Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735760 | XP_003624694.1 | 52.881 | 486 | 145 | 10 | 9 | 429 | 11 | 477 | 3.34e-134 | 405 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735760 | Q2HVB6 | 52.881 | 486 | 145 | 10 | 9 | 429 | 11 | 477 | 1.59e-134 | 405 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0735760 | Msa0743720 | 0.810091 | 1.369335e-50 | -8.615850e-47 |
| Msa0735760 | Msa0863870 | 0.803846 | 2.869116e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735760 | MtrunA17_Chr7g0253981 | 52.881 | 486 | 145 | 10 | 9 | 429 | 11 | 477 | 3.07e-138 | 405 |
| Msa0735760 | MtrunA17_Chr5g0401031 | 32.622 | 328 | 159 | 9 | 61 | 387 | 64 | 330 | 1.47e-31 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735760 | AT1G28760.1 | 43.571 | 280 | 100 | 7 | 35 | 271 | 32 | 296 | 3.64e-66 | 219 |
| Msa0735760 | AT1G28760.1 | 46.835 | 158 | 60 | 2 | 270 | 406 | 179 | 333 | 2.11e-34 | 134 |
| Msa0735760 | AT5G67610.1 | 30.565 | 301 | 160 | 11 | 14 | 271 | 16 | 310 | 2.98e-29 | 119 |
| Msa0735760 | AT5G67610.1 | 31.818 | 154 | 81 | 4 | 267 | 397 | 192 | 344 | 3.13e-12 | 68.6 |
| Msa0735760 | AT5G67610.2 | 30.990 | 313 | 155 | 12 | 14 | 271 | 16 | 322 | 4.49e-29 | 119 |
| Msa0735760 | AT5G67610.2 | 31.818 | 154 | 81 | 4 | 267 | 397 | 204 | 356 | 3.04e-12 | 68.6 |
| Msa0735760 | AT3G49840.1 | 31.373 | 306 | 154 | 12 | 11 | 271 | 21 | 315 | 2.96e-26 | 110 |
| Msa0735760 | AT3G49840.2 | 31.596 | 307 | 153 | 13 | 11 | 271 | 21 | 316 | 4.02e-26 | 110 |
Find 104 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGAGCGCTTTCAAGTTTC+TGG | 0.142536 | 5_1:+51444056 | Msa0735760:CDS |
| AATTCAATTCTTCAGAGTTT+TGG | 0.223809 | 5_1:+51446108 | Msa0735760:CDS |
| GGAACCCAACTGCTAATAAT+TGG | 0.267514 | 5_1:-51444608 | None:intergenic |
| GTATCTCCTTCCTTACTATT+AGG | 0.278382 | 5_1:+51444017 | Msa0735760:CDS |
| GGTTGCTCTTTCTGTACTAC+TGG | 0.292104 | 5_1:+51445616 | Msa0735760:intron |
| AATGGAGGGGTCTTCATAAA+TGG | 0.304549 | 5_1:+51444315 | Msa0735760:CDS |
| ATTGAACTACCATAATAAAA+TGG | 0.322030 | 5_1:-51444629 | None:intergenic |
| TTCAGCTAAAGCTTGCTCTA+TGG | 0.332869 | 5_1:-51447493 | None:intergenic |
| ACCTCTTGCAATTGGAGCTT+TGG | 0.333504 | 5_1:+51446980 | Msa0735760:CDS |
| CGCCTTATTAGTCTTGCAAT+TGG | 0.336185 | 5_1:+51444563 | Msa0735760:CDS |
| CGCGTTACTGGAGCTGCTTT+AGG | 0.338677 | 5_1:+51445752 | Msa0735760:CDS |
| CTGGAGGTGCTTTAGGCTAC+TGG | 0.352277 | 5_1:+51445651 | Msa0735760:CDS |
| GGTTGGTCAGTTTGTGAAAT+GGG | 0.354955 | 5_1:+51445724 | Msa0735760:CDS |
| TGTACTACTGGGTATCATCT+TGG | 0.358173 | 5_1:+51445628 | Msa0735760:CDS |
| AAATGGGGAATGCGCGTTAC+TGG | 0.360122 | 5_1:+51445740 | Msa0735760:CDS |
| TCTTCGATAAAATTGCTTCA+TGG | 0.364076 | 5_1:+51447032 | Msa0735760:CDS |
| AAATGGGCAATGTGCATTAC+TGG | 0.365398 | 5_1:+51446623 | Msa0735760:CDS |
| TGTACTACTTGGTATCATCT+TGG | 0.366574 | 5_1:+51446511 | Msa0735760:CDS |
| CAAAGTAACATGTAATGAAT+TGG | 0.368836 | 5_1:-51444108 | None:intergenic |
| GACGAGGTTGAGAGAGAAAT+GGG | 0.380849 | 5_1:-51443681 | None:intergenic |
| GAAGGAGATACATCTAAAAC+TGG | 0.381640 | 5_1:-51444005 | None:intergenic |
| GGCTCCAATTATTAGCAGTT+GGG | 0.386329 | 5_1:+51444604 | Msa0735760:CDS |
| ATCCAATTGCAAGACTAATA+AGG | 0.387359 | 5_1:-51444565 | None:intergenic |
| TGACGAGGTTGAGAGAGAAA+TGG | 0.389871 | 5_1:-51443682 | None:intergenic |
| CAATTCATTACATGTTACTT+TGG | 0.395185 | 5_1:+51444109 | Msa0735760:CDS |
| ATTGATACACCTCTTGCAAT+TGG | 0.395313 | 5_1:+51446972 | Msa0735760:CDS |
| TATGGTAGTTCAATGGCTAT+AGG | 0.395624 | 5_1:+51444638 | Msa0735760:CDS |
| AATTTACGATCATAGAGAAT+TGG | 0.399637 | 5_1:-51446089 | None:intergenic |
| ATCTTGGCTGGAGGTGCTTT+AGG | 0.404381 | 5_1:+51445644 | Msa0735760:CDS |
| GGGTTGCTCAGTTTGTGAAA+TGG | 0.409305 | 5_1:+51446606 | Msa0735760:CDS |
| GGGTTGGTCAGTTTGTGAAA+TGG | 0.411654 | 5_1:+51445723 | Msa0735760:CDS |
| GGTTGCTCAGTTTGTGAAAT+GGG | 0.425437 | 5_1:+51446607 | Msa0735760:CDS |
| GTTGCTCTTTCTGTACTACT+TGG | 0.428228 | 5_1:+51446500 | Msa0735760:CDS |
| TTGTTACCTTTGAGAGTAAC+GGG | 0.433137 | 5_1:-51443755 | None:intergenic |
| CAAGATTGACGGTGAAATAC+CGG | 0.436076 | 5_1:+51444385 | Msa0735760:CDS |
| TGGCTCCAATTATTAGCAGT+TGG | 0.447665 | 5_1:+51444603 | Msa0735760:CDS |
| CTGGAGCTGCTATAGGCTAC+TGG | 0.452288 | 5_1:+51446534 | Msa0735760:CDS |
| ATTGGAGCTTTGGTCTCTTG+TGG | 0.453059 | 5_1:+51446990 | Msa0735760:CDS |
