AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0736450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0736450 MtrunA17_Chr5g0433781 91.091 651 51 1 1 651 1 644 0.0 1242
Msa0736450 MtrunA17_Chr3g0109821 63.596 673 216 19 1 650 1 667 0.0 803
Msa0736450 MtrunA17_Chr6g0481091 74.375 160 41 0 1 160 1 160 9.80e-86 268
Msa0736450 MtrunA17_Chr2g0309891 74.545 165 41 1 1 164 1 165 1.76e-85 271
Msa0736450 MtrunA17_Chr5g0400461 64.417 163 48 2 1 156 1 160 1.38e-67 224
Msa0736450 MtrunA17_Chr4g0054791 61.635 159 58 1 1 156 1 159 1.86e-64 215
Msa0736450 MtrunA17_Chr1g0201021 61.728 162 61 1 8 169 21 181 1.46e-60 212
Msa0736450 MtrunA17_Chr2g0318081 56.329 158 67 1 1 158 11 166 5.98e-60 204
Msa0736450 MtrunA17_Chr8g0372121 48.352 182 89 3 1 180 1 179 1.11e-58 199
Msa0736450 MtrunA17_Chr8g0359921 57.500 160 64 2 1 158 9 166 1.88e-58 199
Msa0736450 MtrunA17_Chr4g0017921 48.691 191 88 4 5 192 7 190 3.44e-58 199
Msa0736450 MtrunA17_Chr1g0200561 56.494 154 64 2 6 158 19 170 1.55e-57 198
Msa0736450 MtrunA17_Chr5g0428991 61.589 151 58 0 6 156 25 175 3.33e-57 204
Msa0736450 MtrunA17_Chr3g0128111 58.389 149 62 0 9 157 45 193 4.24e-57 193
Msa0736450 MtrunA17_Chr3g0128151 60.131 153 61 0 5 157 21 173 1.91e-56 201
Msa0736450 MtrunA17_Chr3g0124761 57.500 160 62 4 4 160 5 161 7.96e-56 191
Msa0736450 MtrunA17_Chr5g0405211 52.903 155 70 2 6 159 8 160 1.48e-55 192
Msa0736450 MtrunA17_Chr4g0056541 52.500 160 73 2 6 164 7 164 2.22e-55 192
Msa0736450 MtrunA17_Chr3g0130101 53.086 162 75 1 8 169 9 169 5.12e-55 191
Msa0736450 MtrunA17_Chr3g0092671 57.669 163 66 3 8 169 7 167 8.36e-55 196
Msa0736450 MtrunA17_Chr6g0484441 57.895 152 60 2 6 157 5 152 8.42e-55 189
Msa0736450 MtrunA17_Chr4g0018391 48.000 175 88 3 6 179 7 179 8.97e-55 190
Msa0736450 MtrunA17_Chr8g0364791 52.071 169 80 1 1 169 1 168 3.96e-54 191
Msa0736450 MtrunA17_Chr5g0398971 54.902 153 66 3 6 156 7 158 4.04e-54 189
Msa0736450 MtrunA17_Chr1g0197351 57.558 172 66 3 4 169 40 210 5.49e-54 192
Msa0736450 MtrunA17_Chr2g0318101 54.491 167 61 4 6 159 15 179 6.73e-54 188
Msa0736450 MtrunA17_Chr2g0309331 52.903 155 69 3 4 156 8 160 8.47e-54 187
Msa0736450 MtrunA17_Chr4g0042561 54.088 159 67 2 2 156 5 161 8.78e-54 185
Msa0736450 MtrunA17_Chr1g0197361 56.442 163 68 3 8 169 10 170 1.24e-53 193
Msa0736450 MtrunA17_Chr7g0252971 50.877 171 69 3 4 161 6 174 1.39e-53 187
Msa0736450 MtrunA17_Chr8g0384721 47.317 205 86 6 4 189 5 206 3.95e-53 184
Msa0736450 MtrunA17_Chr5g0417791 52.500 160 70 2 4 159 1 158 2.26e-52 181
Msa0736450 MtrunA17_Chr4g0060931 53.165 158 70 3 4 159 15 170 3.40e-52 184
Msa0736450 MtrunA17_Chr7g0214071 56.774 155 58 4 4 156 13 160 4.66e-52 180
Msa0736450 MtrunA17_Chr2g0316971 57.051 156 61 3 6 157 23 176 4.96e-52 184
Msa0736450 MtrunA17_Chr6g0453451 53.416 161 61 3 6 159 20 173 5.14e-52 182
Msa0736450 MtrunA17_Chr3g0130731 52.000 175 71 5 4 168 5 176 1.11e-51 180
Msa0736450 MtrunA17_Chr3g0091921 55.195 154 65 3 6 157 16 167 1.77e-51 180
Msa0736450 MtrunA17_Chr8g0346001 49.693 163 68 3 6 156 15 175 1.90e-51 184
Msa0736450 MtrunA17_Chr1g0147421 55.769 156 62 4 5 157 26 177 2.98e-51 181
Msa0736450 MtrunA17_Chr6g0461661 49.398 166 78 3 3 164 15 178 3.26e-51 181
Msa0736450 MtrunA17_Chr8g0384201 49.112 169 85 1 1 169 1 168 5.67e-51 184
Msa0736450 MtrunA17_Chr3g0139331 54.194 155 65 3 5 157 10 160 6.11e-51 180
Msa0736450 MtrunA17_Chr4g0047841 50.847 177 60 4 6 157 15 189 8.04e-51 179
Msa0736450 MtrunA17_Chr7g0253011 51.534 163 71 4 4 160 15 175 2.35e-50 179
Msa0736450 MtrunA17_Chr6g0453131 49.091 165 72 3 6 160 15 177 8.77e-50 178
Msa0736450 MtrunA17_Chr2g0326361 53.165 158 66 4 5 156 13 168 1.18e-49 176
Msa0736450 MtrunA17_Chr7g0263931 50.314 159 71 4 4 156 9 165 6.14e-49 174
Msa0736450 MtrunA17_Chr4g0076731 52.288 153 68 3 8 159 56 204 2.51e-48 175
Msa0736450 MtrunA17_Chr1g0183741 54.140 157 60 4 4 156 8 156 3.37e-48 170
Msa0736450 MtrunA17_Chr2g0312321 50.000 172 78 5 1 168 6 173 2.14e-47 169
Msa0736450 MtrunA17_Chr7g0261411 55.556 153 60 4 4 154 8 154 2.15e-47 168
Msa0736450 MtrunA17_Chr8g0361731 46.584 161 73 3 8 157 16 174 9.11e-47 170
Msa0736450 MtrunA17_Chr5g0417001 46.250 160 74 3 8 157 16 173 3.60e-46 168
Msa0736450 MtrunA17_Chr7g0217721 55.725 131 56 1 4 134 17 145 5.55e-45 164
Msa0736450 MtrunA17_Chr2g0311661 39.669 242 118 8 8 231 23 254 6.15e-45 162
Msa0736450 MtrunA17_Chr3g0144271 59.542 131 48 3 6 133 23 151 2.16e-44 164
Msa0736450 MtrunA17_Chr2g0311651 48.485 165 69 4 8 157 24 187 8.76e-44 159
Msa0736450 MtrunA17_Chr7g0217711 54.198 131 58 1 4 134 17 145 2.21e-43 154
Msa0736450 MtrunA17_Chr4g0038751 46.154 156 74 4 8 160 17 165 3.95e-42 154
Msa0736450 MtrunA17_Chr8g0345671 51.316 152 65 4 6 154 11 156 1.48e-41 155
Msa0736450 MtrunA17_Chr5g0442771 46.584 161 72 4 8 156 20 178 9.16e-41 151
Msa0736450 MtrunA17_Chr2g0321741 51.880 133 55 4 26 158 12 135 5.39e-40 150
Msa0736450 MtrunA17_Chr8g0385991 42.935 184 87 5 6 181 14 187 3.85e-39 144
Msa0736450 MtrunA17_Chr3g0131911 45.342 161 74 3 6 156 14 170 2.07e-37 139
Msa0736450 MtrunA17_Chr8g0345711 51.538 130 57 4 6 131 12 139 2.81e-37 137
Msa0736450 MtrunA17_Chr8g0345691 46.711 152 72 4 6 154 12 157 4.79e-37 143
Msa0736450 MtrunA17_Chr4g0026141 43.226 155 81 4 6 153 5 159 2.49e-36 137
Msa0736450 MtrunA17_Chr2g0321631 43.226 155 80 4 7 153 5 159 1.70e-35 134
Msa0736450 MtrunA17_Chr8g0345731 43.312 157 75 5 6 156 24 172 2.52e-33 125
Msa0736450 MtrunA17_Chr7g0266701 40.361 166 87 6 6 160 4 168 2.70e-33 128
Msa0736450 MtrunA17_Chr8g0345701 43.448 145 62 5 4 131 5 146 3.04e-30 117
Msa0736450 MtrunA17_Chr4g0050701 44.615 130 60 3 6 133 11 130 7.86e-30 116
Msa0736450 MtrunA17_Chr8g0345741 46.610 118 59 3 17 131 2 118 1.51e-29 114
Msa0736450 MtrunA17_Chr3g0113001 41.104 163 76 3 61 220 18 163 1.73e-29 119
Msa0736450 MtrunA17_Chr8g0345721 39.881 168 62 6 1 131 26 191 2.56e-29 115
Msa0736450 MtrunA17_Chr3g0113031 38.312 154 74 2 71 220 3 139 8.13e-26 107
Msa0736450 MtrunA17_Chr7g0243371 47.664 107 54 2 56 160 12 118 1.55e-25 101
Msa0736450 MtrunA17_Chr8g0384351 33.684 190 99 7 2 191 6 168 3.26e-19 85.9
Msa0736450 MtrunA17_Chr7g0251651 35.659 129 79 3 4 131 16 141 5.96e-19 85.5
Msa0736450 MtrunA17_Chr7g0251661 34.351 131 82 3 2 131 6 133 7.64e-18 81.3
Msa0736450 MtrunA17_Chr3g0130321 32.258 186 92 8 4 170 5 175 9.98e-17 79.3
Msa0736450 MtrunA17_Chr7g0251671 33.071 127 81 3 6 131 10 133 3.00e-15 73.9
Msa0736450 MtrunA17_Chr3g0113011 54.902 51 23 0 4 54 17 67 4.81e-14 67.4
Msa0736450 MtrunA17_Chr3g0113041 50.000 54 27 0 4 57 17 70 1.23e-12 63.5
Msa0736450 MtrunA17_Chr1g0194791 58.696 46 18 1 8 52 48 93 5.94e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0736450 AT1G65910.1 44.702 604 255 21 1 580 1 549 1.21e-148 445
Msa0736450 AT3G03200.1 38.977 567 233 22 1 557 1 464 1.57e-108 336
Msa0736450 AT5G17260.1 40.180 555 216 20 1 545 1 449 3.48e-108 335
Msa0736450 AT3G17730.1 75.000 160 40 0 1 160 1 160 3.75e-87 273
Msa0736450 AT1G54330.1 74.699 166 38 2 1 166 1 162 7.52e-82 261
Msa0736450 AT4G17980.1 63.750 160 54 2 1 156 1 160 4.38e-69 226
