AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0695140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0695140 MtrunA17_Chr4g0052521 99.294 992 7 0 1 992 1 992 0.0 2002
Msa0695140 MtrunA17_Chr2g0297051 81.500 1000 162 6 5 991 41 1030 0.0 1618
Msa0695140 MtrunA17_Chr5g0397621 49.280 903 429 9 93 989 14 893 0.0 838
Msa0695140 MtrunA17_Chr8g0339181 47.071 973 478 13 19 981 6 951 0.0 798
Msa0695140 MtrunA17_Chr8g0374321 43.711 636 349 5 45 676 59 689 2.09e-175 528
Msa0695140 MtrunA17_Chr8g0374321 30.675 163 96 4 108 255 30 190 6.16e-14 76.3
Msa0695140 MtrunA17_Chr3g0136331 35.634 710 393 14 302 981 210 885 2.95e-121 392
Msa0695140 MtrunA17_Chr4g0050431 37.926 675 360 13 340 990 285 924 4.33e-121 392
Msa0695140 MtrunA17_Chr8g0374331 60.331 242 96 0 748 989 1 242 1.46e-90 288
Msa0695140 MtrunA17_Chr8g0374391 60.000 235 94 0 755 989 1 235 2.11e-86 277
Msa0695140 MtrunA17_Chr2g0297871 33.811 488 278 13 460 940 63 512 6.50e-72 252
Msa0695140 MtrunA17_Chr4g0071991 27.577 747 418 23 203 930 17 659 2.74e-69 251
Msa0695140 MtrunA17_Chr8g0374371 56.684 187 80 1 425 610 1 187 3.81e-67 224
Msa0695140 MtrunA17_Chr4g0053441 25.743 707 406 21 296 956 136 769 6.25e-39 156
Msa0695140 MtrunA17_Chr4g0072131 22.801 614 362 20 429 973 135 705 4.65e-23 106
Msa0695140 MtrunA17_Chr2g0298031 22.680 582 343 19 429 948 137 673 3.56e-22 103
Msa0695140 MtrunA17_Chr3g0138931 21.793 569 363 12 429 948 132 667 3.82e-22 103
Msa0695140 MtrunA17_Chr8g0365021 22.262 557 334 16 439 934 208 726 2.14e-21 100
Msa0695140 MtrunA17_Chr6g0456201 22.813 583 334 19 465 937 245 821 3.42e-21 100
Msa0695140 MtrunA17_Chr1g0148031 21.762 579 351 15 429 948 132 667 6.43e-21 99.4
Msa0695140 MtrunA17_Chr7g0263361 31.282 195 100 4 788 950 625 817 1.57e-20 98.2
Msa0695140 MtrunA17_Chr4g0059961 22.442 606 358 18 439 973 142 706 5.13e-20 96.3
Msa0695140 MtrunA17_Chr6g0452721 22.442 557 333 15 439 934 140 658 6.45e-20 95.9
Msa0695140 MtrunA17_Chr7g0260401 23.191 608 355 17 439 937 250 854 1.94e-19 94.4
Msa0695140 MtrunA17_Chr1g0147981 21.903 557 336 17 439 934 155 673 2.55e-19 94.0
Msa0695140 MtrunA17_Chr8g0335291 22.302 556 334 16 439 934 146 663 4.15e-19 93.2
Msa0695140 MtrunA17_Chr8g0340261 30.500 200 105 5 772 937 174 373 1.15e-18 90.9
Msa0695140 MtrunA17_Chr8g0346461 29.282 181 94 3 788 934 618 798 2.35e-18 90.9
Msa0695140 MtrunA17_Chr2g0304941 21.770 565 343 16 429 934 133 657 2.36e-18 90.9
Msa0695140 MtrunA17_Chr4g0065481 21.326 558 354 19 429 934 133 657 6.14e-18 89.4
Msa0695140 MtrunA17_Chr2g0333721 20.885 565 348 13 429 934 130 654 6.87e-18 89.4
Msa0695140 MtrunA17_Chr5g0401211 32.402 179 92 3 790 939 649 827 1.12e-17 88.6
Msa0695140 MtrunA17_Chr2g0298871 28.962 183 97 2 788 937 695 877 4.50e-17 86.7
Msa0695140 MtrunA17_Chr4g0020551 30.508 177 95 3 789 937 584 760 5.74e-17 86.3
Msa0695140 MtrunA17_Chr8g0382071 32.022 178 92 5 789 937 648 825 7.56e-17 85.9
Msa0695140 MtrunA17_Chr4g0054021 30.168 179 96 3 790 939 572 750 2.54e-16 84.3
Msa0695140 MtrunA17_Chr3g0134771 28.283 198 113 4 771 939 632 829 5.55e-16 83.2
Msa0695140 MtrunA17_Chr7g0276551 24.603 378 221 11 610 934 55 421 1.32e-15 81.6
Msa0695140 MtrunA17_Chr8g0355421 32.044 181 92 5 789 939 639 818 1.36e-15 82.0
Msa0695140 MtrunA17_Chr1g0173111 31.319 182 95 6 786 937 641 822 2.32e-15 81.3
Msa0695140 MtrunA17_Chr3g0134951 27.119 177 98 1 789 934 583 759 9.23e-15 79.3
Msa0695140 MtrunA17_Chr4g0002331 27.322 183 100 3 788 937 708 890 1.89e-14 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0695140 AT5G44790.1 72.890 1007 246 6 1 989 1 998 0.0 1465
Msa0695140 AT1G63440.1 47.510 964 474 9 35 989 47 987 0.0 868
Msa0695140 AT1G63440.1 29.762 168 109 3 19 186 109 267 3.16e-12 71.6
Msa0695140 AT5G21930.2 36.919 688 378 15 323 979 213 875 7.12e-121 391
Msa0695140 AT5G21930.1 36.919 688 378 15 323 979 213 875 7.12e-121 391
Msa0695140 AT4G33520.2 36.351 696 380 13 300 979 270 918 1.73e-113 373
Msa0695140 AT4G33520.3 36.351 696 380 13 300 979 270 918 1.93e-113 372
Msa0695140 AT5G21930.3 35.610 688 364 16 323 979 213 852 4.29e-109 358
Msa0695140 AT5G21930.4 36.076 632 344 16 323 923 213 815 8.81e-99 330
Msa0695140 AT4G30110.1 28.070 741 422 20 203 930 13 655 9.36e-73 260
Msa0695140 AT4G30110.2 28.070 741 422 20 203 930 13 655 9.36e-73 260
Msa0695140 AT2G19110.2 26.256 796 458 22 203 980 23 707 3.00e-62 231
Msa0695140 AT2G19110.3 26.256 796 458 22 203 980 23 707 3.00e-62 231
Msa0695140 AT2G19110.1 26.256 796 458 22 203 980 23 707 3.00e-62 231
Msa0695140 AT4G30120.2 30.707 368 215 6 393 759 4 332 5.05e-44 164
Msa0695140 AT4G30120.1 27.240 558 320 15 203 759 19 491 2.36e-43 166
Msa0695140 AT4G37270.1 26.418 617 360 15 356 930 181 745 1.74e-34 142
Msa0695140 AT3G57330.2 25.214 583 347 17 439 937 184 761 3.14e-27 120
Msa0695140 AT2G41560.2 25.293 597 344 17 433 937 131 717 3.25e-27 119
Msa0695140 AT2G41560.3 25.293 597 344 17 433 937 131 717 3.25e-27 119
Msa0695140 AT2G41560.4 25.293 597 344 17 433 937 131 717 3.25e-27 119
Msa0695140 AT3G57330.1 25.214 583 347 17 439 937 239 816 4.74e-27 119
Msa0695140 AT2G41560.1 25.293 597 344 17 433 937 233 819 5.28e-27 119
Msa0695140 AT2G24520.3 24.691 567 340 15 437 948 113 647 4.31e-23 106
Msa0695140 AT2G24520.1 24.691 567 340 15 437 948 113 647 4.31e-23 106
Msa0695140 AT2G24520.2 24.691 567 340 15 437 948 176 710 4.94e-23 106
Msa0695140 AT1G80660.2 22.378 572 335 16 427 934 4 530 1.46e-21 101
Msa0695140 AT1G80660.3 22.281 570 334 16 429 934 135 659 3.36e-21 100
Msa0695140 AT1G80660.4 22.281 570 334 16 429 934 135 659 3.54e-21 100
Msa0695140 AT1G80660.1 22.281 570 334 16 429 934 135 659 4.16e-21 100
Msa0695140 AT3G60330.4 23.285 554 336 14 437 934 134 654 5.36e-21 99.8
Msa0695140 AT3G60330.3 23.285 554 336 14 437 934 134 654 5.36e-21 99.8
Msa0695140 AT3G60330.2 23.105 554 337 14 437 934 134 654 1.04e-20 99.0
Msa0695140 AT3G60330.1 23.105 554 337 14 437 934 134 654 1.04e-20 99.0
Msa0695140 AT1G17260.1 22.000 550 343 15 439 934 144 661 2.15e-20 97.8
Msa0695140 AT4G30190.1 22.261 566 339 16 429 934 130 654 3.14e-20 97.4
Msa0695140 AT5G57350.4 22.632 570 332 16 429 934 131 655 3.45e-20 97.4
Msa0695140 AT5G57350.2 22.632 570 332 16 429 934 131 655 3.45e-20 97.4
Msa0695140 AT5G57350.1 22.632 570 332 16 429 934 131 655 3.45e-20 97.4
Msa0695140 AT2G07560.1 22.301 565 339 17 429 934 133 656 5.48e-20 96.7
Msa0695140 AT3G22910.1 23.283 597 356 16 439 939 229 819 7.01e-20 96.3
Msa0695140 AT1G07670.2 30.693 202 102 5 783 950 615 812 1.09e-19 95.9
Msa0695140 AT1G07670.1 30.693 202 102 5 783 950 615 812 1.09e-19 95.9
Msa0695140 AT1G07810.1 30.198 202 103 5 783 950 615 812 1.46e-19 95.5
Msa0695140 AT3G47950.1 21.951 615 350 17 439 973 144 708 3.85e-19 94.0
Msa0695140 AT3G47950.2 21.951 615 350 17 439 973 144 708 3.85e-19 94.0
Msa0695140 AT5G62670.1 21.818 605 363 18 439 973 140 704 4.79e-19 93.6
Msa0695140 AT2G18960.1 21.770 565 343 16 429 934 130 654 4.11e-18 90.5
Msa0695140 AT4G00900.2 29.032 186 98 4 783 934 609 794 5.85e-18 90.1
Msa0695140 AT4G00900.1 29.032 186 98 4 783 934 609 794 5.85e-18 90.1
Msa0695140 AT2G18960.3 21.968 569 337 18 429 934 66 590 5.99e-18 90.1
Msa0695140 AT2G18960.2 21.968 569 337 18 429 934 66 590 5.99e-18 90.1
Msa0695140 AT3G42640.1 22.144 569 336 16 429 934 133 657 1.37e-17 89.0
Msa0695140 AT4G29900.1 27.037 270 141 7 701 937 613 859 6.31e-17 86.7
Msa0695140 AT4G29900.2 27.037 270 141 7 701 937 613 859 6.31e-17 86.7
Msa0695140 AT4G37640.1 30.168 179 96 3 790 939 649 827 6.62e-17 86.7
Msa0695140 AT3G63380.1 29.670 182 95 2 789 937 640 821 2.90e-16 84.7
Msa0695140 AT2G22950.1 30.168 179 96 3 790 939 650 828 4.25e-16 84.0
Msa0695140 AT5G57110.1 28.415 183 98 2 788 937 673 855 8.71e-16 83.2
Msa0695140 AT5G57110.3 28.415 183 98 2 788 937 673 855 8.71e-16 83.2
Msa0695140 AT5G57110.2 28.415 183 98 2 788 937 673 855 8.71e-16 83.2
Msa0695140 AT1G10130.1 27.684 177 97 1 789 934 582 758 1.16e-15 82.8
Msa0695140 AT3G21180.1 23.154 596 327 21 458 937 292 872 1.25e-15 82.4
Msa0695140 AT2G24520.4 23.724 392 233 8 610 948 26 404 1.35e-15 82.0
Msa0695140 AT5G57350.3 23.969 388 212 10 610 934 26 393 2.27e-14 78.2

Find 266 sgRNAs with CRISPR-Local

Find 503 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCCTGCAACAGCTTTAT+TGG 0.127790 4_4:-64570739 Msa0695140:CDS
CTTCTGTATGGCGCTCTTAC+TGG 0.137276 4_4:-64570885 Msa0695140:CDS
TGTATTGTTGGGAAAGTATT+TGG 0.165698 4_4:-64570814 Msa0695140:CDS
TTAATTCATTGGCATCATTT+TGG 0.206497 4_4:+64568273 None:intergenic
GGAGTATTGATTGGAGTCTT+AGG 0.229752 4_4:-64567880 Msa0695140:CDS
TCAGATTCCCCTCTTCTTCA+TGG 0.235078 4_4:-64571135 Msa0695140:intron
ATGGCGCTCTTACTGGATTT+TGG 0.241881 4_4:-64570878 Msa0695140:CDS
GGTTGTAGGTGTTTGTTCTT+TGG 0.247236 4_4:-64571871 Msa0695140:CDS
GAATGGGAGCTTTGGACATC+TGG 0.249424 4_4:+64570238 None:intergenic