| AAGATGGCAGTGTGGATGCC+GGG | 0.459320 | 5_1:+51445702 | Msa0735760:CDS |
| AAGATGGCAGTGTGGATGCC+GGG | 0.459320 | 5_1:+51446585 | Msa0735760:CDS |
| AAGCGCGCGGGTGAATTTGA+TGG | 0.460335 | 5_1:+51443643 | None:intergenic |
| GGGGTCTTCATAAATGGATC+TGG | 0.463704 | 5_1:+51444321 | Msa0735760:CDS |
| AATTTACGATCATAGAGTAT+TGG | 0.466939 | 5_1:-51444971 | None:intergenic |
| TCATAGAGAATTGGTGCAAA+AGG | 0.472297 | 5_1:-51446080 | None:intergenic |
| CTATAGGCTACTGGAATGTC+AGG | 0.482183 | 5_1:+51446543 | Msa0735760:CDS |
| TTTGTTATTTCAAAAGAAGA+TGG | 0.483979 | 5_1:+51445686 | Msa0735760:CDS |
| TTTGTTATTTCAAAAGAAGA+TGG | 0.483979 | 5_1:+51446569 | Msa0735760:CDS |
| ATCTTGGCTGGAGCTGCTAT+AGG | 0.484098 | 5_1:+51446527 | Msa0735760:CDS |
| AGCGCGCGGGTGAATTTGAT+GGG | 0.485644 | 5_1:+51443644 | None:intergenic |
| TCATAGAGTATTGGTGCAAA+AGG | 0.486384 | 5_1:-51444962 | None:intergenic |
| CTTTAGGCTACTGGAATGTC+AGG | 0.490655 | 5_1:+51445660 | Msa0735760:CDS |
| CTACTTGGTATCATCTTGGC+TGG | 0.491465 | 5_1:+51446515 | Msa0735760:CDS |
| ATTAGATTGACCTAATAGTA+AGG | 0.496105 | 5_1:-51444027 | None:intergenic |
| GGCAGTGTGGATGCCGGGGT+TGG | 0.496129 | 5_1:+51445707 | Msa0735760:CDS |
| GGGAGGGAATTGTTCATTGT+CGG | 0.503603 | 5_1:-51443735 | None:intergenic |
| AGAGCAAGCTTTAGCTGAAA+GGG | 0.510976 | 5_1:+51447497 | Msa0735760:CDS |
| CTACTGGGTATCATCTTGGC+TGG | 0.511645 | 5_1:+51445632 | Msa0735760:CDS |
| GAAGATGGCAGTGTGGATGC+CGG | 0.514872 | 5_1:+51445701 | Msa0735760:CDS |
| GAAGATGGCAGTGTGGATGC+CGG | 0.514872 | 5_1:+51446584 | Msa0735760:CDS |
| TCAACATATCTAGTTTCATA+AGG | 0.515189 | 5_1:-51444359 | None:intergenic |
| AAAGGTTCATTAAGGAAGAG+TGG | 0.522053 | 5_1:+51447451 | Msa0735760:intron |
| CGATAAAATTGCTTCATGGA+TGG | 0.523892 | 5_1:+51447036 | Msa0735760:CDS |
| TTCCCTCCCGTTACTCTCAA+AGG | 0.527324 | 5_1:+51443749 | Msa0735760:CDS |
| TTGGTGCAAAAGGAGTAATT+CGG | 0.531748 | 5_1:-51446070 | None:intergenic |
| TGGATTGACGCTGATGCTGT+TGG | 0.532027 | 5_1:+51444583 | Msa0735760:CDS |
| TAGAGCAAGCTTTAGCTGAA+AGG | 0.538223 | 5_1:+51447496 | Msa0735760:CDS |
| TTGGTGCAAAAGGAGTAATT+CGG | 0.538568 | 5_1:-51444952 | None:intergenic |
| GTTGTTACCTTTGAGAGTAA+CGG | 0.540251 | 5_1:-51443756 | None:intergenic |
| AATGGGCAATGTGCATTACT+GGG | 0.543773 | 5_1:+51446624 | Msa0735760:CDS |
| AAGGTTCATTAAGGAAGAGT+GGG | 0.543890 | 5_1:+51447452 | Msa0735760:intron |
| TATGTTGATGTCAAGATTGA+CGG | 0.548855 | 5_1:+51444374 | Msa0735760:CDS |
| TTGTGCAGGAATAATACTCT+TGG | 0.549682 | 5_1:+51444269 | Msa0735760:intron |
| GTTGCTCTTTCTGTACTACT+GGG | 0.551932 | 5_1:+51445617 | Msa0735760:CDS |
| GATTGACCTAATAGTAAGGA+AGG | 0.577185 | 5_1:-51444023 | None:intergenic |
| AAGATTGACGGTGAAATACC+GGG | 0.590615 | 5_1:+51444386 | Msa0735760:CDS |
| TTTCACAAACTGACCAACCC+CGG | 0.591110 | 5_1:-51445720 | None:intergenic |
| GTTGGTCAGTTTGTGAAATG+GGG | 0.592965 | 5_1:+51445725 | Msa0735760:CDS |
| AGTGTGAAAATAACGAATGG+AGG | 0.600105 | 5_1:+51444300 | Msa0735760:CDS |
| GTGTGAAAATAACGAATGGA+GGG | 0.600359 | 5_1:+51444301 | Msa0735760:CDS |
| AAGAGTGGGATGGCTTCATG+AGG | 0.600832 | 5_1:+51447466 | Msa0735760:CDS |
| CTGGGTATCATCTTGGCTGG+AGG | 0.602399 | 5_1:+51445635 | Msa0735760:CDS |
| TTTCACAAACTGAGCAACCC+CGG | 0.604583 | 5_1:-51446603 | None:intergenic |
| TACCTTTGAGAGTAACGGGA+GGG | 0.606197 | 5_1:-51443751 | None:intergenic |
| GGTATCTCAAGATTCAAGCT+CGG | 0.614150 | 5_1:+51444077 | Msa0735760:CDS |
| TTCATTAAGGAAGAGTGGGA+TGG | 0.617053 | 5_1:+51447456 | Msa0735760:CDS |
| ACCAAAGCTCCAATTGCAAG+AGG | 0.617168 | 5_1:-51446981 | None:intergenic |
| GTAGATTGTAAGAAGCGCGC+GGG | 0.633998 | 5_1:+51443631 | None:intergenic |
| GTTACAGTTGCACTTGACGA+AGG | 0.643317 | 5_1:+51444413 | Msa0735760:CDS |
| TGTGAAAATAACGAATGGAG+GGG | 0.647246 | 5_1:+51444302 | Msa0735760:CDS |
| AATGAACACCTGCAAAACAA+AGG | 0.647279 | 5_1:-51446651 | None:intergenic |
| GTCAGTGTGAAAATAACGAA+TGG | 0.648823 | 5_1:+51444297 | Msa0735760:CDS |
| TCATAAATGGATCTGGAGTG+CGG | 0.653486 | 5_1:+51444328 | Msa0735760:CDS |
| AGTGCAACTGTAACTGAACC+CGG | 0.655692 | 5_1:-51444404 | None:intergenic |
| GCGCGCGGGTGAATTTGATG+GGG | 0.660087 | 5_1:+51443645 | Msa0735760:exon |
| AGAGTGGGATGGCTTCATGA+GGG | 0.668572 | 5_1:+51447467 | Msa0735760:CDS |
| TTCAAAAGAAGATGGCAGTG+TGG | 0.670624 | 5_1:+51445694 | Msa0735760:CDS |
| TTCAAAAGAAGATGGCAGTG+TGG | 0.670624 | 5_1:+51446577 | Msa0735760:CDS |