Msa0736450 AT4G17980.2 63.750 160 54 2 1 156 1 160 7.02e-69 226
Msa0736450 AT5G46590.1 60.248 161 62 2 1 159 1 161 3.80e-66 219
Msa0736450 AT3G10500.1 47.521 242 115 3 4 234 7 247 9.88e-63 218
Msa0736450 AT5G04410.1 59.639 166 66 1 4 169 7 171 4.74e-62 216
Msa0736450 AT5G46590.2 60.248 161 58 3 1 160 1 156 1.16e-61 207
Msa0736450 AT3G10480.2 59.763 169 67 1 1 169 22 189 1.66e-61 212
Msa0736450 AT1G32510.1 49.774 221 91 6 1 205 1 217 3.63e-61 206
Msa0736450 AT3G10480.1 60.000 170 66 2 1 169 22 190 6.03e-61 210
Msa0736450 AT4G27410.2 56.962 158 66 1 1 158 9 164 6.77e-61 205
Msa0736450 AT3G15500.1 58.228 158 64 1 1 158 9 164 1.95e-60 205
Msa0736450 AT3G10490.1 59.639 166 65 2 5 169 26 190 1.19e-59 200
Msa0736450 AT1G33060.1 59.211 152 62 0 5 156 23 174 6.01e-59 209
Msa0736450 AT1G33060.2 59.211 152 62 0 5 156 23 174 6.48e-59 209
Msa0736450 AT1G34180.3 57.407 162 68 1 8 169 18 178 9.58e-59 204
Msa0736450 AT1G34190.1 57.407 162 68 1 8 169 18 178 1.60e-58 206
Msa0736450 AT5G24590.2 55.901 161 70 1 1 160 8 168 2.54e-58 203
Msa0736450 AT3G10490.2 59.281 167 66 2 4 169 25 190 3.29e-58 203
Msa0736450 AT1G52890.1 50.829 181 84 2 1 181 9 184 3.44e-58 199
Msa0736450 AT4G35580.1 52.198 182 87 0 5 186 8 189 7.94e-58 203
Msa0736450 AT4G35580.3 52.198 182 87 0 5 186 8 189 1.05e-57 204
Msa0736450 AT4G35580.2 52.198 182 87 0 5 186 8 189 1.10e-57 204
Msa0736450 AT1G34180.1 57.407 162 68 1 8 169 18 178 1.12e-57 204
Msa0736450 AT4G27410.3 52.000 175 65 2 1 158 9 181 1.15e-57 197
Msa0736450 AT1G71930.2 55.556 153 65 2 5 156 8 158 7.34e-57 196
Msa0736450 AT1G71930.1 55.556 153 65 2 5 156 8 158 7.34e-57 196
Msa0736450 AT3G18400.1 55.844 154 65 2 6 159 5 155 1.20e-56 194
Msa0736450 AT1G33280.1 54.167 168 67 4 6 170 8 168 1.48e-56 194
Msa0736450 AT2G18060.3 52.229 157 72 2 1 156 4 158 1.14e-55 194
Msa0736450 AT2G18060.1 52.229 157 72 2 1 156 4 158 1.14e-55 194
Msa0736450 AT1G34180.4 53.448 174 68 2 8 169 18 190 1.28e-55 196
Msa0736450 AT3G49530.2 54.430 158 71 1 5 161 12 169 1.38e-55 195
Msa0736450 AT3G10480.3 50.739 203 65 3 1 169 22 223 1.87e-55 197
Msa0736450 AT3G49530.1 54.430 158 71 1 5 161 12 169 3.73e-55 195
Msa0736450 AT5G66300.1 52.174 161 75 2 4 163 10 169 3.76e-55 190
Msa0736450 AT4G10350.1 53.797 158 68 2 6 160 9 164 4.53e-55 191
Msa0736450 AT4G36160.2 52.597 154 70 2 4 156 12 163 5.72e-55 192
Msa0736450 AT5G64060.1 51.479 169 81 1 1 169 1 168 5.90e-55 191
Msa0736450 AT4G36160.1 52.597 154 70 2 4 156 8 159 5.96e-55 192
Msa0736450 AT4G36160.3 52.597 154 70 2 4 156 8 159 5.96e-55 192
Msa0736450 AT3G04070.2 53.939 165 62 4 5 157 9 171 7.06e-55 191
Msa0736450 AT2G24430.2 58.710 155 59 3 5 157 15 166 7.70e-55 190
Msa0736450 AT2G24430.1 58.710 155 59 3 5 157 15 166 7.70e-55 190
Msa0736450 AT1G34180.2 53.448 174 68 2 8 169 18 190 9.92e-55 196
Msa0736450 AT1G12260.2 50.932 161 76 3 6 165 7 165 6.57e-54 188
Msa0736450 AT1G01720.1 57.325 157 60 4 4 156 5 158 1.00e-53 186
Msa0736450 AT1G12260.1 50.932 161 76 3 6 165 7 165 1.54e-53 189
Msa0736450 AT5G39610.1 56.129 155 64 3 4 156 18 170 2.37e-53 185
Msa0736450 AT1G69490.1 43.038 237 119 7 5 235 8 234 3.17e-53 184
Msa0736450 AT1G62700.1 52.121 165 74 4 6 168 7 168 3.69e-53 187
Msa0736450 AT1G62700.2 52.121 165 74 4 6 168 7 168 3.69e-53 187
Msa0736450 AT1G79580.3 54.194 155 66 3 4 156 15 166 4.00e-53 187
Msa0736450 AT1G79580.5 54.194 155 66 3 4 156 15 166 4.00e-53 187
Msa0736450 AT1G79580.4 54.194 155 66 3 4 156 15 166 4.00e-53 187
Msa0736450 AT1G79580.2 54.194 155 66 3 4 156 15 166 4.00e-53 187
Msa0736450 AT1G79580.1 54.194 155 66 3 4 156 15 166 4.00e-53 187
Msa0736450 AT1G77450.1 54.938 162 67 4 2 160 6 164 6.08e-53 182
Msa0736450 AT5G53950.1 56.962 158 62 3 6 159 17 172 8.68e-53 186
Msa0736450 AT5G09330.5 53.254 169 78 1 1 169 1 168 1.29e-52 189
Msa0736450 AT5G09330.2 53.254 169 78 1 1 169 1 168 1.29e-52 189
Msa0736450 AT5G09330.4 53.254 169 78 1 1 169 1 168 1.29e-52 189
Msa0736450 AT5G09330.3 53.254 169 78 1 1 169 1 168 1.29e-52 189
Msa0736450 AT5G09330.1 53.254 169 78 1 1 169 1 168 1.29e-52 189
Msa0736450 AT3G04070.1 49.171 181 62 4 5 157 9 187 1.48e-52 185
Msa0736450 AT5G07680.2 54.777 157 67 3 4 158 1 155 1.50e-52 184
Msa0736450 AT5G07680.1 54.777 157 67 3 4 158 15 169 1.71e-52 184
Msa0736450 AT5G62380.2 52.597 154 66 3 6 156 7 156 3.39e-52 184
Msa0736450 AT5G62380.1 52.597 154 66 3 6 156 7 156 3.39e-52 184
Msa0736450 AT3G29035.1 42.609 230 98 4 4 203 22 247 4.48e-52 182
Msa0736450 AT5G61430.1 54.487 156 67 3 4 157 14 167 5.33e-52 183
Msa0736450 AT3G15170.1 54.088 159 67 3 6 160 20 176 8.60e-52 181
Msa0736450 AT5G18270.2 54.777 157 66 3 4 157 19 173 1.16e-51 182
Msa0736450 AT5G08790.1 46.078 204 101 4 4 201 5 205 1.97e-51 179
Msa0736450 AT1G32770.1 50.610 164 66 4 6 156 16 177 1.97e-51 182
Msa0736450 AT2G46770.1 44.724 199 89 4 6 185 16 212 2.12e-51 182
Msa0736450 AT3G12977.1 51.572 159 74 2 1 158 13 169 3.86e-51 179
Msa0736450 AT1G61110.1 51.163 172 69 4 6 164 16 185 4.08e-51 180
Msa0736450 AT5G18270.1 54.140 157 67 3 4 157 19 173 4.21e-51 180
Msa0736450 AT3G61910.1 47.368 171 70 4 6 159 11 178 5.35e-50 177
Msa0736450 AT2G33480.1 52.288 153 68 1 4 156 13 160 1.01e-49 174
Msa0736450 AT1G56010.2 53.374 163 68 4 1 158 14 173 2.10e-49 175
Msa0736450 AT2G02450.1 52.288 153 68 3 8 159 53 201 2.33e-49 177
Msa0736450 AT2G02450.2 52.288 153 68 3 8 159 53 201 2.65e-49 177
Msa0736450 AT2G33480.2 52.288 153 66 2 4 156 13 158 3.20e-49 173
Msa0736450 AT5G63790.1 52.500 160 68 4 2 156 46 202 4.10e-49 174
Msa0736450 AT5G63790.2 52.500 160 68 4 2 156 56 212 5.24e-49 174
Msa0736450 AT1G76420.1 54.839 155 65 3 5 157 21 172 5.90e-49 174
Msa0736450 AT5G22290.1 50.980 153 68 2 1 153 16 161 1.00e-48 174
Msa0736450 AT1G32870.2 57.229 166 66 3 6 169 10 172 3.36e-48 177
Msa0736450 AT3G15510.1 52.761 163 62 4 10 159 21 181 3.37e-48 173
Msa0736450 AT1G32870.1 57.229 166 66 3 6 169 10 172 4.56e-48 177
Msa0736450 AT1G32870.3 57.229 166 66 3 6 169 46 208 6.86e-48 177
Msa0736450 AT3G04060.1 52.866 157 69 3 4 157 18 172 7.01e-48 172
Msa0736450 AT3G44290.2 54.110 146 59 3 8 153 16 153 8.80e-48 168
Msa0736450 AT5G13180.1 52.903 155 65 3 4 156 12 160 1.24e-47 168
Msa0736450 AT2G27300.1 51.592 157 68 2 1 157 9 157 1.88e-47 170
Msa0736450 AT2G17040.1 42.056 214 110 6 8 216 8 212 4.01e-47 167
Msa0736450 AT3G44290.1 54.110 146 59 3 8 153 16 153 4.22e-47 169
Msa0736450 AT2G43000.1 51.974 152 70 2 8 158 20 169 1.13e-46 166
Msa0736450 AT1G26870.1 46.108 167 77 3 6 161 16 180 1.91e-46 170
Msa0736450 AT5G39820.1 45.198 177 70 4 8 160 22 195 5.53e-46 166
Msa0736450 AT4G28530.1 52.353 170 55 7 6 156 10 172 7.82e-45 164
Msa0736450 AT1G52880.1 53.125 160 61 5 10 157 21 178 7.06e-43 157
Msa0736450 AT5G04395.1 47.260 146 63 2 2 133 24 169 7.65e-39 142
Msa0736450 AT3G12910.1 45.238 168 70 6 8 157 23 186 6.90e-37 140
Msa0736450 AT4G10350.2 52.041 98 47 0 63 160 20 117 1.05e-32 128
Msa0736450 AT5G61430.2 58.763 97 38 2 63 157 8 104 4.87e-32 125
Msa0736450 AT3G12977.2 55.670 97 42 1 63 158 20 116 7.16e-32 124
Msa0736450 AT4G01520.1 42.105 152 78 5 7 153 5 151 3.54e-31 124
Msa0736450 AT3G44350.2 40.260 154 87 4 9 157 8 161 1.54e-30 120
Msa0736450 AT5G22380.1 41.447 152 82 5 9 153 8 159 3.50e-30 119
Msa0736450 AT4G01550.1 43.421 152 77 4 9 156 7 153 1.45e-29 122
Msa0736450 AT1G56010.1 54.545 99 42 1 63 158 8 106 1.73e-29 118
Msa0736450 AT4G01540.4 40.909 154 81 5 9 157 7 155 3.10e-29 120
Msa0736450 AT4G01540.2 41.333 150 78 5 9 153 7 151 3.92e-29 120
Msa0736450 AT4G01540.3 40.667 150 79 4 9 153 7 151 4.35e-29 120
Msa0736450 AT4G01540.1 41.333 150 78 5 9 153 7 151 6.67e-29 120
Msa0736450 AT2G33480.3 53.191 94 44 0 63 156 10 103 1.45e-28 114
Msa0736450 AT5G64530.2 42.537 134 61 4 4 135 1 120 3.42e-28 111
Msa0736450 AT5G64530.1 43.182 132 59 4 4 133 1 118 9.05e-28 110
Msa0736450 AT4G28530.2 54.545 110 30 3 6 98 10 116 9.38e-28 114
Msa0736450 AT3G44350.1 39.310 145 83 4 9 148 8 152 2.61e-27 108
Msa0736450 AT3G04420.2 36.774 155 91 2 7 159 4 153 4.28e-27 112
Msa0736450 AT1G02230.1 40.132 152 79 5 7 153 4 148 1.02e-26 112
Msa0736450 AT3G04420.1 36.774 155 91 2 7 159 4 153 1.66e-26 111
Msa0736450 AT3G10490.4 58.889 90 35 2 81 169 2 90 1.19e-24 106
Msa0736450 AT3G10490.3 58.889 90 35 2 81 169 2 90 1.19e-24 106
Msa0736450 AT1G02250.1 38.961 154 78 6 7 153 4 148 3.95e-24 105
Msa0736450 AT1G01010.1 31.250 224 122 7 9 207 6 222 1.17e-23 104
Msa0736450 AT1G02220.1 34.437 151 87 4 7 154 4 145 8.90e-22 98.6
Msa0736450 AT2G43000.2 48.889 90 45 1 70 158 2 91 9.60e-21 91.3
Msa0736450 AT3G56530.1 32.237 152 98 3 4 153 50 198 1.25e-18 87.8
Msa0736450 AT2G18060.2 45.070 71 37 1 86 156 2 70 3.86e-18 85.5
Msa0736450 AT3G55210.1 32.919 161 90 5 6 153 11 166 8.60e-18 84.7
Msa0736450 AT5G22290.2 53.731 67 25 1 87 153 2 62 3.29e-17 82.0
Msa0736450 AT5G14000.2 31.818 132 84 2 4 133 13 140 3.69e-17 79.7
Msa0736450 AT5G14000.1 31.818 132 84 2 4 133 13 140 3.21e-16 78.2
Msa0736450 AT5G50820.1 33.582 134 75 4 4 133 15 138 7.25e-16 77.0
Msa0736450 AT3G04430.1 35.606 132 71 5 12 131 6 135 2.02e-15 75.9
Msa0736450 AT5G56620.3 31.548 168 79 7 4 139 41 204 2.06e-11 67.0
Msa0736450 AT5G56620.2 31.548 168 79 7 4 139 41 204 2.06e-11 67.0
Msa0736450 AT5G56620.1 31.548 168 79 7 4 139 41 204 2.61e-11 66.2
Msa0736450 AT4G29230.3 31.250 160 83 6 4 139 46 202 6.08e-11 65.5
Msa0736450 AT4G29230.2 31.481 162 80 7 4 139 45 201 8.10e-11 65.5
Msa0736450 AT4G29230.1 31.481 162 80 7 4 139 46 202 8.12e-11 65.5

Find 162 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTCTTCATTTACTAATTA+TGG 0.123529 5_1:-52910335 Msa0736450:CDS
TTTCATTGCCTCCAGGTTTC+AGG 0.142642 5_1:-52912897 Msa0736450:CDS
TTTGATGCATCGTGTTTATT+TGG 0.178984 5_1:-52908107 Msa0736450:CDS
CCCATGGCTCTCGTACAAAT+TGG 0.222002 5_1:-52911129 Msa0736450:CDS
CGACAAGGGATCATGGAAAT+TGG 0.232604 5_1:-52910400 Msa0736450:CDS
CCATATTGTCCTCCAACTTT+TGG 0.268556 5_1:+52910590 None:intergenic
TTGTTGCTTATTATCTAAAT+AGG 0.273542 5_1:-52912852 Msa0736450:CDS
ACGAATCGTGCAACCAAATC+TGG 0.280386 5_1:-52911247 Msa0736450:CDS
TATCTAAATAGGAAGATTAA+TGG 0.282813 5_1:-52912841 Msa0736450:CDS
ATCAAAGAAAATAGCAAGTT+TGG 0.283752 5_1:-52908152 Msa0736450:CDS
TTGATTGGTCACTTGTTATC+TGG 0.283981 5_1:+52910546 None:intergenic
CATTGTGTTCCCTTGATGTT+TGG 0.291674 5_1:+52908964 None:intergenic
TCTATAGAGTGTTTATTGTT+TGG 0.309883 5_1:+52908271 None:intergenic
TTCACTTAATCATGCTTCTC+AGG 0.318478 5_1:-52909444 Msa0736450:CDS
CCAAAAGTTGGAGGACAATA+TGG 0.318542 5_1:-52910590 Msa0736450:CDS
ATCCAAGGCTTGTAAATAAC+TGG 0.328844 5_1:+52909406 None:intergenic
TGTTTATTGTTTGGCATCAT+TGG 0.334489 5_1:+52908280 None:intergenic
TGATCTCCAATTCAATCTTA+TGG 0.341534 5_1:+52912818 None:intergenic
TCTTCTATAAAATTCTCGTT+GGG 0.348713 5_1:+52908454 None:intergenic
ATTATTACCTGGGAATGATA+TGG 0.349131 5_1:-52911320 Msa0736450:CDS
TCAAAAGTGGTTTGGTTTGT+TGG 0.358123 5_1:-52907995 Msa0736450:CDS
TGCCTTCCAATACCCAGATT+TGG 0.362335 5_1:+52911234 None:intergenic
TGAGATCACTGAGGAAATAA+AGG 0.367407 5_1:-52908395 Msa0736450:CDS
TGAAACCACTCCTAGCTTGC+AGG 0.368248 5_1:-52911071 Msa0736450:intron
GGAGGTCCAAAGTATATATA+TGG 0.371929 5_1:-52912926 None:intergenic
GGCTTGCTCACCTCACAATA+TGG 0.386993 5_1:-52910453 Msa0736450:CDS
GTCCAGTTATTTACAAGCCT+TGG 0.389203 5_1:-52909408 Msa0736450:CDS
ATTGTGTTCCCTTGATGTTT+GGG 0.390866 5_1:+52908965 None:intergenic
GGACAATATGGTAATATTAC+AGG 0.392348 5_1:-52910578 Msa0736450:CDS
GTAGTTGGAAGACTAAATAA+TGG 0.394217 5_1:+52910356 None:intergenic
TAATGGCCATAAGATTGAAT+TGG 0.404348 5_1:-52912824 Msa0736450:CDS
ATAGCTCAACGTTTGTTGAT+TGG 0.409354 5_1:+52910531 None:intergenic
ATCTTTCTTCATGAAGTTCA+AGG 0.415168 5_1:-52908209 Msa0736450:CDS
TCTGGGTATTGGAAGGCAAC+CGG 0.415206 5_1:-52911229 Msa0736450:CDS
AGGCCTATGTGATGGGGAAA+TGG 0.422475 5_1:-52908189 Msa0736450:CDS
CCAGGGAAATCATTATTACC+TGG 0.422516 5_1:-52911331 Msa0736450:intron
GTAGAGAATTTGAGATGGAT+TGG 0.422814 5_1:-52909206 Msa0736450:CDS
AATTGCAAATGATATCTTGC+AGG 0.423405 5_1:-52909474 Msa0736450:CDS
TGGGATATGTTGACAAAACT+TGG 0.424746 5_1:-52909298 Msa0736450:CDS
ATTTCTTTAGCCCTCGTGAT+AGG 0.430194 5_1:-52911291 Msa0736450:CDS
AAATTATTTGATGCAAATGA+AGG 0.433232 5_1:-52910474 Msa0736450:CDS
AAACCTGGAGGCAATGAAAC+AGG 0.435510 5_1:+52912901 None:intergenic
GGAATGAGTCAAAAGTGGTT+TGG 0.437975 5_1:-52908003 Msa0736450:CDS
CACTTGTTATCTGGTTTGCA+TGG 0.440837 5_1:+52910555 None:intergenic
TTAGTAAATGAAGAAGTAGT+TGG 0.441517 5_1:+52910341 None:intergenic
CCATGGCTCTCGTACAAATT+GGG 0.441564 5_1:-52911128 Msa0736450:CDS
AGATGCAAAGATGATGATAA+TGG 0.441835 5_1:-52908242 Msa0736450:CDS
CTCTTCCTCGATAGTAAACT+AGG 0.442628 5_1:+52911155 None:intergenic
GTGCAACCAAATCTGGGTAT+TGG 0.448103 5_1:-52911240 Msa0736450:CDS
AGTGTGGTCTTGAAGGAAAT+AGG 0.448391 5_1:-52907950 Msa0736450:CDS
ATCTTCTATAAAATTCTCGT+TGG 0.454762 5_1:+52908453 None:intergenic
CTTGGATGGAGGGTATGTTA+TGG 0.457226 5_1:+52910310 None:intergenic
AAAGGTTAGTCATAGAATGT+TGG 0.457270 5_1:-52908377 Msa0736450:CDS
GTTTACTATGCCTCCATTGG+AGG 0.458982 5_1:-52909549 Msa0736450:CDS
TACTATGCCTCCATTGGAGG+TGG 0.460939 5_1:-52909546 Msa0736450:CDS
GACAAGGGATCATGGAAATT+GGG 0.465207 5_1:-52910399 Msa0736450:CDS
GATTCGTTCTAGATCCATTC+GGG 0.466518 5_1:+52911263 None:intergenic
GCACCTGTTTCATTGCCTCC+AGG 0.468560 5_1:-52912904 Msa0736450:CDS
CAAATTCTCTACCATCCGTT+TGG 0.471237 5_1:+52909217 None:intergenic
GTTGGTGTAAAATGTGAGAA+AGG 0.471420 5_1:-52907977 Msa0736450:CDS
AAAGTAAAATCATCTTCATA+AGG 0.480913 5_1:+52909365 None:intergenic
AGGATTAAGTGTGGTCTTGA+AGG 0.480916 5_1:-52907957 Msa0736450:CDS
TAGGTTTACTATGCCTCCAT+TGG 0.482015 5_1:-52909552 Msa0736450:CDS
GTGGAGGAATTTCCTCAAGT+TGG 0.490438 5_1:-52909527 Msa0736450:CDS
CGATTCGTTCTAGATCCATT+CGG 0.490510 5_1:+52911262 None:intergenic
AGAAGGGGAACCTGCAAGCT+AGG 0.491636 5_1:+52911061 None:intergenic
AACACAAGATCTATAGAGAT+AGG 0.493319 5_1:-52909266 Msa0736450:CDS
GAGCATGAAATCTCCTCGAT+TGG 0.494845 5_1:+52908987 None:intergenic
ATGATGTCAATGAATTCTCA+TGG 0.496801 5_1:-52908498 Msa0736450:CDS
TAGTTGGAAGACTAAATAAT+GGG 0.497545 5_1:+52910357 None:intergenic
CCCAATTTGTACGAGAGCCA+TGG 0.500594 5_1:+52911128 None:intergenic
TCACTTAATCATGCTTCTCA+GGG 0.500637 5_1:-52909443 Msa0736450:CDS
AAGTTCAAGGCCTATGTGAT+GGG 0.501395 5_1:-52908196 Msa0736450:CDS