GAGTTCTACTAGCTTCTTAA+TGG 0.251062 4_4:+64570761 None:intergenic
TATAGAGGGCCTCCAGAAAA+TGG 0.253304 4_4:-64567821 Msa0695140:CDS
CAAGTAAATTTACAATAAAT+TGG 0.253790 4_4:+64566693 None:intergenic
CTTGAGTCAGATAATTAATT+TGG 0.256617 4_4:-64570271 Msa0695140:CDS
TTTGGTGGATGCAAGGGTTT+TGG 0.266860 4_4:-64571853 Msa0695140:CDS
AACAATGGTGTGTTAATTAA+AGG 0.285608 4_4:-64568802 Msa0695140:CDS
TCATGGTGGCAACAGGTGTT+GGG 0.293408 4_4:-64568828 Msa0695140:CDS
TTGGTGAGTGTCATTCAATT+TGG 0.297350 4_4:-64571023 Msa0695140:CDS
CACCATCTGAGCTCTTTCTA+AGG 0.299600 4_4:+64568771 None:intergenic
CCGCTGATGGTATTGTTACC+TGG 0.303580 4_4:-64570437 Msa0695140:CDS
TCAAGGAAAATGCACAAAAT+TGG 0.305293 4_4:+64566759 None:intergenic
TGTGTTGATGAGAGATAATT+TGG 0.310034 4_4:-64567102 Msa0695140:CDS
ATGCACTGCACACCCCTTCC+TGG 0.312304 4_4:+64568209 None:intergenic
GCTTATAACATTTGTATTGT+TGG 0.323122 4_4:-64570826 Msa0695140:CDS
CGCTGATGGTATTGTTACCT+GGG 0.329723 4_4:-64570436 Msa0695140:CDS
GGCCTTTCCTCATGGATGAT+TGG 0.331728 4_4:-64571058 Msa0695140:CDS
TCTTCTTTGCTTATCACGTT+TGG 0.333112 4_4:+64571972 None:intergenic
TTATCTCCTGTAACCATTAC+AGG 0.336285 4_4:+64567790 None:intergenic
CAAACTCATGTGTCCGTTCA+TGG 0.337981 4_4:-64566638 Msa0695140:three_prime_UTR
CATGGATGTCCTTGTTGCTT+TGG 0.338225 4_4:-64570943 Msa0695140:CDS
AATACGAGAGAAAGGAAATA+AGG 0.342922 4_4:+64572638 None:intergenic
AGGTATACTGCTGGGGCTCT+TGG 0.348034 4_4:-64568973 Msa0695140:CDS
CGACGGAACCAACCGGATTC+AGG 0.348664 4_4:-64572478 Msa0695140:CDS
ACTCATCAAAGAAGTGAAAA+TGG 0.349385 4_4:+64568315 None:intergenic
CTTATAACATTTGTATTGTT+GGG 0.352878 4_4:-64570825 Msa0695140:CDS
GTACTATCTCCAACCGGTTT+AGG 0.354063 4_4:+64572134 None:intergenic
TGGTGAGTGTCATTCAATTT+GGG 0.354358 4_4:-64571022 Msa0695140:CDS
AGGTTGGCATTCAAGATGTT+AGG 0.358093 4_4:-64567295 Msa0695140:CDS
TCTGTTGCCAAGGTGTTTGC+AGG 0.360309 4_4:-64568694 Msa0695140:CDS
TTAGAAGCCATTCTCGCATA+AGG 0.362030 4_4:+64571669 None:intergenic
CAGAGAGTTCGTCTATGTTT+CGG 0.362552 4_4:-64571638 Msa0695140:CDS
GTGGCTTTAGCTACTTCATT+AGG 0.364293 4_4:-64572011 Msa0695140:CDS
CAGATTCCCCTCTTCTTCAT+GGG 0.370257 4_4:-64571134 Msa0695140:CDS
GAGTATTGATTGGAGTCTTA+GGG 0.372614 4_4:-64567879 Msa0695140:CDS
TCAGACTTCTCTGCTATTCC+AGG 0.372749 4_4:-64568227 Msa0695140:CDS
ATCACGCCTGTAATGGTTAC+AGG 0.374551 4_4:-64567796 Msa0695140:CDS
GATGCCAATGAATTAAAATC+AGG 0.379078 4_4:-64568266 Msa0695140:CDS
AAGCTTCCACCATGGGTTGC+TGG 0.384722 4_4:-64566945 Msa0695140:CDS
TCATATACTCGTTATTACTT+TGG 0.386797 4_4:-64571088 Msa0695140:CDS
AATGACAGAGCTACAATTGT+AGG 0.388212 4_4:+64569118 None:intergenic
GCTTTCAGAGCTCTTAGAAA+TGG 0.390325 4_4:-64570975 Msa0695140:CDS
CCGTGGAGAATTTCTTAAAC+TGG 0.391473 4_4:-64568665 Msa0695140:CDS
TCTGTTTGTGCTCTTCTGTA+TGG 0.392307 4_4:-64570897 Msa0695140:CDS
TATAGACGGACAGCGTGTTT+TGG 0.392640 4_4:-64568186 Msa0695140:intron
TGTTTCAACCGGACCTAAAC+CGG 0.394767 4_4:-64572147 Msa0695140:CDS
CGGACACATGAGTTTGTTCA+TGG 0.400250 4_4:+64566645 None:intergenic
TGAAAGGGGTGAGGCAGTTT+CGG 0.402464 4_4:-64571812 Msa0695140:CDS
ATGGATGTCCTTGTTGCTTT+GGG 0.403864 4_4:-64570942 Msa0695140:CDS
AAGTTATGTAAATGAGAGTA+TGG 0.407246 4_4:-64570409 Msa0695140:CDS
CAACAGATATAGAAAACATA+AGG 0.407868 4_4:+64568899 None:intergenic
GGTTTAGGTCCGGTTGAAAC+AGG 0.410582 4_4:+64572149 None:intergenic
ACAACCAATAAAGCTGTTGC+AGG 0.410607 4_4:+64570735 None:intergenic
GTCATGGTGGCAACAGGTGT+TGG 0.416154 4_4:-64568829 Msa0695140:CDS
AGTAATAACGAGTATATGAA+TGG 0.419114 4_4:+64571092 None:intergenic
TAATGGTTACAGGAGATAAC+TGG 0.422229 4_4:-64567786 Msa0695140:CDS
AAGAAGATTATTGTGTTTGG+TGG 0.427442 4_4:+64572771 None:intergenic
ATGAGTTTGTTCATGGAGAT+AGG 0.433842 4_4:+64566652 None:intergenic
CTCTCTCTCTCGAGAAATCA+TGG 0.435045 4_4:-64572601 Msa0695140:exon
GTTCTGATCAGGTTGGTAAC+AGG 0.435074 4_4:-64568005 Msa0695140:intron
TAGAAGCCATTCTCGCATAA+GGG 0.435660 4_4:+64571670 None:intergenic
TTGCCGTACCAGTTGCTGCC+GGG 0.437758 4_4:-64566992 Msa0695140:CDS
TCTATTTCTCTTTCTTCCAC+AGG 0.437986 4_4:+64570516 None:intergenic
AATAAAACCCCGGCAGCAAC+TGG 0.442685 4_4:+64566984 None:intergenic
ATCTCCAACCGGTTTAGGTC+CGG 0.444101 4_4:+64572139 None:intergenic
AGAAGCTTCTGTTGTTATAG+AGG 0.445207 4_4:-64567836 Msa0695140:CDS
ATGCCCATGTGCACTTGGTT+TGG 0.446212 4_4:-64568866 Msa0695140:CDS
GCATTGATCTCCTTCGAAAC+AGG 0.451969 4_4:+64570369 None:intergenic
TGCCAAGGTGTTTGCAGGAA+TGG 0.454986 4_4:-64568689 Msa0695140:CDS
TCAAGTATTGTAGTAAGTCT+TGG 0.455124 4_4:+64566855 None:intergenic
GAGATCAATGCATCTGTCAT+TGG 0.457423 4_4:-64570357 Msa0695140:CDS
AGTGTCATTCAATTTGGGAT+TGG 0.457590 4_4:-64571017 Msa0695140:CDS
GCGAGAATGGCTTCTAAAGA+TGG 0.457955 4_4:-64571663 Msa0695140:CDS
TTACATGAACCTGTTTCAAC+CGG 0.460775 4_4:-64572158 Msa0695140:CDS
CTTGAAGAAAGTGCCAAGAC+TGG 0.462679 4_4:-64567922 Msa0695140:CDS
TGGTACGGCAATAATATTGT+AGG 0.462863 4_4:+64567004 None:intergenic
GTTATTGCAATTGAAGATGC+AGG 0.464292 4_4:-64571945 Msa0695140:CDS
TGTAGGTGTTTGTTCTTTGG+TGG 0.464503 4_4:-64571868 Msa0695140:CDS
TTTGTTCTTTGGTGGATGCA+AGG 0.466118 4_4:-64571860 Msa0695140:CDS
GACTGTATCGGATCCTACTT+TGG 0.467006 4_4:+64570293 None:intergenic
AAGAATGCAATTGAAGATGC+AGG 0.469462 4_4:-64572197 Msa0695140:CDS
GCAGATGTTGGTATGGCAAT+TGG 0.470750 4_4:-64567161 Msa0695140:CDS
ATGGGTTGCTGGTGCATGCA+TGG 0.471253 4_4:-64566934 Msa0695140:CDS
GATTGGATTATTTGAGATGG+AGG 0.472917 4_4:+64572831 None:intergenic
GCCGGAGTCATCGCCGGCGC+CGG 0.474208 4_4:+64572554 None:intergenic
TAGAAGCCCTTATGCGAGAA+TGG 0.476362 4_4:-64571676 Msa0695140:CDS
CACAATGTTATTGACGCCTC+AGG 0.477200 4_4:-64566570 Msa0695140:three_prime_UTR
AGTTCTTAGTTCTAGATCGT+TGG 0.488758 4_4:-64571745 Msa0695140:CDS
GAGATGTGGGCCTTTCCTCA+TGG 0.488956 4_4:-64571066 Msa0695140:CDS
CGCTACAAGGATCCCAGTCT+TGG 0.489491 4_4:+64567909 None:intergenic
TCGTTATTACTTTGGAGATG+TGG 0.489608 4_4:-64571080 Msa0695140:CDS
GTTGTTTAAAATTCCTTCAA+CGG 0.489850 4_4:+64572058 None:intergenic
GTATGCTTAGTGGTATGAAA+GGG 0.490896 4_4:-64571827 Msa0695140:CDS
ATTGCATGCCCATGTGCACT+TGG 0.493098 4_4:-64568871 Msa0695140:CDS
CGGATTCAGGTCAGAATCAC+CGG 0.493554 4_4:-64572465 Msa0695140:CDS
AATGGGAATCACGCCTGTAA+TGG 0.494340 4_4:-64567803 Msa0695140:CDS
GGAGTTAGAGCAAGCGGCGC+AGG 0.494862 4_4:+64572437 None:intergenic
ACAGATTGGATTATTTGAGA+TGG 0.496441 4_4:+64572828 None:intergenic
AGTATGCTTAGTGGTATGAA+AGG 0.501872 4_4:-64571828 Msa0695140:CDS
ATTGCCGTACCAGTTGCTGC+CGG 0.503085 4_4:-64566993 Msa0695140:CDS
TCAACGACGACGGAACCAAC+CGG 0.504841 4_4:-64572485 Msa0695140:CDS
CGTTATTACTTTGGAGATGT+GGG 0.506990 4_4:-64571079 Msa0695140:CDS
TGCCGTACCAGTTGCTGCCG+GGG 0.507352 4_4:-64566991 Msa0695140:CDS
GCATTAGCTGCTGCAGATGT+TGG 0.507757 4_4:-64567173 Msa0695140:CDS
AATGGGAGCTTTGGACATCT+GGG 0.508519 4_4:+64570239 None:intergenic
GTCGCCAAACCAAGTGCACA+TGG 0.508959 4_4:+64568862 None:intergenic
CGGTGATTCTGACCTGAATC+CGG 0.509572 4_4:+64572466 None:intergenic
ATAGAGGGCCTCCAGAAAAT+GGG 0.509737 4_4:-64567820 Msa0695140:CDS
GGCAATAATATTGTAGGCCA+TGG 0.510022 4_4:+64567010 None:intergenic
TACGTTATATTTGATAAGAC+AGG 0.512329 4_4:-64568745 Msa0695140:CDS
GGAGTCATCGCCGGCGCCGG+TGG 0.512775 4_4:+64572557 None:intergenic
GTTGGTATGGCAATTGGAGC+TGG 0.513083 4_4:-64567155 Msa0695140:CDS
GGTTGGCATTCAAGATGTTA+GGG 0.513253 4_4:-64567294 Msa0695140:CDS
CATTCAAGATGTTAGGGCAG+AGG 0.513441 4_4:-64567288 Msa0695140:CDS
GAAATATATACAAACCTCCT+TGG 0.514370 4_4:+64567744 None:intergenic
CATAAGTATTTCTACTGAAG+TGG 0.514915 4_4:-64567962 Msa0695140:CDS
ACTGCTGTCATGGTGGCAAC+AGG 0.515401 4_4:-64568835 Msa0695140:CDS
TTGTTCTTTGGTGGATGCAA+GGG 0.516975 4_4:-64571859 Msa0695140:CDS
TACATTTGAACAATGAGTGC+AGG 0.518273 4_4:+64566726 None:intergenic
GATGAGTCCTCTCTTACCAA+TGG 0.518678 4_4:-64568299 Msa0695140:CDS
CACATTAAAGCTACCAAAGT+AGG 0.519785 4_4:-64570306 Msa0695140:CDS
AGGGCAGAGGTTATGCCTGC+AGG 0.519939 4_4:-64567275 Msa0695140:CDS
TTGTTCATGGAGATAGGTAG+AGG 0.521805 4_4:+64566658 None:intergenic
AGAGGTTATGCCTGCAGGAA+AGG 0.525897 4_4:-64567270 Msa0695140:CDS
ATACTCCATTGCACGCTACA+AGG 0.526385 4_4:+64567896 None:intergenic
GGCGACACCAACTGCTGTCA+TGG 0.527208 4_4:-64568845 Msa0695140:CDS
TGCTGTTTCACCATCTCCAT+CGG 0.527914 4_4:-64572739 Msa0695140:five_prime_UTR
ACCACATCAGCCTTTCCTGC+AGG 0.530022 4_4:+64567260 None:intergenic
CATGGTGGCAACAGGTGTTG+GGG 0.530178 4_4:-64568827 Msa0695140:CDS
TAAGACAGGAACTCTAACTC+AGG 0.530527 4_4:-64568731 Msa0695140:CDS
GTAATAACGAGTATATGAAT+GGG 0.531622 4_4:+64571093 None:intergenic
TAAGGAAGATGTATTTAAAG+AGG 0.531880 4_4:+64572656 None:intergenic
TGATTGGTTGAAGTGGGCAT+TGG 0.532100 4_4:-64571042 Msa0695140:CDS
ATCCTTAGAAAGAGCTCAGA+TGG 0.532974 4_4:-64568773 Msa0695140:CDS
CTTTGGTAGCTTTAATGTGA+AGG 0.535532 4_4:+64570310 None:intergenic
GGCATCAGATGTCTTCCCCT+TGG 0.535998 4_4:+64570782 None:intergenic
GCAAGCGGCGCAGGTCATGC+CGG 0.536269 4_4:+64572446 None:intergenic
GATAATTAATTTGGTCGAGA+CGG 0.537531 4_4:-64570262 Msa0695140:CDS