| AGTAGATTGTAAGAAGCGCG+CGG | 0.676795 | 5_1:+51443630 | None:intergenic |
| AGATGGCAGTGTGGATGCCG+GGG | 0.677423 | 5_1:+51445703 | Msa0735760:CDS |
| AGATGGCAGTGTGGATGCCG+GGG | 0.677423 | 5_1:+51446586 | Msa0735760:CDS |
| GCAGGAATAATACTCTTGGA+TGG | 0.680449 | 5_1:+51444273 | Msa0735760:intron |
| ATGGGCAATGTGCATTACTG+GGG | 0.727143 | 5_1:+51446625 | Msa0735760:CDS |
| TTACCTTTGAGAGTAACGGG+AGG | 0.749855 | 5_1:-51443752 | None:intergenic |
| AGAGTGTCAAGAAAATGACG+AGG | 0.784833 | 5_1:-51443697 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTCATCTTTAAATTA+CGG | + | chr5_1:51445111-51445130 | Msa0735760:intron | 10.0% |
| !!! | GTATATAATAATTTAATTTG+TGG | + | chr5_1:51445416-51445435 | Msa0735760:intron | 10.0% |
| !!! | GTATATAATAATTTAATTTG+TGG | + | chr5_1:51445416-51445435 | Msa0735760:intron | 10.0% |
| !! | AATAAATAAAGAAAATGATT+TGG | - | chr5_1:51446891-51446910 | None:intergenic | 10.0% |
| !! | GATGATTAATATAATTTAAA+TGG | + | chr5_1:51447142-51447161 | Msa0735760:intron | 10.0% |
| !!! | TATAATTTAAATGGTTTTAA+TGG | + | chr5_1:51447151-51447170 | Msa0735760:intron | 10.0% |
| !! | TATATTATATAAAAATGGAA+AGG | - | chr5_1:51447325-51447344 | None:intergenic | 10.0% |
| !!! | ATTTTGTTATGTAATCTTTT+TGG | - | chr5_1:51444152-51444171 | None:intergenic | 15.0% |
| !!! | TTTCTAAAATAAATTAAGTG+TGG | - | chr5_1:51445208-51445227 | None:intergenic | 15.0% |
| !! | AAATTATTATATACTGAAAG+AGG | - | chr5_1:51445410-51445429 | None:intergenic | 15.0% |
| !! | TGTCTATTACAATTATAATA+CGG | + | chr5_1:51446185-51446204 | Msa0735760:intron | 15.0% |
| !! | AAATTATTATATACTGAAAG+AGG | - | chr5_1:51445410-51445429 | None:intergenic | 15.0% |
| !!! | GCAATTTTTTTTTTTTTTGA+AGG | - | chr5_1:51447178-51447197 | None:intergenic | 15.0% |
| !! | AAAAAAAAAATTGCAACTTA+TGG | + | chr5_1:51447184-51447203 | Msa0735760:intron | 15.0% |
| !! | AAAATTCGAAAATTGAAAAG+GGG | - | chr5_1:51443825-51443844 | None:intergenic | 20.0% |
| !! | GAAAATTCGAAAATTGAAAA+GGG | - | chr5_1:51443826-51443845 | None:intergenic | 20.0% |
| !! | AGAAAATTCGAAAATTGAAA+AGG | - | chr5_1:51443827-51443846 | None:intergenic | 20.0% |
| !! | ATTGAACTACCATAATAAAA+TGG | - | chr5_1:51444632-51444651 | None:intergenic | 20.0% |
| !!! | ATTTTATTATGGTAGTTCAA+TGG | + | chr5_1:51444631-51444650 | Msa0735760:CDS | 20.0% |
| !!! | AGTTATAATCATTCTTTTTC+AGG | + | chr5_1:51444673-51444692 | Msa0735760:CDS | 20.0% |
| !! | GAAATATGTGTATAATACAA+AGG | - | chr5_1:51444722-51444741 | None:intergenic | 20.0% |
| !!! | TACCTTTCTATTTATCTTTT+AGG | + | chr5_1:51445045-51445064 | Msa0735760:intron | 20.0% |
| !!! | ACCTTTCTATTTATCTTTTA+GGG | + | chr5_1:51445046-51445065 | Msa0735760:intron | 20.0% |
| !! | TTATAATTGTAAGACACTAA+GGG | - | chr5_1:51445311-51445330 | None:intergenic | 20.0% |
| !! | ATTATAATTGTAAGACACTA+AGG | - | chr5_1:51445312-51445331 | None:intergenic | 20.0% |
| !! | AGTGTCTTACAATTATAATA+CGG | + | chr5_1:51445313-51445332 | Msa0735760:intron | 20.0% |
| !! | GTCTTTCATCATTTATAATT+TGG | + | chr5_1:51445540-51445559 | Msa0735760:intron | 20.0% |
| !!! | TTTGTTATTTCAAAAGAAGA+TGG | + | chr5_1:51445686-51445705 | Msa0735760:CDS | 20.0% |
| !!! | AGTTATAATCATTCTTTTTC+AGG | + | chr5_1:51444673-51444692 | Msa0735760:CDS | 20.0% |
| !! | GAAATATGTGTATAATACAA+AGG | - | chr5_1:51444722-51444741 | None:intergenic | 20.0% |
| !! | ACACTAAAACATAAATAGAA+AGG | - | chr5_1:51446168-51446187 | None:intergenic | 20.0% |
| !! | GTCTTTCATCATTTATAATT+TGG | + | chr5_1:51445540-51445559 | Msa0735760:intron | 20.0% |
| !!! | TTTGTTATTTCAAAAGAAGA+TGG | + | chr5_1:51445686-51445705 | Msa0735760:CDS | 20.0% |
| !! | AAAAAAGTCAGAATAAATAG+GGG | - | chr5_1:51446933-51446952 | None:intergenic | 20.0% |
| !! | CAAAAAAGTCAGAATAAATA+GGG | - | chr5_1:51446934-51446953 | None:intergenic | 20.0% |
| !! | ACAAAAAAGTCAGAATAAAT+AGG | - | chr5_1:51446935-51446954 | None:intergenic | 20.0% |
| !! | CATTGTTGAATAATAAACAA+AGG | - | chr5_1:51447388-51447407 | None:intergenic | 20.0% |
| !!! | CTTTGTTTATTATTCAACAA+TGG | + | chr5_1:51447386-51447405 | Msa0735760:intron | 20.0% |
| !! | TTCTCTTATTCAATTTTCCT+AGG | + | chr5_1:51443792-51443811 | Msa0735760:intron | 25.0% |
| !! | TCTCTTATTCAATTTTCCTA+GGG | + | chr5_1:51443793-51443812 | Msa0735760:intron | 25.0% |
| ! | ATTAGATTGACCTAATAGTA+AGG | - | chr5_1:51444030-51444049 | None:intergenic | 25.0% |