GATGCATCGTGTTTATTTGG+AGG 0.502081 5_1:-52908104 Msa0736450:CDS
AATGGTACGACAAGGGATCA+TGG 0.502815 5_1:-52910407 Msa0736450:CDS
TTGAGCTATACTCTGAAAGA+AGG 0.503430 5_1:-52910517 Msa0736450:CDS
ATGAATATCGTCTTGATGAG+AGG 0.503672 5_1:-52911099 Msa0736450:CDS
TCCTCAGTGATCTCAAAGCT+TGG 0.503838 5_1:+52908403 None:intergenic
ACAGTGATTGTGCCAAAAGT+TGG 0.507511 5_1:-52910602 Msa0736450:CDS
AGCATGAAATCTCCTCGATT+GGG 0.508079 5_1:+52908988 None:intergenic
CCAATTTGTACGAGAGCCAT+GGG 0.509568 5_1:+52911129 None:intergenic
CATGAATGATATGAGCTCCA+TGG 0.513072 5_1:-52909318 Msa0736450:CDS
AATCACATGAGAGAGTCAAA+TGG 0.514617 5_1:-52908024 Msa0736450:CDS
TGTGAACCGTGGGACTTGCC+AGG 0.519080 5_1:-52912772 Msa0736450:intron
AATTCTCAAGCTCGAGCAGT+AGG 0.521751 5_1:-52911190 Msa0736450:CDS
GGAAATTCCTCCACCTCCAA+TGG 0.528982 5_1:+52909536 None:intergenic
ATCAAGAGTCAAAGGCCAAA+CGG 0.530614 5_1:-52909232 Msa0736450:CDS
AGGTTTCAGGTTCCACCCTA+CGG 0.532914 5_1:-52912884 Msa0736450:CDS
TTTCATGCTCCCAAACATCA+AGG 0.535031 5_1:-52908974 Msa0736450:CDS
CAGGGAAATCATTATTACCT+GGG 0.538350 5_1:-52911330 Msa0736450:CDS
GAGACTTCTCTCAATATCAA+TGG 0.542689 5_1:-52910425 Msa0736450:CDS
AAGATGATGATAATGGAGAA+TGG 0.544768 5_1:-52908235 Msa0736450:CDS
ATGAATGATATGAGCTCCAT+GGG 0.545336 5_1:-52909317 Msa0736450:CDS
TATGCCTCCATTGGAGGTGG+AGG 0.545899 5_1:-52909543 Msa0736450:CDS
TGAGCTATACTCTGAAAGAA+GGG 0.546148 5_1:-52910516 Msa0736450:CDS
CGAATCGTGCAACCAAATCT+GGG 0.546533 5_1:-52911246 Msa0736450:CDS
GAAGTTCAAGGCCTATGTGA+TGG 0.547907 5_1:-52908197 Msa0736450:CDS
TCATGGGGATTCATCAATGA+TGG 0.548361 5_1:-52908481 Msa0736450:CDS
CTGGGTATTGGAAGGCAACC+GGG 0.551323 5_1:-52911228 Msa0736450:CDS
TGATGTCAATGAATTCTCAT+GGG 0.556387 5_1:-52908497 Msa0736450:CDS
CTGTACTCTTCTTGATCACA+CGG 0.568059 5_1:+52910621 None:intergenic
TACCACTCCATATCATTCCC+AGG 0.569597 5_1:+52911313 None:intergenic
GCAACAAGTTCTTCATCCGT+AGG 0.570402 5_1:+52912868 None:intergenic
ATTCTCAAGCTCGAGCAGTA+GGG 0.570616 5_1:-52911189 Msa0736450:CDS
GTTCCATTTCCCCATCACAT+AGG 0.572384 5_1:+52908186 None:intergenic
CAACAAGTTCTTCATCCGTA+GGG 0.572552 5_1:+52912869 None:intergenic
CAAATGGAATGAGTCAAAAG+TGG 0.572775 5_1:-52908008 Msa0736450:CDS
AGTGTGCAAGGATGCAACAT+AGG 0.574842 5_1:-52909571 Msa0736450:CDS
TGAATTTGAAGTGTTTGTGA+AGG 0.576360 5_1:+52908310 None:intergenic
GTAGGGTGGAACCTGAAACC+TGG 0.578503 5_1:+52912886 None:intergenic
TTCTCAAGCTCGAGCAGTAG+GGG 0.579595 5_1:-52911188 Msa0736450:CDS
TGAATATCGTCTTGATGAGA+GGG 0.582090 5_1:-52911098 Msa0736450:CDS
GTGATTGTGCCAAAAGTTGG+AGG 0.584888 5_1:-52910599 Msa0736450:CDS
CTTCCTTGTTGTGTCACATG+AGG 0.585636 5_1:+52909500 None:intergenic
AGGGAACACAATGGCATGCA+AGG 0.586165 5_1:-52908954 Msa0736450:intron
TATAGAGATAGGTGATCTAG+AGG 0.589067 5_1:-52909255 Msa0736450:CDS
GGATGGTAGAGAATTTGAGA+TGG 0.591998 5_1:-52909211 Msa0736450:CDS
TCTCTATAAGTGTGAACCGT+GGG 0.592650 5_1:-52912782 Msa0736450:CDS
ATTGCAAATGATATCTTGCA+GGG 0.597558 5_1:-52909473 Msa0736450:CDS
TTCGGGTACTTCCTATCACG+AGG 0.598759 5_1:+52911280 None:intergenic
AACCAAATCTGGGTATTGGA+AGG 0.600307 5_1:-52911236 Msa0736450:CDS
AAATTACCTGGCAAGTCCCA+CGG 0.604416 5_1:+52912766 None:intergenic
CTTCTATAAAATTCTCGTTG+GGG 0.605739 5_1:+52908455 None:intergenic
TCTAGAGGATCAAGAGTCAA+AGG 0.606182 5_1:-52909240 Msa0736450:CDS
AGAGTCAAAGGCCAAACGGA+TGG 0.606950 5_1:-52909228 Msa0736450:CDS
TCTTCCTCGATAGTAAACTA+GGG 0.609563 5_1:+52911156 None:intergenic
GGGATATGTTGACAAAACTT+GGG 0.610464 5_1:-52909297 Msa0736450:CDS
AACTTGGTGAAATAATGTCA+TGG 0.614916 5_1:+52908336 None:intergenic
TTCATGCTCCCAAACATCAA+GGG 0.617111 5_1:-52908973 Msa0736450:CDS
CATAACATACCCTCCATCCA+AGG 0.617588 5_1:-52910309 Msa0736450:intron
GTATTGGAAGGCAACCGGGA+AGG 0.620851 5_1:-52911224 Msa0736450:CDS
ACATGAGGTATTCCAACTTG+AGG 0.622240 5_1:+52909515 None:intergenic
ACAAAATGTTGTCCCAATCG+AGG 0.630733 5_1:-52909000 Msa0736450:CDS
CGTGATAGGAAGTACCCGAA+TGG 0.632326 5_1:-52911277 Msa0736450:CDS
AATTCCTCCACCTCCAATGG+AGG 0.633153 5_1:+52909539 None:intergenic
AAAACCCTAGTTTACTATCG+AGG 0.634321 5_1:-52911160 Msa0736450:CDS
ATGTGAGAAAGGATTAAGTG+TGG 0.635962 5_1:-52907966 Msa0736450:CDS
GTCTCATGTACCATATTGTG+AGG 0.636414 5_1:+52910443 None:intergenic
TGTACCACATGGGCTAGCCA+TGG 0.637402 5_1:-52907899 Msa0736450:CDS
CAAGTTCTTCATCCGTAGGG+TGG 0.638361 5_1:+52912872 None:intergenic
TACTTTCGTCAGAATACGAG+CGG 0.642003 5_1:-52908549 Msa0736450:intron
TCAATATCAATGGTACGACA+AGG 0.648156 5_1:-52910415 Msa0736450:CDS
ATACCTCATGTGACACAACA+AGG 0.650067 5_1:-52909503 Msa0736450:CDS
AGAAGATCAAGGGTTAGCCA+TGG 0.651875 5_1:+52907882 None:intergenic
GAGCTATACTCTGAAAGAAG+GGG 0.652301 5_1:-52910515 Msa0736450:CDS
TACCTGGGAATGATATGGAG+TGG 0.652400 5_1:-52911315 Msa0736450:CDS
GGGAACCTGCAAGCTAGGAG+TGG 0.654041 5_1:+52911066 None:intergenic
CAATATCAATGGTACGACAA+GGG 0.658341 5_1:-52910414 Msa0736450:CDS
TTTGGCGCTTTGTACCACAT+GGG 0.659507 5_1:-52907909 Msa0736450:CDS
GATGTCAATGAATTCTCATG+GGG 0.662201 5_1:-52908496 Msa0736450:CDS
ATCTCTATAAGTGTGAACCG+TGG 0.665137 5_1:-52912783 Msa0736450:CDS
ATATTGCACTAGAGTGTGCA+AGG 0.673783 5_1:-52909583 Msa0736450:CDS
ATGATGATAATGGAGAATGG+AGG 0.674089 5_1:-52908232 Msa0736450:CDS
TATCGAGGAAGAGCACCCCA+TGG 0.678830 5_1:-52911145 Msa0736450:CDS
TTAGCCATGGCTAGCCCATG+TGG 0.679756 5_1:+52907895 None:intergenic
GTGTTTGTGAAGGAACAACT+TGG 0.687378 5_1:+52908320 None:intergenic
AGTTCAAGGCCTATGTGATG+GGG 0.690612 5_1:-52908195 Msa0736450:CDS
CAAACATCAAGGGAACACAA+TGG 0.715678 5_1:-52908963 Msa0736450:CDS
TCGGGTACTTCCTATCACGA+GGG 0.722170 5_1:+52911281 None:intergenic
TCCAAGCTTTGAGATCACTG+AGG 0.734585 5_1:-52908404 Msa0736450:CDS
GGGTGGAACCTGAAACCTGG+AGG 0.736395 5_1:+52912889 None:intergenic
CAATTTGTACGAGAGCCATG+GGG 0.773296 5_1:+52911130 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAAAAATTAAATTTA+AGG + chr5_1:52908262-52908281 None:intergenic 0.0%
!!! ATTTATCTGATTTTTTATTT+CGG + chr5_1:52908155-52908174 None:intergenic 10.0%
!! TAAAAATTAAATTTAAGGAT+GGG + chr5_1:52908257-52908276 None:intergenic 10.0%
!! ATAAAAATTAAATTTAAGGA+TGG + chr5_1:52908258-52908277 None:intergenic 10.0%
!!! ATATTTTGCATTAATTATTT+TGG + chr5_1:52909248-52909267 None:intergenic 10.0%
!! AAAATAATTAATGCAAAATA+TGG - chr5_1:52909247-52909266 Msa0736450:CDS 10.0%
!! AAATAATTAATGCAAAATAT+GGG - chr5_1:52909248-52909267 Msa0736450:CDS 10.0%
!!! TTAAGATCAATATTTTTATA+TGG - chr5_1:52911753-52911772 Msa0736450:intron 10.0%
!!! TTAATTTGTATCTTATAAAA+AGG - chr5_1:52912024-52912043 Msa0736450:intron 10.0%
!!! AACTAAATAAATTTGGTAAT+TGG + chr5_1:52908285-52908304 None:intergenic 15.0%
!! ATTTGAGTAAAAAATAATGT+TGG + chr5_1:52908624-52908643 None:intergenic 15.0%
!! TAACGATCTAATTTATTAAT+TGG + chr5_1:52908794-52908813 None:intergenic 15.0%
!! AATAATTAATGCAAAATATG+GGG - chr5_1:52909249-52909268 Msa0736450:CDS 15.0%
!! TATTATTGCAAAAACTTAAT+AGG + chr5_1:52909388-52909407 None:intergenic 15.0%
!! ACAAAAATAAAACTTCAAAT+TGG + chr5_1:52909445-52909464 None:intergenic 15.0%
!! AAGCGAAAAAATTATTAAAA+TGG + chr5_1:52909797-52909816 None:intergenic 15.0%
!! TATTGGTATAATATTATGTA+TGG + chr5_1:52909927-52909946 None:intergenic 15.0%
!!! TAATTAGAGTAATTTCATTT+TGG - chr5_1:52909965-52909984 Msa0736450:intron 15.0%
!!! TTAAAAAAAAGTGTAACATT+AGG + chr5_1:52910045-52910064 None:intergenic 15.0%
!! TTAAAAACACAAAAATGTAT+GGG + chr5_1:52911894-52911913 None:intergenic 15.0%
!!! AGAAAAGATTTAAAATTCAA+AGG + chr5_1:52912210-52912229 None:intergenic 15.0%
!!! GTAAAAACAATTATTTTGTT+AGG + chr5_1:52912242-52912261 None:intergenic 15.0%
!!! TTGTTGCTTATTATCTAAAT+AGG - chr5_1:52907956-52907975 Msa0736450:CDS 20.0%
!! TATCTAAATAGGAAGATTAA+TGG - chr5_1:52907967-52907986 Msa0736450:CDS 20.0%
!! GCTCTATAACTAAATAAATT+TGG + chr5_1:52908326-52908345 None:intergenic 20.0%
!!! CTACAATCAATTTTGATTAT+AGG - chr5_1:52908668-52908687 Msa0736450:intron 20.0%
!! CTTTCAAATAAACTTTCATT+GGG + chr5_1:52908845-52908864 None:intergenic 20.0%
!! ACTTTCAAATAAACTTTCAT+TGG + chr5_1:52908846-52908865 None:intergenic 20.0%
!! AATGAAAGTTTATTTGAAAG+TGG - chr5_1:52908845-52908864 Msa0736450:intron 20.0%
!! ATGAAAGTTTATTTGAAAGT+GGG - chr5_1:52908846-52908865 Msa0736450:intron 20.0%
!!! TAGACACTTTTTTTTTTTTG+AGG - chr5_1:52908959-52908978 Msa0736450:CDS 20.0%
!!! AGACACTTTTTTTTTTTTGA+GGG - chr5_1:52908960-52908979 Msa0736450:CDS 20.0%
!! TGTGATTGATATAGTAAAAA+AGG - chr5_1:52909035-52909054 Msa0736450:intron 20.0%
!! ACTTTATATCCTAACTAATT+TGG - chr5_1:52909197-52909216 Msa0736450:CDS 20.0%
!! TTTGTCAAAAAAAAAGTTGA+AGG + chr5_1:52909837-52909856 None:intergenic 20.0%
!!! GATTACATTTCTATTTTGTT+TGG + chr5_1:52910017-52910036 None:intergenic 20.0%
!! AAATTATTTGATGCAAATGA+AGG - chr5_1:52910334-52910353 Msa0736450:CDS 20.0%
!! ACTTCTTCATTTACTAATTA+TGG - chr5_1:52910473-52910492 Msa0736450:CDS 20.0%
!! AAAAAAACAATCATCCAATT+GGG - chr5_1:52911156-52911175 Msa0736450:CDS 20.0%
!! AATTCAAGTATTATATGCAA+AGG + chr5_1:52911191-52911210 None:intergenic 20.0%
!!! AATACTTGAATTTATTTTGC+AGG - chr5_1:52911199-52911218 Msa0736450:CDS 20.0%
!! AAAGTAAAATCATCTTCATA+AGG + chr5_1:52911446-52911465 None:intergenic 20.0%
!!! ATAGTATTTTTTTTTTTCGG+TGG - chr5_1:52911655-52911674 Msa0736450:intron 20.0%
!! GTTAAAAACACAAAAATGTA+TGG + chr5_1:52911895-52911914 None:intergenic 20.0%
!!! TCCATATGATCATTTTTATA+AGG - chr5_1:52911932-52911951 Msa0736450:intron 20.0%
!!! CCATATGATCATTTTTATAA+GGG - chr5_1:52911933-52911952 Msa0736450:intron 20.0%
!! AGTAATAGTACTCTATTAAA+TGG + chr5_1:52912164-52912183 None:intergenic 20.0%
!! TACTATTACTTTATTGATCA+TGG - chr5_1:52912174-52912193 Msa0736450:intron 20.0%
! CCATAATATGAATTATAGCA+AGG + chr5_1:52908471-52908490 None:intergenic 25.0%
!! CCTTGCTATAATTCATATTA+TGG - chr5_1:52908468-52908487 Msa0736450:CDS 25.0%
! GCTATAATTCATATTATGGA+AGG - chr5_1:52908472-52908491 Msa0736450:CDS 25.0%
!! CATACAGTACAAGAAATTTT+TGG + chr5_1:52908698-52908717 None:intergenic 25.0%
!!! CAAATATATGCCTACTTTTT+TGG - chr5_1:52908929-52908948 Msa0736450:intron 25.0%
!!! GACACTTTTTTTTTTTTGAG+GGG - chr5_1:52908961-52908980 Msa0736450:CDS 25.0%
!!! ACACTTTTTTTTTTTTGAGG+GGG - chr5_1:52908962-52908981 Msa0736450:CDS 25.0%
! ATAATCTTGATTACCACAAT+AGG + chr5_1:52909103-52909122 None:intergenic 25.0%
!! TAAAGTGTCAATATTTGCAT+GGG + chr5_1:52909183-52909202 None:intergenic 25.0%
!! ATAAAGTGTCAATATTTGCA+TGG + chr5_1:52909184-52909203 None:intergenic 25.0%
! TTATATCCTAACTAATTTGG+CGG - chr5_1:52909200-52909219 Msa0736450:CDS 25.0%
!!! GATTACTGTTTTTGACAATA+TGG - chr5_1:52909288-52909307 Msa0736450:CDS 25.0%
!! TTTTGTCTTCTTATAATTCC+AGG - chr5_1:52909459-52909478 Msa0736450:CDS 25.0%
! TTTGTCTTCTTATAATTCCA+GGG - chr5_1:52909460-52909479 Msa0736450:CDS 25.0%
! AAAGTGAGAAAAAGAAAGAA+GGG + chr5_1:52909766-52909785 None:intergenic 25.0%
! AAAAGTGAGAAAAAGAAAGA+AGG + chr5_1:52909767-52909786 None:intergenic 25.0%
! AAAAAGTTGAAGGATTCTAA+AGG + chr5_1:52909827-52909846 None:intergenic 25.0%
! TGTAGTCTAAGTATAAAACT+CGG + chr5_1:52909883-52909902 None:intergenic 25.0%
!!! CATTTTAGCTAGAAGAATAT+TGG + chr5_1:52909944-52909963 None:intergenic 25.0%
! ACACATCAAAATGTAGAAAT+TGG + chr5_1:52910115-52910134 None:intergenic 25.0%
! TAGTTGGAAGACTAAATAAT+GGG + chr5_1:52910454-52910473 None:intergenic 25.0%
! TTAGTAAATGAAGAAGTAGT+TGG + chr5_1:52910470-52910489 None:intergenic 25.0%
! TCAAATTAAATTTGTGTGCA+TGG + chr5_1:52910539-52910558 None:intergenic 25.0%
!!! TTACTTTTACCAACTTACAT+AGG - chr5_1:52910877-52910896 Msa0736450:intron 25.0%
!! TACTTTTACCAACTTACATA+GGG - chr5_1:52910878-52910897 Msa0736450:intron 25.0%
!! AAATTAGACTTTTTGAACCT+TGG - chr5_1:52911107-52911126 Msa0736450:CDS 25.0%
!!! ATATTTTAGTGTCTAAGCTT+GGG + chr5_1:52911135-52911154 None:intergenic 25.0%
! GAAAAAAACAATCATCCAAT+TGG - chr5_1:52911155-52911174 Msa0736450:CDS 25.0%
!! ATAATTTTCATTGTCATCCA+AGG + chr5_1:52911420-52911439 None:intergenic 25.0%
!! TGAAGATGATTTTACTTTCA+TGG - chr5_1:52911448-52911467 Msa0736450:intron 25.0%
! AATTCTCCAATTTGTATAGA+TGG - chr5_1:52911781-52911800 Msa0736450:intron 25.0%
! CCCTTATAAAAATGATCATA+TGG + chr5_1:52911936-52911955 None:intergenic 25.0%
! TCAACTTTGTAGAAAAAAAG+AGG - chr5_1:52912083-52912102 Msa0736450:intron 25.0%
!!! AATGAGTAATATATCGACTT+TGG - chr5_1:52912116-52912135 Msa0736450:intron 25.0%
!!! CAATTATTTTGTTAGGTACT+GGG + chr5_1:52912235-52912254 None:intergenic 25.0%
!!! ACAATTATTTTGTTAGGTAC+TGG + chr5_1:52912236-52912255 None:intergenic 25.0%
! TCTTCTATAAAATTCTCGTT+GGG + chr5_1:52912357-52912376 None:intergenic 25.0%
! ATCTTCTATAAAATTCTCGT+TGG + chr5_1:52912358-52912377 None:intergenic 25.0%
!! AACGAGAATTTTATAGAAGA+TGG - chr5_1:52912357-52912376 Msa0736450:intron 25.0%
!! TCTATAGAGTGTTTATTGTT+TGG + chr5_1:52912540-52912559 None:intergenic 25.0%
!!! AACTTGCTATTTTCTTTGAT+GGG + chr5_1:52912656-52912675 None:intergenic 25.0%
!!! AAACTTGCTATTTTCTTTGA+TGG + chr5_1:52912657-52912676 None:intergenic 25.0%
! ATCAAAGAAAATAGCAAGTT+TGG - chr5_1:52912656-52912675 Msa0736450:intron 25.0%
!!! TCTTTCATCTTTTTTGGTTT+TGG + chr5_1:52912750-52912769 None:intergenic 25.0%
!! CTTTTCTCTTTCATCTTTTT+TGG + chr5_1:52912756-52912775 None:intergenic 25.0%
!! CATTTTCTTCACCATATTTT+TGG - chr5_1:52912881-52912900 Msa0736450:CDS 25.0%
TAATGGCCATAAGATTGAAT+TGG - chr5_1:52907984-52908003 Msa0736450:CDS 30.0%
TGATCTCCAATTCAATCTTA+TGG + chr5_1:52907993-52908012 None:intergenic 30.0%
! CGTGTTCAGTTTACAAATTT+TGG - chr5_1:52908105-52908124 Msa0736450:CDS 30.0%
GCTATAGTTCATATCATAGA+AGG - chr5_1:52908512-52908531 Msa0736450:CDS 30.0%
CTATACTTGACCAAAAAAGT+AGG + chr5_1:52908942-52908961 None:intergenic 30.0%
!!! TTTTTTTTTTTTGAGGGGGA+CGG - chr5_1:52908966-52908985 Msa0736450:CDS 30.0%
!!! TAGTTTACGCTTTTTGACTT+AGG + chr5_1:52909145-52909164 None:intergenic 30.0%
TATATCCTAACTAATTTGGC+GGG - chr5_1:52909201-52909220 Msa0736450:CDS 30.0%
ATTATTACCTGGGAATGATA+TGG - chr5_1:52909488-52909507 Msa0736450:CDS 30.0%
AAGTGAGAAAAAGAAAGAAG+GGG + chr5_1:52909765-52909784 None:intergenic 30.0%
! AAAAGTGTAACATTAGGCTA+GGG + chr5_1:52910039-52910058 None:intergenic 30.0%
! AAAAAGTGTAACATTAGGCT+AGG + chr5_1:52910040-52910059 None:intergenic 30.0%
TGAAAAATAATCACAACCTC+AGG - chr5_1:52910148-52910167 Msa0736450:intron 30.0%
GGACAATATGGTAATATTAC+AGG - chr5_1:52910230-52910249 Msa0736450:intron 30.0%
GTAGTTGGAAGACTAAATAA+TGG + chr5_1:52910455-52910474 None:intergenic 30.0%
TGTATAGCTTCTTGAAATTG+CGG - chr5_1:52910641-52910660 Msa0736450:CDS 30.0%
ACTTCTCTTAAGCATTTGTT+TGG + chr5_1:52910711-52910730 None:intergenic 30.0%
! AAGTGTGAAATTGTGTGTTT+TGG + chr5_1:52910765-52910784 None:intergenic 30.0%
TGATCTCACTATCTTATCTT+AGG + chr5_1:52911045-52911064 None:intergenic 30.0%
AGATAAGATAGTGAGATCAA+AGG - chr5_1:52911046-52911065 Msa0736450:intron 30.0%
GATAAGATAGTGAGATCAAA+GGG - chr5_1:52911047-52911066 Msa0736450:intron 30.0%
!!! TATTTTAGTGTCTAAGCTTG+GGG + chr5_1:52911134-52911153 None:intergenic 30.0%
!!! CATATTTTAGTGTCTAAGCT+TGG + chr5_1:52911136-52911155 None:intergenic 30.0%
!!! ACTTGAATTTATTTTGCAGG+TGG - chr5_1:52911202-52911221 Msa0736450:CDS 30.0%
AATTGCAAATGATATCTTGC+AGG - chr5_1:52911334-52911353 Msa0736450:intron 30.0%
ATTGCAAATGATATCTTGCA+GGG - chr5_1:52911335-52911354 Msa0736450:intron 30.0%
AACACAAGATCTATAGAGAT+AGG - chr5_1:52911542-52911561 Msa0736450:intron 30.0%
! ACCTTTTCAAAATCTTCTCT+TGG + chr5_1:52911632-52911651 None:intergenic 30.0%
GTTCTTCCATCTATACAAAT+TGG + chr5_1:52911790-52911809 None:intergenic 30.0%
AGGACAAGAGAAAAAAGAAA+AGG - chr5_1:52912044-52912063 Msa0736450:intron 30.0%
!! AATGGATTGTTGAGACAAAT+TGG + chr5_1:52912146-52912165 None:intergenic 30.0%
! ATTTAAAATTCAAAGGACCG+AGG + chr5_1:52912203-52912222 None:intergenic 30.0%
!!! CATCATTGTCATTTTGTTCA+AGG + chr5_1:52912296-52912315 None:intergenic 30.0%
ATGATGTCAATGAATTCTCA+TGG - chr5_1:52912310-52912329 Msa0736450:intron 30.0%
TGATGTCAATGAATTCTCAT+GGG - chr5_1:52912311-52912330 Msa0736450:intron 30.0%
CTTCTATAAAATTCTCGTTG+GGG + chr5_1:52912356-52912375 None:intergenic 30.0%
! TTTTATAGAAGATGGTAGCA+TGG - chr5_1:52912365-52912384 Msa0736450:intron 30.0%
! AAAGGTTAGTCATAGAATGT+TGG - chr5_1:52912431-52912450 Msa0736450:intron 30.0%
! AACTTGGTGAAATAATGTCA+TGG + chr5_1:52912475-52912494 None:intergenic 30.0%
! TGAATTTGAAGTGTTTGTGA+AGG + chr5_1:52912501-52912520 None:intergenic 30.0%
TGTTTATTGTTTGGCATCAT+TGG + chr5_1:52912531-52912550 None:intergenic 30.0%
AGATGCAAAGATGATGATAA+TGG - chr5_1:52912566-52912585 Msa0736450:intron 30.0%
!! AAGATGATGATAATGGAGAA+TGG - chr5_1:52912573-52912592 Msa0736450:intron 30.0%
ATCTTTCTTCATGAAGTTCA+AGG - chr5_1:52912599-52912618 Msa0736450:intron 30.0%
!!! TTTTCTTTGATGGGTTGAAT+AGG + chr5_1:52912647-52912666 None:intergenic 30.0%
TTTGATGCATCGTGTTTATT+TGG - chr5_1:52912701-52912720 Msa0736450:intron 30.0%
GATTAGTGTGTGAAATTACC+TGG + chr5_1:52908057-52908076 None:intergenic 35.0%
! ATGATTTTGTAGACCTTAGC+AGG - chr5_1:52908817-52908836 Msa0736450:intron 35.0%
! TGATTTTGTAGACCTTAGCA+GGG - chr5_1:52908818-52908837 Msa0736450:intron 35.0%
! GATTGTACTTCTAGAGAAGA+TGG - chr5_1:52909057-52909076 Msa0736450:intron 35.0%
ATAGGATTCCTAAAGGTGAA+GGG + chr5_1:52909085-52909104 None:intergenic 35.0%
AATAGGATTCCTAAAGGTGA+AGG + chr5_1:52909086-52909105 None:intergenic 35.0%
TACCACAATAGGATTCCTAA+AGG + chr5_1:52909092-52909111 None:intergenic 35.0%
CAGGGAAATCATTATTACCT+GGG - chr5_1:52909478-52909497 Msa0736450:CDS 35.0%
AAAACCCTAGTTTACTATCG+AGG - chr5_1:52909648-52909667 Msa0736450:intron 35.0%
TCTTCCTCGATAGTAAACTA+GGG + chr5_1:52909655-52909674 None:intergenic 35.0%
ATGAATATCGTCTTGATGAG+AGG - chr5_1:52909709-52909728 Msa0736450:intron 35.0%
TGAATATCGTCTTGATGAGA+GGG - chr5_1:52909710-52909729 Msa0736450:intron 35.0%
GTCTAAGTATAAAACTCGGT+TGG + chr5_1:52909879-52909898 None:intergenic 35.0%
!! TTGATTGGTCACTTGTTATC+TGG + chr5_1:52910265-52910284 None:intergenic 35.0%
! ATAGCTCAACGTTTGTTGAT+TGG + chr5_1:52910280-52910299 None:intergenic 35.0%
! TTGAGCTATACTCTGAAAGA+AGG - chr5_1:52910291-52910310 Msa0736450:intron 35.0%
! TGAGCTATACTCTGAAAGAA+GGG - chr5_1:52910292-52910311 Msa0736450:intron 35.0%
GAGACTTCTCTCAATATCAA+TGG - chr5_1:52910383-52910402 Msa0736450:CDS 35.0%
TCAATATCAATGGTACGACA+AGG - chr5_1:52910393-52910412 Msa0736450:CDS 35.0%
CAATATCAATGGTACGACAA+GGG - chr5_1:52910394-52910413 Msa0736450:CDS 35.0%
!! GTATTTTTGTGTACCTTGGA+TGG + chr5_1:52910515-52910534 None:intergenic 35.0%
!! TGGAGTATTTTTGTGTACCT+TGG + chr5_1:52910519-52910538 None:intergenic 35.0%
! TAATGTCTAGAGTTGAACCT+AGG - chr5_1:52910832-52910851 Msa0736450:intron 35.0%
GTATGTTTCCCTATGTAAGT+TGG + chr5_1:52910889-52910908 None:intergenic 35.0%
AAAGGTTCAAAAAGCCCAAT+TGG + chr5_1:52911173-52911192 None:intergenic 35.0%
TTCACTTAATCATGCTTCTC+AGG - chr5_1:52911364-52911383 Msa0736450:intron 35.0%
TCACTTAATCATGCTTCTCA+GGG - chr5_1:52911365-52911384 Msa0736450:intron 35.0%
ATCCAAGGCTTGTAAATAAC+TGG + chr5_1:52911405-52911424 None:intergenic 35.0%
ATGAATGATATGAGCTCCAT+GGG - chr5_1:52911491-52911510 Msa0736450:intron 35.0%
!! AGTTTTGTCAACATATCCCA+TGG + chr5_1:52911510-52911529 None:intergenic 35.0%
TGGGATATGTTGACAAAACT+TGG - chr5_1:52911510-52911529 Msa0736450:intron 35.0%
GGGATATGTTGACAAAACTT+GGG - chr5_1:52911511-52911530 Msa0736450:intron 35.0%
TATAGAGATAGGTGATCTAG+AGG - chr5_1:52911553-52911572 Msa0736450:intron 35.0%
! GTAGAGAATTTGAGATGGAT+TGG - chr5_1:52911602-52911621 Msa0736450:intron 35.0%
!! GCCAAGAGAAGATTTTGAAA+AGG - chr5_1:52911628-52911647 Msa0736450:intron 35.0%
ATTGTGTTCCCTTGATGTTT+GGG + chr5_1:52911846-52911865 None:intergenic 35.0%
TTTATTGATCATGGTGACCT+CGG - chr5_1:52912183-52912202 Msa0736450:intron 35.0%
GATGTCAATGAATTCTCATG+GGG - chr5_1:52912312-52912331 Msa0736450:intron 35.0%
TGAGATCACTGAGGAAATAA+AGG - chr5_1:52912413-52912432 Msa0736450:intron 35.0%
!! ATGATGATAATGGAGAATGG+AGG - chr5_1:52912576-52912595 Msa0736450:intron 35.0%
AATCACATGAGAGAGTCAAA+TGG - chr5_1:52912784-52912803 Msa0736450:CDS 35.0%
CAAATGGAATGAGTCAAAAG+TGG - chr5_1:52912800-52912819 Msa0736450:CDS 35.0%
!! TCAAAAGTGGTTTGGTTTGT+TGG - chr5_1:52912813-52912832 Msa0736450:CDS 35.0%
GTTGGTGTAAAATGTGAGAA+AGG - chr5_1:52912831-52912850 Msa0736450:CDS 35.0%
ATGTGAGAAAGGATTAAGTG+TGG - chr5_1:52912842-52912861 Msa0736450:CDS 35.0%
CAACAAGTTCTTCATCCGTA+GGG + chr5_1:52907942-52907961 None:intergenic 40.0%
ATCTCTATAAGTGTGAACCG+TGG - chr5_1:52908025-52908044 Msa0736450:CDS 40.0%
TCTCTATAAGTGTGAACCGT+GGG - chr5_1:52908026-52908045 Msa0736450:CDS 40.0%
TAGGATTCCTAAAGGTGAAG+GGG + chr5_1:52909084-52909103 None:intergenic 40.0%
! CACCTTTAGGAATCCTATTG+TGG - chr5_1:52909087-52909106 Msa0736450:intron 40.0%
TGTCAATATTTGCATGGGAG+TGG + chr5_1:52909178-52909197 None:intergenic 40.0%
GTTTACCCGCCAAATTAGTT+AGG + chr5_1:52909209-52909228 None:intergenic 40.0%
! ACTAATTTGGCGGGTAAACA+TGG - chr5_1:52909210-52909229 Msa0736450:CDS 40.0%
! CTAATTTGGCGGGTAAACAT+GGG - chr5_1:52909211-52909230 Msa0736450:CDS 40.0%
CCAGGTAATAATGATTTCCC+TGG + chr5_1:52909480-52909499 None:intergenic 40.0%
CCAGGGAAATCATTATTACC+TGG - chr5_1:52909477-52909496 Msa0736450:CDS 40.0%
ATTTCTTTAGCCCTCGTGAT+AGG - chr5_1:52909517-52909536 Msa0736450:CDS 40.0%
! GATTCGTTCTAGATCCATTC+GGG + chr5_1:52909548-52909567 None:intergenic 40.0%
! CGATTCGTTCTAGATCCATT+CGG + chr5_1:52909549-52909568 None:intergenic 40.0%
!! AACCAAATCTGGGTATTGGA+AGG - chr5_1:52909572-52909591 Msa0736450:CDS 40.0%
!! ATTCACTTTTCGATCCTTCC+CGG + chr5_1:52909601-52909620 None:intergenic 40.0%
CTCTTCCTCGATAGTAAACT+AGG + chr5_1:52909656-52909675 None:intergenic 40.0%
CTGTACTCTTCTTGATCACA+CGG + chr5_1:52910190-52910209 None:intergenic 40.0%
ACAGTGATTGTGCCAAAAGT+TGG - chr5_1:52910206-52910225 Msa0736450:intron 40.0%
! CCATATTGTCCTCCAACTTT+TGG + chr5_1:52910221-52910240 None:intergenic 40.0%
CCAAAAGTTGGAGGACAATA+TGG - chr5_1:52910218-52910237 Msa0736450:intron 40.0%
!! CACTTGTTATCTGGTTTGCA+TGG + chr5_1:52910256-52910275 None:intergenic 40.0%
! GAGCTATACTCTGAAAGAAG+GGG - chr5_1:52910293-52910312 Msa0736450:intron 40.0%
GTCTCATGTACCATATTGTG+AGG + chr5_1:52910368-52910387 None:intergenic 40.0%
GACAAGGGATCATGGAAATT+GGG - chr5_1:52910409-52910428 Msa0736450:CDS 40.0%
! TTTTGTGTACCTTGGATGGA+GGG + chr5_1:52910511-52910530 None:intergenic 40.0%
! TTTTTGTGTACCTTGGATGG+AGG + chr5_1:52910512-52910531 None:intergenic 40.0%
TACGTGTTTGTTCTCACGTT+TGG - chr5_1:52910588-52910607 Msa0736450:CDS 40.0%
TGTTTGTTCTCACGTTTGGT+TGG - chr5_1:52910592-52910611 Msa0736450:CDS 40.0%
GTTTGTTCTCACGTTTGGTT+GGG - chr5_1:52910593-52910612 Msa0736450:CDS 40.0%
AGTTGAACCTAGGACAAGTT+GGG - chr5_1:52910842-52910861 Msa0736450:intron 40.0%
! ATGGCCAAAGCTAAGGTTTT+AGG + chr5_1:52910990-52911009 None:intergenic 40.0%
!! AAACCTTAGCTTTGGCCATT+TGG - chr5_1:52910991-52911010 Msa0736450:intron 40.0%
ATATTGCACTAGAGTGTGCA+AGG - chr5_1:52911225-52911244 Msa0736450:CDS 40.0%
TAGGTTTACTATGCCTCCAT+TGG - chr5_1:52911256-52911275 Msa0736450:CDS 40.0%
! ACATGAGGTATTCCAACTTG+AGG + chr5_1:52911296-52911315 None:intergenic 40.0%
ATACCTCATGTGACACAACA+AGG - chr5_1:52911305-52911324 Msa0736450:CDS 40.0%
GTCCAGTTATTTACAAGCCT+TGG - chr5_1:52911400-52911419 Msa0736450:intron 40.0%
CATGAATGATATGAGCTCCA+TGG - chr5_1:52911490-52911509 Msa0736450:intron 40.0%
TCTAGAGGATCAAGAGTCAA+AGG - chr5_1:52911568-52911587 Msa0736450:intron 40.0%
ATCAAGAGTCAAAGGCCAAA+CGG - chr5_1:52911576-52911595 Msa0736450:intron 40.0%
CAAATTCTCTACCATCCGTT+TGG + chr5_1:52911594-52911613 None:intergenic 40.0%
GGATGGTAGAGAATTTGAGA+TGG - chr5_1:52911597-52911616 Msa0736450:intron 40.0%
ACAAAATGTTGTCCCAATCG+AGG - chr5_1:52911808-52911827 Msa0736450:intron 40.0%
AGCATGAAATCTCCTCGATT+GGG + chr5_1:52911823-52911842 None:intergenic 40.0%
TTTCATGCTCCCAAACATCA+AGG - chr5_1:52911834-52911853 Msa0736450:intron 40.0%
TTCATGCTCCCAAACATCAA+GGG - chr5_1:52911835-52911854 Msa0736450:intron 40.0%
CATTGTGTTCCCTTGATGTT+TGG + chr5_1:52911847-52911866 None:intergenic 40.0%
CAAACATCAAGGGAACACAA+TGG - chr5_1:52911845-52911864 Msa0736450:intron 40.0%
TACTTTCGTCAGAATACGAG+CGG - chr5_1:52912259-52912278 Msa0736450:intron 40.0%
TCATGGGGATTCATCAATGA+TGG - chr5_1:52912327-52912346 Msa0736450:intron 40.0%
GTGTTTGTGAAGGAACAACT+TGG + chr5_1:52912491-52912510 None:intergenic 40.0%
AAGTTCAAGGCCTATGTGAT+GGG - chr5_1:52912612-52912631 Msa0736450:intron 40.0%
GATGCATCGTGTTTATTTGG+AGG - chr5_1:52912704-52912723 Msa0736450:intron 40.0%
GGAATGAGTCAAAAGTGGTT+TGG - chr5_1:52912805-52912824 Msa0736450:CDS 40.0%
! AGGATTAAGTGTGGTCTTGA+AGG - chr5_1:52912851-52912870 Msa0736450:CDS 40.0%
! AGTGTGGTCTTGAAGGAAAT+AGG - chr5_1:52912858-52912877 Msa0736450:CDS 40.0%
! GGTACAAAGCGCCAAAAATA+TGG + chr5_1:52912895-52912914 None:intergenic 40.0%
AAACCTGGAGGCAATGAAAC+AGG + chr5_1:52907910-52907929 None:intergenic 45.0%
TTTCATTGCCTCCAGGTTTC+AGG - chr5_1:52907911-52907930 Msa0736450:CDS 45.0%
GCAACAAGTTCTTCATCCGT+AGG + chr5_1:52907943-52907962 None:intergenic 45.0%
AAATTACCTGGCAAGTCCCA+CGG + chr5_1:52908045-52908064 None:intergenic 45.0%
TACCTGGGAATGATATGGAG+TGG - chr5_1:52909493-52909512 Msa0736450:CDS 45.0%
TACCACTCCATATCATTCCC+AGG + chr5_1:52909498-52909517 None:intergenic 45.0%
ACGAATCGTGCAACCAAATC+TGG - chr5_1:52909561-52909580 Msa0736450:CDS 45.0%
CGAATCGTGCAACCAAATCT+GGG - chr5_1:52909562-52909581 Msa0736450:CDS 45.0%
GTGCAACCAAATCTGGGTAT+TGG - chr5_1:52909568-52909587 Msa0736450:CDS 45.0%
TGCCTTCCAATACCCAGATT+TGG + chr5_1:52909577-52909596 None:intergenic 45.0%
AATTCTCAAGCTCGAGCAGT+AGG - chr5_1:52909618-52909637 Msa0736450:intron 45.0%
ATTCTCAAGCTCGAGCAGTA+GGG - chr5_1:52909619-52909638 Msa0736450:intron 45.0%
CAATTTGTACGAGAGCCATG+GGG + chr5_1:52909681-52909700 None:intergenic 45.0%
CCAATTTGTACGAGAGCCAT+GGG + chr5_1:52909682-52909701 None:intergenic 45.0%
CCATGGCTCTCGTACAAATT+GGG - chr5_1:52909680-52909699 Msa0736450:intron 45.0%
! AAACTCGGTTGGTCAGTTGA+AGG + chr5_1:52909868-52909887 None:intergenic 45.0%
! CAAAGAGCATATGCATCCTG+AGG + chr5_1:52910167-52910186 None:intergenic 45.0%
GTGATTGTGCCAAAAGTTGG+AGG - chr5_1:52910209-52910228 Msa0736450:intron 45.0%
AATGGTACGACAAGGGATCA+TGG - chr5_1:52910401-52910420 Msa0736450:CDS 45.0%
CGACAAGGGATCATGGAAAT+TGG - chr5_1:52910408-52910427 Msa0736450:CDS 45.0%
! CTTGGATGGAGGGTATGTTA+TGG + chr5_1:52910501-52910520 None:intergenic 45.0%
CATAACATACCCTCCATCCA+AGG - chr5_1:52910499-52910518 Msa0736450:CDS 45.0%
ACATTCAAGCTTCTTGCGTG+CGG + chr5_1:52910624-52910643 None:intergenic 45.0%
AATTGCGGTGAAAACTGCCT+TGG - chr5_1:52910656-52910675 Msa0736450:intron 45.0%
ATTGCGGTGAAAACTGCCTT+GGG - chr5_1:52910657-52910676 Msa0736450:intron 45.0%
TATGCAATTATCGCGTCCCA+AGG + chr5_1:52910676-52910695 None:intergenic 45.0%
TGGGACGCGATAATTGCATA+TGG - chr5_1:52910676-52910695 Msa0736450:intron 45.0%
GGGACGCGATAATTGCATAT+GGG - chr5_1:52910677-52910696 Msa0736450:intron 45.0%
GAGTTGAACCTAGGACAAGT+TGG - chr5_1:52910841-52910860 Msa0736450:intron 45.0%
GTTGAACCTAGGACAAGTTG+GGG - chr5_1:52910843-52910862 Msa0736450:intron 45.0%
GAGGCCTAAAACCTTAGCTT+TGG - chr5_1:52910983-52911002 Msa0736450:intron 45.0%
TCTTAGGCGAGACTTATGCA+CGG + chr5_1:52911029-52911048 None:intergenic 45.0%
AGTGTGCAAGGATGCAACAT+AGG - chr5_1:52911237-52911256 Msa0736450:CDS 45.0%
GTTTACTATGCCTCCATTGG+AGG - chr5_1:52911259-52911278 Msa0736450:CDS 45.0%
GTGGAGGAATTTCCTCAAGT+TGG - chr5_1:52911281-52911300 Msa0736450:CDS 45.0%
! CTTCCTTGTTGTGTCACATG+AGG + chr5_1:52911311-52911330 None:intergenic 45.0%
GAGCATGAAATCTCCTCGAT+TGG + chr5_1:52911824-52911843 None:intergenic 45.0%
!! TCCAAGCTTTGAGATCACTG+AGG - chr5_1:52912404-52912423 Msa0736450:intron 45.0%
TCCTCAGTGATCTCAAAGCT+TGG + chr5_1:52912408-52912427 None:intergenic 45.0%
GAAGTTCAAGGCCTATGTGA+TGG - chr5_1:52912611-52912630 Msa0736450:intron 45.0%
AGTTCAAGGCCTATGTGATG+GGG - chr5_1:52912613-52912632 Msa0736450:intron 45.0%
GTTCCATTTCCCCATCACAT+AGG + chr5_1:52912625-52912644 None:intergenic 45.0%
! TTTTGGCGCTTTGTACCACA+TGG - chr5_1:52912898-52912917 Msa0736450:CDS 45.0%
TTTGGCGCTTTGTACCACAT+GGG - chr5_1:52912899-52912918 Msa0736450:CDS 45.0%
!! AAAAAAAAACTAAATAAATT+TGG + chr5_1:52908292-52908311 None:intergenic 5.0%
!!! CAAAATTTTATATAAAAAAA+AGG + chr5_1:52910964-52910983 None:intergenic 5.0%
!!! TTTTTTTATATAAAATTTTG+AGG - chr5_1:52910964-52910983 Msa0736450:intron 5.0%
!!! ATAATAGTATTTTTTTTTTT+CGG - chr5_1:52911652-52911671 Msa0736450:intron 5.0%
!! AGGTTTCAGGTTCCACCCTA+CGG - chr5_1:52907924-52907943 Msa0736450:CDS 50.0%
CAAGTTCTTCATCCGTAGGG+TGG + chr5_1:52907939-52907958 None:intergenic 50.0%
CTTTCATTGGGTCCCTGCTA+AGG + chr5_1:52908833-52908852 None:intergenic 50.0%
AGATGGTCCCCTTCACCTTT+AGG - chr5_1:52909074-52909093 Msa0736450:intron 50.0%
TCGGGTACTTCCTATCACGA+GGG + chr5_1:52909530-52909549 None:intergenic 50.0%
TTCGGGTACTTCCTATCACG+AGG + chr5_1:52909531-52909550 None:intergenic 50.0%
!! CGTGATAGGAAGTACCCGAA+TGG - chr5_1:52909531-52909550 Msa0736450:CDS 50.0%
!! TCTGGGTATTGGAAGGCAAC+CGG - chr5_1:52909579-52909598 Msa0736450:CDS 50.0%
TTCTCAAGCTCGAGCAGTAG+GGG - chr5_1:52909620-52909639 Msa0736450:intron 50.0%
CCCATGGCTCTCGTACAAAT+TGG - chr5_1:52909679-52909698 Msa0736450:intron 50.0%
CCCAATTTGTACGAGAGCCA+TGG + chr5_1:52909683-52909702 None:intergenic 50.0%
! TGAAACCACTCCTAGCTTGC+AGG - chr5_1:52909737-52909756 Msa0736450:intron 50.0%
! GGCTTGCTCACCTCACAATA+TGG - chr5_1:52910355-52910374 Msa0736450:CDS 50.0%
TCATCACCCCAACTTGTCCT+AGG + chr5_1:52910852-52910871 None:intergenic 50.0%
! TAGGACAAGTTGGGGTGATG+AGG - chr5_1:52910851-52910870 Msa0736450:intron 50.0%
GGACCAAATGGCCAAAGCTA+AGG + chr5_1:52910997-52911016 None:intergenic 50.0%
TACTATGCCTCCATTGGAGG+TGG - chr5_1:52911262-52911281 Msa0736450:CDS 50.0%
AATTCCTCCACCTCCAATGG+AGG + chr5_1:52911272-52911291 None:intergenic 50.0%
GGAAATTCCTCCACCTCCAA+TGG + chr5_1:52911275-52911294 None:intergenic 50.0%
AGAGTCAAAGGCCAAACGGA+TGG - chr5_1:52911580-52911599 Msa0736450:intron 50.0%
AGGGAACACAATGGCATGCA+AGG - chr5_1:52911854-52911873 Msa0736450:intron 50.0%
! AGGCCTATGTGATGGGGAAA+TGG - chr5_1:52912619-52912638 Msa0736450:intron 50.0%
GCACCTGTTTCATTGCCTCC+AGG - chr5_1:52907904-52907923 Msa0736450:CDS 55.0%
GTAGGGTGGAACCTGAAACC+TGG + chr5_1:52907925-52907944 None:intergenic 55.0%
!! CTGGGTATTGGAAGGCAACC+GGG - chr5_1:52909580-52909599 Msa0736450:CDS 55.0%
GTATTGGAAGGCAACCGGGA+AGG - chr5_1:52909584-52909603 Msa0736450:CDS 55.0%
!! TATCGAGGAAGAGCACCCCA+TGG - chr5_1:52909663-52909682 Msa0736450:intron 55.0%
AGAAGGGGAACCTGCAAGCT+AGG + chr5_1:52909750-52909769 None:intergenic 55.0%
TTCTCACGTTTGGTTGGGCG+TGG - chr5_1:52910598-52910617 Msa0736450:CDS 55.0%
ACTTATGCACGGACGGTGCA+AGG + chr5_1:52911018-52911037 None:intergenic 55.0%
AGGCGAGACTTATGCACGGA+CGG + chr5_1:52911025-52911044 None:intergenic 55.0%
GTGTCTAAGCTTGGGGTCCA+AGG + chr5_1:52911127-52911146 None:intergenic 55.0%
TATGCCTCCATTGGAGGTGG+AGG - chr5_1:52911265-52911284 Msa0736450:CDS 55.0%
!! TGTACCACATGGGCTAGCCA+TGG - chr5_1:52912909-52912928 Msa0736450:CDS 55.0%
! TTAGCCATGGCTAGCCCATG+TGG + chr5_1:52912916-52912935 None:intergenic 55.0%
GGGTGGAACCTGAAACCTGG+AGG + chr5_1:52907922-52907941 None:intergenic 60.0%
TGTGAACCGTGGGACTTGCC+AGG - chr5_1:52908036-52908055 Msa0736450:CDS 60.0%
GGGAACCTGCAAGCTAGGAG+TGG + chr5_1:52909745-52909764 None:intergenic 60.0%
CGGACGGTGCAAGGACCAAA+TGG + chr5_1:52911009-52911028 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 52907895 52912935 52907895 ID=Msa0736450;Name=Msa0736450
chr5_1 mRNA 52907895 52912935 52907895 ID=Msa0736450-mRNA-1;Parent=Msa0736450;Name=Msa0736450-mRNA-1;_AED=0.03;_eAED=0.03;_QI=6|1|0.83|1|1|1|6|0|651
chr5_1 exon 52907895 52908559 52907895 ID=Msa0736450-mRNA-1:exon:14868;Parent=Msa0736450-mRNA-1
chr5_1 exon 52908955 52909030 52908955 ID=Msa0736450-mRNA-1:exon:14867;Parent=Msa0736450-mRNA-1
chr5_1 exon 52909181 52909609 52909181 ID=Msa0736450-mRNA-1:exon:14866;Parent=Msa0736450-mRNA-1
chr5_1 exon 52910310 52910660 52910310 ID=Msa0736450-mRNA-1:exon:14865;Parent=Msa0736450-mRNA-1
chr5_1 exon 52911072 52911349 52911072 ID=Msa0736450-mRNA-1:exon:14864;Parent=Msa0736450-mRNA-1
chr5_1 exon 52912773 52912935 52912773 ID=Msa0736450-mRNA-1:exon:14863;Parent=Msa0736450-mRNA-1
chr5_1 five_prime_UTR 52912930 52912935 52912930 ID=Msa0736450-mRNA-1:five_prime_utr;Parent=Msa0736450-mRNA-1
chr5_1 CDS 52912773 52912929 52912773 ID=Msa0736450-mRNA-1:cds;Parent=Msa0736450-mRNA-1
chr5_1 CDS 52911072 52911349 52911072 ID=Msa0736450-mRNA-1:cds;Parent=Msa0736450-mRNA-1
chr5_1 CDS 52910310 52910660 52910310 ID=Msa0736450-mRNA-1:cds;Parent=Msa0736450-mRNA-1
chr5_1 CDS 52909181 52909609 52909181 ID=Msa0736450-mRNA-1:cds;Parent=Msa0736450-mRNA-1
chr5_1 CDS 52908955 52909030 52908955 ID=Msa0736450-mRNA-1:cds;Parent=Msa0736450-mRNA-1
chr5_1 CDS 52907895 52908559 52907895 ID=Msa0736450-mRNA-1:cds;Parent=Msa0736450-mRNA-1
Gene Sequence

>Msa0736450

ATGGCACCTGTTTCATTGCCTCCAGGTTTCAGGTTCCACCCTACGGATGAAGAACTTGTTGCTTATTATCTAAATAGGAAGATTAATGGCCATAAGATTGAATTGGAGATCATAGCTGAAGTTGATCTCTATAAGTGTGAACCGTGGGACTTGCCAGGGAAATCATTATTACCTGGGAATGATATGGAGTGGTATTTCTTTAGCCCTCGTGATAGGAAGTACCCGAATGGATCTAGAACGAATCGTGCAACCAAATCTGGGTATTGGAAGGCAACCGGGAAGGATCGAAAAGTGAATTCTCAAGCTCGAGCAGTAGGGGTGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCACCCCATGGCTCTCGTACAAATTGGGTTATGCATGAATATCGTCTTGATGAGAGGGAATGTGAAACCACTCCTAGCTTGCAGGATGCATATGCTCTTTGCCGTGTGATCAAGAAGAGTACAGTGATTGTGCCAAAAGTTGGAGGACAATATGGTAATATTACAGGCCATGCAAACCAGATAACAAGTGACCAATCAACAAACGTTGAGCTATACTCTGAAAGAAGGGGTGAAAATTTAGCTAGTTCAAATTATTTGATGCAAATGAAGGCTTGCTCACCTCACAATATGGTACATGAGACTTCTCTCAATATCAATGGTACGACAAGGGATCATGGAAATTGGGCGCAATTCTCATCTGAAGACCCATTATTTAGTCTTCCAACTACTTCTTCATTTACTAATTATGGAGCCATAACATACCCTCCATCCAAGGTGGATATTGCACTAGAGTGTGCAAGGATGCAACATAGGTTTACTATGCCTCCATTGGAGGTGGAGGAATTTCCTCAAGTTGGAATACCTCATGTGACACAACAAGGAAGCAGAATTGCAAATGATATCTTGCAGGGAATTCTTTCACTTAATCATGCTTCTCAGGGATTGATGAATCAGTCCAGTTATTTACAAGCCTTGGATGACAATGAAAATTATGCTCCTTATGAAGATGATTTTACTTTCATGGTTGACACTAACTACAATCACATGAATGATATGAGCTCCATGGGATATGTTGACAAAACTTGGGAAGATTTGAACACAAGATCTATAGAGATAGGTGATCTAGAGGATCAAGAGTCAAAGGCCAAACGGATGGTAGAGAATTTGAGATGGATTGGAATGCCAAGAGAAGATTTTGAAAAGATGGAAGAACAAAATGTTGTCCCAATCGAGGAGATTTCATGCTCCCAAACATCAAGGGAACACAATGGCATGCAAGAATACGAGCGGCACAATAAGAACCTTGAACAAAATGACAATGATGTCAATGAATTCTCATGGGGATTCATCAATGATGGTGACCCCAACGAGAATTTTATAGAAGATGGTAGCATGGATCATTACTCAAATTCTCCAAGCTTTGAGATCACTGAGGAAATAAAGGTTAGTCATAGAATGTTGGTTTCAACTCAACAAGTAGCCATGACATTATTTCACCAAGTTGTTCCTTCACAAACACTTCAAATTCAACTCAATCCAATGATGCCAAACAATAAACACTCTATAGAGAACGTAGATGCAAAGATGATGATAATGGAGAATGGAGGATCTTTCTTCATGAAGTTCAAGGCCTATGTGATGGGGAAATGGAACCTATTCAACCCATCAAAGAAAATAGCAAGTTTGGTTGTATTTGTATTTGCACTTCTTTTGATGCATCGTGTTTATTTGGAGGAAGAAGTAGAAATCTGCAAACCAAAACCAAAAAAGATGAAAGAGAAAAGAATGAGAGAATCACATGAGAGAGTCAAATGGAATGAGTCAAAAGTGGTTTGGTTTGTTGGTGTAAAATGTGAGAAAGGATTAAGTGTGGTCTTGAAGGAAATAGGCATTTTCTTCACCATATTTTTGGCGCTTTGTACCACATGGGCTAGCCATGGCTAA
Protein sequence

>Msa0736450

MAPVSLPPGFRFHPTDEELVAYYLNRKINGHKIELEIIAEVDLYKCEPWDLPGKSLLPGNDMEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQARAVGVKKTLVYYRGRAPHGSRTNWVMHEYRLDERECETTPSLQDAYALCRVIKKSTVIVPKVGGQYGNITGHANQITSDQSTNVELYSERRGENLASSNYLMQMKACSPHNMVHETSLNINGTTRDHGNWAQFSSEDPLFSLPTTSSFTNYGAITYPPSKVDIALECARMQHRFTMPPLEVEEFPQVGIPHVTQQGSRIANDILQGILSLNHASQGLMNQSSYLQALDDNENYAPYEDDFTFMVDTNYNHMNDMSSMGYVDKTWEDLNTRSIEIGDLEDQESKAKRMVENLRWIGMPREDFEKMEEQNVVPIEEISCSQTSREHNGMQEYERHNKNLEQNDNDVNEFSWGFINDGDPNENFIEDGSMDHYSNSPSFEITEEIKVSHRMLVSTQQVAMTLFHQVVPSQTLQIQLNPMMPNNKHSIENVDAKMMIMENGGSFFMKFKAYVMGKWNLFNPSKKIASLVVFVFALLLMHRVYLEEEVEICKPKPKKMKEKRMRESHERVKWNESKVVWFVGVKCEKGLSVVLKEIGIFFTIFLALCTTWASHG*