AAGTGGAAGGTGATACAGAT+TGG 0.537914 4_4:+64572814 None:intergenic
AAAGAGTAGTAACTTACAAA+GGG 0.538032 4_4:-64566808 Msa0695140:three_prime_UTR
AACAGATATAGAAAACATAA+GGG 0.538427 4_4:+64568900 None:intergenic
GGACATGAGAGCGGCTTCGA+CGG 0.539531 4_4:+64572416 None:intergenic
AGATTCCCCTCTTCTTCATG+GGG 0.539845 4_4:-64571133 Msa0695140:CDS
ACCGGCGCCGGCGATGACTC+CGG 0.540319 4_4:-64572555 Msa0695140:CDS
TAAAGAGTAGTAACTTACAA+AGG 0.541634 4_4:-64566809 Msa0695140:three_prime_UTR
GCCGCTCTCATGTCCGTCGA+CGG 0.541888 4_4:-64572408 Msa0695140:CDS
GAGTATATGAATGGGATATG+AGG 0.542597 4_4:+64571101 None:intergenic
ATTGGATTATTTGAGATGGA+GGG 0.543204 4_4:+64572832 None:intergenic
GAAGCTTCTGTTGTTATAGA+GGG 0.546172 4_4:-64567835 Msa0695140:CDS
TACAAAGGGTGCAAATGAGT+TGG 0.547463 4_4:-64566794 Msa0695140:three_prime_UTR
GGGAATCAAGCTTCCACCAT+GGG 0.547653 4_4:-64566952 Msa0695140:CDS
ATGAGGTGAATACGAGAGAA+AGG 0.547814 4_4:+64572630 None:intergenic
AGGAAGCTGCTGGTGGAAAG+TGG 0.550070 4_4:-64567985 Msa0695140:CDS
AACTGCTCGAGCTGTTGCCA+AGG 0.550725 4_4:-64567761 Msa0695140:CDS
ATTTACATAACTTGAGCCCC+AGG 0.551493 4_4:+64570419 None:intergenic
ATTGAATTATGTATTTGCCA+TGG 0.551910 4_4:-64567027 Msa0695140:CDS
AAGGACACCATGCAAATTGA+TGG 0.553347 4_4:+64570329 None:intergenic
GTGGAAGTTAGTTGAATACT+CGG 0.553506 4_4:+64572576 None:intergenic
AGATGGTAGTATAGTTGCAA+TGG 0.554431 4_4:-64567222 Msa0695140:CDS
AGCCACTGTCTCTGTTGCCA+AGG 0.554586 4_4:-64568704 Msa0695140:CDS
TTGGGATCCATTGGTAAGAG+AGG 0.555619 4_4:+64568292 None:intergenic
CAACTAACTTCCACCGGCGC+CGG 0.556089 4_4:-64572567 Msa0695140:CDS
TTCTCTGCTATTCCAGGAAG+GGG 0.557195 4_4:-64568221 Msa0695140:CDS
AGTGTATCTCATATGTGCGT+TGG 0.557667 4_4:-64566596 Msa0695140:three_prime_UTR
TGGTAGTATAGTTGCAATGG+TGG 0.558345 4_4:-64567219 Msa0695140:CDS
GGCTAGCAGTGAACACCCGC+TGG 0.559219 4_4:-64568363 Msa0695140:CDS
GCGTGCAATGGAGTATTGAT+TGG 0.559641 4_4:-64567889 Msa0695140:CDS
ACCACCGTACTATCTCCAAC+CGG 0.560837 4_4:+64572128 None:intergenic
GCGTGTGTGAATTCCGTTGA+AGG 0.561783 4_4:-64572071 Msa0695140:CDS
ACATCTGCAGCAGCTAATGC+AGG 0.562486 4_4:+64567176 None:intergenic
TAAACTGGTGGCTTCTGCTG+AGG 0.563783 4_4:-64568650 Msa0695140:intron
GGGATCCTTGTAGCGTGCAA+TGG 0.564317 4_4:-64567901 Msa0695140:CDS
AATGGTGTGTTAATTAAAGG+AGG 0.566500 4_4:-64568799 Msa0695140:CDS
GCGAACATCTTCGAGATCGC+CGG 0.566672 4_4:+64572536 None:intergenic
GGTTGGTAACAGGAAGCTGC+TGG 0.567598 4_4:-64567995 Msa0695140:CDS
CTTCTCTGCTATTCCAGGAA+GGG 0.570582 4_4:-64568222 Msa0695140:CDS
GTATTTGGAATGTCTTGCCA+AGG 0.571096 4_4:-64570799 Msa0695140:CDS
TCATGGATGATTGGTTGAAG+TGG 0.573589 4_4:-64571049 Msa0695140:CDS
GTGCAGGCGAGAGGAGCTCA+AGG 0.573659 4_4:+64566742 None:intergenic
TTGAAGAAAGTGCCAAGACT+GGG 0.574392 4_4:-64567921 Msa0695140:CDS
GTCACTAGGTTGAATAAGCA+AGG 0.575805 4_4:+64570491 None:intergenic
CATTATTGACACTATTGTGT+TGG 0.576900 4_4:-64569099 Msa0695140:intron
TTGGAGCATACCCAGATGAA+TGG 0.578362 4_4:-64568954 Msa0695140:CDS
ACTTCTCTGCTATTCCAGGA+AGG 0.579821 4_4:-64568223 Msa0695140:CDS
CAGGTAACAATACCATCAGC+GGG 0.580491 4_4:+64570438 None:intergenic
GGTACAAAGATTCCCGCTGA+TGG 0.580974 4_4:-64570450 Msa0695140:CDS
GATCTAGAACTAAGAACTTG+AGG 0.581982 4_4:+64571750 None:intergenic
ATGCCAATGAATTAAAATCA+GGG 0.582049 4_4:-64568265 Msa0695140:CDS
TAGAAATGGTTCAACAAACA+TGG 0.582828 4_4:-64570961 Msa0695140:CDS
GATTCTGACCTGAATCCGGT+TGG 0.584660 4_4:+64572470 None:intergenic
AGCTGCTGCAGATGTTGGTA+TGG 0.585708 4_4:-64567168 Msa0695140:CDS
TGCTCGAGCTGTTGCCAAGG+AGG 0.585770 4_4:-64567758 Msa0695140:intron
TCAGCGGGAATCTTTGTACC+AGG 0.585900 4_4:+64570453 None:intergenic
GTCCATTCCTGCAAACACCT+TGG 0.586968 4_4:+64568687 None:intergenic
GGAGGTACCATCAATTTGCA+TGG 0.587008 4_4:-64570336 Msa0695140:CDS
GAGATCGCCGGAGTCATCGC+CGG 0.588833 4_4:+64572548 None:intergenic
TGGAGAATTTCTTAAACTGG+TGG 0.589048 4_4:-64568662 Msa0695140:CDS
AGTATTCAACTAACTTCCAC+CGG 0.589297 4_4:-64572573 Msa0695140:CDS
AACCCCGGCAGCAACTGGTA+CGG 0.593335 4_4:+64566989 None:intergenic
TTATTGGTTGTTAAAGACAA+AGG 0.593463 4_4:-64570723 Msa0695140:intron
TTTCAATAGAAACCTTGTCA+AGG 0.594793 4_4:-64572337 Msa0695140:intron
TATTTGGAATGTCTTGCCAA+GGG 0.598379 4_4:-64570798 Msa0695140:CDS
GCCTGCAGGAAAGGCTGATG+TGG 0.598442 4_4:-64567261 Msa0695140:CDS
TTCGACGGAGTTAGAGCAAG+CGG 0.598928 4_4:+64572431 None:intergenic
TGCACAAAATTGGAATCACA+AGG 0.599250 4_4:+64566769 None:intergenic
AACCAATCATCCATGAGGAA+AGG 0.599373 4_4:+64571056 None:intergenic
ATGCATGCACCAGCAACCCA+TGG 0.601867 4_4:+64566936 None:intergenic
TATGCTTAGTGGTATGAAAG+GGG 0.608048 4_4:-64571826 Msa0695140:CDS
GACACATTAAAAGTTCTGCC+TGG 0.608452 4_4:-64570471 Msa0695140:CDS
TCAACCGGACCTAAACCGGT+TGG 0.610393 4_4:-64572143 Msa0695140:CDS
ATAGTTGCAATGGTGGGTGA+CGG 0.612936 4_4:-64567212 Msa0695140:CDS
AGTATTGATTGGAGTCTTAG+GGG 0.613540 4_4:-64567878 Msa0695140:CDS
TTGGTATGGCAATTGGAGCT+GGG 0.615027 4_4:-64567154 Msa0695140:CDS
TAAACCGGTTGGAGATAGTA+CGG 0.617219 4_4:-64572132 Msa0695140:CDS
CGAGTCTATACCTGTTTCGA+AGG 0.617498 4_4:-64570379 Msa0695140:CDS
ATCAATGCATCTGTCATTGG+AGG 0.619885 4_4:-64570354 Msa0695140:CDS
CTGTAGTTCCCAAAGCAACA+AGG 0.623003 4_4:+64570934 None:intergenic
ACAGGTGTTGGGGCTAACAA+TGG 0.625686 4_4:-64568817 Msa0695140:CDS
GGAAGCTTGATTCCCAGTGA+AGG 0.626009 4_4:+64566960 None:intergenic
CATGGATGATTGGTTGAAGT+GGG 0.626764 4_4:-64571048 Msa0695140:CDS
TGGTAACAGGAAGCTGCTGG+TGG 0.634413 4_4:-64567992 Msa0695140:CDS
TGTTCATGGAGATAGGTAGA+GGG 0.634625 4_4:+64566659 None:intergenic
GAACAATGAGTGCAGGCGAG+AGG 0.636024 4_4:+64566733 None:intergenic
GGCTTGAATTACACCGTCGA+CGG 0.636046 4_4:+64572395 None:intergenic
CCAGGTAACAATACCATCAG+CGG 0.638825 4_4:+64570437 None:intergenic
GTGGTTGGACAGTTCACGAT+CGG 0.640067 4_4:-64572110 Msa0695140:CDS
TATCTGACTCAAGACTGTAT+CGG 0.640076 4_4:+64570281 None:intergenic
ACTCACACTAAGAAGCAAGC+TGG 0.641334 4_4:+64571605 None:intergenic
CACCTTGGCAACAGAGACAG+TGG 0.642911 4_4:+64568702 None:intergenic
ATTAGAGTTAAACCTTGACA+AGG 0.645378 4_4:+64572325 None:intergenic
AAGACAGGAACTCTAACTCA+GGG 0.647613 4_4:-64568730 Msa0695140:CDS
GATTCCCCTCTTCTTCATGG+GGG 0.647766 4_4:-64571132 Msa0695140:CDS
GTTGGAGATAGTACGGTGGT+TGG 0.649965 4_4:-64572125 Msa0695140:CDS
GTTTCTATTGAAAACGACGT+CGG 0.653328 4_4:+64572347 None:intergenic
CATGCACCAGCAACCCATGG+TGG 0.653724 4_4:+64566939 None:intergenic
GGTGTGCAGTGCATTATAGA+CGG 0.653890 4_4:-64568200 Msa0695140:CDS
GTAAATGAGAGTATGGTGAC+TGG 0.657765 4_4:-64570402 Msa0695140:CDS
TGGGAATCAAGCTTCCACCA+TGG 0.659512 4_4:-64566953 Msa0695140:CDS
ATTTGGAATGTCTTGCCAAG+GGG 0.662416 4_4:-64570797 Msa0695140:CDS
CCAGTTTAAGAAATTCTCCA+CGG 0.666614 4_4:+64568665 None:intergenic
ACATTAAGCTCACTCAACAA+AGG 0.672540 4_4:+64571783 None:intergenic
TTAGTGGTATGAAAGGGGTG+AGG 0.677514 4_4:-64571821 Msa0695140:CDS
GTTGGACAGTTCACGATCGG+CGG 0.678514 4_4:-64572107 Msa0695140:CDS
GGTAGTATAGTTGCAATGGT+GGG 0.680572 4_4:-64567218 Msa0695140:CDS
TCGCCAAACCAAGTGCACAT+GGG 0.686508 4_4:+64568863 None:intergenic
GTGTTTGCAGGAATGGACCG+TGG 0.689642 4_4:-64568682 Msa0695140:CDS
GATCGGCGGTATGACATGTG+CGG 0.691196 4_4:-64572093 Msa0695140:CDS
AACGTGGAAGATAGAACCTG+AGG 0.692439 4_4:+64566554 None:intergenic
GACACCAACTGCTGTCATGG+TGG 0.692490 4_4:-64568842 Msa0695140:CDS
ACCGTCGACGGACATGAGAG+CGG 0.693610 4_4:+64572407 None:intergenic
GTTGCCACCATGACAGCAGT+TGG 0.695583 4_4:+64568838 None:intergenic
CAGTGAAGGAAATAAAACCC+CGG 0.701022 4_4:+64566974 None:intergenic
GCTGATGGTATTGTTACCTG+GGG 0.702676 4_4:-64570435 Msa0695140:CDS
TGGAATAGCAGAGAAGTCTG+AGG 0.707769 4_4:+64568229 None:intergenic
GCACAAAATTGGAATCACAA+GGG 0.719506 4_4:+64566770 None:intergenic
CCAATGAATTAAAATCAGGG+TGG 0.720072 4_4:-64568262 Msa0695140:CDS
ACTTCAACCAATCATCCATG+AGG 0.728611 4_4:+64571051 None:intergenic
ACCGGTTGGAGATAGTACGG+TGG 0.764274 4_4:-64572129 Msa0695140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATATTTTGTTTAAATTTT+AGG - chr4_4:64570405-64570424 Msa0695140:CDS 10.0%
!!! TTTCTATAATATTTTCTTTT+TGG - chr4_4:64571673-64571692 Msa0695140:CDS 10.0%
!! GAAAAGAAAAGAAAAAATAT+TGG + chr4_4:64568851-64568870 None:intergenic 15.0%
!! TTTATGAATAATTCTATGTA+AGG + chr4_4:64570055-64570074 None:intergenic 15.0%
!!! ATTGTTATTATCTTTAATGA+AGG - chr4_4:64571262-64571281 Msa0695140:intron 15.0%
!!! TATAATATTTTCTTTTTGGT+TGG - chr4_4:64571677-64571696 Msa0695140:CDS 15.0%
!! CAAGTAAATTTACAATAAAT+TGG + chr4_4:64572708-64572727 None:intergenic 15.0%
!! AAAAAGAAGATTATTGTGTT+TGG + chr4_4:64566633-64566652 None:intergenic 20.0%
!! ATTTAAAGAGGAAAGAAAAA+AGG + chr4_4:64566733-64566752 None:intergenic 20.0%
!! AAATATGGCTATAGATTAAA+GGG + chr4_4:64567821-64567840 None:intergenic 20.0%
!! CAAAATAACAAGAACAAATA+TGG + chr4_4:64567836-64567855 None:intergenic 20.0%
!!! CATATTTGTTCTTGTTATTT+TGG - chr4_4:64567834-64567853 Msa0695140:CDS 20.0%
!! CAAGAAACTAAACAAAATAA+GGG + chr4_4:64568195-64568214 None:intergenic 20.0%
!! ACAAGAAACTAAACAAAATA+AGG + chr4_4:64568196-64568215 None:intergenic 20.0%
!! CTTATAACATTTGTATTGTT+GGG - chr4_4:64568573-64568592 Msa0695140:intron 20.0%
!!! TTTTTCTTTTCTTTTCTAGA+TGG - chr4_4:64568855-64568874 Msa0695140:CDS 20.0%
!! TACACTATCTATTGAAATTT+GGG + chr4_4:64569613-64569632 None:intergenic 20.0%
!! TTACACTATCTATTGAAATT+TGG + chr4_4:64569614-64569633 None:intergenic 20.0%
!!! ATTCAACAGAGTTTTATATT+AGG + chr4_4:64569722-64569741 None:intergenic 20.0%
!!! TTATTGATTCCAATTATTTC+AGG - chr4_4:64570084-64570103 Msa0695140:intron 20.0%
!! AACAGATATAGAAAACATAA+GGG + chr4_4:64570501-64570520 None:intergenic 20.0%
!! TAAAATGCCAAAACATTATT+AGG + chr4_4:64570924-64570943 None:intergenic 20.0%
!!! GTGTTTTGGTAAAATTTTTT+TGG - chr4_4:64571226-64571245 Msa0695140:intron 20.0%
!!! ATGACAGTTATAACAAATTT+TGG - chr4_4:64572029-64572048 Msa0695140:CDS 20.0%
!!! TGACAGTTATAACAAATTTT+GGG - chr4_4:64572030-64572049 Msa0695140:CDS 20.0%
!!! AATTTTTTAACGAAAGTGGA+AGG + chr4_4:64566600-64566619 None:intergenic 25.0%
! TAAGGAAGATGTATTTAAAG+AGG + chr4_4:64566745-64566764 None:intergenic 25.0%
!!! GTTTGTTTAGTTACTGATTT+TGG - chr4_4:64567140-64567159 Msa0695140:CDS 25.0%
! TTCTTAATATCTTCATCCTA+GGG + chr4_4:64567186-64567205 None:intergenic 25.0%
! ATTCTTAATATCTTCATCCT+AGG + chr4_4:64567187-64567206 None:intergenic 25.0%
!! GTTGTTTAAAATTCCTTCAA+CGG + chr4_4:64567343-64567362 None:intergenic 25.0%
! CAAATATGGCTATAGATTAA+AGG + chr4_4:64567822-64567841 None:intergenic 25.0%
! CATACAGAAATTTCATCTAA+CGG - chr4_4:64568070-64568089 Msa0695140:intron 25.0%
! GTAATAACGAGTATATGAAT+GGG + chr4_4:64568308-64568327 None:intergenic 25.0%
! AGTAATAACGAGTATATGAA+TGG + chr4_4:64568309-64568328 None:intergenic 25.0%
! TCATATACTCGTTATTACTT+TGG - chr4_4:64568310-64568329 Msa0695140:CDS 25.0%
! GCTTATAACATTTGTATTGT+TGG - chr4_4:64568572-64568591 Msa0695140:intron 25.0%
!! TTATTGGTTGTTAAAGACAA+AGG - chr4_4:64568675-64568694 Msa0695140:CDS 25.0%
!!! GCTTTGTTTTCTTAAGAAAA+TGG - chr4_4:64568721-64568740 Msa0695140:CDS 25.0%
!! TTGTTTTCTTAAGAAAATGG+AGG - chr4_4:64568724-64568743 Msa0695140:CDS 25.0%
!! TGTTTTCTTAAGAAAATGGA+GGG - chr4_4:64568725-64568744 Msa0695140:CDS 25.0%
! AACCTAAATATAAGACAATC+AGG + chr4_4:64568765-64568784 None:intergenic 25.0%
!!! ATTTAGGTTGAAATTAGTGA+TGG - chr4_4:64568776-64568795 Msa0695140:CDS 25.0%
! AAGTTATGTAAATGAGAGTA+TGG - chr4_4:64568989-64569008 Msa0695140:intron 25.0%
! CTTGAGTCAGATAATTAATT+TGG - chr4_4:64569127-64569146 Msa0695140:CDS 25.0%
!! TAATCAGCAAACTTTTGAAT+GGG + chr4_4:64569179-64569198 None:intergenic 25.0%
!! ATAATCAGCAAACTTTTGAA+TGG + chr4_4:64569180-64569199 None:intergenic 25.0%
! TGATACCATGTTAAAATTTG+GGG + chr4_4:64569406-64569425 None:intergenic 25.0%
! CTGATACCATGTTAAAATTT+GGG + chr4_4:64569407-64569426 None:intergenic 25.0%
! TCTGATACCATGTTAAAATT+TGG + chr4_4:64569408-64569427 None:intergenic 25.0%
! ACACTATCTATTGAAATTTG+GGG + chr4_4:64569612-64569631 None:intergenic 25.0%
! ACTAAGTAAAAATGCATACA+TGG + chr4_4:64569824-64569843 None:intergenic 25.0%
!! GTATGCATTTTTACTTAGTT+TGG - chr4_4:64569825-64569844 Msa0695140:intron 25.0%
! AAAATATTGTTCTGACTCTA+CGG + chr4_4:64570005-64570024 None:intergenic 25.0%
!!! ATTCCAATTATTTCAGGTTT+AGG - chr4_4:64570090-64570109 Msa0695140:intron 25.0%
! ATAAACGTGAGTTTGAATTA+TGG + chr4_4:64570122-64570141 None:intergenic 25.0%
! AATGTATCTTAAGTCATTTG+TGG + chr4_4:64570209-64570228 None:intergenic 25.0%
! TAAGATACATTAACTAACTC+AGG - chr4_4:64570218-64570237 Msa0695140:intron 25.0%
! AAAATATGTACACAGAAGTA+AGG + chr4_4:64570394-64570413 None:intergenic 25.0%
!!! TTAAATTTTAGGTATACTGC+TGG - chr4_4:64570416-64570435 Msa0695140:CDS 25.0%
!!! TAAATTTTAGGTATACTGCT+GGG - chr4_4:64570417-64570436 Msa0695140:CDS 25.0%
! CAACAGATATAGAAAACATA+AGG + chr4_4:64570502-64570521 None:intergenic 25.0%
!! TATGTTTTCTATATCTGTTG+TGG - chr4_4:64570502-64570521 Msa0695140:CDS 25.0%
! AACAATGGTGTGTTAATTAA+AGG - chr4_4:64570596-64570615 Msa0695140:intron 25.0%
! TACGTTATATTTGATAAGAC+AGG - chr4_4:64570653-64570672 Msa0695140:intron 25.0%
!! TGTTTTATGTCTTTTATAGC+TGG + chr4_4:64570853-64570872 None:intergenic 25.0%
!! CAACTTTCCTAATAATGTTT+TGG - chr4_4:64570914-64570933 Msa0695140:CDS 25.0%
!! TAATTCATTGGCATCATTTT+GGG + chr4_4:64571127-64571146 None:intergenic 25.0%
!! TTAATTCATTGGCATCATTT+TGG + chr4_4:64571128-64571147 None:intergenic 25.0%
! ATGCCAATGAATTAAAATCA+GGG - chr4_4:64571133-64571152 Msa0695140:CDS 25.0%
!! TAATGAAGGAATATGTTTTG+TGG - chr4_4:64571276-64571295 Msa0695140:intron 25.0%
!!! CTTTTCTTAAGAGTTGATAA+AGG - chr4_4:64571328-64571347 Msa0695140:intron 25.0%
! AGTATGATTAAAACCATAAC+TGG - chr4_4:64571860-64571879 Msa0695140:CDS 25.0%
!! TTGATTTTCTTGTGCATAAA+AGG - chr4_4:64571903-64571922 Msa0695140:CDS 25.0%
!!! AAGAAAATGTGTTTTTTGAC+AGG - chr4_4:64572083-64572102 Msa0695140:CDS 25.0%
! ATTGAATTATGTATTTGCCA+TGG - chr4_4:64572371-64572390 Msa0695140:CDS 25.0%
! TAAAGAGTAGTAACTTACAA+AGG - chr4_4:64572589-64572608 Msa0695140:exon 25.0%
! AAAGAGTAGTAACTTACAAA+GGG - chr4_4:64572590-64572609 Msa0695140:exon 25.0%
! ATTGGATTATTTGAGATGGA+GGG + chr4_4:64566569-64566588 None:intergenic 30.0%
ACAGATTGGATTATTTGAGA+TGG + chr4_4:64566573-64566592 None:intergenic 30.0%
!!! CAGCAATTTTTTAACGAAAG+TGG + chr4_4:64566604-64566623 None:intergenic 30.0%
AAGAAGATTATTGTGTTTGG+TGG + chr4_4:64566630-64566649 None:intergenic 30.0%
! AGAAAAAAGAGTTTTTCCGA+TGG + chr4_4:64566678-64566697 None:intergenic 30.0%
ATGGAAAATGGAGAGAAAAA+AGG + chr4_4:64566707-64566726 None:intergenic 30.0%
GAAAAAAGGTGAATGGAAAA+TGG + chr4_4:64566719-64566738 None:intergenic 30.0%
AATACGAGAGAAAGGAAATA+AGG + chr4_4:64566763-64566782 None:intergenic 30.0%
! TTTTATCGTAGGAATCTAGT+AGG + chr4_4:64566887-64566906 None:intergenic 30.0%
!!! TTTGTTTTGAAGTAAAGCGA+CGG + chr4_4:64567030-64567049 None:intergenic 30.0%
TTTCAATAGAAACCTTGTCA+AGG - chr4_4:64567061-64567080 Msa0695140:CDS 30.0%
ATTAGAGTTAAACCTTGACA+AGG + chr4_4:64567076-64567095 None:intergenic 30.0%
TGTTGAATTGTTTAAACCCT+AGG - chr4_4:64567167-64567186 Msa0695140:CDS 30.0%
! GGAATTTTAAACAACATCAC+CGG - chr4_4:64567348-64567367 Msa0695140:intron 30.0%
! AGTCAAGATGAGATTGTTTT+AGG - chr4_4:64567504-64567523 Msa0695140:intron 30.0%
!! GTCAAGATGAGATTGTTTTA+GGG - chr4_4:64567505-64567524 Msa0695140:intron 30.0%
!!! TCAAGATGAGATTGTTTTAG+GGG - chr4_4:64567506-64567525 Msa0695140:intron 30.0%
! TGCTTTAAACTCAAACCTTA+GGG - chr4_4:64567954-64567973 Msa0695140:CDS 30.0%
TTATGGAGCATAAAATTCTG+TGG + chr4_4:64568029-64568048 None:intergenic 30.0%
! ACAGAATTTTATGCTCCATA+AGG - chr4_4:64568028-64568047 Msa0695140:intron 30.0%
! CAGAATTTTATGCTCCATAA+GGG - chr4_4:64568029-64568048 Msa0695140:intron 30.0%
CGTTAGATGAAATTTCTGTA+TGG + chr4_4:64568072-64568091 None:intergenic 30.0%
CTATAAAAAAAACGATGACG+CGG + chr4_4:64568104-64568123 None:intergenic 30.0%
CACAAATCAATGCAAAAGTA+TGG + chr4_4:64568228-64568247 None:intergenic 30.0%
TAGAAATGGTTCAACAAACA+TGG - chr4_4:64568437-64568456 Msa0695140:intron 30.0%
!! TGTATTGTTGGGAAAGTATT+TGG - chr4_4:64568584-64568603 Msa0695140:intron 30.0%
! GTTTTCTTAAGAAAATGGAG+GGG - chr4_4:64568726-64568745 Msa0695140:CDS 30.0%
GTCCTGATTGTCTTATATTT+AGG - chr4_4:64568760-64568779 Msa0695140:CDS 30.0%
!! AGAACTTTTAATGTGTCACT+AGG + chr4_4:64568924-64568943 None:intergenic 30.0%
! GATAATTAATTTGGTCGAGA+CGG - chr4_4:64569136-64569155 Msa0695140:CDS 30.0%
! TGCTGATTATGTAAGTATTG+TGG - chr4_4:64569190-64569209 Msa0695140:intron 30.0%
TTTCCCAATACTATCAATGT+AGG + chr4_4:64569284-64569303 None:intergenic 30.0%
! TCTTGAGAGAGTATATAAAG+AGG - chr4_4:64569541-64569560 Msa0695140:intron 30.0%
CTAACTCATCCTTAAAAAAC+CGG + chr4_4:64569588-64569607 None:intergenic 30.0%
TTGGCTATATTATGCAATGT+AGG + chr4_4:64569654-64569673 None:intergenic 30.0%
!!! CTTCCATTTTTAGTTATTGC+TGG - chr4_4:64569794-64569813 Msa0695140:intron 30.0%
ACACCAGCAATAACTAAAAA+TGG + chr4_4:64569800-64569819 None:intergenic 30.0%
ACTTTCTTTACCACAAAGAA+TGG + chr4_4:64569854-64569873 None:intergenic 30.0%
AAATATTGTTCTGACTCTAC+GGG + chr4_4:64570004-64570023 None:intergenic 30.0%
AAGCCTAAACCTGAAATAAT+TGG + chr4_4:64570096-64570115 None:intergenic 30.0%
CATTATTGACACTATTGTGT+TGG - chr4_4:64570299-64570318 Msa0695140:CDS 30.0%
!! AAATTTTAGGTATACTGCTG+GGG - chr4_4:64570418-64570437 Msa0695140:CDS 30.0%
!! ACAAAGTGGTTTCCATTTTT+CGG + chr4_4:64570473-64570492 None:intergenic 30.0%
AATGGTGTGTTAATTAAAGG+AGG - chr4_4:64570599-64570618 Msa0695140:intron 30.0%
ATTTCTATGATGCCTATTAG+AGG - chr4_4:64570961-64570980 Msa0695140:CDS 30.0%
!! ATACTGTTGATTCCTCTAAT+AGG + chr4_4:64570976-64570995 None:intergenic 30.0%
ACTCATCAAAGAAGTGAAAA+TGG + chr4_4:64571086-64571105 None:intergenic 30.0%
GATGCCAATGAATTAAAATC+AGG - chr4_4:64571132-64571151 Msa0695140:CDS 30.0%
! CATAAGTATTTCTACTGAAG+TGG - chr4_4:64571436-64571455 Msa0695140:intron 30.0%
GAAATATATACAAACCTCCT+TGG + chr4_4:64571657-64571676 None:intergenic 30.0%
!! TAATTTTGAGTGCAGTTTCA+AGG - chr4_4:64571713-64571732 Msa0695140:CDS 30.0%
TATAAAACTATCCCTATCCA+CGG + chr4_4:64571824-64571843 None:intergenic 30.0%
TTATGCACAAGAAAATCAAC+AGG + chr4_4:64571902-64571921 None:intergenic 30.0%
ATTGATGTTATGGTCAAACT+TGG - chr4_4:64572058-64572077 Msa0695140:CDS 30.0%
!!! AAATGTGTTTTTTGACAGGT+TGG - chr4_4:64572087-64572106 Msa0695140:CDS 30.0%
! CAACTATACTACCATCTTTT+TGG + chr4_4:64572173-64572192 None:intergenic 30.0%
! TGTGTTGATGAGAGATAATT+TGG - chr4_4:64572296-64572315 Msa0695140:intron 30.0%
! TCAAGTATTGTAGTAAGTCT+TGG + chr4_4:64572546-64572565 None:intergenic 30.0%
TCAAGGAAAATGCACAAAAT+TGG + chr4_4:64572642-64572661 None:intergenic 30.0%
! AGTTCATTTTAAGCCATGAA+CGG + chr4_4:64572776-64572795 None:intergenic 30.0%
! GATTGGATTATTTGAGATGG+AGG + chr4_4:64566570-64566589 None:intergenic 35.0%
GAGGAAAGAAAAAAGGTGAA+TGG + chr4_4:64566726-64566745 None:intergenic 35.0%
GTGGAAGTTAGTTGAATACT+CGG + chr4_4:64566825-64566844 None:intergenic 35.0%
AGTATTCAACTAACTTCCAC+CGG - chr4_4:64566825-64566844 Msa0695140:exon 35.0%
GTTTCTATTGAAAACGACGT+CGG + chr4_4:64567054-64567073 None:intergenic 35.0%
AAGAATGCAATTGAAGATGC+AGG - chr4_4:64567201-64567220 Msa0695140:CDS 35.0%
TTACATGAACCTGTTTCAAC+CGG - chr4_4:64567240-64567259 Msa0695140:CDS 35.0%
TCTTCTTTGCTTATCACGTT+TGG + chr4_4:64567429-64567448 None:intergenic 35.0%
GTTATTGCAATTGAAGATGC+AGG - chr4_4:64567453-64567472 Msa0695140:intron 35.0%
!!! GTTTTGGAAAGTATGCTTAG+TGG - chr4_4:64567561-64567580 Msa0695140:intron 35.0%
AGTATGCTTAGTGGTATGAA+AGG - chr4_4:64567570-64567589 Msa0695140:intron 35.0%
GTATGCTTAGTGGTATGAAA+GGG - chr4_4:64567571-64567590 Msa0695140:intron 35.0%
TATGCTTAGTGGTATGAAAG+GGG - chr4_4:64567572-64567591 Msa0695140:intron 35.0%
ACATTAAGCTCACTCAACAA+AGG + chr4_4:64567618-64567637 None:intergenic 35.0%
! GATCTAGAACTAAGAACTTG+AGG + chr4_4:64567651-64567670 None:intergenic 35.0%
!! AGTTCTTAGTTCTAGATCGT+TGG - chr4_4:64567653-64567672 Msa0695140:intron 35.0%
! CTGCTTTAAACTCAAACCTT+AGG - chr4_4:64567953-64567972 Msa0695140:CDS 35.0%
TTACATCAGCAGAATCAGAA+AGG + chr4_4:64568001-64568020 None:intergenic 35.0%
ATGAACTAATGCAACCCTTA+TGG + chr4_4:64568046-64568065 None:intergenic 35.0%
GAGTATATGAATGGGATATG+AGG + chr4_4:64568300-64568319 None:intergenic 35.0%
! TCGTTATTACTTTGGAGATG+TGG - chr4_4:64568318-64568337 Msa0695140:CDS 35.0%
! CGTTATTACTTTGGAGATGT+GGG - chr4_4:64568319-64568338 Msa0695140:CDS 35.0%
! TTGGTGAGTGTCATTCAATT+TGG - chr4_4:64568375-64568394 Msa0695140:intron 35.0%
! TGGTGAGTGTCATTCAATTT+GGG - chr4_4:64568376-64568395 Msa0695140:intron 35.0%
! AGTGTCATTCAATTTGGGAT+TGG - chr4_4:64568381-64568400 Msa0695140:intron 35.0%
! TATTTGGAATGTCTTGCCAA+GGG - chr4_4:64568600-64568619 Msa0695140:intron 35.0%
! GAGTTCTACTAGCTTCTTAA+TGG + chr4_4:64568640-64568659 None:intergenic 35.0%
! TCTATTTCTCTTTCTTCCAC+AGG + chr4_4:64568885-64568904 None:intergenic 35.0%
!! CTTTGGTAGCTTTAATGTGA+AGG + chr4_4:64569091-64569110 None:intergenic 35.0%
CACATTAAAGCTACCAAAGT+AGG - chr4_4:64569092-64569111 Msa0695140:intron 35.0%
TATCTGACTCAAGACTGTAT+CGG + chr4_4:64569120-64569139 None:intergenic 35.0%
! AAACTTTTGAATGGGAGCTT+TGG + chr4_4:64569171-64569190 None:intergenic 35.0%
ATAAAAACCATCCAAGAGCA+CGG + chr4_4:64569216-64569235 None:intergenic 35.0%
CAATACTATCAATGTAGGCA+GGG + chr4_4:64569279-64569298 None:intergenic 35.0%
! CTGCCTACATTGATAGTATT+GGG - chr4_4:64569278-64569297 Msa0695140:intron 35.0%
! CTTGAGAAGAGTATAGAAAG+AGG - chr4_4:64569335-64569354 Msa0695140:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr4_4:64569382-64569401 None:intergenic 35.0%
!! TTAGGCCCCAAATTTTAACA+TGG - chr4_4:64569398-64569417 Msa0695140:intron 35.0%
! TGAGAGAGTATATAAAGAGG+AGG - chr4_4:64569544-64569563 Msa0695140:intron 35.0%
!!! CGGTTTTTTAAGGATGAGTT+AGG - chr4_4:64569586-64569605 Msa0695140:intron 35.0%
AATATAGCCAATCCAAAGCT+TGG - chr4_4:64569663-64569682 Msa0695140:intron 35.0%
!! AAATGGAAGTATTTCCCACT+AGG + chr4_4:64569783-64569802 None:intergenic 35.0%
AGTTTGGATTCCATTCTTTG+TGG - chr4_4:64569841-64569860 Msa0695140:intron 35.0%
! TAACTCAGGTACCATTCTTT+TGG - chr4_4:64570232-64570251 Msa0695140:CDS 35.0%
AATGACAGAGCTACAATTGT+AGG + chr4_4:64570283-64570302 None:intergenic 35.0%
! TTGACACTATTGTGTTGGTA+AGG - chr4_4:64570304-64570323 Msa0695140:CDS 35.0%
ACATAAGGGCAAAAACAAAG+TGG + chr4_4:64570487-64570506 None:intergenic 35.0%
CCAGTTTAAGAAATTCTCCA+CGG + chr4_4:64570736-64570755 None:intergenic 35.0%
TGGAGAATTTCTTAAACTGG+TGG - chr4_4:64570736-64570755 Msa0695140:CDS 35.0%
AGTTGAGCTCATTGTCAAAA+AGG + chr4_4:64570899-64570918 None:intergenic 35.0%
ATAGGCATCATAGAAATGCA+AGG + chr4_4:64570958-64570977 None:intergenic 35.0%
!!! CCACCCTGATTTTAATTCAT+TGG + chr4_4:64571139-64571158 None:intergenic 35.0%
CCAATGAATTAAAATCAGGG+TGG - chr4_4:64571136-64571155 Msa0695140:intron 35.0%
! AAGGAATATGTTTTGTGGAG+AGG - chr4_4:64571281-64571300 Msa0695140:intron 35.0%
! AGGAATATGTTTTGTGGAGA+GGG - chr4_4:64571282-64571301 Msa0695140:intron 35.0%
TCCAAACGATTGCTTATTTG+AGG - chr4_4:64571364-64571383 Msa0695140:intron 35.0%
TCCTCAAATAAGCAATCGTT+TGG + chr4_4:64571368-64571387 None:intergenic 35.0%
!! GAGTATTGATTGGAGTCTTA+GGG - chr4_4:64571519-64571538 Msa0695140:intron 35.0%
!! AGTATTGATTGGAGTCTTAG+GGG - chr4_4:64571520-64571539 Msa0695140:intron 35.0%
AGAAGCTTCTGTTGTTATAG+AGG - chr4_4:64571562-64571581 Msa0695140:intron 35.0%
GAAGCTTCTGTTGTTATAGA+GGG - chr4_4:64571563-64571582 Msa0695140:intron 35.0%
TTATCTCCTGTAACCATTAC+AGG + chr4_4:64571611-64571630 None:intergenic 35.0%
TAATGGTTACAGGAGATAAC+TGG - chr4_4:64571612-64571631 Msa0695140:CDS 35.0%
!!! GCAAAAGATGTTGGTTTTCT+AGG + chr4_4:64571753-64571772 None:intergenic 35.0%
! GAAAACCAACATCTTTTGCA+TGG - chr4_4:64571754-64571773 Msa0695140:CDS 35.0%
ATGTTCCATGCAAAAGATGT+TGG + chr4_4:64571762-64571781 None:intergenic 35.0%
! AACATCTTTTGCATGGAACA+TGG - chr4_4:64571761-64571780 Msa0695140:CDS 35.0%
TGAAAAACAAAATTGAGCCG+TGG - chr4_4:64571804-64571823 Msa0695140:CDS 35.0%
TTGGGCAGATATTGATGTTA+TGG - chr4_4:64572048-64572067 Msa0695140:CDS 35.0%
GTTCGTTCATTCCAAAAAGA+TGG - chr4_4:64572159-64572178 Msa0695140:CDS 35.0%
AGATGGTAGTATAGTTGCAA+TGG - chr4_4:64572176-64572195 Msa0695140:CDS 35.0%
TGGTACGGCAATAATATTGT+AGG + chr4_4:64572397-64572416 None:intergenic 35.0%
GCACAAAATTGGAATCACAA+GGG + chr4_4:64572631-64572650 None:intergenic 35.0%
TGCACAAAATTGGAATCACA+AGG + chr4_4:64572632-64572651 None:intergenic 35.0%
TACATTTGAACAATGAGTGC+AGG + chr4_4:64572675-64572694 None:intergenic 35.0%
! ATGAGTTTGTTCATGGAGAT+AGG + chr4_4:64572749-64572768 None:intergenic 35.0%
AAGTGGAAGGTGATACAGAT+TGG + chr4_4:64566587-64566606 None:intergenic 40.0%
! AAGAGTTTTTCCGATGGAGA+TGG + chr4_4:64566672-64566691 None:intergenic 40.0%
ATGAGGTGAATACGAGAGAA+AGG + chr4_4:64566771-64566790 None:intergenic 40.0%
!!! GTTGACGTCGTTTTTATCGT+AGG + chr4_4:64566898-64566917 None:intergenic 40.0%
TAAACCGGTTGGAGATAGTA+CGG - chr4_4:64567266-64567285 Msa0695140:CDS 40.0%
CATCACCGGAGTAAAAAAAG+CGG - chr4_4:64567362-64567381 Msa0695140:intron 40.0%
!! GTGGCTTTAGCTACTTCATT+AGG - chr4_4:64567387-64567406 Msa0695140:intron 40.0%
!!! GAGATTGTTTTAGGGGTTGT+AGG - chr4_4:64567513-64567532 Msa0695140:intron 40.0%
GGTTGTAGGTGTTTGTTCTT+TGG - chr4_4:64567527-64567546 Msa0695140:intron 40.0%
TGTAGGTGTTTGTTCTTTGG+TGG - chr4_4:64567530-64567549 Msa0695140:intron 40.0%
! TTTGTTCTTTGGTGGATGCA+AGG - chr4_4:64567538-64567557 Msa0695140:intron 40.0%
! TTGTTCTTTGGTGGATGCAA+GGG - chr4_4:64567539-64567558 Msa0695140:intron 40.0%
TAGAAGCCATTCTCGCATAA+GGG + chr4_4:64567731-64567750 None:intergenic 40.0%
TTAGAAGCCATTCTCGCATA+AGG + chr4_4:64567732-64567751 None:intergenic 40.0%
CAGAGAGTTCGTCTATGTTT+CGG - chr4_4:64567760-64567779 Msa0695140:CDS 40.0%
CATTCTACACTAACACCCTA+AGG + chr4_4:64567972-64567991 None:intergenic 40.0%
ATCAGCAGAATCAGAAAGGA+TGG + chr4_4:64567997-64568016 None:intergenic 40.0%
TGGAGCATAAAATTCTGTGG+AGG + chr4_4:64568026-64568045 None:intergenic 40.0%
AATTACCCCCATGAAGAAGA+GGG + chr4_4:64568274-64568293 None:intergenic 40.0%
AAATTACCCCCATGAAGAAG+AGG + chr4_4:64568275-64568294 None:intergenic 40.0%
AACCAATCATCCATGAGGAA+AGG + chr4_4:64568345-64568364 None:intergenic 40.0%
ACTTCAACCAATCATCCATG+AGG + chr4_4:64568350-64568369 None:intergenic 40.0%
! TCATGGATGATTGGTTGAAG+TGG - chr4_4:64568349-64568368 Msa0695140:CDS 40.0%
! CATGGATGATTGGTTGAAGT+GGG - chr4_4:64568350-64568369 Msa0695140:CDS 40.0%
GCTTTCAGAGCTCTTAGAAA+TGG - chr4_4:64568423-64568442 Msa0695140:intron 40.0%
!! ATGGATGTCCTTGTTGCTTT+GGG - chr4_4:64568456-64568475 Msa0695140:intron 40.0%
TCTGTTTGTGCTCTTCTGTA+TGG - chr4_4:64568501-64568520 Msa0695140:intron 40.0%
! GTATTTGGAATGTCTTGCCA+AGG - chr4_4:64568599-64568618 Msa0695140:intron 40.0%
! ATTTGGAATGTCTTGCCAAG+GGG - chr4_4:64568601-64568620 Msa0695140:intron 40.0%
ACAACCAATAAAGCTGTTGC+AGG + chr4_4:64568666-64568685 None:intergenic 40.0%
! GTCACTAGGTTGAATAAGCA+AGG + chr4_4:64568910-64568929 None:intergenic 40.0%
GACACATTAAAAGTTCTGCC+TGG - chr4_4:64568927-64568946 Msa0695140:CDS 40.0%
ATTTACATAACTTGAGCCCC+AGG + chr4_4:64568982-64569001 None:intergenic 40.0%
! GTAAATGAGAGTATGGTGAC+TGG - chr4_4:64568996-64569015 Msa0695140:intron 40.0%
GAGATCAATGCATCTGTCAT+TGG - chr4_4:64569041-64569060 Msa0695140:intron 40.0%
ATCAATGCATCTGTCATTGG+AGG - chr4_4:64569044-64569063 Msa0695140:intron 40.0%
AAGGACACCATGCAAATTGA+TGG + chr4_4:64569072-64569091 None:intergenic 40.0%
CCAATACTATCAATGTAGGC+AGG + chr4_4:64569280-64569299 None:intergenic 40.0%
! CCTGCCTACATTGATAGTAT+TGG - chr4_4:64569277-64569296 Msa0695140:intron 40.0%
! GAGTCTTATCTATCCGATGT+GGG + chr4_4:64569316-64569335 None:intergenic 40.0%
! AGAGTCTTATCTATCCGATG+TGG + chr4_4:64569317-64569336 None:intergenic 40.0%
! GAGAAGAGTATAGAAAGAGG+AGG - chr4_4:64569338-64569357 Msa0695140:intron 40.0%
!! CCTTACAAAACCGGTTTGTA+AGG + chr4_4:64569373-64569392 None:intergenic 40.0%
!! CCTTACAAACCGGTTTTGTA+AGG - chr4_4:64569370-64569389 Msa0695140:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr4_4:64569380-64569399 Msa0695140:intron 40.0%
ATCAGAGCTTGTCGAATTCA+AGG - chr4_4:64569422-64569441 Msa0695140:intron 40.0%
TCAGAGCTTGTCGAATTCAA+GGG - chr4_4:64569423-64569442 Msa0695140:intron 40.0%
!! CCTTAAAAAACCGGCTTGTA+AGG + chr4_4:64569579-64569598 None:intergenic 40.0%
!!! CCTTACAAGCCGGTTTTTTA+AGG - chr4_4:64569576-64569595 Msa0695140:intron 40.0%
!! TCTTTCTCCAAGCTTTGGAT+TGG + chr4_4:64569673-64569692 None:intergenic 40.0%
AATCCAAAGCTTGGAGAAAG+AGG - chr4_4:64569672-64569691 Msa0695140:intron 40.0%
CACAATGAGTTGCAAAGAGT+CGG - chr4_4:64569929-64569948 Msa0695140:intron 40.0%
!!! AGTCGGCATTTAGTTTTCCT+GGG - chr4_4:64569946-64569965 Msa0695140:intron 40.0%
ATCCTTAGAAAGAGCTCAGA+TGG - chr4_4:64570625-64570644 Msa0695140:intron 40.0%
TAAGACAGGAACTCTAACTC+AGG - chr4_4:64570667-64570686 Msa0695140:intron 40.0%
AAGACAGGAACTCTAACTCA+GGG - chr4_4:64570668-64570687 Msa0695140:intron 40.0%
CCGTGGAGAATTTCTTAAAC+TGG - chr4_4:64570733-64570752 Msa0695140:CDS 40.0%
AGCAGAGAGTAACCATCATT+GGG + chr4_4:64570779-64570798 None:intergenic 40.0%
AAGCAGAGAGTAACCATCAT+TGG + chr4_4:64570780-64570799 None:intergenic 40.0%
TGCGTATGCGACAATACAAA+AGG + chr4_4:64570814-64570833 None:intergenic 40.0%
CTCATTGTCAAAAAGGTGGA+AGG + chr4_4:64570892-64570911 None:intergenic 40.0%
TGAGCTCATTGTCAAAAAGG+TGG + chr4_4:64570896-64570915 None:intergenic 40.0%
!! TGTAATATCGCTTTTGCCAG+CGG + chr4_4:64571054-64571073 None:intergenic 40.0%
! TGAGGAAGTATGTTCTGATC+AGG - chr4_4:64571382-64571401 Msa0695140:intron 40.0%
GAAGTATGTTCTGATCAGGT+TGG - chr4_4:64571386-64571405 Msa0695140:intron 40.0%
!! TTGAAGAAAGTGCCAAGACT+GGG - chr4_4:64571477-64571496 Msa0695140:intron 40.0%
!! GGAGTATTGATTGGAGTCTT+AGG - chr4_4:64571518-64571537 Msa0695140:intron 40.0%
AACAAAATTGAGCCGTGGAT+AGG - chr4_4:64571809-64571828 Msa0695140:CDS 40.0%
ACAAAATTGAGCCGTGGATA+GGG - chr4_4:64571810-64571829 Msa0695140:CDS 40.0%
CTTGAAAACGAGACCAGTTA+TGG + chr4_4:64571876-64571895 None:intergenic 40.0%
AGGTTGGCATTCAAGATGTT+AGG - chr4_4:64572103-64572122 Msa0695140:CDS 40.0%
GGTTGGCATTCAAGATGTTA+GGG - chr4_4:64572104-64572123 Msa0695140:CDS 40.0%
TGGTAGTATAGTTGCAATGG+TGG - chr4_4:64572179-64572198 Msa0695140:CDS 40.0%
GGTAGTATAGTTGCAATGGT+GGG - chr4_4:64572180-64572199 Msa0695140:CDS 40.0%
GGCAATAATATTGTAGGCCA+TGG + chr4_4:64572391-64572410 None:intergenic 40.0%
CAGTGAAGGAAATAAAACCC+CGG + chr4_4:64572427-64572446 None:intergenic 40.0%
!!! GGGGTTTTATTTCCTTCACT+GGG - chr4_4:64572426-64572445 Msa0695140:CDS 40.0%
! TACAAAGGGTGCAAATGAGT+TGG - chr4_4:64572604-64572623 Msa0695140:exon 40.0%
TGTTCATGGAGATAGGTAGA+GGG + chr4_4:64572742-64572761 None:intergenic 40.0%
TTGTTCATGGAGATAGGTAG+AGG + chr4_4:64572743-64572762 None:intergenic 40.0%
AGTGTATCTCATATGTGCGT+TGG - chr4_4:64572802-64572821 Msa0695140:five_prime_UTR 40.0%
!! TGCTGTTTCACCATCTCCAT+CGG - chr4_4:64566659-64566678 Msa0695140:three_prime_UTR 45.0%
CTCTCTCTCTCGAGAAATCA+TGG - chr4_4:64566797-64566816 Msa0695140:three_prime_UTR 45.0%
AAAAACGACGTCAACGACGA+CGG - chr4_4:64566903-64566922 Msa0695140:CDS 45.0%
!!! GTTTTGAAGTAAAGCGACGG+AGG + chr4_4:64567027-64567046 None:intergenic 45.0%
TGTTTCAACCGGACCTAAAC+CGG - chr4_4:64567251-64567270 Msa0695140:CDS 45.0%
! GTACTATCTCCAACCGGTTT+AGG + chr4_4:64567267-64567286 None:intergenic 45.0%
!!! CACCACCGCTTTTTTTACTC+CGG + chr4_4:64567370-64567389 None:intergenic 45.0%
!! TTTGGTGGATGCAAGGGTTT+TGG - chr4_4:64567545-64567564 Msa0695140:intron 45.0%
TTAGTGGTATGAAAGGGGTG+AGG - chr4_4:64567577-64567596 Msa0695140:intron 45.0%
TAGAAGCCCTTATGCGAGAA+TGG - chr4_4:64567722-64567741 Msa0695140:intron 45.0%
! GCGAGAATGGCTTCTAAAGA+TGG - chr4_4:64567735-64567754 Msa0695140:intron 45.0%
ACTCACACTAAGAAGCAAGC+TGG + chr4_4:64567796-64567815 None:intergenic 45.0%
TCAGATTCCCCTCTTCTTCA+TGG - chr4_4:64568263-64568282 Msa0695140:CDS 45.0%
CAGATTCCCCTCTTCTTCAT+GGG - chr4_4:64568264-64568283 Msa0695140:CDS 45.0%
AGATTCCCCTCTTCTTCATG+GGG - chr4_4:64568265-64568284 Msa0695140:CDS 45.0%
ATTACCCCCATGAAGAAGAG+GGG + chr4_4:64568273-64568292 None:intergenic 45.0%
! TGATTGGTTGAAGTGGGCAT+TGG - chr4_4:64568356-64568375 Msa0695140:CDS 45.0%
! CATGGATGTCCTTGTTGCTT+TGG - chr4_4:64568455-64568474 Msa0695140:intron 45.0%
CTGTAGTTCCCAAAGCAACA+AGG + chr4_4:64568467-64568486 None:intergenic 45.0%
! ATGGCGCTCTTACTGGATTT+TGG - chr4_4:64568520-64568539 Msa0695140:intron 45.0%
! CACTCCTGCAACAGCTTTAT+TGG - chr4_4:64568659-64568678 Msa0695140:CDS 45.0%
! TTTTCTAGATGGCAGACCTG+TGG - chr4_4:64568866-64568885 Msa0695140:CDS 45.0%
CAGGTAACAATACCATCAGC+GGG + chr4_4:64568963-64568982 None:intergenic 45.0%
CCAGGTAACAATACCATCAG+CGG + chr4_4:64568964-64568983 None:intergenic 45.0%
CGCTGATGGTATTGTTACCT+GGG - chr4_4:64568962-64568981 Msa0695140:CDS 45.0%
GCTGATGGTATTGTTACCTG+GGG - chr4_4:64568963-64568982 Msa0695140:CDS 45.0%
CGAGTCTATACCTGTTTCGA+AGG - chr4_4:64569019-64569038 Msa0695140:intron 45.0%
! GCATTGATCTCCTTCGAAAC+AGG + chr4_4:64569032-64569051 None:intergenic 45.0%
!! GGAGGTACCATCAATTTGCA+TGG - chr4_4:64569062-64569081 Msa0695140:intron 45.0%
GACTGTATCGGATCCTACTT+TGG + chr4_4:64569108-64569127 None:intergenic 45.0%
!! AATGGGAGCTTTGGACATCT+GGG + chr4_4:64569162-64569181 None:intergenic 45.0%
GAAAAACCCAAGTCCCACAT+CGG - chr4_4:64569300-64569319 Msa0695140:intron 45.0%
ATCTATCCGATGTGGGACTT+GGG + chr4_4:64569309-64569328 None:intergenic 45.0%
TATCTATCCGATGTGGGACT+TGG + chr4_4:64569310-64569329 None:intergenic 45.0%
GCAATGCTCACCTTACAAAC+CGG - chr4_4:64569360-64569379 Msa0695140:intron 45.0%
! CTTGGTGCGTGAATAGGTTT+AGG + chr4_4:64569452-64569471 None:intergenic 45.0%
GAAAAACCCAAGTCCCACAT+CGG - chr4_4:64569300-64569319 Msa0695140:intron 45.0%
ATCTATCCGATGTGGGACTT+GGG + chr4_4:64569309-64569328 None:intergenic 45.0%
TATCTATCCGATGTGGGACT+TGG + chr4_4:64569310-64569329 None:intergenic 45.0%
AGTCCCACATCGGATAGATA+AGG - chr4_4:64569310-64569329 Msa0695140:intron 45.0%
! GAGCCTTATCTATCCGATGT+GGG + chr4_4:64569523-64569542 None:intergenic 45.0%
! AGAGCCTTATCTATCCGATG+TGG + chr4_4:64569524-64569543 None:intergenic 45.0%
!! AAAAACCGGCTTGTAAGGTG+AGG + chr4_4:64569574-64569593 None:intergenic 45.0%
CAAAGCTTGGAGAAAGAGGA+GGG - chr4_4:64569676-64569695 Msa0695140:intron 45.0%
TCTGTTGAATCCCTGTGACA+TGG - chr4_4:64569732-64569751 Msa0695140:intron 45.0%
CATTGCTAGTCCATGTCACA+GGG + chr4_4:64569745-64569764 None:intergenic 45.0%
ACATTGCTAGTCCATGTCAC+AGG + chr4_4:64569746-64569765 None:intergenic 45.0%
!! TGGAAGTATTTCCCACTAGG+CGG + chr4_4:64569780-64569799 None:intergenic 45.0%
!!! GAGTCGGCATTTAGTTTTCC+TGG - chr4_4:64569945-64569964 Msa0695140:intron 45.0%
!!! GTACCATTCTTTTGGCTTGC+AGG - chr4_4:64570240-64570259 Msa0695140:CDS 45.0%
CTACCTGCAAGCCAAAAGAA+TGG + chr4_4:64570246-64570265 None:intergenic 45.0%
TTGGAGCATACCCAGATGAA+TGG - chr4_4:64570444-64570463 Msa0695140:CDS 45.0%
! TTTTCGGCAGCCATTCATCT+GGG + chr4_4:64570457-64570476 None:intergenic 45.0%
!! TTTTTCGGCAGCCATTCATC+TGG + chr4_4:64570458-64570477 None:intergenic 45.0%
GATGAATGGCTGCCGAAAAA+TGG - chr4_4:64570458-64570477 Msa0695140:CDS 45.0%
CACCATCTGAGCTCTTTCTA+AGG + chr4_4:64570630-64570649 None:intergenic 45.0%
!! GTAATATCGCTTTTGCCAGC+GGG + chr4_4:64571053-64571072 None:intergenic 45.0%
GATGAGTCCTCTCTTACCAA+TGG - chr4_4:64571099-64571118 Msa0695140:CDS 45.0%
TTGGGATCCATTGGTAAGAG+AGG + chr4_4:64571109-64571128 None:intergenic 45.0%
!!! GGCATCATTTTGGGATCCAT+TGG + chr4_4:64571118-64571137 None:intergenic 45.0%
TGGAATAGCAGAGAAGTCTG+AGG + chr4_4:64571172-64571191 None:intergenic 45.0%
TCAGACTTCTCTGCTATTCC+AGG - chr4_4:64571171-64571190 Msa0695140:intron 45.0%
ACTTCTCTGCTATTCCAGGA+AGG - chr4_4:64571175-64571194 Msa0695140:intron 45.0%
CTTCTCTGCTATTCCAGGAA+GGG - chr4_4:64571176-64571195 Msa0695140:intron 45.0%
TTCTCTGCTATTCCAGGAAG+GGG - chr4_4:64571177-64571196 Msa0695140:intron 45.0%
GGTGTGCAGTGCATTATAGA+CGG - chr4_4:64571198-64571217 Msa0695140:intron 45.0%
! TATAGACGGACAGCGTGTTT+TGG - chr4_4:64571212-64571231 Msa0695140:intron 45.0%
AGGGACACATGTCTCATTAG+AGG - chr4_4:64571301-64571320 Msa0695140:intron 45.0%
!! GTTCTGATCAGGTTGGTAAC+AGG - chr4_4:64571393-64571412 Msa0695140:intron 45.0%
!! CTTGAAGAAAGTGCCAAGAC+TGG - chr4_4:64571476-64571495 Msa0695140:intron 45.0%
ATACTCCATTGCACGCTACA+AGG + chr4_4:64571505-64571524 None:intergenic 45.0%
!! GCGTGCAATGGAGTATTGAT+TGG - chr4_4:64571509-64571528 Msa0695140:intron 45.0%
TATAGAGGGCCTCCAGAAAA+TGG - chr4_4:64571577-64571596 Msa0695140:intron 45.0%
ATAGAGGGCCTCCAGAAAAT+GGG - chr4_4:64571578-64571597 Msa0695140:intron 45.0%
AATGGGAATCACGCCTGTAA+TGG - chr4_4:64571595-64571614 Msa0695140:intron 45.0%
ATCACGCCTGTAATGGTTAC+AGG - chr4_4:64571602-64571621 Msa0695140:intron 45.0%
CATTCAAGATGTTAGGGCAG+AGG - chr4_4:64572110-64572129 Msa0695140:CDS 45.0%
!! ATAGTTGCAATGGTGGGTGA+CGG - chr4_4:64572186-64572205 Msa0695140:CDS 45.0%
GCAGATGTTGGTATGGCAAT+TGG - chr4_4:64572237-64572256 Msa0695140:intron 45.0%
TTGGTATGGCAATTGGAGCT+GGG - chr4_4:64572244-64572263 Msa0695140:intron 45.0%
!!! CGGGGTTTTATTTCCTTCAC+TGG - chr4_4:64572425-64572444 Msa0695140:CDS 45.0%
! CGGACACATGAGTTTGTTCA+TGG + chr4_4:64572756-64572775 None:intergenic 45.0%
CAAACTCATGTGTCCGTTCA+TGG - chr4_4:64572760-64572779 Msa0695140:five_prime_UTR 45.0%
CACAATGTTATTGACGCCTC+AGG - chr4_4:64572828-64572847 Msa0695140:five_prime_UTR 45.0%
!!! AATATATTTTATTTAAATTC+AGG - chr4_4:64571014-64571033 Msa0695140:CDS 5.0%
GAGAGAGAGAGAATGCGATG+AGG + chr4_4:64566788-64566807 None:intergenic 50.0%
GATTCTGACCTGAATCCGGT+TGG + chr4_4:64566931-64566950 None:intergenic 50.0%
CGGTGATTCTGACCTGAATC+CGG + chr4_4:64566935-64566954 None:intergenic 50.0%
CGGATTCAGGTCAGAATCAC+CGG - chr4_4:64566933-64566952 Msa0695140:CDS 50.0%
TTCGACGGAGTTAGAGCAAG+CGG + chr4_4:64566970-64566989 None:intergenic 50.0%
GGCTTGAATTACACCGTCGA+CGG + chr4_4:64567006-64567025 None:intergenic 50.0%
GGTTTAGGTCCGGTTGAAAC+AGG + chr4_4:64567252-64567271 None:intergenic 50.0%
! ATCTCCAACCGGTTTAGGTC+CGG + chr4_4:64567262-64567281 None:intergenic 50.0%
ACCACCGTACTATCTCCAAC+CGG + chr4_4:64567273-64567292 None:intergenic 50.0%
GTTGGAGATAGTACGGTGGT+TGG - chr4_4:64567273-64567292 Msa0695140:CDS 50.0%
GTGGTTGGACAGTTCACGAT+CGG - chr4_4:64567288-64567307 Msa0695140:CDS 50.0%
GCGTGTGTGAATTCCGTTGA+AGG - chr4_4:64567327-64567346 Msa0695140:intron 50.0%
CACCGGAGTAAAAAAAGCGG+TGG - chr4_4:64567365-64567384 Msa0695140:intron 50.0%
CGGAGTAAAAAAAGCGGTGG+TGG - chr4_4:64567368-64567387 Msa0695140:intron 50.0%
TGAAAGGGGTGAGGCAGTTT+CGG - chr4_4:64567586-64567605 Msa0695140:intron 50.0%
GATTCCCCTCTTCTTCATGG+GGG - chr4_4:64568266-64568285 Msa0695140:CDS 50.0%
GGCCTTTCCTCATGGATGAT+TGG - chr4_4:64568340-64568359 Msa0695140:CDS 50.0%
CTTCTGTATGGCGCTCTTAC+TGG - chr4_4:64568513-64568532 Msa0695140:intron 50.0%
TCAGCGGGAATCTTTGTACC+AGG + chr4_4:64568948-64568967 None:intergenic 50.0%
GGTACAAAGATTCCCGCTGA+TGG - chr4_4:64568948-64568967 Msa0695140:CDS 50.0%
CCGCTGATGGTATTGTTACC+TGG - chr4_4:64568961-64568980 Msa0695140:CDS 50.0%
!! GAATGGGAGCTTTGGACATC+TGG + chr4_4:64569163-64569182 None:intergenic 50.0%
! AAGTATTGTGGCCGTGCTCT+TGG - chr4_4:64569202-64569221 Msa0695140:intron 50.0%
GGTGCGTGAATAGGTTTAGG+CGG + chr4_4:64569449-64569468 None:intergenic 50.0%
!! TTTGGGCTTGGTGCGTGAAT+AGG + chr4_4:64569458-64569477 None:intergenic 50.0%
GCAATCCTCACCTTACAAGC+CGG - chr4_4:64569566-64569585 Msa0695140:intron 50.0%
CCTCCTCTTTCTCCAAGCTT+TGG + chr4_4:64569678-64569697 None:intergenic 50.0%
CCAAAGCTTGGAGAAAGAGG+AGG - chr4_4:64569675-64569694 Msa0695140:intron 50.0%
! GAAGTATTTCCCACTAGGCG+GGG + chr4_4:64569778-64569797 None:intergenic 50.0%
!! GGAAGTATTTCCCACTAGGC+GGG + chr4_4:64569779-64569798 None:intergenic 50.0%
! ATTTTCCAGAACAGCAGCCC+AGG + chr4_4:64569966-64569985 None:intergenic 50.0%
TAAGGAGCTCCAACGATCAG+GGG + chr4_4:64570037-64570056 None:intergenic 50.0%
GTAAGGAGCTCCAACGATCA+GGG + chr4_4:64570038-64570057 None:intergenic 50.0%
TGTAAGGAGCTCCAACGATC+AGG + chr4_4:64570039-64570058 None:intergenic 50.0%
ATTGCATGCCCATGTGCACT+TGG - chr4_4:64570527-64570546 Msa0695140:CDS 50.0%
ATGCCCATGTGCACTTGGTT+TGG - chr4_4:64570532-64570551 Msa0695140:intron 50.0%
TCGCCAAACCAAGTGCACAT+GGG + chr4_4:64570538-64570557 None:intergenic 50.0%
TCATGGTGGCAACAGGTGTT+GGG - chr4_4:64570570-64570589 Msa0695140:intron 50.0%
!! ACAGGTGTTGGGGCTAACAA+TGG - chr4_4:64570581-64570600 Msa0695140:intron 50.0%
! TCTGTTGCCAAGGTGTTTGC+AGG - chr4_4:64570704-64570723 Msa0695140:intron 50.0%
! TGCCAAGGTGTTTGCAGGAA+TGG - chr4_4:64570709-64570728 Msa0695140:intron 50.0%
GTCCATTCCTGCAAACACCT+TGG + chr4_4:64570714-64570733 None:intergenic 50.0%
TAAACTGGTGGCTTCTGCTG+AGG - chr4_4:64570748-64570767 Msa0695140:CDS 50.0%
GCTGAGGTAACTCCCAATGA+TGG - chr4_4:64570764-64570783 Msa0695140:CDS 50.0%
! GCGTGATTCCCATTTTCTGG+AGG + chr4_4:64571589-64571608 None:intergenic 50.0%
! CAGGCGTGATTCCCATTTTC+TGG + chr4_4:64571592-64571611 None:intergenic 50.0%
AGAGGTTATGCCTGCAGGAA+AGG - chr4_4:64572128-64572147 Msa0695140:CDS 50.0%
ACATCTGCAGCAGCTAATGC+AGG + chr4_4:64572225-64572244 None:intergenic 50.0%
GCATTAGCTGCTGCAGATGT+TGG - chr4_4:64572225-64572244 Msa0695140:intron 50.0%
AGCTGCTGCAGATGTTGGTA+TGG - chr4_4:64572230-64572249 Msa0695140:intron 50.0%
GTTGGTATGGCAATTGGAGC+TGG - chr4_4:64572243-64572262 Msa0695140:intron 50.0%
AATAAAACCCCGGCAGCAAC+TGG + chr4_4:64572417-64572436 None:intergenic 50.0%
GGAAGCTTGATTCCCAGTGA+AGG + chr4_4:64572441-64572460 None:intergenic 50.0%
TGGGAATCAAGCTTCCACCA+TGG - chr4_4:64572445-64572464 Msa0695140:CDS 50.0%
GGGAATCAAGCTTCCACCAT+GGG - chr4_4:64572446-64572465 Msa0695140:CDS 50.0%
GCGAACATCTTCGAGATCGC+CGG + chr4_4:64566865-64566884 None:intergenic 55.0%
TCAACGACGACGGAACCAAC+CGG - chr4_4:64566913-64566932 Msa0695140:CDS 55.0%
TCAACCGGACCTAAACCGGT+TGG - chr4_4:64567255-64567274 Msa0695140:CDS 55.0%
ACCGGTTGGAGATAGTACGG+TGG - chr4_4:64567269-64567288 Msa0695140:CDS 55.0%
GTTGGACAGTTCACGATCGG+CGG - chr4_4:64567291-64567310 Msa0695140:CDS 55.0%
GATCGGCGGTATGACATGTG+CGG - chr4_4:64567305-64567324 Msa0695140:intron 55.0%
GAGATGTGGGCCTTTCCTCA+TGG - chr4_4:64568332-64568351 Msa0695140:CDS 55.0%
GGCATCAGATGTCTTCCCCT+TGG + chr4_4:64568619-64568638 None:intergenic 55.0%
ATTGTGGCCGTGCTCTTGGA+TGG - chr4_4:64569206-64569225 Msa0695140:intron 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG - chr4_4:64569465-64569484 Msa0695140:intron 55.0%
! TGATAGTGTTCCCCGCCTAG+TGG - chr4_4:64569765-64569784 Msa0695140:intron 55.0%
GATAGTGTTCCCCGCCTAGT+GGG - chr4_4:64569766-64569785 Msa0695140:intron 55.0%
! GTTTTCCTGGGCTGCTGTTC+TGG - chr4_4:64569958-64569977 Msa0695140:intron 55.0%
AGGTATACTGCTGGGGCTCT+TGG - chr4_4:64570425-64570444 Msa0695140:CDS 55.0%
GTCGCCAAACCAAGTGCACA+TGG + chr4_4:64570539-64570558 None:intergenic 55.0%
GTTGCCACCATGACAGCAGT+TGG + chr4_4:64570563-64570582 None:intergenic 55.0%
ACTGCTGTCATGGTGGCAAC+AGG - chr4_4:64570563-64570582 Msa0695140:intron 55.0%
GTCATGGTGGCAACAGGTGT+TGG - chr4_4:64570569-64570588 Msa0695140:intron 55.0%
! CATGGTGGCAACAGGTGTTG+GGG - chr4_4:64570571-64570590 Msa0695140:intron 55.0%
AGCCACTGTCTCTGTTGCCA+AGG - chr4_4:64570694-64570713 Msa0695140:intron 55.0%
CACCTTGGCAACAGAGACAG+TGG + chr4_4:64570699-64570718 None:intergenic 55.0%
GTGTTTGCAGGAATGGACCG+TGG - chr4_4:64570716-64570735 Msa0695140:intron 55.0%
!! GGTTGGTAACAGGAAGCTGC+TGG - chr4_4:64571403-64571422 Msa0695140:intron 55.0%
TGGTAACAGGAAGCTGCTGG+TGG - chr4_4:64571406-64571425 Msa0695140:intron 55.0%
AGGAAGCTGCTGGTGGAAAG+TGG - chr4_4:64571413-64571432 Msa0695140:intron 55.0%
CGCTACAAGGATCCCAGTCT+TGG + chr4_4:64571492-64571511 None:intergenic 55.0%
GGGATCCTTGTAGCGTGCAA+TGG - chr4_4:64571497-64571516 Msa0695140:intron 55.0%
AACTGCTCGAGCTGTTGCCA+AGG - chr4_4:64571637-64571656 Msa0695140:CDS 55.0%
ACCACATCAGCCTTTCCTGC+AGG + chr4_4:64572141-64572160 None:intergenic 55.0%
ATTGCCGTACCAGTTGCTGC+CGG - chr4_4:64572405-64572424 Msa0695140:CDS 55.0%
! AAGCTTCCACCATGGGTTGC+TGG - chr4_4:64572453-64572472 Msa0695140:CDS 55.0%
ATGCATGCACCAGCAACCCA+TGG + chr4_4:64572465-64572484 None:intergenic 55.0%
! ATGGGTTGCTGGTGCATGCA+TGG - chr4_4:64572464-64572483 Msa0695140:CDS 55.0%
GAACAATGAGTGCAGGCGAG+AGG + chr4_4:64572668-64572687 None:intergenic 55.0%
CAACTAACTTCCACCGGCGC+CGG - chr4_4:64566831-64566850 Msa0695140:exon 60.0%
CGACGGAACCAACCGGATTC+AGG - chr4_4:64566920-64566939 Msa0695140:CDS 60.0%
GGACATGAGAGCGGCTTCGA+CGG + chr4_4:64566985-64567004 None:intergenic 60.0%
ACCGTCGACGGACATGAGAG+CGG + chr4_4:64566994-64567013 None:intergenic 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG - chr4_4:64569464-64569483 Msa0695140:intron 60.0%
CCTCACGCCCAGCACTCTTT+GGG + chr4_4:64569475-64569494 None:intergenic 60.0%
!! CCAAAGAGTGCTGGGCGTGA+GGG - chr4_4:64569473-64569492 Msa0695140:intron 60.0%
!! CAAAGAGTGCTGGGCGTGAG+GGG - chr4_4:64569474-64569493 Msa0695140:intron 60.0%
!! AAAGAGTGCTGGGCGTGAGG+GGG - chr4_4:64569475-64569494 Msa0695140:intron 60.0%
GATGCCTTGCCCCTGATCGT+TGG - chr4_4:64570025-64570044 Msa0695140:intron 60.0%
AGCTCCAACGATCAGGGGCA+AGG + chr4_4:64570032-64570051 None:intergenic 60.0%
ATGCACTGCACACCCCTTCC+TGG + chr4_4:64571192-64571211 None:intergenic 60.0%
TGCTCGAGCTGTTGCCAAGG+AGG - chr4_4:64571640-64571659 Msa0695140:CDS 60.0%
AGGGCAGAGGTTATGCCTGC+AGG - chr4_4:64572123-64572142 Msa0695140:CDS 60.0%
GCCTGCAGGAAAGGCTGATG+TGG - chr4_4:64572137-64572156 Msa0695140:CDS 60.0%
TTGCCGTACCAGTTGCTGCC+GGG - chr4_4:64572406-64572425 Msa0695140:CDS 60.0%
AACCCCGGCAGCAACTGGTA+CGG + chr4_4:64572412-64572431 None:intergenic 60.0%
CATGCACCAGCAACCCATGG+TGG + chr4_4:64572462-64572481 None:intergenic 60.0%
GAGATCGCCGGAGTCATCGC+CGG + chr4_4:64566853-64566872 None:intergenic 65.0%
GGAGTTAGAGCAAGCGGCGC+AGG + chr4_4:64566964-64566983 None:intergenic 65.0%
GCCGCTCTCATGTCCGTCGA+CGG - chr4_4:64566990-64567009 Msa0695140:CDS 65.0%
CGCCCAGCACTCTTTGGGCT+TGG + chr4_4:64569470-64569489 None:intergenic 65.0%
!! CCCAAAGAGTGCTGGGCGTG+AGG - chr4_4:64569472-64569491 Msa0695140:intron 65.0%
CCCTCACGCCCAGCACTCTT+TGG + chr4_4:64569476-64569495 None:intergenic 65.0%
!! AAGAGTGCTGGGCGTGAGGG+GGG - chr4_4:64569476-64569495 Msa0695140:intron 65.0%
! TGGGCGTGAGGGGGGTGTAT+TGG - chr4_4:64569484-64569503 Msa0695140:intron 65.0%
! GGGCGTGAGGGGGGTGTATT+GGG - chr4_4:64569485-64569504 Msa0695140:intron 65.0%
GGCTAGCAGTGAACACCCGC+TGG - chr4_4:64571035-64571054 Msa0695140:CDS 65.0%
TGCCGTACCAGTTGCTGCCG+GGG - chr4_4:64572407-64572426 Msa0695140:CDS 65.0%
GTGCAGGCGAGAGGAGCTCA+AGG + chr4_4:64572659-64572678 None:intergenic 65.0%
GCAAGCGGCGCAGGTCATGC+CGG + chr4_4:64566955-64566974 None:intergenic 70.0%
!! ACCGGCGCCGGCGATGACTC+CGG - chr4_4:64566843-64566862 Msa0695140:CDS 75.0%
!! GGAGTCATCGCCGGCGCCGG+TGG + chr4_4:64566844-64566863 None:intergenic 80.0%
! GCCGGAGTCATCGCCGGCGC+CGG + chr4_4:64566847-64566866 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 64566559 64572861 64566559 ID=Msa0695140;Name=Msa0695140
chr4_4 mRNA 64566559 64572861 64566559 ID=Msa0695140-mRNA-1;Parent=Msa0695140;Name=Msa0695140-mRNA-1;_AED=0.07;_eAED=0.07;_QI=257|1|1|1|1|1|9|280|992
chr4_4 exon 64566559 64567315 64566559 ID=Msa0695140-mRNA-1:exon:18512;Parent=Msa0695140-mRNA-1
chr4_4 exon 64567759 64568016 64567759 ID=Msa0695140-mRNA-1:exon:18511;Parent=Msa0695140-mRNA-1
chr4_4 exon 64568187 64568384 64568187 ID=Msa0695140-mRNA-1:exon:18510;Parent=Msa0695140-mRNA-1
chr4_4 exon 64568651 64568993 64568651 ID=Msa0695140-mRNA-1:exon:18509;Parent=Msa0695140-mRNA-1
chr4_4 exon 64569100 64569158 64569100 ID=Msa0695140-mRNA-1:exon:18508;Parent=Msa0695140-mRNA-1
chr4_4 exon 64570221 64570546 64570221 ID=Msa0695140-mRNA-1:exon:18507;Parent=Msa0695140-mRNA-1
chr4_4 exon 64570724 64571153 64570724 ID=Msa0695140-mRNA-1:exon:18506;Parent=Msa0695140-mRNA-1
chr4_4 exon 64571611 64572231 64571611 ID=Msa0695140-mRNA-1:exon:18505;Parent=Msa0695140-mRNA-1
chr4_4 exon 64572338 64572861 64572338 ID=Msa0695140-mRNA-1:exon:18504;Parent=Msa0695140-mRNA-1
chr4_4 five_prime_UTR 64572605 64572861 64572605 ID=Msa0695140-mRNA-1:five_prime_utr;Parent=Msa0695140-mRNA-1
chr4_4 CDS 64572338 64572604 64572338 ID=Msa0695140-mRNA-1:cds;Parent=Msa0695140-mRNA-1
chr4_4 CDS 64571611 64572231 64571611 ID=Msa0695140-mRNA-1:cds;Parent=Msa0695140-mRNA-1
chr4_4 CDS 64570724 64571153 64570724 ID=Msa0695140-mRNA-1:cds;Parent=Msa0695140-mRNA-1
chr4_4 CDS 64570221 64570546 64570221 ID=Msa0695140-mRNA-1:cds;Parent=Msa0695140-mRNA-1
chr4_4 CDS 64569100 64569158 64569100 ID=Msa0695140-mRNA-1:cds;Parent=Msa0695140-mRNA-1
chr4_4 CDS 64568651 64568993 64568651 ID=Msa0695140-mRNA-1:cds;Parent=Msa0695140-mRNA-1
chr4_4 CDS 64568187 64568384 64568187 ID=Msa0695140-mRNA-1:cds;Parent=Msa0695140-mRNA-1
chr4_4 CDS 64567759 64568016 64567759 ID=Msa0695140-mRNA-1:cds;Parent=Msa0695140-mRNA-1
chr4_4 CDS 64566839 64567315 64566839 ID=Msa0695140-mRNA-1:cds;Parent=Msa0695140-mRNA-1
chr4_4 three_prime_UTR 64566559 64566838 64566559 ID=Msa0695140-mRNA-1:three_prime_utr;Parent=Msa0695140-mRNA-1
Gene Sequence

>Msa0695140

ATGGCGCCGAGTATTCAACTAACTTCCACCGGCGCCGGCGATGACTCCGGCGATCTCGAAGATGTTCGCCTACTAGATTCCTACGATAAAAACGACGTCAACGACGACGGAACCAACCGGATTCAGGTCAGAATCACCGGCATGACCTGCGCCGCTTGCTCTAACTCCGTCGAAGCCGCTCTCATGTCCGTCGACGGTGTAATTCAAGCCTCCGTCGCTTTACTTCAAAACAAAGCCGACGTCGTTTTCAATAGAAACCTTGTCAAGGATGAAGATATTAAGAATGCAATTGAAGATGCAGGTTTTGAAGCTGAGATCTTACATGAACCTGTTTCAACCGGACCTAAACCGGTTGGAGATAGTACGGTGGTTGGACAGTTCACGATCGGCGGTATGACATGTGCGGCGTGTGTGAATTCCGTTGAAGGAATTTTAAACAACATCACCGGAGTAAAAAAAGCGGTGGTGGCTTTAGCTACTTCATTAGGTGAAGTTGAGTATGATCCAAACGTGATAAGCAAAGAAGATATTGTTATTGCAATTGAAGATGCAGGTTTTGAAGCTTCTTTTGTTCAGAGTACTAGTCAAGATGAGATTGTTTTAGGGGTTGTAGGTGTTTGTTCTTTGGTGGATGCAAGGGTTTTGGAAAGTATGCTTAGTGGTATGAAAGGGGTGAGGCAGTTTCGGTTTGATCCTTTGTTGAGTGAGCTTAATGTTGTTTTTGATCCTCAAGTTCTTAGTTCTAGATCGTTGGTTGATGAGATTCGCGTAGTTAGTAATGACAAATATACTTTGCATGTTAGAAGCCCTTATGCGAGAATGGCTTCTAAAGATGGTTCAGAGAGTTCGTCTATGTTTCGGCTTTTTATTACCAGCTTGCTTCTTAGTATTCCCCTCTTCTTCATGGGGGTAATTTGTCCTCATATCCCATTCATATACTCGTTATTACTTTGGAGATGTGGGCCTTTCCTCATGGATGATTGGTTGAAGTGGGCATTGGTGAGTGTCATTCAATTTGGGATTGGAAAGCGCTTCTACATAGCAGCTTTCAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTTGTTGCTTTGGGAACTACAGCTTCATATGTTTATTCTGTTTGTGCTCTTCTGTATGGCGCTCTTACTGGATTTTGGTCTACAACATACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGAAAGTATTTGGAATGTCTTGCCAAGGGGAAGACATCTGATGCCATTAAGAAGCTAGTAGAACTCACTCCTGCAACAGCTTTATTGGTTGTTAAAGACAAAGATGGCAGACCTGTGGAAGAAAGAGAAATAGATTCCTTGCTTATTCAACCTAGTGACACATTAAAAGTTCTGCCTGGTACAAAGATTCCCGCTGATGGTATTGTTACCTGGGGCTCAAGTTATGTAAATGAGAGTATGGTGACTGGCGAGTCTATACCTGTTTCGAAGGAGATCAATGCATCTGTCATTGGAGGTACCATCAATTTGCATGGTGTCCTTCACATTAAAGCTACCAAAGTAGGATCCGATACAGTCTTGAGTCAGATAATTAATTTGGTCGAGACGGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAGCAAGCATATTTGTTCCTACAATTGTAGCTCTGTCATTATTGACACTATTGTGTTGGTATACTGCTGGGGCTCTTGGAGCATACCCAGATGAATGGCTGCCGAAAAATGGAAACCACTTTGTTTTTGCCCTTATGTTTTCTATATCTGTTGTGGTGATTGCATGCCCATGTGCACTTGGTTTGGCGACACCAACTGCTGTCATGGTGGCAACAGGTGTTGGGGCTAACAATGGTGTGTTAATTAAAGGAGGAGAATCCTTAGAAAGAGCTCAGATGGTGAAGTACGTTATATTTGATAAGACAGGAACTCTAACTCAGGGTAAAGCCACTGTCTCTGTTGCCAAGGTGTTTGCAGGAATGGACCGTGGAGAATTTCTTAAACTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCGCTGGCAAAAGCGATATTACAATATGCACGCCATTTTCACTTCTTTGATGAGTCCTCTCTTACCAATGGATCCCAAAATGATGCCAATGAATTAAAATCAGGGTGGCTTTATGATGCCTCAGACTTCTCTGCTATTCCAGGAAGGGGTGTGCAGTGCATTATAGACGGACAGCGTGTTTTGGTTGGTAACAGGAAGCTGCTGGTGGAAAGTGGCATAAGTATTTCTACTGAAGTGGAAAACTTTGTTGTAGAGCTTGAAGAAAGTGCCAAGACTGGGATCCTTGTAGCGTGCAATGGAGTATTGATTGGAGTCTTAGGGGTTGCAGACTCACTTAAGCGAGAAGCTTCTGTTGTTATAGAGGGCCTCCAGAAAATGGGAATCACGCCTGTAATGGTTACAGGAGATAACTGGAGAACTGCTCGAGCTGTTGCCAAGGAGGTTGGCATTCAAGATGTTAGGGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTGGTTCGTTCATTCCAAAAAGATGGTAGTATAGTTGCAATGGTGGGTGACGGTATAAATGATTCTCCTGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGAGCTGGGACAGATATTGCAATAGAAGCTGCTAATTATGTGTTGATGAGAGATAATTTGGAAGATGTAATCACAGCTATTGATCTTTCTAAGAAGACATTTTCTCGTATTCGATTGAATTATGTATTTGCCATGGCCTACAATATTATTGCCGTACCAGTTGCTGCCGGGGTTTTATTTCCTTCACTGGGAATCAAGCTTCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCATCTGTTAGTGTTGTATGTTCTTCTTTGCTTCTTAGAAGATATAGAAAACCAAGACTTACTACAATACTTGAAATAATTGTAAATTAA
Protein sequence

>Msa0695140

MAPSIQLTSTGAGDDSGDLEDVRLLDSYDKNDVNDDGTNRIQVRITGMTCAACSNSVEAALMSVDGVIQASVALLQNKADVVFNRNLVKDEDIKNAIEDAGFEAEILHEPVSTGPKPVGDSTVVGQFTIGGMTCAACVNSVEGILNNITGVKKAVVALATSLGEVEYDPNVISKEDIVIAIEDAGFEASFVQSTSQDEIVLGVVGVCSLVDARVLESMLSGMKGVRQFRFDPLLSELNVVFDPQVLSSRSLVDEIRVVSNDKYTLHVRSPYARMASKDGSESSSMFRLFITSLLLSIPLFFMGVICPHIPFIYSLLLWRCGPFLMDDWLKWALVSVIQFGIGKRFYIAAFRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSTTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVVKDKDGRPVEEREIDSLLIQPSDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESIPVSKEINASVIGGTINLHGVLHIKATKVGSDTVLSQIINLVETAQMSKAPIQKFADYVASIFVPTIVALSLLTLLCWYTAGALGAYPDEWLPKNGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGESLERAQMVKYVIFDKTGTLTQGKATVSVAKVFAGMDRGEFLKLVASAEASSEHPLAKAILQYARHFHFFDESSLTNGSQNDANELKSGWLYDASDFSAIPGRGVQCIIDGQRVLVGNRKLLVESGISISTEVENFVVELEESAKTGILVACNGVLIGVLGVADSLKREASVVIEGLQKMGITPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAANYVLMRDNLEDVITAIDLSKKTFSRIRLNYVFAMAYNIIAVPVAAGVLFPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPRLTTILEIIVN*