTGAA+TGG - chr5_1:50881776-50881795 Msa0735520:intron 35.0%
ACACTATGGTCAATTGAATG+GGG - chr5_1:50881778-50881797 Msa0735520:intron 35.0%
ATTGACCAATATCTTGCTCT+CGG + chr5_1:50882025-50882044 None:intergenic 35.0%
AGGCTAATGGAAATGACTTT+AGG - chr5_1:50882133-50882152 Msa0735520:CDS 35.0%
GTAAGGCAAGAATAATTCCA+GGG + chr5_1:50882191-50882210 None:intergenic 35.0%
CTATCCTTGGTATCACTATT+GGG - chr5_1:50882211-50882230 Msa0735520:CDS 35.0%
! AAGATTGACACTTCTGAGAA+AGG - chr5_1:50882279-50882298 Msa0735520:CDS 35.0%
! ATGTCTTATTAGCCTGCAAT+TGG - chr5_1:50882455-50882474 Msa0735520:CDS 35.0%
! TGTCTTATTAGCCTGCAATT+GGG - chr5_1:50882456-50882475 Msa0735520:CDS 35.0%
TTCTTCGATCAATAGTGTTC+TGG - chr5_1:50882581-50882600 Msa0735520:CDS 35.0%
GAAATGTTAGGAGTGGTTGT+TGG + chr5_1:50878437-50878456 None:intergenic 40.0%
!! CTAAAAGGGTCTTTTCAAGG+AGG + chr5_1:50878522-50878541 None:intergenic 40.0%
!!! ACGGAGTTTTGAGATTGTGA+CGG + chr5_1:50878569-50878588 None:intergenic 40.0%
TGAAATCTTCCTCCTACGTA+TGG - chr5_1:50878705-50878724 Msa0735520:three_prime_UTR 40.0%
GAAATCTTCCTCCTACGTAT+GGG - chr5_1:50878706-50878725 Msa0735520:three_prime_UTR 40.0%
!! CACACACAAGGTGTTGAATT+CGG - chr5_1:50878781-50878800 Msa0735520:three_prime_UTR 40.0%
! GTGTTGGTGGGATTGTTATA+AGG - chr5_1:50879010-50879029 Msa0735520:CDS 40.0%
GTGGGATTGTTATAAGGAAG+AGG - chr5_1:50879016-50879035 Msa0735520:CDS 40.0%
CATGTTAGGAATGAGACATG+TGG + chr5_1:50879413-50879432 None:intergenic 40.0%
! TTTTAGTCCATCATTGCTCG+TGG + chr5_1:50879805-50879824 None:intergenic 40.0%
GTTGAGAACATCAATGTTGC+TGG - chr5_1:50879894-50879913 Msa0735520:intron 40.0%
! CAAATTGTTGGTGGAAAGGA+AGG + chr5_1:50880220-50880239 None:intergenic 40.0%
GCTGTCATTCAAATTGTTGG+TGG + chr5_1:50880229-50880248 None:intergenic 40.0%
TCAAACAAACAGTATGGCCA+TGG - chr5_1:50880610-50880629 Msa0735520:intron 40.0%
CAAACAAACAGTATGGCCAT+GGG - chr5_1:50880611-50880630 Msa0735520:intron 40.0%
AAACAAACAGTATGGCCATG+GGG - chr5_1:50880612-50880631 Msa0735520:intron 40.0%
!!! TGTTGACTCCTTCAGTTTTG+AGG - chr5_1:50880681-50880700 Msa0735520:intron 40.0%
AACCAGTACCTCAAAACTGA+AGG + chr5_1:50880692-50880711 None:intergenic 40.0%
!!! TTCAGTTTTGAGGTACTGGT+TGG - chr5_1:50880691-50880710 Msa0735520:intron 40.0%
!! AGGTACTGGTTGGATCTATA+TGG - chr5_1:50880701-50880720 Msa0735520:intron 40.0%
!! GGTACTGGTTGGATCTATAT+GGG - chr5_1:50880702-50880721 Msa0735520:intron 40.0%
!! GTACTGGTTGGATCTATATG+GGG - chr5_1:50880703-50880722 Msa0735520:intron 40.0%
! TCGTGGCCACCAAATTTTAT+TGG - chr5_1:50881415-50881434 Msa0735520:intron 40.0%