| ! | CAAAGTAACATGTAATGAAT+TGG | - | chr5_1:51444111-51444130 | None:intergenic | 25.0% |
| !! | CAATTCATTACATGTTACTT+TGG | + | chr5_1:51444109-51444128 | Msa0735760:CDS | 25.0% |
| !!! | AAATCAAGCTTTGTTTTCAT+AGG | + | chr5_1:51444168-51444187 | Msa0735760:CDS | 25.0% |
| ! | CTTATTTATAATGTTTGTGC+AGG | + | chr5_1:51444255-51444274 | Msa0735760:intron | 25.0% |
| !! | TCAACATATCTAGTTTCATA+AGG | - | chr5_1:51444362-51444381 | None:intergenic | 25.0% |
| !!! | CTGTTATTTTCTTGAACTTT+CGG | + | chr5_1:51444494-51444513 | Msa0735760:intron | 25.0% |
| ! | AATTTACGATCATAGAGTAT+TGG | - | chr5_1:51444974-51444993 | None:intergenic | 25.0% |
| !! | AATTCAATTCTTCAGAGTTT+TGG | + | chr5_1:51444990-51445009 | Msa0735760:intron | 25.0% |
| !! | ATTCAATTCTTCAGAGTTTT+GGG | + | chr5_1:51444991-51445010 | Msa0735760:intron | 25.0% |
| ! | AATTTACGATCATAGAGAAT+TGG | - | chr5_1:51446092-51446111 | None:intergenic | 25.0% |
| !! | AATTCAATTCTTCAGAGTTT+TGG | + | chr5_1:51444990-51445009 | Msa0735760:intron | 25.0% |
| !! | ATTCAATTCTTCAGAGTTTT+GGG | + | chr5_1:51444991-51445010 | Msa0735760:intron | 25.0% |
| !!! | TTATAATTTGGCTTGTTTAC+CGG | + | chr5_1:51446435-51446454 | Msa0735760:intron | 25.0% |
| ! | TAGTTACAATTGGCAATATA+TGG | - | chr5_1:51446815-51446834 | None:intergenic | 25.0% |
| !! | TGAAGTATTAATAAAGCTTC+AGG | - | chr5_1:51447076-51447095 | None:intergenic | 25.0% |
| ! | TTAATCATCTATTACTTCCT+TGG | - | chr5_1:51447131-51447150 | None:intergenic | 25.0% |
| !!! | AAAGCACTGAATCTTATTAT+AGG | + | chr5_1:51447254-51447273 | Msa0735760:intron | 25.0% |
| ! | CTGAATCTTATTATAGGAAA+TGG | + | chr5_1:51447260-51447279 | Msa0735760:intron | 25.0% |
| ! | AATGGAAAAAAGGTTCATTA+AGG | + | chr5_1:51447443-51447462 | Msa0735760:intron | 25.0% |
| ATAAGAGAATCAGAAGAAGA+GGG | - | chr5_1:51443781-51443800 | None:intergenic | 30.0% | |
| AATAAGAGAATCAGAAGAAG+AGG | - | chr5_1:51443782-51443801 | None:intergenic | 30.0% | |
| TGTAATCTATACATCGCATA+TGG | + | chr5_1:51443856-51443875 | Msa0735760:intron | 30.0% | |
| ATTAAGCATACAGCTACAAA+AGG | - | chr5_1:51443909-51443928 | None:intergenic | 30.0% | |
| TGACAAAATTCACTAGAAGT+CGG | - | chr5_1:51444222-51444241 | None:intergenic | 30.0% | |
| TATGTTGATGTCAAGATTGA+CGG | + | chr5_1:51444374-51444393 | Msa0735760:CDS | 30.0% | |
| ATCCAATTGCAAGACTAATA+AGG | - | chr5_1:51444568-51444587 | None:intergenic | 30.0% | |
| ! | AGTTGGGTTCCATTTTATTA+TGG | + | chr5_1:51444620-51444639 | Msa0735760:CDS | 30.0% |
| GCATAACAGTCAGAAAAAAT+TGG | - | chr5_1:51444763-51444782 | None:intergenic | 30.0% | |
| !!! | ATTTTTTCTGACTGTTATGC+TGG | + | chr5_1:51444763-51444782 | Msa0735760:intron | 30.0% |
| !!! | TTTTTTCTGACTGTTATGCT+GGG | + | chr5_1:51444764-51444783 | Msa0735760:intron | 30.0% |
| !!! | AAGACATTTTTTCTTCCAGT+TGG | - | chr5_1:51444803-51444822 | None:intergenic | 30.0% |
| ! | GTCTTTTATCTTACCATGTA+TGG | + | chr5_1:51444818-51444837 | Msa0735760:intron | 30.0% |
| TATTGTGATATGTTTCAGCT+TGG | + | chr5_1:51444927-51444946 | Msa0735760:intron | 30.0% | |
| GCCCTAAAAGATAAATAGAA+AGG | - | chr5_1:51445050-51445069 | None:intergenic | 30.0% | |
| ! | TTATAATACGGTTTTCGCTT+TGG | + | chr5_1:51445325-51445344 | Msa0735760:intron | 30.0% |
| ! | TATAATACGGTTTTCGCTTT+GGG | + | chr5_1:51445326-51445345 | Msa0735760:intron | 30.0% |
| !!! | AGAATGCATTTTTAGCAGAT+GGG | - | chr5_1:51445515-51445534 | None:intergenic | 30.0% |
| ! | ACTTTACCTCTATGATTTGT+AGG | + | chr5_1:51445595-51445614 | Msa0735760:intron | 30.0% |
| GCATAACAGTCAGAAAAAAT+TGG | - | chr5_1:51444763-51444782 | None:intergenic | 30.0% | |
| !!! | ATTTTTTCTGACTGTTATGC+AGG | + | chr5_1:51444763-51444782 | Msa0735760:intron | 30.0% |
| !!! | TTTTTTCTGACTGTTATGCA+GGG | + | chr5_1:51445882-51445901 | Msa0735760:intron | 30.0% |
| !!! | AAGACATTTTTTCTTCCAGT+TGG | - | chr5_1:51444803-51444822 | None:intergenic | 30.0% |
| ! | GTCTTTTATCTTACCATGTA+TGG | + | chr5_1:51444818-51444837 | Msa0735760:intron | 30.0% |
| ! | TTATAATACGGTTTTCGCTT+TGG | + | chr5_1:51445325-51445344 | Msa0735760:intron | 30.0% |
| ! | TATAATACGGTTTTCGCTTT+GGG | + | chr5_1:51445326-51445345 | Msa0735760:intron | 30.0% |
| !!! | TAGAATGCATTTTTAGCAGA+CGG | - | chr5_1:51446399-51446418 | None:intergenic | 30.0% |
| TTTCATGAAGAATTGATGTC+CGG | - | chr5_1:51445574-51445593 | None:intergenic | 30.0% | |
| ATTGCCAATTGTAACTATTC+TGG | + | chr5_1:51446818-51446837 | Msa0735760:intron | 30.0% | |
| ACTTCCAGAATAGTTACAAT+TGG | - | chr5_1:51446825-51446844 | None:intergenic | 30.0% | |
| TCTTCGATAAAATTGCTTCA+TGG | + | chr5_1:51447032-51447051 | Msa0735760:CDS | 30.0% | |
| TAATACTTCACTTTAAGCAG+TGG | + | chr5_1:51447086-51447105 | Msa0735760:intron | 30.0% | |
| TTTGCTTAGTTATTTGTCCA+AGG | + | chr5_1:51447111-51447130 | Msa0735760:intron | 30.0% | |
| ! | TTGTTACCTTTGAGAGTAAC+GGG | - | chr5_1:51443758-51443777 | None:intergenic | 35.0% |
| ! | GTTGTTACCTTTGAGAGTAA+CGG | - | chr5_1:51443759-51443778 | None:intergenic | 35.0% |
| TTGTAGCTGTATGCTTAATG+AGG | + | chr5_1:51443910-51443929 | Msa0735760:intron | 35.0% | |
| ! | GAAGGAGATACATCTAAAAC+TGG | - | chr5_1:51444008-51444027 | None:intergenic | 35.0% |
| GTATCTCCTTCCTTACTATT+AGG | + | chr5_1:51444017-51444036 | Msa0735760:CDS | 35.0% | |
| GATTGACCTAATAGTAAGGA+AGG | - | chr5_1:51444026-51444045 | None:intergenic | 35.0% | |
| !!! | CTTTTTGGAATCACGAAAGA+TGG | - | chr5_1:51444137-51444156 | None:intergenic | 35.0% |
| TTGTGCAGGAATAATACTCT+TGG | + | chr5_1:51444269-51444288 | Msa0735760:intron | 35.0% | |
| GTCAGTGTGAAAATAACGAA+TGG | + | chr5_1:51444297-51444316 | Msa0735760:CDS | 35.0% | |
| AGTGTGAAAATAACGAATGG+AGG | + | chr5_1:51444300-51444319 | Msa0735760:CDS | 35.0% | |
| GTGTGAAAATAACGAATGGA+GGG | + | chr5_1:51444301-51444320 | Msa0735760:CDS | 35.0% | |
| TGTGAAAATAACGAATGGAG+GGG | + | chr5_1:51444302-51444321 | Msa0735760:CDS | 35.0% | |
| TATGGTAGTTCAATGGCTAT+AGG | + | chr5_1:51444638-51444657 | Msa0735760:CDS | 35.0% | |
| TTGGTGCAAAAGGAGTAATT+CGG | - | chr5_1:51444955-51444974 | None:intergenic | 35.0% | |
| !! | TCATAGAGTATTGGTGCAAA+AGG | - | chr5_1:51444965-51444984 | None:intergenic | 35.0% |
| !!! | TTTATCTTTTAGGGCGTGTT+TGG | + | chr5_1:51445055-51445074 | Msa0735760:intron | 35.0% |
| AGTACACGAGTAGAATTGTA+GGG | - | chr5_1:51445448-51445467 | None:intergenic | 35.0% | |
| ! | TTTTAGCAGATGGGCAAATA+TGG | - | chr5_1:51445506-51445525 | None:intergenic | 35.0% |
| !!! | GAGAATGCATTTTTAGCAGA+TGG | - | chr5_1:51445516-51445535 | None:intergenic | 35.0% |
| TTGGTGCAAAAGGAGTAATT+CGG | - | chr5_1:51444955-51444974 | None:intergenic | 35.0% | |
| TCATAGAGAATTGGTGCAAA+AGG | - | chr5_1:51446083-51446102 | None:intergenic | 35.0% | |
| TCAGCAGAAAATAGATGCTA+AGG | + | chr5_1:51446252-51446271 | Msa0735760:intron | 35.0% | |
| AGTACACGAGTAGAATTGTA+GGG | - | chr5_1:51445448-51445467 | None:intergenic | 35.0% | |
| !!! | AGAATGCATTTTTAGCAGAC+GGG | - | chr5_1:51446398-51446417 | None:intergenic | 35.0% |
| TGTACTACTTGGTATCATCT+TGG | + | chr5_1:51446511-51446530 | Msa0735760:CDS | 35.0% | |
| AATGAACACCTGCAAAACAA+AGG | - | chr5_1:51446654-51446673 | None:intergenic | 35.0% | |
| ! | CATATGTGACAGGTATTGTT+AGG | + | chr5_1:51446704-51446723 | Msa0735760:intron | 35.0% |
| TTTGATGAAGTTGCACAGTA+TGG | + | chr5_1:51446864-51446883 | Msa0735760:intron | 35.0% | |
| ATTGATACACCTCTTGCAAT+TGG | + | chr5_1:51446972-51446991 | Msa0735760:CDS | 35.0% | |
| CGATAAAATTGCTTCATGGA+TGG | + | chr5_1:51447036-51447055 | Msa0735760:CDS | 35.0% | |
| CAAGATCAGCAATGGAAAAA+AGG | + | chr5_1:51447433-51447452 | Msa0735760:intron | 35.0% | |
| AAAGGTTCATTAAGGAAGAG+TGG | + | chr5_1:51447451-51447470 | Msa0735760:intron | 35.0% | |
| AAGGTTCATTAAGGAAGAGT+GGG | + | chr5_1:51447452-51447471 | Msa0735760:intron | 35.0% | |
| ! | AGAGTGTCAAGAAAATGACG+AGG | - | chr5_1:51443700-51443719 | None:intergenic | 40.0% |
| GAACGTAGATTGCAAGAACA+AGG | - | chr5_1:51443955-51443974 | None:intergenic | 40.0% | |
| TCTACGTTCATTACAACTGC+AGG | + | chr5_1:51443966-51443985 | Msa0735760:intron | 40.0% | |
| GGTATCTCAAGATTCAAGCT+CGG | + | chr5_1:51444077-51444096 | Msa0735760:CDS | 40.0% | |
| GCAGGAATAATACTCTTGGA+TGG | + | chr5_1:51444273-51444292 | Msa0735760:intron | 40.0% | |
| AATGGAGGGGTCTTCATAAA+TGG | + | chr5_1:51444315-51444334 | Msa0735760:CDS | 40.0% | |
| ! | TCATAAATGGATCTGGAGTG+CGG | + | chr5_1:51444328-51444347 | Msa0735760:CDS | 40.0% |
| CAAGATTGACGGTGAAATAC+CGG | + | chr5_1:51444385-51444404 | Msa0735760:CDS | 40.0% | |
| AAGATTGACGGTGAAATACC+GGG | + | chr5_1:51444386-51444405 | Msa0735760:CDS | 40.0% | |
| ! | AGGTTTGTTTCTTCCATGTC+AGG | + | chr5_1:51444433-51444452 | Msa0735760:intron | 40.0% |
| TGTTTCTTCCATGTCAGGAA+AGG | + | chr5_1:51444438-51444457 | Msa0735760:intron | 40.0% | |
| GTTTCTTCCATGTCAGGAAA+GGG | + | chr5_1:51444439-51444458 | Msa0735760:intron | 40.0% | |
| ! | TTCTTTTCCCTTTCCTGACA+TGG | - | chr5_1:51444449-51444468 | None:intergenic | 40.0% |
| !! | CGCCTTATTAGTCTTGCAAT+TGG | + | chr5_1:51444563-51444582 | Msa0735760:CDS | 40.0% |
| TGGCTCCAATTATTAGCAGT+TGG | + | chr5_1:51444603-51444622 | Msa0735760:CDS | 40.0% | |
| GGCTCCAATTATTAGCAGTT+GGG | + | chr5_1:51444604-51444623 | Msa0735760:CDS | 40.0% | |
| GGAACCCAACTGCTAATAAT+TGG | - | chr5_1:51444611-51444630 | None:intergenic | 40.0% | |
| GGCATGAAATTATTGCCAAC+TGG | + | chr5_1:51444785-51444804 | Msa0735760:intron | 40.0% | |
| !!! | TTTTAGGGCGTGTTTGGATT+GGG | + | chr5_1:51445061-51445080 | Msa0735760:intron | 40.0% |
| TGTGTTTGGATTGAGGGTTT+AGG | - | chr5_1:51445288-51445307 | None:intergenic | 40.0% | |
| ! | TAAGGGTGTGTTTGGATTGA+GGG | - | chr5_1:51445294-51445313 | None:intergenic | 40.0% |
| ! | TAAGACACTAAGGGTGTGTT+TGG | - | chr5_1:51445302-51445321 | None:intergenic | 40.0% |
| TCAGCAGAAAATAGCTGCTA+AGG | + | chr5_1:51445369-51445388 | Msa0735760:intron | 40.0% | |
| CAGTACACGAGTAGAATTGT+AGG | - | chr5_1:51445449-51445468 | None:intergenic | 40.0% | |
| GAGCAACCTACAAATCATAG+AGG | - | chr5_1:51445604-51445623 | None:intergenic | 40.0% | |
| GTTGCTCTTTCTGTACTACT+GGG | + | chr5_1:51445617-51445636 | Msa0735760:CDS | 40.0% | |
| TGTACTACTGGGTATCATCT+TGG | + | chr5_1:51445628-51445647 | Msa0735760:CDS | 40.0% | |
| TTCAAAAGAAGATGGCAGTG+TGG | + | chr5_1:51445694-51445713 | Msa0735760:CDS | 40.0% | |
| ! | GGTTGGTCAGTTTGTGAAAT+GGG | + | chr5_1:51445724-51445743 | Msa0735760:CDS | 40.0% |
| GTTGGTCAGTTTGTGAAATG+GGG | + | chr5_1:51445725-51445744 | Msa0735760:CDS | 40.0% | |
| GGCATGAAATTATTGCCAAC+TGG | + | chr5_1:51444785-51444804 | Msa0735760:intron | 40.0% | |
| ACTCATTGCTGATCCATACA+TGG | - | chr5_1:51445952-51445971 | None:intergenic | 40.0% | |
| GCAGAAAATAGATGCTAAGG+AGG | + | chr5_1:51446255-51446274 | Msa0735760:intron | 40.0% | |
| CAGTACACGAGTAGAATTGT+AGG | - | chr5_1:51445449-51445468 | None:intergenic | 40.0% | |
| ! | TTTTAGCAGACGGGCAAATA+TGG | - | chr5_1:51446389-51446408 | None:intergenic | 40.0% |
| ! | ACTTTACCTCTGTGATTTGC+AGG | + | chr5_1:51446478-51446497 | Msa0735760:intron | 40.0% |
| GTTGCTCTTTCTGTACTACT+TGG | + | chr5_1:51445617-51445636 | Msa0735760:CDS | 40.0% | |
| TTCAAAAGAAGATGGCAGTG+TGG | + | chr5_1:51445694-51445713 | Msa0735760:CDS | 40.0% | |
| GGTTGCTCAGTTTGTGAAAT+GGG | + | chr5_1:51446607-51446626 | Msa0735760:CDS | 40.0% | |
| AAATGGGCAATGTGCATTAC+TGG | + | chr5_1:51446623-51446642 | Msa0735760:CDS | 40.0% | |
| AATGGGCAATGTGCATTACT+GGG | + | chr5_1:51446624-51446643 | Msa0735760:CDS | 40.0% | |
| CAATACCTGTCACATATGAC+AGG | - | chr5_1:51446702-51446721 | None:intergenic | 40.0% | |
| ! | ACAGGTATTGTTAGGTCACT+TGG | + | chr5_1:51446712-51446731 | Msa0735760:intron | 40.0% |
| ! | ATTCTGGAAGTTGCATAGCT+TGG | + | chr5_1:51446834-51446853 | Msa0735760:intron | 40.0% |
| ACATTGCACAAGATCAGCAA+TGG | + | chr5_1:51447425-51447444 | Msa0735760:intron | 40.0% | |
| TTCATTAAGGAAGAGTGGGA+TGG | + | chr5_1:51447456-51447475 | Msa0735760:CDS | 40.0% | |
| ! | TTCAGCTAAAGCTTGCTCTA+TGG | - | chr5_1:51447496-51447515 | None:intergenic | 40.0% |
| ! | TAGAGCAAGCTTTAGCTGAA+AGG | + | chr5_1:51447496-51447515 | Msa0735760:CDS | 40.0% |
| ! | AGAGCAAGCTTTAGCTGAAA+GGG | + | chr5_1:51447497-51447516 | Msa0735760:CDS | 40.0% |
| GACGAGGTTGAGAGAGAAAT+GGG | - | chr5_1:51443684-51443703 | None:intergenic | 45.0% | |
| TGACGAGGTTGAGAGAGAAA+TGG | - | chr5_1:51443685-51443704 | None:intergenic | 45.0% | |
| GGGAGGGAATTGTTCATTGT+CGG | - | chr5_1:51443738-51443757 | None:intergenic | 45.0% | |
| ! | TACCTTTGAGAGTAACGGGA+GGG | - | chr5_1:51443754-51443773 | None:intergenic | 45.0% |
| ! | TTACCTTTGAGAGTAACGGG+AGG | - | chr5_1:51443755-51443774 | None:intergenic | 45.0% |
| TGAAAAGGGGAAGAAACCCT+AGG | - | chr5_1:51443812-51443831 | None:intergenic | 45.0% | |
| !! | TGTGAGCGCTTTCAAGTTTC+TGG | + | chr5_1:51444056-51444075 | Msa0735760:CDS | 45.0% |
| GGGGTCTTCATAAATGGATC+TGG | + | chr5_1:51444321-51444340 | Msa0735760:CDS | 45.0% | |
| AGTGCAACTGTAACTGAACC+CGG | - | chr5_1:51444407-51444426 | None:intergenic | 45.0% | |
| GTTACAGTTGCACTTGACGA+AGG | + | chr5_1:51444413-51444432 | Msa0735760:CDS | 45.0% | |
| GCAATTGCTGAAAGTCTGCA+GGG | - | chr5_1:51444544-51444563 | None:intergenic | 45.0% | |
| ACTCATCGCTGATCCATACA+TGG | - | chr5_1:51444834-51444853 | None:intergenic | 45.0% | |
| !!! | CTTTTAGGGCGTGTTTGGAT+TGG | + | chr5_1:51445060-51445079 | Msa0735760:intron | 45.0% |
| ! | GTTTGGATTGGGTTTAGGAG+TGG | + | chr5_1:51445072-51445091 | Msa0735760:intron | 45.0% |
| GATTGGGTTTAGGAGTGGAA+GGG | + | chr5_1:51445077-51445096 | Msa0735760:intron | 45.0% | |
| TTTGGATTGAGGGTTTAGGC+GGG | - | chr5_1:51445284-51445303 | None:intergenic | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+CGG | - | chr5_1:51445285-51445304 | None:intergenic | 45.0% | |
| ! | CTAAGGGTGTGTTTGGATTG+AGG | - | chr5_1:51445295-51445314 | None:intergenic | 45.0% |
| GCAGAAAATAGCTGCTAAGG+AGG | + | chr5_1:51445372-51445391 | Msa0735760:intron | 45.0% | |
| ATATGGCCAGCAATCATCAC+CGG | - | chr5_1:51445489-51445508 | None:intergenic | 45.0% | |
| GGTTGCTCTTTCTGTACTAC+TGG | + | chr5_1:51445616-51445635 | Msa0735760:intron | 45.0% | |
| CTTTAGGCTACTGGAATGTC+AGG | + | chr5_1:51445660-51445679 | Msa0735760:CDS | 45.0% | |
| TTTCACAAACTGACCAACCC+CGG | - | chr5_1:51445723-51445742 | None:intergenic | 45.0% | |
| !! | GGGTTGGTCAGTTTGTGAAA+TGG | + | chr5_1:51445723-51445742 | Msa0735760:CDS | 45.0% |
| CTACTTGGTATCATCTTGGC+TGG | + | chr5_1:51446515-51446534 | Msa0735760:CDS | 45.0% | |
| CTATAGGCTACTGGAATGTC+AGG | + | chr5_1:51446543-51446562 | Msa0735760:CDS | 45.0% | |
| TTTCACAAACTGAGCAACCC+CGG | - | chr5_1:51446606-51446625 | None:intergenic | 45.0% | |
| GGGTTGCTCAGTTTGTGAAA+TGG | + | chr5_1:51446606-51446625 | Msa0735760:CDS | 45.0% | |
| ATGGGCAATGTGCATTACTG+GGG | + | chr5_1:51446625-51446644 | Msa0735760:CDS | 45.0% | |
| CTAGTCCTGTCATATGTGAC+AGG | + | chr5_1:51446694-51446713 | Msa0735760:intron | 45.0% | |
| ACCTCTTGCAATTGGAGCTT+TGG | + | chr5_1:51446980-51446999 | Msa0735760:CDS | 45.0% | |
| ACCAAAGCTCCAATTGCAAG+AGG | - | chr5_1:51446984-51447003 | None:intergenic | 45.0% | |
| ! | ATTGGAGCTTTGGTCTCTTG+TGG | + | chr5_1:51446990-51447009 | Msa0735760:CDS | 45.0% |
| !! | GTAAATATATTATATAAAAA+TGG | - | chr5_1:51447330-51447349 | None:intergenic | 5.0% |
| TTCCCTCCCGTTACTCTCAA+AGG | + | chr5_1:51443749-51443768 | Msa0735760:CDS | 50.0% | |
| CGCAATTGCTGAAAGTCTGC+AGG | - | chr5_1:51444545-51444564 | None:intergenic | 50.0% | |
| TGGATTGACGCTGATGCTGT+TGG | + | chr5_1:51444583-51444602 | Msa0735760:CDS | 50.0% | |
| ! | GGCGTGTTTGGATTGGGTTT+AGG | + | chr5_1:51445067-51445086 | Msa0735760:intron | 50.0% |
| GGATTGGGTTTAGGAGTGGA+AGG | + | chr5_1:51445076-51445095 | Msa0735760:intron | 50.0% | |
| TTGGATTGAGGGTTTAGGCG+GGG | - | chr5_1:51445283-51445302 | None:intergenic | 50.0% | |
| TGCTACCCTGATGTTTGCTC+CGG | + | chr5_1:51445467-51445486 | Msa0735760:intron | 50.0% | |
| CATCACCGGAGCAAACATCA+GGG | - | chr5_1:51445475-51445494 | None:intergenic | 50.0% | |
| TCATCACCGGAGCAAACATC+AGG | - | chr5_1:51445476-51445495 | None:intergenic | 50.0% | |
| TTTGCTCCGGTGATGATTGC+TGG | + | chr5_1:51445480-51445499 | Msa0735760:intron | 50.0% | |
| CTACTGGGTATCATCTTGGC+TGG | + | chr5_1:51445632-51445651 | Msa0735760:CDS | 50.0% | |
| !! | ATCTTGGCTGGAGGTGCTTT+AGG | + | chr5_1:51445644-51445663 | Msa0735760:CDS | 50.0% |
| AAATGGGGAATGCGCGTTAC+TGG | + | chr5_1:51445740-51445759 | Msa0735760:CDS | 50.0% | |
| CGTCACAGGAGCAAACATCA+GGG | - | chr5_1:51446358-51446377 | None:intergenic | 50.0% | |
| TCGTCACAGGAGCAAACATC+AGG | - | chr5_1:51446359-51446378 | None:intergenic | 50.0% | |
| TTTGCTCCTGTGACGATTGC+TGG | + | chr5_1:51446363-51446382 | Msa0735760:intron | 50.0% | |
| ATATGGCCAGCAATCGTCAC+AGG | - | chr5_1:51446372-51446391 | None:intergenic | 50.0% | |
| GAGCAACCTGCAAATCACAG+AGG | - | chr5_1:51446487-51446506 | None:intergenic | 50.0% | |
| ATCTTGGCTGGAGCTGCTAT+AGG | + | chr5_1:51446527-51446546 | Msa0735760:CDS | 50.0% | |
| !!! | TGGGGCTACCTTTGTTTTGC+AGG | + | chr5_1:51446643-51446662 | Msa0735760:CDS | 50.0% |
| AAGAGTGGGATGGCTTCATG+AGG | + | chr5_1:51447466-51447485 | Msa0735760:CDS | 50.0% | |
| AGAGTGGGATGGCTTCATGA+GGG | + | chr5_1:51447467-51447486 | Msa0735760:CDS | 50.0% | |
| TGGGTTTAGGAGTGGAAGGG+AGG | + | chr5_1:51445080-51445099 | Msa0735760:intron | 55.0% | |
| GGGTTTAGGAGTGGAAGGGA+GGG | + | chr5_1:51445081-51445100 | Msa0735760:intron | 55.0% | |
| GGTTTAGGAGTGGAAGGGAG+GGG | + | chr5_1:51445082-51445101 | Msa0735760:intron | 55.0% | |
| TTGAGGGTTTAGGCGGGGAA+GGG | - | chr5_1:51445278-51445297 | None:intergenic | 55.0% | |
| ATTGAGGGTTTAGGCGGGGA+AGG | - | chr5_1:51445279-51445298 | None:intergenic | 55.0% | |
| CTGGGTATCATCTTGGCTGG+AGG | + | chr5_1:51445635-51445654 | Msa0735760:CDS | 55.0% | |
| !! | CTGGAGGTGCTTTAGGCTAC+TGG | + | chr5_1:51445651-51445670 | Msa0735760:CDS | 55.0% |
| GAAGATGGCAGTGTGGATGC+CGG | + | chr5_1:51445701-51445720 | Msa0735760:CDS | 55.0% | |
| AAGATGGCAGTGTGGATGCC+GGG | + | chr5_1:51445702-51445721 | Msa0735760:CDS | 55.0% | |
| ! | CGCGTTACTGGAGCTGCTTT+AGG | + | chr5_1:51445752-51445771 | Msa0735760:CDS | 55.0% |
| CTGGAGCTGCTATAGGCTAC+TGG | + | chr5_1:51446534-51446553 | Msa0735760:CDS | 55.0% | |
| GAAGATGGCAGTGTGGATGC+CGG | + | chr5_1:51445701-51445720 | Msa0735760:CDS | 55.0% | |
| AAGATGGCAGTGTGGATGCC+GGG | + | chr5_1:51445702-51445721 | Msa0735760:CDS | 55.0% | |
| GCGCGCGGGTGAATTTGATG+GGG | + | chr5_1:51443645-51443664 | Msa0735760:exon | 60.0% | |
| TTAGGAGTGGAAGGGAGGGG+AGG | + | chr5_1:51445085-51445104 | Msa0735760:intron | 60.0% | |
| TAGGAGTGGAAGGGAGGGGA+GGG | + | chr5_1:51445086-51445105 | Msa0735760:intron | 60.0% | |
| GGTTTAGGCGGGGAAGGGAA+GGG | - | chr5_1:51445273-51445292 | None:intergenic | 60.0% | |
| AGATGGCAGTGTGGATGCCG+GGG | + | chr5_1:51445703-51445722 | Msa0735760:CDS | 60.0% | |
| AGATGGCAGTGTGGATGCCG+GGG | + | chr5_1:51445703-51445722 | Msa0735760:CDS | 60.0% | |
| TAGGCGGGGAAGGGAAGGGA+GGG | - | chr5_1:51445269-51445288 | None:intergenic | 65.0% | |
| TTAGGCGGGGAAGGGAAGGG+AGG | - | chr5_1:51445270-51445289 | None:intergenic | 65.0% | |
| GGGTTTAGGCGGGGAAGGGA+AGG | - | chr5_1:51445274-51445293 | None:intergenic | 65.0% | |
| GGCAGTGTGGATGCCGGGGT+TGG | + | chr5_1:51445707-51445726 | Msa0735760:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 51443645 | 51447542 | 51443645 | ID=Msa0735760;Name=Msa0735760 |
| chr5_1 | mRNA | 51443645 | 51447542 | 51443645 | ID=Msa0735760-mRNA-1;Parent=Msa0735760;Name=Msa0735760-mRNA-1;_AED=0.31;_eAED=0.31;_QI=17|0.77|0.8|1|0.88|0.8|10|0|429 |
| chr5_1 | exon | 51443645 | 51443770 | 51443645 | ID=Msa0735760-mRNA-1:exon:14499;Parent=Msa0735760-mRNA-1 |
| chr5_1 | exon | 51443988 | 51444189 | 51443988 | ID=Msa0735760-mRNA-1:exon:14500;Parent=Msa0735760-mRNA-1 |
| chr5_1 | exon | 51444277 | 51444434 | 51444277 | ID=Msa0735760-mRNA-1:exon:14501;Parent=Msa0735760-mRNA-1 |
| chr5_1 | exon | 51444549 | 51444694 | 51444549 | ID=Msa0735760-mRNA-1:exon:14502;Parent=Msa0735760-mRNA-1 |
| chr5_1 | exon | 51444945 | 51444986 | 51444945 | ID=Msa0735760-mRNA-1:exon:14503;Parent=Msa0735760-mRNA-1 |
| chr5_1 | exon | 51445617 | 51445808 | 51445617 | ID=Msa0735760-mRNA-1:exon:14504;Parent=Msa0735760-mRNA-1 |
| chr5_1 | exon | 51446063 | 51446155 | 51446063 | ID=Msa0735760-mRNA-1:exon:14505;Parent=Msa0735760-mRNA-1 |
| chr5_1 | exon | 51446500 | 51446664 | 51446500 | ID=Msa0735760-mRNA-1:exon:14506;Parent=Msa0735760-mRNA-1 |
| chr5_1 | exon | 51446966 | 51447057 | 51446966 | ID=Msa0735760-mRNA-1:exon:14507;Parent=Msa0735760-mRNA-1 |
| chr5_1 | exon | 51447455 | 51447542 | 51447455 | ID=Msa0735760-mRNA-1:exon:14508;Parent=Msa0735760-mRNA-1 |
| chr5_1 | five_prime_UTR | 51443645 | 51443661 | 51443645 | ID=Msa0735760-mRNA-1:five_prime_utr;Parent=Msa0735760-mRNA-1 |
| chr5_1 | CDS | 51443662 | 51443770 | 51443662 | ID=Msa0735760-mRNA-1:cds;Parent=Msa0735760-mRNA-1 |
| chr5_1 | CDS | 51443988 | 51444189 | 51443988 | ID=Msa0735760-mRNA-1:cds;Parent=Msa0735760-mRNA-1 |
| chr5_1 | CDS | 51444277 | 51444434 | 51444277 | ID=Msa0735760-mRNA-1:cds;Parent=Msa0735760-mRNA-1 |
| chr5_1 | CDS | 51444549 | 51444694 | 51444549 | ID=Msa0735760-mRNA-1:cds;Parent=Msa0735760-mRNA-1 |
| chr5_1 | CDS | 51444945 | 51444986 | 51444945 | ID=Msa0735760-mRNA-1:cds;Parent=Msa0735760-mRNA-1 |
| chr5_1 | CDS | 51445617 | 51445808 | 51445617 | ID=Msa0735760-mRNA-1:cds;Parent=Msa0735760-mRNA-1 |
| chr5_1 | CDS | 51446063 | 51446155 | 51446063 | ID=Msa0735760-mRNA-1:cds;Parent=Msa0735760-mRNA-1 |
| chr5_1 | CDS | 51446500 | 51446664 | 51446500 | ID=Msa0735760-mRNA-1:cds;Parent=Msa0735760-mRNA-1 |
| chr5_1 | CDS | 51446966 | 51447057 | 51446966 | ID=Msa0735760-mRNA-1:cds;Parent=Msa0735760-mRNA-1 |
| chr5_1 | CDS | 51447455 | 51447542 | 51447455 | ID=Msa0735760-mRNA-1:cds;Parent=Msa0735760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