GGTGCACCAATAAAATTTGG+TGG + chr5_1:50881424-50881443 None:intergenic 40.0%
! GTGACCACCATTTTATTGGA+AGG + chr5_1:50881452-50881471 None:intergenic 40.0%
!!! CTTTGTTTTGGATGTCTTGG+TGG + chr5_1:50881822-50881841 None:intergenic 40.0%
GAAGAAATGGACAGAGTTCT+TGG - chr5_1:50881847-50881866 Msa0735520:intron 40.0%
TTGATCACAGCTTGTAGGTA+AGG + chr5_1:50881913-50881932 None:intergenic 40.0%
TCTCTTTGATCACAGCTTGT+AGG + chr5_1:50881918-50881937 None:intergenic 40.0%
CATCATGAAGGTTCATGTGT+GGG + chr5_1:50881975-50881994 None:intergenic 40.0%
CATTGAGCTTTGCATCATGA+AGG + chr5_1:50881987-50882006 None:intergenic 40.0%
CTTCATGATGCAAAGCTCAA+TGG - chr5_1:50881985-50882004 Msa0735520:CDS 40.0%
GCAAGATATTGGTCAATGCA+TGG - chr5_1:50882028-50882047 Msa0735520:CDS 40.0%
AGATATTGGTCAATGCATGG+TGG - chr5_1:50882031-50882050 Msa0735520:CDS 40.0%
GACTTTAGGTACCTTCCTTT+CGG - chr5_1:50882147-50882166 Msa0735520:CDS 40.0%
GGTAAGGCAAGAATAATTCC+AGG + chr5_1:50882192-50882211 None:intergenic 40.0%
ATTCTTGCCTTACCTATCCT+TGG - chr5_1:50882198-50882217 Msa0735520:CDS 40.0%
AGTGATACCAAGGATAGGTA+AGG + chr5_1:50882208-50882227 None:intergenic 40.0%
CCAATAGTGATACCAAGGAT+AGG + chr5_1:50882213-50882232 None:intergenic 40.0%
CCTATCCTTGGTATCACTAT+TGG - chr5_1:50882210-50882229 Msa0735520:CDS 40.0%
TCAATCTTTGATTGTCCTGG+TGG + chr5_1:50882267-50882286 None:intergenic 40.0%
GTGTCAATCTTTGATTGTCC+TGG + chr5_1:50882270-50882289 None:intergenic 40.0%
! ATTGACACTTCTGAGAAAGG+AGG - chr5_1:50882282-50882301 Msa0735520:CDS 40.0%
TGATCTTGGCTTAGCAACAA+TGG + chr5_1:50882340-50882359 None:intergenic 40.0%
! TTATTAGCCTGCAATTGGGT+AGG - chr5_1:50882460-50882479 Msa0735520:CDS 40.0%
TTATTCACCTACCCAATTGC+AGG + chr5_1:50882470-50882489 None:intergenic 40.0%
! TGTCAGTGCCTAACTTTTAG+AGG - chr5_1:50882608-50882627 Msa0735520:CDS 40.0%
! GGGCTAAAAGGGTCTTTTCA+AGG + chr5_1:50878525-50878544 None:intergenic 45.0%
GTCACAATCTCAAAACTCCG+TGG - chr5_1:50878568-50878587 Msa0735520:three_prime_UTR 45.0%
AGTTACCGAAGATAGGGACT+GGG + chr5_1:50878624-50878643 None:intergenic 45.0%
GAAGCCAGTTACCGAAGATA+GGG + chr5_1:50878630-50878649 None:intergenic 45.0%
TGAAGCCAGTTACCGAAGAT+AGG + chr5_1:50878631-50878650 None:intergenic 45.0%
! TTCGGTAACTGGCTTCAAGT+CGG - chr5_1:50878634-50878653 Msa0735520:three_prime_UTR 45.0%
! GAAGATTTCACCGAAGCGTT+TGG + chr5_1:50878695-50878714 None:intergenic 45.0%
TTGTGTGTGGAGGACTTCTT+TGG + chr5_1:50878770-50878789 None:intergenic 45.0%
AAAGAAGTCCTCCACACACA+AGG - chr5_1:50878769-50878788 Msa0735520:three_prime_UTR 45.0%
ATTCAACACCTTGTGTGTGG+AGG + chr5_1:50878780-50878799 None:intergenic 45.0%
CGAATTCAACACCTTGTGTG+TGG + chr5_1:50878783-50878802 None:intergenic 45.0%
CACAGGTAAAGGACAAGACA+TGG - chr5_1:50878837-50878856 Msa0735520:CDS 45.0%
GACATGGTGTTCACTGTCTA+CGG - chr5_1:50878853-50878872 Msa0735520:CDS 45.0%
TTCAACAGTATCGTTACGGG+TGG - chr5_1:50878935-50878954 Msa0735520:CDS 45.0%
TCAACAGTATCGTTACGGGT+GGG - chr5_1:50878936-50878955 Msa0735520:CDS 45.0%
GAATGGTGAAAGGAGTCGTT+TGG - chr5_1:50879134-50879153 Msa0735520:CDS 45.0%
GGAATGAGACATGTGGTACA+CGG + chr5_1:50879406-50879425 None:intergenic 45.0%
ATCCCAAGTAAGTGCCAAGT+GGG + chr5_1:50879706-50879725 None:intergenic 45.0%
! TTGTTGGTGGAAAGGAAGGT+CGG + chr5_1:50880216-50880235 None:intergenic 45.0%
!!! CTCCTTCAGTTTTGAGGTAC+TGG - chr5_1:50880687-50880706 Msa0735520:intron 45.0%
TGGTGGTCACCAAATTTGGT+TGG - chr5_1:50881462-50881481 Msa0735520:intron 45.0%
GCAGTTGCACCAACCAAATT+TGG + chr5_1:50881474-50881493 None:intergenic 45.0%
! TAAGGTAGCTTGTGGAGATC+TGG + chr5_1:50881895-50881914 None:intergenic 45.0%
CTTGTAGGTAAGGTAGCTTG+TGG + chr5_1:50881903-50881922 None:intergenic 45.0%
AGAGACACTTCGTCTACGAA+TGG - chr5_1:50881933-50881952 Msa0735520:CDS 45.0%
GCATCATGAAGGTTCATGTG+TGG + chr5_1:50881976-50881995 None:intergenic 45.0%
GAGTCTCATGTTGAGGCTAA+TGG - chr5_1:50882120-50882139 Msa0735520:CDS 45.0%
TTCTACCAACACCGAAAGGA+AGG + chr5_1:50882161-50882180 None:intergenic 45.0%
CTTCTTCTACCAACACCGAA+AGG + chr5_1:50882165-50882184 None:intergenic 45.0%
ATCTTTGATTGTCCTGGTGG+AGG + chr5_1:50882264-50882283 None:intergenic 45.0%
!!! ATTATTTTAATAACATTTAA+AGG - chr5_1:50879639-50879658 Msa0735520:intron 5.0%
!!! TTATTTTAATAACATTTAAA+GGG - chr5_1:50879640-50879659 Msa0735520:intron 5.0%
!!! ATATTTTAAAGTTTTTTTTA+GGG + chr5_1:50881106-50881125 None:intergenic 5.0%
!!! TATATTTTAAAGTTTTTTTT+AGG + chr5_1:50881107-50881126 None:intergenic 5.0%
!!! TATATTTTAGTAAAAAATAT+TGG - chr5_1:50881125-50881144 Msa0735520:intron 5.0%
!!! TTTTATTATTATTAAAGTTT+AGG + chr5_1:50881670-50881689 None:intergenic 5.0%
GGCGATGAAGAGGGCTAAAA+GGG + chr5_1:50878536-50878555 None:intergenic 50.0%
TGAGATTGTGACGGCGATTG+TGG + chr5_1:50878560-50878579 None:intergenic 50.0%
! GGAGTTTGAAGCGTTTGCCA+CGG + chr5_1:50878588-50878607 None:intergenic 50.0%
AAACGCTTCAAACTCCCACC+AGG - chr5_1:50878592-50878611 Msa0735520:three_prime_UTR 50.0%
CCAATCCCAGTCCCTATCTT+CGG - chr5_1:50878616-50878635 Msa0735520:three_prime_UTR 50.0%
CAGTTACCGAAGATAGGGAC+TGG + chr5_1:50878625-50878644 None:intergenic 50.0%
CAGTCCCTATCTTCGGTAAC+TGG - chr5_1:50878623-50878642 Msa0735520:three_prime_UTR 50.0%
TGGCGTAATCGGTGAGGTTA+CGG + chr5_1:50878675-50878694 None:intergenic 50.0%
ACCGATTACGCCAAACGCTT+CGG - chr5_1:50878682-50878701 Msa0735520:three_prime_UTR 50.0%
! ACCGAAGCGTTTGGCGTAAT+CGG + chr5_1:50878686-50878705 None:intergenic 50.0%
TACGTTGTCCCATACGTAGG+AGG + chr5_1:50878717-50878736 None:intergenic 50.0%
GGTTACGTTGTCCCATACGT+AGG + chr5_1:50878720-50878739 None:intergenic 50.0%
CTGGGGAAGAAACTACGACT+AGG + chr5_1:50878741-50878760 None:intergenic 50.0%
GACTTCTTTGGCGAGTTCTG+GGG + chr5_1:50878758-50878777 None:intergenic 50.0%
GGACTTCTTTGGCGAGTTCT+GGG + chr5_1:50878759-50878778 None:intergenic 50.0%
AGGACTTCTTTGGCGAGTTC+TGG + chr5_1:50878760-50878779 None:intergenic 50.0%
TCACTGTCTACGGCGAACAT+TGG - chr5_1:50878863-50878882 Msa0735520:CDS 50.0%
AACAACGCTGAAGCGAGTGT+TGG - chr5_1:50878994-50879013 Msa0735520:CDS 50.0%
AGACCCACTTGGCACTTACT+TGG - chr5_1:50879700-50879719 Msa0735520:intron 50.0%
GACCCACTTGGCACTTACTT+GGG - chr5_1:50879701-50879720 Msa0735520:intron 50.0%
CATCCCAAGTAAGTGCCAAG+TGG + chr5_1:50879707-50879726 None:intergenic 50.0%
ATCATTGCTCGTGGTGCTCT+TGG + chr5_1:50879796-50879815 None:intergenic 50.0%
!! AAGAGCACCACGAGCAATGA+TGG - chr5_1:50879795-50879814 Msa0735520:intron 50.0%
CGTGCCGTGTGTACTTAGTT+TGG - chr5_1:50880763-50880782 Msa0735520:intron 50.0%
ATGGACAGAGTTCTTGGACC+AGG - chr5_1:50881853-50881872 Msa0735520:intron 50.0%
! GGAGATCTGGCTCAGTTACT+TGG + chr5_1:50881882-50881901 None:intergenic 50.0%
CCAATATCTTGCTCTCGGCA+GGG + chr5_1:50882020-50882039 None:intergenic 50.0%
ACCAATATCTTGCTCTCGGC+AGG + chr5_1:50882021-50882040 None:intergenic 50.0%
! ATGGTGGCTTGCAAACAACC+CGG - chr5_1:50882047-50882066 Msa0735520:CDS 50.0%
GGAAAAAGCCGGAGGAATTC+AGG - chr5_1:50882076-50882095 Msa0735520:CDS 50.0%
TCTTCCTCCAAGAACCGTTC+GGG + chr5_1:50882102-50882121 None:intergenic 50.0%
CTCTTCCTCCAAGAACCGTT+CGG + chr5_1:50882103-50882122 None:intergenic 50.0%
GGAGGAAGAGTCTCATGTTG+AGG - chr5_1:50882113-50882132 Msa0735520:CDS 50.0%
! AGGTACCTTCCTTTCGGTGT+TGG - chr5_1:50882153-50882172 Msa0735520:CDS 50.0%
! GTTGGTAGAAGAAGTTGCCC+TGG - chr5_1:50882171-50882190 Msa0735520:CDS 50.0%
GACGCCCAATAGTGATACCA+AGG + chr5_1:50882218-50882237 None:intergenic 50.0%
TGGTATCACTATTGGGCGTC+TGG - chr5_1:50882218-50882237 Msa0735520:CDS 50.0%
CGGCGATGAAGAGGGCTAAA+AGG + chr5_1:50878537-50878556 None:intergenic 55.0%
GATTGTGGCGGCGATGAAGA+GGG + chr5_1:50878545-50878564 None:intergenic 55.0%
GATTGTGACGGCGATTGTGG+CGG + chr5_1:50878557-50878576 None:intergenic 55.0%
ATAGGGACTGGGATTGGACC+TGG + chr5_1:50878613-50878632 None:intergenic 55.0%
CCGAAGATAGGGACTGGGAT+TGG + chr5_1:50878619-50878638 None:intergenic 55.0%
CGTAATCGGTGAGGTTACGG+TGG + chr5_1:50878672-50878691 None:intergenic 55.0%
AGCGTTTGGCGTAATCGGTG+AGG + chr5_1:50878681-50878700 None:intergenic 55.0%
!! AACGCTGAAGCGAGTGTTGG+TGG - chr5_1:50878997-50879016 Msa0735520:CDS 55.0%
!! ACGCTGAAGCGAGTGTTGGT+GGG - chr5_1:50878998-50879017 Msa0735520:CDS 55.0%
TTGGTGGAAAGGAAGGTCGG+CGG + chr5_1:50880213-50880232 None:intergenic 55.0%
GAATGAGTCCTATGGCCCCA+TGG + chr5_1:50880630-50880649 None:intergenic 55.0%
!! GGCTCAGTTACTTGGTGTCC+TGG + chr5_1:50881874-50881893 None:intergenic 55.0%
TCATGTGTGGGACGAGGAGT+GGG + chr5_1:50881963-50881982 None:intergenic 55.0%
TTCATGTGTGGGACGAGGAG+TGG + chr5_1:50881964-50881983 None:intergenic 55.0%
GAAGGTTCATGTGTGGGACG+AGG + chr5_1:50881969-50881988 None:intergenic 55.0%
CCCTGCCGAGAGCAAGATAT+TGG - chr5_1:50882017-50882036 Msa0735520:CDS 55.0%
TTGCAAACAACCCGGCTCAC+TGG - chr5_1:50882055-50882074 Msa0735520:CDS 55.0%
!! TCCGGCTTTTTCCAGTGAGC+CGG + chr5_1:50882069-50882088 None:intergenic 55.0%
ATTCAGGCCCGAACGGTTCT+TGG - chr5_1:50882092-50882111 Msa0735520:CDS 55.0%
! TTCGAGCTTTTGCCTCCACC+AGG - chr5_1:50882249-50882268 Msa0735520:CDS 55.0%
CGATTGTGGCGGCGATGAAG+AGG + chr5_1:50878546-50878565 None:intergenic 60.0%
GGACTGGGATTGGACCTGGT+GGG + chr5_1:50878609-50878628 None:intergenic 60.0%
CAGTATGGCCATGGGGCCAT+AGG - chr5_1:50880619-50880638 Msa0735520:intron 60.0%
!! CCGGCTTTTTCCAGTGAGCC+GGG + chr5_1:50882068-50882087 None:intergenic 60.0%
CCCGGCTCACTGGAAAAAGC+CGG - chr5_1:50882065-50882084 Msa0735520:CDS 60.0%
GGCTCACTGGAAAAAGCCGG+AGG - chr5_1:50882068-50882087 Msa0735520:CDS 60.0%
CGTTCGGGCCTGAATTCCTC+CGG + chr5_1:50882087-50882106 None:intergenic 60.0%
CGGAGGAATTCAGGCCCGAA+CGG - chr5_1:50882085-50882104 Msa0735520:CDS 60.0%
GGGACTGGGATTGGACCTGG+TGG + chr5_1:50878610-50878629 None:intergenic 65.0%
CAGGCCCGAACGGTTCTTGG+AGG - chr5_1:50882095-50882114 Msa0735520:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 50878428 50882744 50878428 ID=Msa0735520;Name=Msa0735520
chr5_1 mRNA 50878428 50882744 50878428 ID=Msa0735520-mRNA-1;Parent=Msa0735520;Name=Msa0735520-mRNA-1;_AED=0.03;_eAED=0.03;_QI=80|1|1|1|1|1|3|379|506
chr5_1 exon 50878428 50879405 50878428 ID=Msa0735520-mRNA-1:exon:14340;Parent=Msa0735520-mRNA-1
chr5_1 exon 50881257 50881393 50881257 ID=Msa0735520-mRNA-1:exon:14339;Parent=Msa0735520-mRNA-1
chr5_1 exon 50881880 50882744 50881880 ID=Msa0735520-mRNA-1:exon:14338;Parent=Msa0735520-mRNA-1
chr5_1 five_prime_UTR 50882665 50882744 50882665 ID=Msa0735520-mRNA-1:five_prime_utr;Parent=Msa0735520-mRNA-1
chr5_1 CDS 50881880 50882664 50881880 ID=Msa0735520-mRNA-1:cds;Parent=Msa0735520-mRNA-1
chr5_1 CDS 50881257 50881393 50881257 ID=Msa0735520-mRNA-1:cds;Parent=Msa0735520-mRNA-1
chr5_1 CDS 50878807 50879405 50878807 ID=Msa0735520-mRNA-1:cds;Parent=Msa0735520-mRNA-1
chr5_1 three_prime_UTR 50878428 50878806 50878428 ID=Msa0735520-mRNA-1:three_prime_utr;Parent=Msa0735520-mRNA-1
Gene Sequence

>Msa0735520

ATGGATCTTCTCCTCCTTGAAAAGACCCTTTTAGCCCTCTTCATCGCCGCCACAATCGCCGTCACAATCTCAAAACTCCGTGGCAAACGCTTCAAACTCCCACCAGGTCCAATCCCAGTCCCTATCTTCGGTAACTGGCTTCAAGTCGGAGATGATCTCAACCACCGTAACCTCACCGATTACGCCAAACGCTTCGGTGAAATCTTCCTCCTACGTATGGGACAACGTAACCTAGTCGTAGTTTCTTCCCCAGAACTCGCCAAAGAAGTCCTCCACACACAAGGTGTTGAATTCGGATCACGTACACGTAACGTAGTATTCGATATTTTCACAGGTAAAGGACAAGACATGGTGTTCACTGTCTACGGCGAACATTGGCGTAAAATGCGTAGAATCATGACCGTTCCGTTCTTCACAAACAAAGTTGTTCAACAGTATCGTTACGGGTGGGAATCTGAAGCTGAGAGTGTTGTTAACGATGTTAAGAACAACGCTGAAGCGAGTGTTGGTGGGATTGTTATAAGGAAGAGGTTGCAGTTGATGATGTATAATATAATGTATAGGATTATGTTTGATAGAAGATTTGAGAGTGAAGAAGATCCTTTATTTGTGAAGTTGAAAGCTTTGAATGGTGAAAGGAGTCGTTTGGCTCAAAGTTTTGAGTATAATTATGGTGATTTTATTCCTATTTTGAGACCTTTTTTGAAAGGCTATTTGAAGGTTTGTAAAGAGGTTAAAGATCGTAGGTTGCAGCTTTTCAAAGACTATTTTGTTGATGAAAGAAAGAAGCTTGAAAGCACCAAGAGCACCACGAGCAATGATGGACTAAAATGTGCTATTGATCACATTTTGGATGCTCAAAAGAAGGGTGAAATCAATGATGACAACGTTCTTTACATTGTTGAGAACATCAATGTTGCTGCAATTGAAACAACACTATGGTCAATTGAATGGGGAATTGCTGAGCTAGTGAACCACCAAGACATCCAAAACAAAGTAAGGGAAGAAATGGACAGAGTTCTTGGACCAGGACACCAAGTAACTGAGCCAGATCTCCACAAGCTACCTTACCTACAAGCTGTGATCAAAGAGACACTTCGTCTACGAATGGCGATCCCACTCCTCGTCCCACACATGAACCTTCATGATGCAAAGCTCAATGGTTTCGATATCCCTGCCGAGAGCAAGATATTGGTCAATGCATGGTGGCTTGCAAACAACCCGGCTCACTGGAAAAAGCCGGAGGAATTCAGGCCCGAACGGTTCTTGGAGGAAGAGTCTCATGTTGAGGCTAATGGAAATGACTTTAGGTACCTTCCTTTCGGTGTTGGTAGAAGAAGTTGCCCTGGAATTATTCTTGCCTTACCTATCCTTGGTATCACTATTGGGCGTCTGGTTCAGAATTTCGAGCTTTTGCCTCCACCAGGACAATCAAAGATTGACACTTCTGAGAAAGGAGGACAGTTTAGTCTGCATATACTCAAACATTCAACCATTGTTGCTAAGCCAAGATCATTTTAA
Protein sequence

>Msa0735520

MDLLLLEKTLLALFIAATIAVTISKLRGKRFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDYAKRFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWESEAESVVNDVKNNAEASVGGIVIRKRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKVCKEVKDRRLQLFKDYFVDERKKLESTKSTTSNDGLKCAIDHILDAQKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQDIQNKVREEMDRVLGPGHQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLNGFDIPAESKILVNAWWLANNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF*