AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0855730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0855730 MtrunA17_Chr5g0433781 90.783 651 53 1 1 651 1 644 0.0 1242
Msa0855730 MtrunA17_Chr3g0109821 63.299 673 218 18 1 650 1 667 0.0 805
Msa0855730 MtrunA17_Chr6g0481091 74.375 160 41 0 1 160 1 160 1.28e-85 268
Msa0855730 MtrunA17_Chr2g0309891 74.545 165 41 1 1 164 1 165 2.04e-85 271
Msa0855730 MtrunA17_Chr5g0400461 64.417 163 48 2 1 156 1 160 1.60e-67 224
Msa0855730 MtrunA17_Chr4g0054791 61.635 159 58 1 1 156 1 159 2.11e-64 215
Msa0855730 MtrunA17_Chr1g0201021 61.728 162 61 1 8 169 21 181 1.26e-60 212
Msa0855730 MtrunA17_Chr2g0318081 56.329 158 67 1 1 158 11 166 7.20e-60 204
Msa0855730 MtrunA17_Chr8g0372121 48.352 182 89 3 1 180 1 179 1.15e-58 199
Msa0855730 MtrunA17_Chr8g0359921 57.500 160 64 2 1 158 9 166 1.80e-58 199
Msa0855730 MtrunA17_Chr4g0017921 48.691 191 88 4 5 192 7 190 3.44e-58 199
Msa0855730 MtrunA17_Chr1g0200561 56.494 154 64 2 6 158 19 170 1.78e-57 197
Msa0855730 MtrunA17_Chr5g0428991 61.589 151 58 0 6 156 25 175 4.50e-57 204
Msa0855730 MtrunA17_Chr3g0128111 58.389 149 62 0 9 157 45 193 5.01e-57 193
Msa0855730 MtrunA17_Chr3g0128151 60.131 153 61 0 5 157 21 173 2.18e-56 201
Msa0855730 MtrunA17_Chr3g0124761 57.500 160 62 4 4 160 5 161 9.39e-56 191
Msa0855730 MtrunA17_Chr5g0405211 52.903 155 70 2 6 159 8 160 1.46e-55 192
Msa0855730 MtrunA17_Chr4g0056541 52.500 160 73 2 6 164 7 164 2.25e-55 192
Msa0855730 MtrunA17_Chr3g0130101 53.086 162 75 1 8 169 9 169 5.61e-55 191
Msa0855730 MtrunA17_Chr6g0484441 57.895 152 60 2 6 157 5 152 7.07e-55 190
Msa0855730 MtrunA17_Chr3g0092671 57.669 163 66 3 8 169 7 167 8.70e-55 196
Msa0855730 MtrunA17_Chr4g0018391 48.000 175 88 3 6 179 7 179 9.45e-55 190
Msa0855730 MtrunA17_Chr8g0364791 52.071 169 80 1 1 169 1 168 4.09e-54 191
Msa0855730 MtrunA17_Chr5g0398971 54.902 153 66 3 6 156 7 158 4.26e-54 188
Msa0855730 MtrunA17_Chr1g0197351 57.558 172 66 3 4 169 40 210 5.32e-54 192
Msa0855730 MtrunA17_Chr2g0318101 54.491 167 61 4 6 159 15 179 6.53e-54 188
Msa0855730 MtrunA17_Chr4g0042561 54.088 159 67 2 2 156 5 161 8.42e-54 185
Msa0855730 MtrunA17_Chr2g0309331 52.903 155 69 3 4 156 8 160 1.02e-53 187
Msa0855730 MtrunA17_Chr1g0197361 56.442 163 68 3 8 169 10 170 1.12e-53 193
Msa0855730 MtrunA17_Chr7g0252971 50.877 171 69 3 4 161 6 174 1.23e-53 187
Msa0855730 MtrunA17_Chr8g0384721 47.317 205 86 6 4 189 5 206 3.38e-53 184
Msa0855730 MtrunA17_Chr5g0417791 52.500 160 70 2 4 159 1 158 2.48e-52 181
Msa0855730 MtrunA17_Chr4g0060931 53.165 158 70 3 4 159 15 170 4.09e-52 183
Msa0855730 MtrunA17_Chr7g0214071 56.774 155 58 4 4 156 13 160 4.57e-52 180
Msa0855730 MtrunA17_Chr2g0316971 57.051 156 61 3 6 157 23 176 5.06e-52 184
Msa0855730 MtrunA17_Chr6g0453451 53.416 161 61 3 6 159 20 173 6.44e-52 182
Msa0855730 MtrunA17_Chr3g0130731 52.000 175 71 5 4 168 5 176 1.26e-51 180
Msa0855730 MtrunA17_Chr8g0346001 49.693 163 68 3 6 156 15 175 1.89e-51 184
Msa0855730 MtrunA17_Chr3g0091921 55.195 154 65 3 6 157 16 167 1.93e-51 180
Msa0855730 MtrunA17_Chr1g0147421 55.769 156 62 4 5 157 26 177 2.66e-51 181
Msa0855730 MtrunA17_Chr6g0461661 49.398 166 78 3 3 164 15 178 3.76e-51 181
Msa0855730 MtrunA17_Chr8g0384201 49.112 169 85 1 1 169 1 168 5.50e-51 184
Msa0855730 MtrunA17_Chr3g0139331 54.194 155 65 3 5 157 10 160 6.70e-51 180
Msa0855730 MtrunA17_Chr4g0047841 50.847 177 60 4 6 157 15 189 8.72e-51 179
Msa0855730 MtrunA17_Chr7g0253011 51.534 163 71 4 4 160 15 175 2.66e-50 179
Msa0855730 MtrunA17_Chr2g0326361 53.165 158 66 4 5 156 13 168 1.05e-49 176
Msa0855730 MtrunA17_Chr6g0453131 50.000 162 69 3 6 157 15 174 1.13e-49 177
Msa0855730 MtrunA17_Chr7g0263931 50.314 159 71 4 4 156 9 165 6.14e-49 174
Msa0855730 MtrunA17_Chr4g0076731 52.288 153 68 3 8 159 56 204 2.06e-48 175
Msa0855730 MtrunA17_Chr1g0183741 54.140 157 60 4 4 156 8 156 3.21e-48 170
Msa0855730 MtrunA17_Chr7g0261411 55.556 153 60 4 4 154 8 154 2.41e-47 168
Msa0855730 MtrunA17_Chr2g0312321 50.000 172 78 5 1 168 6 173 2.52e-47 169
Msa0855730 MtrunA17_Chr8g0361731 46.584 161 73 3 8 157 16 174 9.58e-47 170
Msa0855730 MtrunA17_Chr5g0417001 46.250 160 74 3 8 157 16 173 3.86e-46 168
Msa0855730 MtrunA17_Chr7g0217721 55.725 131 56 1 4 134 17 145 5.95e-45 164
Msa0855730 MtrunA17_Chr3g0144271 59.542 131 48 3 6 133 23 151 2.08e-44 164
Msa0855730 MtrunA17_Chr2g0311661 48.193 166 70 4 8 158 23 187 7.18e-44 159
Msa0855730 MtrunA17_Chr2g0311651 48.485 165 69 4 8 157 24 187 9.50e-44 159
Msa0855730 MtrunA17_Chr7g0217711 54.198 131 58 1 4 134 17 145 2.37e-43 154
Msa0855730 MtrunA17_Chr4g0038751 46.154 156 74 4 8 160 17 165 4.15e-42 154
Msa0855730 MtrunA17_Chr8g0345671 51.316 152 65 4 6 154 11 156 1.77e-41 155
Msa0855730 MtrunA17_Chr5g0442771 46.584 161 72 4 8 156 20 178 8.37e-41 151
Msa0855730 MtrunA17_Chr2g0321741 51.880 133 55 4 26 158 12 135 5.78e-40 150
Msa0855730 MtrunA17_Chr8g0385991 42.935 184 87 5 6 181 14 187 4.70e-39 143
Msa0855730 MtrunA17_Chr8g0345711 51.538 130 57 4 6 131 12 139 2.39e-37 137
Msa0855730 MtrunA17_Chr3g0131911 45.342 161 74 3 6 156 14 170 2.44e-37 139
Msa0855730 MtrunA17_Chr8g0345691 46.711 152 72 4 6 154 12 157 4.74e-37 143
Msa0855730 MtrunA17_Chr4g0026141 43.226 155 81 4 6 153 5 159 2.52e-36 137
Msa0855730 MtrunA17_Chr2g0321631 43.226 155 80 4 7 153 5 159 1.75e-35 134
Msa0855730 MtrunA17_Chr8g0345731 43.312 157 75 5 6 156 24 172 2.14e-33 125
Msa0855730 MtrunA17_Chr7g0266701 40.361 166 87 6 6 160 4 168 2.84e-33 128
Msa0855730 MtrunA17_Chr8g0345701 43.448 145 62 5 4 131 5 146 2.84e-30 117
Msa0855730 MtrunA17_Chr3g0113001 41.718 163 75 3 61 220 18 163 4.00e-30 120
Msa0855730 MtrunA17_Chr4g0050701 44.615 130 60 3 6 133 11 130 8.25e-30 116
Msa0855730 MtrunA17_Chr8g0345741 46.610 118 59 3 17 131 2 118 1.47e-29 114
Msa0855730 MtrunA17_Chr8g0345721 39.881 168 62 6 1 131 26 191 2.49e-29 115
Msa0855730 MtrunA17_Chr3g0113031 38.961 154 73 2 71 220 3 139 1.85e-26 109
Msa0855730 MtrunA17_Chr7g0243371 47.664 107 54 2 56 160 12 118 1.50e-25 102
Msa0855730 MtrunA17_Chr8g0384351 33.684 190 99 7 2 191 6 168 3.05e-19 85.9
Msa0855730 MtrunA17_Chr7g0251651 35.659 129 79 3 4 131 16 141 7.02e-19 85.1
Msa0855730 MtrunA17_Chr7g0251661 34.351 131 82 3 2 131 6 133 8.02e-18 81.3
Msa0855730 MtrunA17_Chr3g0130321 32.258 186 92 8 4 170 5 175 8.90e-17 79.7
Msa0855730 MtrunA17_Chr7g0251671 33.071 127 81 3 6 131 10 133 3.34e-15 73.9
Msa0855730 MtrunA17_Chr3g0113011 54.902 51 23 0 4 54 17 67 4.91e-14 67.4
Msa0855730 MtrunA17_Chr3g0113041 50.000 54 27 0 4 57 17 70 1.37e-12 63.5
Msa0855730 MtrunA17_Chr1g0194791 58.696 46 18 1 8 52 48 93 5.94e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0855730 AT1G65910.1 44.776 603 256 19 1 580 1 549 5.09e-149 446
Msa0855730 AT3G03200.1 39.115 565 235 20 1 557 1 464 3.73e-110 340
Msa0855730 AT5G17260.1 40.325 553 218 21 1 545 1 449 8.93e-109 337
Msa0855730 AT3G17730.1 75.000 160 40 0 1 160 1 160 4.26e-87 272
Msa0855730 AT1G54330.1 74.699 166 38 2 1 166 1 162 7.60e-82 261
Msa0855730 AT4G17980.1 63.750 160 54 2 1 156 1 160 5.08e-69 226
Msa0855730 AT4G17980.2 63.750 160 54 2 1 156 1 160 8.84e-69 226
Msa0855730 AT5G46590.1 60.248 161 62 2 1 159 1 161 5.09e-66 219
Msa0855730 AT3G10500.1 60.241 166 65 1 4 169 7 171 3.62e-62 216
Msa0855730 AT5G04410.1 59.639 166 66 1 4 169 7 171 4.89e-62 216
Msa0855730 AT5G46590.2 60.248 161 58 3 1 160 1 156 1.61e-61 206
Msa0855730 AT3G10480.2 59.763 169 67 1 1 169 22 189 1.69e-61 212
Msa0855730 AT1G32510.1 49.774 221 91 6 1 205 1 217 4.20e-61 206
Msa0855730 AT3G10480.1 60.000 170 66 2 1 169 22 190 6.96e-61 210
Msa0855730 AT4G27410.2 56.962 158 66 1 1 158 9 164 8.08e-61 205
Msa0855730 AT3G15500.1 58.228 158 64 1 1 158 9 164 2.12e-60 205
Msa0855730 AT3G10490.1 59.281 167 66 2 4 169 25 190 9.48e-60 200
Msa0855730 AT1G33060.1 59.211 152 62 0 5 156 23 174 5.83e-59 209
Msa0855730 AT1G33060.2 59.211 152 62 0 5 156 23 174 6.74e-59 209
Msa0855730 AT1G34180.3 57.407 162 68 1 8 169 18 178 1.20e-58 204
Msa0855730 AT1G34190.1 57.407 162 68 1 8 169 18 178 1.45e-58 207
Msa0855730 AT5G24590.2 55.901 161 70 1 1 160 8 168 2.57e-58 203
Msa0855730 AT3G10490.2 59.281 167 66 2 4 169 25 190 3.42e-58 203
Msa0855730 AT1G52890.1 50.829 181 84 2 1 181 9 184 3.78e-58 199
Msa0855730 AT4G35580.3 52.198 182 87 0 5 186 8 189 1.06e-57 204
Msa0855730 AT4G35580.1 52.198 182 87 0 5 186 8 189 1.07e-57 203
Msa0855730 AT4G35580.2 52.198 182 87 0 5 186 8 189 1.14e-57 204
Msa0855730 AT1G34180.1 57.407 162 68 1 8 169 18 178 1.17e-57 204
Msa0855730 AT4G27410.3 52.000 175 65 2 1 158 9 181 1.56e-57 197
Msa0855730 AT1G71930.2 44.907 216 116 2 5 219 8 221 5.67e-57 196
Msa0855730 AT1G71930.1 44.907 216 116 2 5 219 8 221 5.67e-57 196
Msa0855730 AT3G18400.1 55.844 154 65 2 6 159 5 155 1.23e-56 194
Msa0855730 AT1G33280.1 54.167 168 67 4 6 170 8 168 1.47e-56 194
Msa0855730 AT2G18060.3 52.229 157 72 2 1 156 4 158 1.13e-55 194
Msa0855730 AT2G18060.1 52.229 157 72 2 1 156 4 158 1.13e-55 194
Msa0855730 AT1G34180.4 53.448 174 68 2 8 169 18 190 1.27e-55 196
Msa0855730 AT3G49530.2 54.430 158 71 1 5 161 12 169 1.31e-55 195
Msa0855730 AT3G10480.3 50.739 203 65 3 1 169 22 223 2.03e-55 197
Msa0855730 AT5G66300.1 52.174 161 75 2 4 163 10 169 3.60e-55 190
Msa0855730 AT3G49530.1 54.430 158 71 1 5 161 12 169 3.85e-55 195
Msa0855730 AT4G10350.1 53.797 158 68 2 6 160 9 164 4.21e-55 191
Msa0855730 AT5G64060.1 51.479 169 81 1 1 169 1 168 5.84e-55 191
Msa0855730 AT3G04070.2 53.939 165 62 4 5 157 9 171 6.57e-55 191
Msa0855730 AT4G36160.1 52.941 153 69 2 5 156 9 159 6.60e-55 192
Msa0855730 AT4G36160.3 52.941 153 69 2 5 156 9 159 6.60e-55 192
Msa0855730 AT4G36160.2 52.941 153 69 2 5 156 13 163 7.02e-55 192
Msa0855730 AT2G24430.2 58.710 155 59 3 5 157 15 166 7.78e-55 190
Msa0855730 AT2G24430.1 58.710 155 59 3 5 157 15 166 7.78e-55 190
Msa0855730 AT1G34180.2 53.448 174 68 2 8 169 18 190 1.07e-54 196
Msa0855730 AT1G12260.2 50.932 161 76 3 6 165 7 165 7.06e-54 188
Msa0855730 AT1G01720.1 57.325 157 60 4 4 156 5 158 1.32e-53 186
Msa0855730 AT1G12260.1 50.932 161 76 3 6 165 7 165 1.64e-53 189
Msa0855730 AT5G39610.1 56.129 155 64 3 4 156 18 170 2.16e-53 185
Msa0855730 AT1G79580.3 54.194 155 66 3 4 156 15 166 3.69e-53 187
Msa0855730 AT1G79580.5 54.194 155 66 3 4 156 15 166 3.69e-53 187
Msa0855730 AT1G79580.4 54.194 155 66 3 4 156 15 166 3.69e-53 187
Msa0855730 AT1G79580.2 54.194 155 66 3 4 156 15 166 3.69e-53 187
Msa0855730 AT1G79580.1 54.194 155 66 3 4 156 15 166 3.69e-53 187
Msa0855730 AT1G62700.1 52.121 165 74 4 6 168 7 168 4.04e-53 187
Msa0855730 AT1G62700.2 52.121 165 74 4 6 168 7 168 4.04e-53 187
Msa0855730 AT1G77450.1 54.938 162 67 4 2 160 6 164 6.40e-53 182
Msa0855730 AT5G53950.1 56.962 158 62 3 6 159 17 172 9.04e-53 186
Msa0855730 AT1G69490.1 55.769 156 63 3 5 156 8 161 1.02e-52 182
Msa0855730 AT5G09330.5 53.254 169 78 1 1 169 1 168 1.40e-52 189
Msa0855730 AT5G09330.2 53.254 169 78 1 1 169 1 168 1.40e-52 189
Msa0855730 AT5G09330.4 53.254 169 78 1 1 169 1 168 1.40e-52 189
Msa0855730 AT5G09330.3 53.254 169 78 1 1 169 1 168 1.40e-52 189
Msa0855730 AT5G09330.1 53.254 169 78 1 1 169 1 168 1.40e-52 189
Msa0855730 AT5G07680.2 55.128 156 66 3 4 157 1 154 1.44e-52 184
Msa0855730 AT3G04070.1 49.171 181 62 4 5 157 9 187 1.47e-52 185
Msa0855730 AT5G07680.1 55.128 156 66 3 4 157 15 168 1.66e-52 184
Msa0855730 AT5G62380.2 52.597 154 66 3 6 156 7 156 3.54e-52 184
Msa0855730 AT5G62380.1 52.597 154 66 3 6 156 7 156 3.54e-52 184
Msa0855730 AT3G29035.1 42.609 230 98 4 4 203 22 247 4.13e-52 182
Msa0855730 AT5G61430.1 54.487 156 67 3 4 157 14 167 5.61e-52 182
Msa0855730 AT3G15170.1 54.088 159 67 3 6 160 20 176 9.53e-52 181
Msa0855730 AT5G18270.2 54.777 157 66 3 4 157 19 173 1.29e-51 182
Msa0855730 AT2G46770.1 44.724 199 89 4 6 185 16 212 1.80e-51 182
Msa0855730 AT5G08790.1 46.078 204 101 4 4 201 5 205 2.13e-51 179
Msa0855730 AT1G32770.1 50.610 164 66 4 6 156 16 177 2.36e-51 182
Msa0855730 AT5G18270.1 54.140 157 67 3 4 157 19 173 4.21e-51 180
Msa0855730 AT1G61110.1 51.163 172 69 4 6 164 16 185 4.25e-51 180
Msa0855730 AT3G12977.1 51.572 159 74 2 1 158 13 169 4.50e-51 178
Msa0855730 AT3G61910.1 47.368 171 70 4 6 159 11 178 5.14e-50 177
Msa0855730 AT2G33480.1 52.288 153 68 1 4 156 13 160 1.27e-49 174
Msa0855730 AT1G56010.2 53.374 163 68 4 1 158 14 173 2.16e-49 175
Msa0855730 AT2G02450.1 52.288 153 68 3 8 159 53 201 2.58e-49 177
Msa0855730 AT2G02450.2 52.288 153 68 3 8 159 53 201 2.73e-49 177
Msa0855730 AT2G33480.2 52.288 153 66 2 4 156 13 158 3.61e-49 173
Msa0855730 AT5G63790.1 52.500 160 68 4 2 156 46 202 4.83e-49 174
Msa0855730 AT1G76420.1 54.839 155 65 3 5 157 21 172 5.33e-49 174
Msa0855730 AT5G63790.2 52.500 160 68 4 2 156 56 212 5.85e-49 174
Msa0855730 AT5G22290.1 50.980 153 68 2 1 153 16 161 9.32e-49 174
Msa0855730 AT3G15510.1 52.761 163 62 4 10 159 21 181 2.84e-48 173
Msa0855730 AT1G32870.2 57.229 166 66 3 6 169 10 172 2.87e-48 177
Msa0855730 AT1G32870.1 57.229 166 66 3 6 169 10 172 4.09e-48 177
Msa0855730 AT1G32870.3 57.229 166 66 3 6 169 46 208 6.03e-48 177
Msa0855730 AT3G04060.1 52.866 157 69 3 4 157 18 172 7.60e-48 171
Msa0855730 AT3G44290.2 54.110 146 59 3 8 153 16 153 1.02e-47 167
Msa0855730 AT5G13180.1 52.903 155 65 3 4 156 12 160 1.49e-47 168
Msa0855730 AT2G27300.1 51.592 157 68 2 1 157 9 157 1.77e-47 171
Msa0855730 AT3G44290.1 54.110 146 59 3 8 153 16 153 4.09e-47 169
Msa0855730 AT2G17040.1 47.399 173 79 5 8 177 8 171 5.33e-47 167
Msa0855730 AT2G43000.1 51.974 152 70 2 8 158 20 169 1.16e-46 166
Msa0855730 AT1G26870.1 46.108 167 77 3 6 161 16 180 2.13e-46 170
Msa0855730 AT5G39820.1 45.198 177 70 4 8 160 22 195 6.57e-46 166
Msa0855730 AT4G28530.1 52.353 170 55 7 6 156 10 172 1.01e-44 163
Msa0855730 AT1G52880.1 53.125 160 61 5 10 157 21 178 7.13e-43 157
Msa0855730 AT5G04395.1 47.260 146 63 2 2 133 24 169 7.57e-39 142
Msa0855730 AT3G12910.1 45.238 168 70 6 8 157 23 186 6.64e-37 140
Msa0855730 AT4G10350.2 52.041 98 47 0 63 160 20 117 1.17e-32 128
Msa0855730 AT5G61430.2 58.763 97 38 2 63 157 8 104 5.42e-32 125
Msa0855730 AT3G12977.2 55.670 97 42 1 63 158 20 116 6.81e-32 124
Msa0855730 AT4G01520.1 42.105 152 78 5 7 153 5 151 3.12e-31 124
Msa0855730 AT3G44350.2 40.260 154 87 4 9 157 8 161 1.62e-30 120
Msa0855730 AT5G22380.1 41.447 152 82 5 9 153 8 159 3.47e-30 119
Msa0855730 AT4G01550.1 43.421 152 77 4 9 156 7 153 1.45e-29 122
Msa0855730 AT1G56010.1 54.545 99 42 1 63 158 8 106 1.61e-29 118
Msa0855730 AT4G01540.4 40.909 154 81 5 9 157 7 155 3.19e-29 120
Msa0855730 AT4G01540.2 41.333 150 78 5 9 153 7 151 3.31e-29 121
Msa0855730 AT4G01540.3 40.667 150 79 4 9 153 7 151 4.00e-29 120
Msa0855730 AT4G01540.1 41.333 150 78 5 9 153 7 151 5.64e-29 121
Msa0855730 AT2G33480.3 53.191 94 44 0 63 156 10 103 1.35e-28 114
Msa0855730 AT5G64530.2 42.537 134 61 4 4 135 1 120 3.63e-28 111
Msa0855730 AT5G64530.1 43.182 132 59 4 4 133 1 118 9.14e-28 110
Msa0855730 AT4G28530.2 54.545 110 30 3 6 98 10 116 9.21e-28 114
Msa0855730 AT3G44350.1 39.310 145 83 4 9 148 8 152 2.64e-27 108
Msa0855730 AT3G04420.2 36.774 155 91 2 7 159 4 153 4.75e-27 112
Msa0855730 AT1G02230.1 40.132 152 79 5 7 153 4 148 1.01e-26 112
Msa0855730 AT3G04420.1 36.774 155 91 2 7 159 4 153 1.68e-26 111
Msa0855730 AT3G10490.4 58.889 90 35 2 81 169 2 90 1.20e-24 106
Msa0855730 AT3G10490.3 58.889 90 35 2 81 169 2 90 1.20e-24 106
Msa0855730 AT1G02250.1 38.961 154 78 6 7 153 4 148 3.67e-24 105
Msa0855730 AT1G01010.1 31.250 224 122 7 9 207 6 222 1.18e-23 104
Msa0855730 AT1G02220.1 34.437 151 87 4 7 154 4 145 8.82e-22 98.6
Msa0855730 AT2G43000.2 48.889 90 45 1 70 158 2 91 1.06e-20 90.9
Msa0855730 AT3G56530.1 32.237 152 98 3 4 153 50 198 1.26e-18 87.8
Msa0855730 AT2G18060.2 45.070 71 37 1 86 156 2 70 3.86e-18 85.5
Msa0855730 AT3G55210.1 32.919 161 90 5 6 153 11 166 8.13e-18 84.7
Msa0855730 AT5G22290.2 53.731 67 25 1 87 153 2 62 3.32e-17 82.0
Msa0855730 AT5G14000.2 31.818 132 84 2 4 133 13 140 3.59e-17 79.7
Msa0855730 AT5G14000.1 31.818 132 84 2 4 133 13 140 3.18e-16 78.2
Msa0855730 AT5G50820.1 33.582 134 75 4 4 133 15 138 7.75e-16 77.0
Msa0855730 AT3G04430.1 35.606 132 71 5 12 131 6 135 2.00e-15 75.9
Msa0855730 AT5G56620.3 31.548 168 79 7 4 139 41 204 1.92e-11 67.0
Msa0855730 AT5G56620.2 31.548 168 79 7 4 139 41 204 2.04e-11 67.0
Msa0855730 AT5G56620.1 31.548 168 79 7 4 139 41 204 2.41e-11 66.6
Msa0855730 AT4G29230.3 31.250 160 83 6 4 139 46 202 5.62e-11 65.5
Msa0855730 AT4G29230.1 31.481 162 80 7 4 139 46 202 7.57e-11 65.5
Msa0855730 AT4G29230.2 31.481 162 80 7 4 139 45 201 7.69e-11 65.5

Find 162 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTCTTCATTTACTAATTA+TGG 0.123529 5_4:-49588332 Msa0855730:CDS
TTTCATTGCCTCCAGGTTTC+AGG 0.142642 5_4:-49591083 Msa0855730:CDS
TTTGATGCATCGTGTTTATT+TGG 0.178984 5_4:-49586102 Msa0855730:CDS
CCCATGGCTCTCGTACAAAT+TGG 0.222002 5_4:-49589126 Msa0855730:CDS
CGACAAGGGATCATGGAAAT+TGG 0.232604 5_4:-49588397 Msa0855730:CDS
CCATATTGTCCTCCAACTTT+TGG 0.268556 5_4:+49588587 None:intergenic
TTGTTGCTTATTATCTAAAT+AGG 0.273542 5_4:-49591038 Msa0855730:CDS
ACGAATCGTGCAACCAAATC+TGG 0.280386 5_4:-49589244 Msa0855730:CDS
TATCTAAATAGGAAGATTAA+TGG 0.282813 5_4:-49591027 Msa0855730:CDS
ATCAAAGAAAATAGCAAGTT+TGG 0.283752 5_4:-49586147 Msa0855730:CDS
TTGATTGGTCACTTGTTATC+TGG 0.283981 5_4:+49588543 None:intergenic
TCTATAGAGTGTTTATTGTT+TGG 0.309883 5_4:+49586266 None:intergenic
TTCACTTAATCATGCTTCTC+AGG 0.318478 5_4:-49587437 Msa0855730:CDS
CCAAAAGTTGGAGGACAATA+TGG 0.318542 5_4:-49588587 Msa0855730:CDS
TGAGATCATTGAGGAAATAA+AGG 0.320384 5_4:-49586390 Msa0855730:CDS
ATCCAAGGCTTGTAAATAAC+TGG 0.328844 5_4:+49587399 None:intergenic
TGTTTATTGTTTGGCATCAT+TGG 0.334489 5_4:+49586275 None:intergenic
TGATCTCCAATTCAATCTTA+TGG 0.341534 5_4:+49591004 None:intergenic
ATTATTACCTGGGAATGATA+TGG 0.349131 5_4:-49589317 Msa0855730:CDS
TCTTCTACAAAATTCTCATT+GGG 0.352827 5_4:+49586449 None:intergenic
ATCTTCTACAAAATTCTCAT+TGG 0.355837 5_4:+49586448 None:intergenic
TGCCTTCCAATACCCAGATT+TGG 0.362335 5_4:+49589231 None:intergenic
TGAAACCACTCCTAGCTTGC+AGG 0.368248 5_4:-49589068 Msa0855730:intron
GGAGGTCCAAAGTATATATA+TGG 0.371929 5_4:-49591112 None:intergenic
GGCTTGCTCACCTCACAATA+TGG 0.378311 5_4:-49588450 Msa0855730:CDS
GTCCAGTTATTTACAAGCCT+TGG 0.389203 5_4:-49587401 Msa0855730:CDS
GGACAATATGGTAATATTAC+AGG 0.392348 5_4:-49588575 Msa0855730:CDS
TCAAAAGAGGTTTGGTTTGT+TGG 0.393311 5_4:-49585990 Msa0855730:CDS
GTAGTTGGAAGACTAAATAA+TGG 0.394217 5_4:+49588353 None:intergenic
TAATGGCCATAAGATTGAAT+TGG 0.404348 5_4:-49591010 Msa0855730:CDS
ATAGCTCAACGTTTGTTGAT+TGG 0.409354 5_4:+49588528 None:intergenic
GGAATGAGTCAAAAGAGGTT+TGG 0.411979 5_4:-49585998 Msa0855730:CDS
ATCTTTCTTCATGAAGTTCA+AGG 0.415168 5_4:-49586204 Msa0855730:CDS
TCTGGGTATTGGAAGGCAAC+CGG 0.415206 5_4:-49589226 Msa0855730:CDS
AGGCCTATGTGATGGGGAAA+TGG 0.422475 5_4:-49586184 Msa0855730:CDS
CCAGGGAAATCATTATTACC+TGG 0.422516 5_4:-49589328 Msa0855730:intron
GTAGAGAATTTGAGATGGAT+TGG 0.422814 5_4:-49587199 Msa0855730:CDS
AATTGCAAATGATATCTTGC+AGG 0.423405 5_4:-49587467 Msa0855730:CDS
TGGGATATGTTGACAAAACT+TGG 0.424746 5_4:-49587291 Msa0855730:CDS
CATTGTGTTCCCTTGATGTT+TGG 0.427811 5_4:+49586954 None:intergenic
ATTTCTTTAGCCCTCGTGAT+AGG 0.430194 5_4:-49589288 Msa0855730:CDS
AAATTATTTGATGCAAATGA+AGG 0.433232 5_4:-49588471 Msa0855730:CDS
AAACCTGGAGGCAATGAAAC+AGG 0.435510 5_4:+49591087 None:intergenic
CACTTGTTATCTGGTTTGCA+TGG 0.440837 5_4:+49588552 None:intergenic
TTAGTAAATGAAGAAGTAGT+TGG 0.441517 5_4:+49588338 None:intergenic
CCATGGCTCTCGTACAAATT+GGG 0.441564 5_4:-49589125 Msa0855730:CDS
AGATGCAAAGATGATGATAA+TGG 0.441835 5_4:-49586237 Msa0855730:CDS
CTCTTCCTCGATAGTAAACT+AGG 0.442628 5_4:+49589152 None:intergenic
GTGCAACCAAATCTGGGTAT+TGG 0.448103 5_4:-49589237 Msa0855730:CDS
AGTGTGGTCTTGAAGGAAAT+AGG 0.448391 5_4:-49585945 Msa0855730:CDS
CTTGGATGGAGGGTATGTTA+TGG 0.457226 5_4:+49588307 None:intergenic
AGGATTAAGTGTGGTCTTGA+AGG 0.457233 5_4:-49585952 Msa0855730:CDS
AAAGGTTAGTCATAGAATGT+TGG 0.457270 5_4:-49586372 Msa0855730:CDS
GTTTACTATGCCTCCATTGG+AGG 0.458982 5_4:-49587542 Msa0855730:CDS
TACTATGCCTCCATTGGAGG+TGG 0.460939 5_4:-49587539 Msa0855730:CDS
GACAAGGGATCATGGAAATT+GGG 0.465207 5_4:-49588396 Msa0855730:CDS
GATTCGTTCTAGATCCATTC+GGG 0.466518 5_4:+49589260 None:intergenic
GCACCTGTTTCATTGCCTCC+AGG 0.468560 5_4:-49591090 Msa0855730:CDS
AGAAGGAGAACCTGCAAGCT+AGG 0.472184 5_4:+49589058 None:intergenic
AAAGTAAAATCATCTTCATA+AGG 0.480913 5_4:+49587358 None:intergenic
TAGGTTTACTATGCCTCCAT+TGG 0.482015 5_4:-49587545 Msa0855730:CDS
GTGGAGGAATTTCCTCAAGT+TGG 0.490438 5_4:-49587520 Msa0855730:CDS
CGATTCGTTCTAGATCCATT+CGG 0.490510 5_4:+49589259 None:intergenic
AACACAAGATCTATAGAGAT+AGG 0.493319 5_4:-49587259 Msa0855730:CDS
TAGTTGGAAGACTAAATAAT+GGG 0.497545 5_4:+49588354 None:intergenic
CCCAATTTGTACGAGAGCCA+TGG 0.500594 5_4:+49589125 None:intergenic
TCACTTAATCATGCTTCTCA+GGG 0.500637 5_4:-49587436 Msa0855730:CDS
AAGTTCAAGGCCTATGTGAT+GGG 0.501395 5_4:-49586191 Msa0855730:CDS
TCCTCAATGATCTCAAAGCT+TGG 0.501853 5_4:+49586398 None:intergenic
GATGCATCGTGTTTATTTGG+AGG 0.502081 5_4:-49586099 Msa0855730:CDS
AATGGTACGACAAGGGATCA+TGG 0.502815 5_4:-49588404 Msa0855730:CDS
ATGATATCAGTGAATTCTCA+TGG 0.503256 5_4:-49586493 Msa0855730:CDS
TTGAGCTATACTCTGAAAGA+AGG 0.503430 5_4:-49588514 Msa0855730:CDS
ATGAATATCGTCTTGATGAG+AGG 0.503672 5_4:-49589096 Msa0855730:CDS
AGCATGAAATATCCTCCATT+GGG 0.507467 5_4:+49586978 None:intergenic
ACAGTGATTGTGCCAAAAGT+TGG 0.507511 5_4:-49588599 Msa0855730:CDS
CCAATTTGTACGAGAGCCAT+GGG 0.509568 5_4:+49589126 None:intergenic
CATGAATGATATGAGCTCCA+TGG 0.513072 5_4:-49587311 Msa0855730:CDS
AATCACATGAGAGAGTCAAA+TGG 0.514617 5_4:-49586019 Msa0855730:CDS
TAGCATGAAATATCCTCCAT+TGG 0.516471 5_4:+49586977 None:intergenic
TGTGAACCGTGGGACTTGCC+AGG 0.519080 5_4:-49590958 Msa0855730:intron
GAGACTTCTCTCAATATCAA+TGG 0.521212 5_4:-49588422 Msa0855730:CDS
AATTCTCAAGCTCGAGCAGT+AGG 0.521751 5_4:-49589187 Msa0855730:CDS
GGAAATTCCTCCACCTCCAA+TGG 0.528982 5_4:+49587529 None:intergenic
TTTCATGCTACCAAACATCA+AGG 0.530340 5_4:-49586964 Msa0855730:CDS
AGGTTTCAGGTTCCACCCTA+CGG 0.532914 5_4:-49591070 Msa0855730:CDS
CAGGGAAATCATTATTACCT+GGG 0.538350 5_4:-49589327 Msa0855730:CDS
AAGATGATGATAATGGAGAA+TGG 0.544768 5_4:-49586230 Msa0855730:CDS
ATGAATGATATGAGCTCCAT+GGG 0.545336 5_4:-49587310 Msa0855730:CDS
TATGCCTCCATTGGAGGTGG+AGG 0.545899 5_4:-49587536 Msa0855730:CDS
TGAGCTATACTCTGAAAGAA+GGG 0.546148 5_4:-49588513 Msa0855730:CDS
CGAATCGTGCAACCAAATCT+GGG 0.546533 5_4:-49589243 Msa0855730:CDS
GAAGTTCAAGGCCTATGTGA+TGG 0.547907 5_4:-49586192 Msa0855730:CDS
TCATGGGGATTCATCAATGA+TGG 0.548361 5_4:-49586476 Msa0855730:CDS
CTGGGTATTGGAAGGCAACC+GGG 0.551323 5_4:-49589225 Msa0855730:CDS
TGATATCAGTGAATTCTCAT+GGG 0.554636 5_4:-49586492 Msa0855730:CDS
CAAATTCTCTACCATCCGCT+TGG 0.560463 5_4:+49587210 None:intergenic
TCCAAGCTTTGAGATCATTG+AGG 0.563456 5_4:-49586399 Msa0855730:CDS
CTGTACTCTTCTTGATCACA+CGG 0.568059 5_4:+49588618 None:intergenic
CAAATGGAATGAGTCAAAAG+AGG 0.568226 5_4:-49586003 Msa0855730:CDS
TACCACTCCATATCATTCCC+AGG 0.569597 5_4:+49589310 None:intergenic
GCAACAAGTTCTTCATCCGT+AGG 0.570402 5_4:+49591054 None:intergenic
ATTCTCAAGCTCGAGCAGTA+GGG 0.570616 5_4:-49589186 Msa0855730:CDS
AGCACAAAATGTTGTCCCAA+TGG 0.571545 5_4:-49586993 Msa0855730:CDS
GTTCCATTTCCCCATCACAT+AGG 0.572384 5_4:+49586181 None:intergenic
CAACAAGTTCTTCATCCGTA+GGG 0.572552 5_4:+49591055 None:intergenic
AGTGTGCAAGGATGCAACAT+AGG 0.574842 5_4:-49587564 Msa0855730:CDS
AGCTTGGAGAATTTGAGTAA+TGG 0.575389 5_4:+49586414 None:intergenic
TGAATTTGAAGTGTTTGTGA+AGG 0.576360 5_4:+49586305 None:intergenic
GTAGGGTGGAACCTGAAACC+TGG 0.578503 5_4:+49591072 None:intergenic
TTCTCAAGCTCGAGCAGTAG+GGG 0.579595 5_4:-49589185 Msa0855730:CDS
TGAATATCGTCTTGATGAGA+GGG 0.582090 5_4:-49589095 Msa0855730:CDS
GTGATTGTGCCAAAAGTTGG+AGG 0.584888 5_4:-49588596 Msa0855730:CDS
CTTCCTTGTTGTGTCACATG+AGG 0.585636 5_4:+49587493 None:intergenic
AGGGAACACAATGGCATGCA+AGG 0.586165 5_4:-49586944 Msa0855730:intron
TATAGAGATAGGTGATCTAG+AGG 0.589067 5_4:-49587248 Msa0855730:CDS
TCTCTATAAGTGTGAACCGT+GGG 0.592650 5_4:-49590968 Msa0855730:CDS
GTTGGTGTAAAATGTGAGAG+AGG 0.593869 5_4:-49585972 Msa0855730:CDS
ATTGCAAATGATATCTTGCA+GGG 0.597558 5_4:-49587466 Msa0855730:CDS
TTCGGGTACTTCCTATCACG+AGG 0.598759 5_4:+49589277 None:intergenic
AACCAAATCTGGGTATTGGA+AGG 0.600307 5_4:-49589233 Msa0855730:CDS
AAATTACCTGGCAAGTCCCA+CGG 0.604416 5_4:+49590952 None:intergenic
TCTAGAGGATCAAGAGTCAA+AGG 0.606182 5_4:-49587233 Msa0855730:CDS
TCTTCCTCGATAGTAAACTA+GGG 0.609563 5_4:+49589153 None:intergenic
GGGATATGTTGACAAAACTT+GGG 0.610464 5_4:-49587290 Msa0855730:CDS
AGAGTCAAAGGCCAAGCGGA+TGG 0.610665 5_4:-49587221 Msa0855730:CDS
GTCTCATTTACCATATTGTG+AGG 0.612804 5_4:+49588440 None:intergenic
AACTTGGTGAAATAATGTCA+TGG 0.614916 5_4:+49586331 None:intergenic
CATAACATACCCTCCATCCA+AGG 0.617588 5_4:-49588306 Msa0855730:intron
ACAAAATGTTGTCCCAATGG+AGG 0.618611 5_4:-49586990 Msa0855730:CDS
GTATTGGAAGGCAACCGGGA+AGG 0.620851 5_4:-49589221 Msa0855730:CDS
ACATGAGGTATTCCAACTTG+AGG 0.622240 5_4:+49587508 None:intergenic
CTTCTACAAAATTCTCATTG+GGG 0.623221 5_4:+49586450 None:intergenic
GGATGGTAGAGAATTTGAGA+TGG 0.631431 5_4:-49587204 Msa0855730:CDS
CGTGATAGGAAGTACCCGAA+TGG 0.632326 5_4:-49589274 Msa0855730:CDS
AATTCCTCCACCTCCAATGG+AGG 0.633153 5_4:+49587532 None:intergenic
AAAACCCTAGTTTACTATCG+AGG 0.634321 5_4:-49589157 Msa0855730:CDS
TGTACCACATGGGCTAGCCA+TGG 0.637402 5_4:-49585894 Msa0855730:CDS
CAAGTTCTTCATCCGTAGGG+TGG 0.638361 5_4:+49591058 None:intergenic
TCAATATCAATGGTACGACA+AGG 0.648156 5_4:-49588412 Msa0855730:CDS
TTCATGCTACCAAACATCAA+GGG 0.649844 5_4:-49586963 Msa0855730:CDS
ATACCTCATGTGACACAACA+AGG 0.650067 5_4:-49587496 Msa0855730:CDS
AGAAGATCAAGGGTTAGCCA+TGG 0.651875 5_4:+49585877 None:intergenic
GAGCTATACTCTGAAAGAAG+GGG 0.652301 5_4:-49588512 Msa0855730:CDS
TACCTGGGAATGATATGGAG+TGG 0.652400 5_4:-49589312 Msa0855730:CDS
GAGAACCTGCAAGCTAGGAG+TGG 0.654041 5_4:+49589063 None:intergenic
CAATATCAATGGTACGACAA+GGG 0.658341 5_4:-49588411 Msa0855730:CDS
TTTGGCGCTTTGTACCACAT+GGG 0.659507 5_4:-49585904 Msa0855730:CDS
ATCTCTATAAGTGTGAACCG+TGG 0.665137 5_4:-49590969 Msa0855730:CDS
ATGTGAGAGAGGATTAAGTG+TGG 0.666354 5_4:-49585961 Msa0855730:CDS
ATATTGCACTAGAGTGTGCA+AGG 0.673783 5_4:-49587576 Msa0855730:CDS
ATGATGATAATGGAGAATGG+AGG 0.674089 5_4:-49586227 Msa0855730:CDS
ATCAAGAGTCAAAGGCCAAG+CGG 0.676267 5_4:-49587225 Msa0855730:CDS
GATATCAGTGAATTCTCATG+GGG 0.677165 5_4:-49586491 Msa0855730:CDS
TATCGAGGAAGAGCACCCCA+TGG 0.678830 5_4:-49589142 Msa0855730:CDS
TTAGCCATGGCTAGCCCATG+TGG 0.679756 5_4:+49585890 None:intergenic
GTGTTTGTGAAGGAACAACT+TGG 0.687378 5_4:+49586315 None:intergenic
AGTTCAAGGCCTATGTGATG+GGG 0.690612 5_4:-49586190 Msa0855730:CDS
CAAACATCAAGGGAACACAA+TGG 0.716596 5_4:-49586953 Msa0855730:CDS
TCGGGTACTTCCTATCACGA+GGG 0.722170 5_4:+49589278 None:intergenic
GGGTGGAACCTGAAACCTGG+AGG 0.736395 5_4:+49591075 None:intergenic
CAATTTGTACGAGAGCCATG+GGG 0.773296 5_4:+49589127 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAAATATTAAATTTA+AGG + chr5_4:49586257-49586276 None:intergenic 0.0%
!!! AAAATTTTATATAAAAAAAA+AGG + chr5_4:49589148-49589167 None:intergenic 0.0%
!!! ATTTATCTGATTTTTTATTT+CGG + chr5_4:49586150-49586169 None:intergenic 10.0%
!! TAAATATTAAATTTAAGGAT+GGG + chr5_4:49586252-49586271 None:intergenic 10.0%
!! ATAAATATTAAATTTAAGGA+TGG + chr5_4:49586253-49586272 None:intergenic 10.0%
!!! ATATTTTGCATTAATTATTT+TGG + chr5_4:49587432-49587451 None:intergenic 10.0%
!! AAAATAATTAATGCAAAATA+TGG - chr5_4:49587431-49587450 Msa0855730:CDS 10.0%
!! AAATAATTAATGCAAAATAT+GGG - chr5_4:49587432-49587451 Msa0855730:CDS 10.0%
!! TATTATTACAAAAACTTAAT+AGG + chr5_4:49587572-49587591 None:intergenic 10.0%
!!! TTAAGATCAATATTTTTATA+TGG - chr5_4:49589944-49589963 Msa0855730:intron 10.0%
!!! AACTAAATAAATTTGGTAAT+TGG + chr5_4:49586280-49586299 None:intergenic 15.0%
!! ATTTGAGTAAAAAATAATGT+TGG + chr5_4:49586618-49586637 None:intergenic 15.0%
!! TAACGATCTAATTTATTAAT+TGG + chr5_4:49586788-49586807 None:intergenic 15.0%
!!! TATAGACATTTTTTTTTTTG+AGG - chr5_4:49586942-49586961 Msa0855730:intron 15.0%
!!! ATAGACATTTTTTTTTTTGA+GGG - chr5_4:49586943-49586962 Msa0855730:intron 15.0%
!! AATATAAACAAATAGTGTTT+AGG + chr5_4:49587306-49587325 None:intergenic 15.0%
!! AATAATTAATGCAAAATATG+GGG - chr5_4:49587433-49587452 Msa0855730:CDS 15.0%
!! ACAAAAATAAAACTTCAAAT+TGG + chr5_4:49587629-49587648 None:intergenic 15.0%
!! AAGCGAAAAAATTATTAAAA+TGG + chr5_4:49587982-49588001 None:intergenic 15.0%
!! TATTGGTATAATATTATGTA+TGG + chr5_4:49588112-49588131 None:intergenic 15.0%
!!! TAATTAGAGTAATTTCATTT+TGG - chr5_4:49588150-49588169 Msa0855730:intron 15.0%
!!! TTTAAAAAAAGTGTAACATT+AGG + chr5_4:49588230-49588249 None:intergenic 15.0%
!! TTAAAAACACAAAAATGTAT+GGG + chr5_4:49590085-49590104 None:intergenic 15.0%
!!! TTGATGTATTTGATTTATAA+TGG + chr5_4:49590185-49590204 None:intergenic 15.0%
!! CAATTTGTATCTTATAAAAA+AGG - chr5_4:49590216-49590235 Msa0855730:intron 15.0%
!!! AGAAAAGATTTAAAATTCAA+AGG + chr5_4:49590396-49590415 None:intergenic 15.0%
!!! ATTTTAAATCTTTTCTTTTC+CGG - chr5_4:49590400-49590419 Msa0855730:intron 15.0%
!!! TTGTTGCTTATTATCTAAAT+AGG - chr5_4:49585951-49585970 Msa0855730:CDS 20.0%
!! TATCTAAATAGGAAGATTAA+TGG - chr5_4:49585962-49585981 Msa0855730:CDS 20.0%
!! GCTCTATAACTAAATAAATT+TGG + chr5_4:49586320-49586339 None:intergenic 20.0%
!!! CTACAATCAATTTTGATTAT+AGG - chr5_4:49586662-49586681 Msa0855730:intron 20.0%
!!! CAAATATATGCTTACTTTTT+TGG - chr5_4:49586914-49586933 Msa0855730:intron 20.0%
!!! TAGACATTTTTTTTTTTGAG+GGG - chr5_4:49586944-49586963 Msa0855730:intron 20.0%
!! TGTGATTGATATAGTAAAAA+AGG - chr5_4:49587018-49587037 Msa0855730:intron 20.0%
!! ACTTTATATCCTAACTAATT+TGG - chr5_4:49587381-49587400 Msa0855730:CDS 20.0%
!! TTTGTCAAAAAAAAAGTTGA+AGG + chr5_4:49588022-49588041 None:intergenic 20.0%
!!! GATTAGATTTCTATTTTGTT+TGG + chr5_4:49588202-49588221 None:intergenic 20.0%
!! AAATTATTTGATGCAAATGA+AGG - chr5_4:49588518-49588537 Msa0855730:CDS 20.0%
!! ACTTCTTCATTTACTAATTA+TGG - chr5_4:49588657-49588676 Msa0855730:intron 20.0%
!! AAAAAAAACAATCATCCAAT+TGG - chr5_4:49589343-49589362 Msa0855730:intron 20.0%
!! AAAAAAACAATCATCCAATT+GGG - chr5_4:49589344-49589363 Msa0855730:intron 20.0%
!! AATTCAAGTATTATATGCAA+AGG + chr5_4:49589379-49589398 None:intergenic 20.0%
!!! AATACTTGAATTTATTTTGC+AGG - chr5_4:49589387-49589406 Msa0855730:intron 20.0%
!! AAAGTAAAATCATCTTCATA+AGG + chr5_4:49589634-49589653 None:intergenic 20.0%
!!! AGTATTTTTATTTTTTTCGG+TGG - chr5_4:49589845-49589864 Msa0855730:intron 20.0%
!!! AATTTTCCAATTTGTATAGA+TGG - chr5_4:49589972-49589991 Msa0855730:intron 20.0%
!! GTTAAAAACACAAAAATGTA+TGG + chr5_4:49590086-49590105 None:intergenic 20.0%
!!! TCTTTCTGATCATTTTTATA+AGG - chr5_4:49590123-49590142 Msa0855730:intron 20.0%
!!! CTTTCTGATCATTTTTATAA+GGG - chr5_4:49590124-49590143 Msa0855730:intron 20.0%
!! AGTAATAGTACTCTATTAAA+TGG + chr5_4:49590350-49590369 None:intergenic 20.0%
!! TACTATTACTTTATTGATCA+TGG - chr5_4:49590360-49590379 Msa0855730:intron 20.0%
! CCATAATATGAATTATAGCA+AGG + chr5_4:49586465-49586484 None:intergenic 25.0%
!! CCTTGCTATAATTCATATTA+TGG - chr5_4:49586462-49586481 Msa0855730:CDS 25.0%
! GCTATAATTCATATTATGGA+AGG - chr5_4:49586466-49586485 Msa0855730:CDS 25.0%
!! CATACAGTACAAGAAATTTT+TGG + chr5_4:49586692-49586711 None:intergenic 25.0%
!!! AGACATTTTTTTTTTTGAGG+GGG - chr5_4:49586945-49586964 Msa0855730:CDS 25.0%
! ATAATCTTGATTACCACAAT+AGG + chr5_4:49587093-49587112 None:intergenic 25.0%
! TAAAGTGATTTAGTAGTTTG+AGG + chr5_4:49587234-49587253 None:intergenic 25.0%
!! TAAAGTGTCAATATTTGCAT+GGG + chr5_4:49587367-49587386 None:intergenic 25.0%
!! ATAAAGTGTCAATATTTGCA+TGG + chr5_4:49587368-49587387 None:intergenic 25.0%
! TTATATCCTAACTAATTTGG+CGG - chr5_4:49587384-49587403 Msa0855730:CDS 25.0%
!!! GATTACTGTTTTTGACAATA+TGG - chr5_4:49587472-49587491 Msa0855730:CDS 25.0%
!! TTTTGTCTTCTTATAATTCC+AGG - chr5_4:49587643-49587662 Msa0855730:intron 25.0%
! TTTGTCTTCTTATAATTCCA+GGG - chr5_4:49587644-49587663 Msa0855730:intron 25.0%
! AAAAGTGAGAAAAAGAAAGA+AGG + chr5_4:49587951-49587970 None:intergenic 25.0%
! AAAAAGTTGAAGGATTCTAA+AGG + chr5_4:49588012-49588031 None:intergenic 25.0%
! TGTAGTCTAAGTATAAAACT+CGG + chr5_4:49588068-49588087 None:intergenic 25.0%
!!! CATTTTAGCTAGAAGAATAT+TGG + chr5_4:49588129-49588148 None:intergenic 25.0%
! ACACATCAAAATGTAGAAAT+TGG + chr5_4:49588299-49588318 None:intergenic 25.0%
! TAGTTGGAAGACTAAATAAT+GGG + chr5_4:49588638-49588657 None:intergenic 25.0%
! TTAGTAAATGAAGAAGTAGT+TGG + chr5_4:49588654-49588673 None:intergenic 25.0%
! TCAAATTAAATTTGTGTGCA+TGG + chr5_4:49588723-49588742 None:intergenic 25.0%
!!! TTACTTTTACCAACTTACAT+AGG - chr5_4:49589061-49589080 Msa0855730:intron 25.0%
!! TACTTTTACCAACTTACATA+GGG - chr5_4:49589062-49589081 Msa0855730:intron 25.0%
!! AAATTAGACTTTTTGAACCT+TGG - chr5_4:49589292-49589311 Msa0855730:CDS 25.0%
!!! ATATTTTAGTGTCTAAGCTT+GGG + chr5_4:49589320-49589339 None:intergenic 25.0%
!! ATAATTTTCATTGTCATCCA+AGG + chr5_4:49589608-49589627 None:intergenic 25.0%
!! TGAAGATGATTTTACTTTCA+TGG - chr5_4:49589636-49589655 Msa0855730:intron 25.0%
! AAGGACAAGAGAAAAAAAAA+AGG - chr5_4:49590235-49590254 Msa0855730:intron 25.0%
!!! AATGAGTAATATATCGACTT+TGG - chr5_4:49590302-49590321 Msa0855730:intron 25.0%
!! GTAAAAACCATCATTTTGTT+AGG + chr5_4:49590428-49590447 None:intergenic 25.0%
!!! TATCATTGTCATTTTGTTCA+AGG + chr5_4:49590482-49590501 None:intergenic 25.0%
! TCTTCTACAAAATTCTCATT+GGG + chr5_4:49590543-49590562 None:intergenic 25.0%
! ATCTTCTACAAAATTCTCAT+TGG + chr5_4:49590544-49590563 None:intergenic 25.0%
!! AATGAGAATTTTGTAGAAGA+TGG - chr5_4:49590543-49590562 Msa0855730:intron 25.0%
!! TTTTGTAGAAGATGGTAAAA+TGG - chr5_4:49590551-49590570 Msa0855730:intron 25.0%
!! TCTATAGAGTGTTTATTGTT+TGG + chr5_4:49590726-49590745 None:intergenic 25.0%
!!! AACTTGCTATTTTCTTTGAT+GGG + chr5_4:49590842-49590861 None:intergenic 25.0%
!!! AAACTTGCTATTTTCTTTGA+TGG + chr5_4:49590843-49590862 None:intergenic 25.0%
! ATCAAAGAAAATAGCAAGTT+TGG - chr5_4:49590842-49590861 Msa0855730:intron 25.0%
!!! TCTTTCATCTTTTTTGGTTT+TGG + chr5_4:49590936-49590955 None:intergenic 25.0%
!! CTTTTCTCTTTCATCTTTTT+TGG + chr5_4:49590942-49590961 None:intergenic 25.0%
!! CATTTTCTTCACCATATTTT+TGG - chr5_4:49591067-49591086 Msa0855730:CDS 25.0%
TAATGGCCATAAGATTGAAT+TGG - chr5_4:49585979-49585998 Msa0855730:CDS 30.0%
TGATCTCCAATTCAATCTTA+TGG + chr5_4:49585988-49586007 None:intergenic 30.0%
! CGTGTTCAGTTTACAAATTT+TGG - chr5_4:49586100-49586119 Msa0855730:CDS 30.0%
GCTATAGTTCATATCATAGA+AGG - chr5_4:49586506-49586525 Msa0855730:CDS 30.0%
! ATGATTTTGTAGACCTTAAC+AGG - chr5_4:49586818-49586837 Msa0855730:intron 30.0%
! TGATTTTGTAGACCTTAACA+GGG - chr5_4:49586819-49586838 Msa0855730:intron 30.0%
!!! ATTTTTTTTTTTGAGGGGGA+CGG - chr5_4:49586949-49586968 Msa0855730:CDS 30.0%
! AAAAGCGTAAACCAAAGAAA+AGG - chr5_4:49587141-49587160 Msa0855730:intron 30.0%
! TAAGAATGTCTCCTTTTCTT+TGG + chr5_4:49587155-49587174 None:intergenic 30.0%
! CTCTTTGGAAAATTCTACTA+TGG + chr5_4:49587334-49587353 None:intergenic 30.0%
TATATCCTAACTAATTTGGC+GGG - chr5_4:49587385-49587404 Msa0855730:CDS 30.0%
ATTATTACCTGGGAATGATA+TGG - chr5_4:49587672-49587691 Msa0855730:intron 30.0%
! AAAAGTGTAACATTAGGCTA+GGG + chr5_4:49588224-49588243 None:intergenic 30.0%
! AAAAAGTGTAACATTAGGCT+AGG + chr5_4:49588225-49588244 None:intergenic 30.0%
TGAAAAATAATCACAACCTC+AGG - chr5_4:49588332-49588351 Msa0855730:CDS 30.0%
GGACAATATGGTAATATTAC+AGG - chr5_4:49588414-49588433 Msa0855730:CDS 30.0%
GTAGTTGGAAGACTAAATAA+TGG + chr5_4:49588639-49588658 None:intergenic 30.0%
TGTATAGCTTCTTGAAATTG+CGG - chr5_4:49588825-49588844 Msa0855730:intron 30.0%
ACTTCTCTTAAGCATTTGTT+TGG + chr5_4:49588895-49588914 None:intergenic 30.0%
! AAGTGTGAAATTGTGTGTTT+TGG + chr5_4:49588949-49588968 None:intergenic 30.0%
TGATCTCACTATCTTATCTT+AGG + chr5_4:49589230-49589249 None:intergenic 30.0%
AGATAAGATAGTGAGATCAA+AGG - chr5_4:49589231-49589250 Msa0855730:CDS 30.0%
GATAAGATAGTGAGATCAAA+GGG - chr5_4:49589232-49589251 Msa0855730:CDS 30.0%
!!! TATTTTAGTGTCTAAGCTTG+GGG + chr5_4:49589319-49589338 None:intergenic 30.0%
!!! CATATTTTAGTGTCTAAGCT+TGG + chr5_4:49589321-49589340 None:intergenic 30.0%
!!! ACTTGAATTTATTTTGCAGG+TGG - chr5_4:49589390-49589409 Msa0855730:intron 30.0%
AATTGCAAATGATATCTTGC+AGG - chr5_4:49589522-49589541 Msa0855730:intron 30.0%
ATTGCAAATGATATCTTGCA+GGG - chr5_4:49589523-49589542 Msa0855730:intron 30.0%
AACACAAGATCTATAGAGAT+AGG - chr5_4:49589730-49589749 Msa0855730:intron 30.0%
! ACCTTTTCAAAATCTTCTCT+TGG + chr5_4:49589820-49589839 None:intergenic 30.0%
TCAACTTTGTAGAAAAGAAG+AGG - chr5_4:49590269-49590288 Msa0855730:intron 30.0%
TTTGTAGAAAAGAAGAGGAT+TGG - chr5_4:49590274-49590293 Msa0855730:intron 30.0%
!! AATGGATTGTTGAGACAAAT+TGG + chr5_4:49590332-49590351 None:intergenic 30.0%
! ATTTAAAATTCAAAGGACCG+AGG + chr5_4:49590389-49590408 None:intergenic 30.0%
ATGATATCAGTGAATTCTCA+TGG - chr5_4:49590496-49590515 Msa0855730:intron 30.0%
TGATATCAGTGAATTCTCAT+GGG - chr5_4:49590497-49590516 Msa0855730:intron 30.0%
CTTCTACAAAATTCTCATTG+GGG + chr5_4:49590542-49590561 None:intergenic 30.0%
TGAGATCATTGAGGAAATAA+AGG - chr5_4:49590599-49590618 Msa0855730:intron 30.0%
! AAAGGTTAGTCATAGAATGT+TGG - chr5_4:49590617-49590636 Msa0855730:intron 30.0%
! AACTTGGTGAAATAATGTCA+TGG + chr5_4:49590661-49590680 None:intergenic 30.0%
! TGAATTTGAAGTGTTTGTGA+AGG + chr5_4:49590687-49590706 None:intergenic 30.0%
TGTTTATTGTTTGGCATCAT+TGG + chr5_4:49590717-49590736 None:intergenic 30.0%
AGATGCAAAGATGATGATAA+TGG - chr5_4:49590752-49590771 Msa0855730:intron 30.0%
!! AAGATGATGATAATGGAGAA+TGG - chr5_4:49590759-49590778 Msa0855730:intron 30.0%
ATCTTTCTTCATGAAGTTCA+AGG - chr5_4:49590785-49590804 Msa0855730:intron 30.0%
!!! TTTTCTTTGATGGGTTGAAT+AGG + chr5_4:49590833-49590852 None:intergenic 30.0%
TTTGATGCATCGTGTTTATT+TGG - chr5_4:49590887-49590906 Msa0855730:intron 30.0%
GATTAGTGTGTGAAATTACC+TGG + chr5_4:49586052-49586071 None:intergenic 35.0%
! GATTGTACTTCTAGAGAAGA+TGG - chr5_4:49587040-49587059 Msa0855730:intron 35.0%
ATAGGATTCCTAAAGCCTAA+AGG + chr5_4:49587075-49587094 None:intergenic 35.0%
!!! TGGTTTACGCTTTTTGACTT+AGG + chr5_4:49587135-49587154 None:intergenic 35.0%
GAAAAGGAGACATTCTTACA+TGG - chr5_4:49587157-49587176 Msa0855730:intron 35.0%
CAGGGAAATCATTATTACCT+GGG - chr5_4:49587662-49587681 Msa0855730:intron 35.0%
AAAACCCTAGTTTACTATCG+AGG - chr5_4:49587832-49587851 Msa0855730:intron 35.0%
TCTTCCTCGATAGTAAACTA+GGG + chr5_4:49587839-49587858 None:intergenic 35.0%
ATGAATATCGTCTTGATGAG+AGG - chr5_4:49587893-49587912 Msa0855730:intron 35.0%
TGAATATCGTCTTGATGAGA+GGG - chr5_4:49587894-49587913 Msa0855730:intron 35.0%
GTCTAAGTATAAAACTCGGT+TGG + chr5_4:49588064-49588083 None:intergenic 35.0%
!! TTGATTGGTCACTTGTTATC+TGG + chr5_4:49588449-49588468 None:intergenic 35.0%
! ATAGCTCAACGTTTGTTGAT+TGG + chr5_4:49588464-49588483 None:intergenic 35.0%
! TTGAGCTATACTCTGAAAGA+AGG - chr5_4:49588475-49588494 Msa0855730:CDS 35.0%
! TGAGCTATACTCTGAAAGAA+GGG - chr5_4:49588476-49588495 Msa0855730:CDS 35.0%
GTCTCATTTACCATATTGTG+AGG + chr5_4:49588552-49588571 None:intergenic 35.0%
GAGACTTCTCTCAATATCAA+TGG - chr5_4:49588567-49588586 Msa0855730:CDS 35.0%
TCAATATCAATGGTACGACA+AGG - chr5_4:49588577-49588596 Msa0855730:CDS 35.0%
CAATATCAATGGTACGACAA+GGG - chr5_4:49588578-49588597 Msa0855730:CDS 35.0%
!! GTATTTTTGTGTACCTTGGA+TGG + chr5_4:49588699-49588718 None:intergenic 35.0%
!! TGGAGTATTTTTGTGTACCT+TGG + chr5_4:49588703-49588722 None:intergenic 35.0%
! TAATGTCTAGAGTTGAACCT+AGG - chr5_4:49589016-49589035 Msa0855730:intron 35.0%
GTATGTTTCCCTATGTAAGT+TGG + chr5_4:49589073-49589092 None:intergenic 35.0%
AAAGGTTCAAAAAGCCCAAT+TGG + chr5_4:49589361-49589380 None:intergenic 35.0%
TTCACTTAATCATGCTTCTC+AGG - chr5_4:49589552-49589571 Msa0855730:intron 35.0%
TCACTTAATCATGCTTCTCA+GGG - chr5_4:49589553-49589572 Msa0855730:intron 35.0%
ATCCAAGGCTTGTAAATAAC+TGG + chr5_4:49589593-49589612 None:intergenic 35.0%
ATGAATGATATGAGCTCCAT+GGG - chr5_4:49589679-49589698 Msa0855730:intron 35.0%
!! AGTTTTGTCAACATATCCCA+TGG + chr5_4:49589698-49589717 None:intergenic 35.0%
TGGGATATGTTGACAAAACT+TGG - chr5_4:49589698-49589717 Msa0855730:intron 35.0%
GGGATATGTTGACAAAACTT+GGG - chr5_4:49589699-49589718 Msa0855730:intron 35.0%
TATAGAGATAGGTGATCTAG+AGG - chr5_4:49589741-49589760 Msa0855730:intron 35.0%
! GTAGAGAATTTGAGATGGAT+TGG - chr5_4:49589790-49589809 Msa0855730:intron 35.0%
!! GCCAAGAGAAGATTTTGAAA+AGG - chr5_4:49589816-49589835 Msa0855730:intron 35.0%
GTGCTTCCATCTATACAAAT+TGG + chr5_4:49589981-49590000 None:intergenic 35.0%
AGCATGAAATATCCTCCATT+GGG + chr5_4:49590014-49590033 None:intergenic 35.0%
TAGCATGAAATATCCTCCAT+TGG + chr5_4:49590015-49590034 None:intergenic 35.0%
TTTCATGCTACCAAACATCA+AGG - chr5_4:49590025-49590044 Msa0855730:intron 35.0%
TTCATGCTACCAAACATCAA+GGG - chr5_4:49590026-49590045 Msa0855730:intron 35.0%
TTTATTGATCATGGTGACCT+CGG - chr5_4:49590369-49590388 Msa0855730:intron 35.0%
! ACCATCATTTTGTTAGGTAC+CGG + chr5_4:49590422-49590441 None:intergenic 35.0%
GATATCAGTGAATTCTCATG+GGG - chr5_4:49590498-49590517 Msa0855730:intron 35.0%
AGCTTGGAGAATTTGAGTAA+TGG + chr5_4:49590578-49590597 None:intergenic 35.0%
!! ATGATGATAATGGAGAATGG+AGG - chr5_4:49590762-49590781 Msa0855730:intron 35.0%
AATCACATGAGAGAGTCAAA+TGG - chr5_4:49590970-49590989 Msa0855730:CDS 35.0%
CAAATGGAATGAGTCAAAAG+AGG - chr5_4:49590986-49591005 Msa0855730:CDS 35.0%
!! TCAAAAGAGGTTTGGTTTGT+TGG - chr5_4:49590999-49591018 Msa0855730:CDS 35.0%
CAACAAGTTCTTCATCCGTA+GGG + chr5_4:49585937-49585956 None:intergenic 40.0%
ATCTCTATAAGTGTGAACCG+TGG - chr5_4:49586020-49586039 Msa0855730:CDS 40.0%
TCTCTATAAGTGTGAACCGT+GGG - chr5_4:49586021-49586040 Msa0855730:CDS 40.0%
AGAAGCTCGTGACTTTCATT+GGG + chr5_4:49586846-49586865 None:intergenic 40.0%
AAGAAGCTCGTGACTTTCAT+TGG + chr5_4:49586847-49586866 None:intergenic 40.0%
TCCTAAAGCCTAAAGGTGAA+GGG + chr5_4:49587068-49587087 None:intergenic 40.0%
TTCCTAAAGCCTAAAGGTGA+AGG + chr5_4:49587069-49587088 None:intergenic 40.0%
!! AGGCTTTAGGAATCCTATTG+TGG - chr5_4:49587077-49587096 Msa0855730:intron 40.0%
TGTCAATATTTGCATGGGAG+TGG + chr5_4:49587362-49587381 None:intergenic 40.0%
GTTTACCCGCCAAATTAGTT+AGG + chr5_4:49587393-49587412 None:intergenic 40.0%
! ACTAATTTGGCGGGTAAACA+TGG - chr5_4:49587394-49587413 Msa0855730:CDS 40.0%
! CTAATTTGGCGGGTAAACAT+GGG - chr5_4:49587395-49587414 Msa0855730:CDS 40.0%
CCAGGTAATAATGATTTCCC+TGG + chr5_4:49587664-49587683 None:intergenic 40.0%
CCAGGGAAATCATTATTACC+TGG - chr5_4:49587661-49587680 Msa0855730:intron 40.0%
ATTTCTTTAGCCCTCGTGAT+AGG - chr5_4:49587701-49587720 Msa0855730:intron 40.0%
! GATTCGTTCTAGATCCATTC+GGG + chr5_4:49587732-49587751 None:intergenic 40.0%
! CGATTCGTTCTAGATCCATT+CGG + chr5_4:49587733-49587752 None:intergenic 40.0%
!! AACCAAATCTGGGTATTGGA+AGG - chr5_4:49587756-49587775 Msa0855730:intron 40.0%
!! ATTCACTTTTCGATCCTTCC+CGG + chr5_4:49587785-49587804 None:intergenic 40.0%
CTCTTCCTCGATAGTAAACT+AGG + chr5_4:49587840-49587859 None:intergenic 40.0%
CTGTACTCTTCTTGATCACA+CGG + chr5_4:49588374-49588393 None:intergenic 40.0%
ACAGTGATTGTGCCAAAAGT+TGG - chr5_4:49588390-49588409 Msa0855730:CDS 40.0%
! CCATATTGTCCTCCAACTTT+TGG + chr5_4:49588405-49588424 None:intergenic 40.0%
CCAAAAGTTGGAGGACAATA+TGG - chr5_4:49588402-49588421 Msa0855730:CDS 40.0%
!! CACTTGTTATCTGGTTTGCA+TGG + chr5_4:49588440-49588459 None:intergenic 40.0%
! GAGCTATACTCTGAAAGAAG+GGG - chr5_4:49588477-49588496 Msa0855730:CDS 40.0%
GACAAGGGATCATGGAAATT+GGG - chr5_4:49588593-49588612 Msa0855730:CDS 40.0%
! TTTTGTGTACCTTGGATGGA+GGG + chr5_4:49588695-49588714 None:intergenic 40.0%
! TTTTTGTGTACCTTGGATGG+AGG + chr5_4:49588696-49588715 None:intergenic 40.0%
TACGTGTTTGTTCTCACGTT+TGG - chr5_4:49588772-49588791 Msa0855730:intron 40.0%
TGTTTGTTCTCACGTTTGGT+TGG - chr5_4:49588776-49588795 Msa0855730:intron 40.0%
GTTTGTTCTCACGTTTGGTT+GGG - chr5_4:49588777-49588796 Msa0855730:intron 40.0%
AGTTGAACCTAGGACAAGTT+GGG - chr5_4:49589026-49589045 Msa0855730:intron 40.0%
! ATGGCCAAAGCTAAGGTTTT+AGG + chr5_4:49589175-49589194 None:intergenic 40.0%
!! AAACCTTAGCTTTGGCCATT+TGG - chr5_4:49589176-49589195 Msa0855730:CDS 40.0%
ATATTGCACTAGAGTGTGCA+AGG - chr5_4:49589413-49589432 Msa0855730:intron 40.0%
TAGGTTTACTATGCCTCCAT+TGG - chr5_4:49589444-49589463 Msa0855730:intron 40.0%
! ACATGAGGTATTCCAACTTG+AGG + chr5_4:49589484-49589503 None:intergenic 40.0%
ATACCTCATGTGACACAACA+AGG - chr5_4:49589493-49589512 Msa0855730:intron 40.0%
GTCCAGTTATTTACAAGCCT+TGG - chr5_4:49589588-49589607 Msa0855730:intron 40.0%
CATGAATGATATGAGCTCCA+TGG - chr5_4:49589678-49589697 Msa0855730:intron 40.0%
TCTAGAGGATCAAGAGTCAA+AGG - chr5_4:49589756-49589775 Msa0855730:intron 40.0%
GGATGGTAGAGAATTTGAGA+TGG - chr5_4:49589785-49589804 Msa0855730:intron 40.0%
AGCACAAAATGTTGTCCCAA+TGG - chr5_4:49589996-49590015 Msa0855730:intron 40.0%
ACAAAATGTTGTCCCAATGG+AGG - chr5_4:49589999-49590018 Msa0855730:intron 40.0%
CATTGTGTTCCCTTGATGTT+TGG + chr5_4:49590038-49590057 None:intergenic 40.0%
CAAACATCAAGGGAACACAA+TGG - chr5_4:49590036-49590055 Msa0855730:intron 40.0%
TCCGGTACCTAACAAAATGA+TGG - chr5_4:49590418-49590437 Msa0855730:intron 40.0%
TCATGGGGATTCATCAATGA+TGG - chr5_4:49590513-49590532 Msa0855730:intron 40.0%
!! TCCAAGCTTTGAGATCATTG+AGG - chr5_4:49590590-49590609 Msa0855730:intron 40.0%
TCCTCAATGATCTCAAAGCT+TGG + chr5_4:49590594-49590613 None:intergenic 40.0%
GTGTTTGTGAAGGAACAACT+TGG + chr5_4:49590677-49590696 None:intergenic 40.0%
AAGTTCAAGGCCTATGTGAT+GGG - chr5_4:49590798-49590817 Msa0855730:intron 40.0%
GATGCATCGTGTTTATTTGG+AGG - chr5_4:49590890-49590909 Msa0855730:intron 40.0%
GGAATGAGTCAAAAGAGGTT+TGG - chr5_4:49590991-49591010 Msa0855730:CDS 40.0%
GTTGGTGTAAAATGTGAGAG+AGG - chr5_4:49591017-49591036 Msa0855730:CDS 40.0%
ATGTGAGAGAGGATTAAGTG+TGG - chr5_4:49591028-49591047 Msa0855730:CDS 40.0%
! AGGATTAAGTGTGGTCTTGA+AGG - chr5_4:49591037-49591056 Msa0855730:CDS 40.0%
! AGTGTGGTCTTGAAGGAAAT+AGG - chr5_4:49591044-49591063 Msa0855730:CDS 40.0%
! GGTACAAAGCGCCAAAAATA+TGG + chr5_4:49591081-49591100 None:intergenic 40.0%
AAACCTGGAGGCAATGAAAC+AGG + chr5_4:49585905-49585924 None:intergenic 45.0%
TTTCATTGCCTCCAGGTTTC+AGG - chr5_4:49585906-49585925 Msa0855730:CDS 45.0%
GCAACAAGTTCTTCATCCGT+AGG + chr5_4:49585938-49585957 None:intergenic 45.0%
AAATTACCTGGCAAGTCCCA+CGG + chr5_4:49586040-49586059 None:intergenic 45.0%
CTTTCATTGGGTCCCTGTTA+AGG + chr5_4:49586834-49586853 None:intergenic 45.0%
CCTAAAGCCTAAAGGTGAAG+GGG + chr5_4:49587067-49587086 None:intergenic 45.0%
TACCTGGGAATGATATGGAG+TGG - chr5_4:49587677-49587696 Msa0855730:intron 45.0%
TACCACTCCATATCATTCCC+AGG + chr5_4:49587682-49587701 None:intergenic 45.0%
ACGAATCGTGCAACCAAATC+TGG - chr5_4:49587745-49587764 Msa0855730:intron 45.0%
CGAATCGTGCAACCAAATCT+GGG - chr5_4:49587746-49587765 Msa0855730:intron 45.0%
GTGCAACCAAATCTGGGTAT+TGG - chr5_4:49587752-49587771 Msa0855730:intron 45.0%
TGCCTTCCAATACCCAGATT+TGG + chr5_4:49587761-49587780 None:intergenic 45.0%
AATTCTCAAGCTCGAGCAGT+AGG - chr5_4:49587802-49587821 Msa0855730:intron 45.0%
ATTCTCAAGCTCGAGCAGTA+GGG - chr5_4:49587803-49587822 Msa0855730:intron 45.0%
CAATTTGTACGAGAGCCATG+GGG + chr5_4:49587865-49587884 None:intergenic 45.0%
CCAATTTGTACGAGAGCCAT+GGG + chr5_4:49587866-49587885 None:intergenic 45.0%
CCATGGCTCTCGTACAAATT+GGG - chr5_4:49587864-49587883 Msa0855730:intron 45.0%
! AAACTCGGTTGGTCAGTTGA+AGG + chr5_4:49588053-49588072 None:intergenic 45.0%
! CAAAGAGCATATGCATCCTG+AGG + chr5_4:49588351-49588370 None:intergenic 45.0%
GTGATTGTGCCAAAAGTTGG+AGG - chr5_4:49588393-49588412 Msa0855730:CDS 45.0%
AATGGTACGACAAGGGATCA+TGG - chr5_4:49588585-49588604 Msa0855730:CDS 45.0%
CGACAAGGGATCATGGAAAT+TGG - chr5_4:49588592-49588611 Msa0855730:CDS 45.0%
! CTTGGATGGAGGGTATGTTA+TGG + chr5_4:49588685-49588704 None:intergenic 45.0%
CATAACATACCCTCCATCCA+AGG - chr5_4:49588683-49588702 Msa0855730:intron 45.0%
ACATTCAAGCTTCTTGCGTG+CGG + chr5_4:49588808-49588827 None:intergenic 45.0%
AATTGCGGTGAAAACTGCCT+TGG - chr5_4:49588840-49588859 Msa0855730:intron 45.0%
ATTGCGGTGAAAACTGCCTT+GGG - chr5_4:49588841-49588860 Msa0855730:intron 45.0%
TATGCAATTATCGCGTCCCA+AGG + chr5_4:49588860-49588879 None:intergenic 45.0%
TGGGACGCGATAATTGCATA+TGG - chr5_4:49588860-49588879 Msa0855730:intron 45.0%
GGGACGCGATAATTGCATAT+GGG - chr5_4:49588861-49588880 Msa0855730:intron 45.0%
GAGTTGAACCTAGGACAAGT+TGG - chr5_4:49589025-49589044 Msa0855730:intron 45.0%
GTTGAACCTAGGACAAGTTG+GGG - chr5_4:49589027-49589046 Msa0855730:intron 45.0%
GAGGCCTAAAACCTTAGCTT+TGG - chr5_4:49589168-49589187 Msa0855730:CDS 45.0%
TCTTAGGCGAGACTTATGCA+CGG + chr5_4:49589214-49589233 None:intergenic 45.0%
AGTGTGCAAGGATGCAACAT+AGG - chr5_4:49589425-49589444 Msa0855730:intron 45.0%
GTTTACTATGCCTCCATTGG+AGG - chr5_4:49589447-49589466 Msa0855730:intron 45.0%
GTGGAGGAATTTCCTCAAGT+TGG - chr5_4:49589469-49589488 Msa0855730:intron 45.0%
! CTTCCTTGTTGTGTCACATG+AGG + chr5_4:49589499-49589518 None:intergenic 45.0%
ATCAAGAGTCAAAGGCCAAG+CGG - chr5_4:49589764-49589783 Msa0855730:intron 45.0%
CAAATTCTCTACCATCCGCT+TGG + chr5_4:49589782-49589801 None:intergenic 45.0%
GAAGTTCAAGGCCTATGTGA+TGG - chr5_4:49590797-49590816 Msa0855730:intron 45.0%
AGTTCAAGGCCTATGTGATG+GGG - chr5_4:49590799-49590818 Msa0855730:intron 45.0%
GTTCCATTTCCCCATCACAT+AGG + chr5_4:49590811-49590830 None:intergenic 45.0%
! TTTTGGCGCTTTGTACCACA+TGG - chr5_4:49591084-49591103 Msa0855730:CDS 45.0%
TTTGGCGCTTTGTACCACAT+GGG - chr5_4:49591085-49591104 Msa0855730:CDS 45.0%
!! AAAAAAAAACTAAATAAATT+TGG + chr5_4:49586287-49586306 None:intergenic 5.0%
!!! TTTTTTTATATAAAATTTTG+AGG - chr5_4:49589149-49589168 Msa0855730:CDS 5.0%
!!! AATAGTATTTTTATTTTTTT+CGG - chr5_4:49589842-49589861 Msa0855730:intron 5.0%
!! AGGTTTCAGGTTCCACCCTA+CGG - chr5_4:49585919-49585938 Msa0855730:CDS 50.0%
CAAGTTCTTCATCCGTAGGG+TGG + chr5_4:49585934-49585953 None:intergenic 50.0%
AGATGGTCCCCTTCACCTTT+AGG - chr5_4:49587057-49587076 Msa0855730:intron 50.0%
CCCCTTCACCTTTAGGCTTT+AGG - chr5_4:49587064-49587083 Msa0855730:intron 50.0%
ATGGGAGTGGCTCTTCTCTT+TGG + chr5_4:49587349-49587368 None:intergenic 50.0%
TCGGGTACTTCCTATCACGA+GGG + chr5_4:49587714-49587733 None:intergenic 50.0%
TTCGGGTACTTCCTATCACG+AGG + chr5_4:49587715-49587734 None:intergenic 50.0%
!! CGTGATAGGAAGTACCCGAA+TGG - chr5_4:49587715-49587734 Msa0855730:intron 50.0%
!! TCTGGGTATTGGAAGGCAAC+CGG - chr5_4:49587763-49587782 Msa0855730:intron 50.0%
TTCTCAAGCTCGAGCAGTAG+GGG - chr5_4:49587804-49587823 Msa0855730:intron 50.0%
CCCATGGCTCTCGTACAAAT+TGG - chr5_4:49587863-49587882 Msa0855730:intron 50.0%
CCCAATTTGTACGAGAGCCA+TGG + chr5_4:49587867-49587886 None:intergenic 50.0%
! TGAAACCACTCCTAGCTTGC+AGG - chr5_4:49587921-49587940 Msa0855730:intron 50.0%
AGAAGGAGAACCTGCAAGCT+AGG + chr5_4:49587934-49587953 None:intergenic 50.0%
! GGCTTGCTCACCTCACAATA+TGG - chr5_4:49588539-49588558 Msa0855730:CDS 50.0%
TCATCACCCCAACTTGTCCT+AGG + chr5_4:49589036-49589055 None:intergenic 50.0%
! TAGGACAAGTTGGGGTGATG+AGG - chr5_4:49589035-49589054 Msa0855730:intron 50.0%
GGACCAAATGGCCAAAGCTA+AGG + chr5_4:49589182-49589201 None:intergenic 50.0%
TACTATGCCTCCATTGGAGG+TGG - chr5_4:49589450-49589469 Msa0855730:intron 50.0%
AATTCCTCCACCTCCAATGG+AGG + chr5_4:49589460-49589479 None:intergenic 50.0%
GGAAATTCCTCCACCTCCAA+TGG + chr5_4:49589463-49589482 None:intergenic 50.0%
AGGGAACACAATGGCATGCA+AGG - chr5_4:49590045-49590064 Msa0855730:intron 50.0%
! AGGCCTATGTGATGGGGAAA+TGG - chr5_4:49590805-49590824 Msa0855730:intron 50.0%
GCACCTGTTTCATTGCCTCC+AGG - chr5_4:49585899-49585918 Msa0855730:CDS 55.0%
GTAGGGTGGAACCTGAAACC+TGG + chr5_4:49585920-49585939 None:intergenic 55.0%
!! CTGGGTATTGGAAGGCAACC+GGG - chr5_4:49587764-49587783 Msa0855730:intron 55.0%
GTATTGGAAGGCAACCGGGA+AGG - chr5_4:49587768-49587787 Msa0855730:intron 55.0%
!! TATCGAGGAAGAGCACCCCA+TGG - chr5_4:49587847-49587866 Msa0855730:intron 55.0%
GAGAACCTGCAAGCTAGGAG+TGG + chr5_4:49587929-49587948 None:intergenic 55.0%
TTCTCACGTTTGGTTGGGCG+TGG - chr5_4:49588782-49588801 Msa0855730:intron 55.0%
ACTTATGCACGGACGGTGCA+AGG + chr5_4:49589203-49589222 None:intergenic 55.0%
AGGCGAGACTTATGCACGGA+CGG + chr5_4:49589210-49589229 None:intergenic 55.0%
GTGTCTAAGCTTGGGGTCCA+AGG + chr5_4:49589312-49589331 None:intergenic 55.0%
TATGCCTCCATTGGAGGTGG+AGG - chr5_4:49589453-49589472 Msa0855730:intron 55.0%
AGAGTCAAAGGCCAAGCGGA+TGG - chr5_4:49589768-49589787 Msa0855730:intron 55.0%
!! TGTACCACATGGGCTAGCCA+TGG - chr5_4:49591095-49591114 Msa0855730:CDS 55.0%
! TTAGCCATGGCTAGCCCATG+TGG + chr5_4:49591102-49591121 None:intergenic 55.0%
GGGTGGAACCTGAAACCTGG+AGG + chr5_4:49585917-49585936 None:intergenic 60.0%
TGTGAACCGTGGGACTTGCC+AGG - chr5_4:49586031-49586050 Msa0855730:CDS 60.0%
CGGACGGTGCAAGGACCAAA+TGG + chr5_4:49589194-49589213 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 49585890 49591121 49585890 ID=Msa0855730;Name=Msa0855730
chr5_4 mRNA 49585890 49591121 49585890 ID=Msa0855730-mRNA-1;Parent=Msa0855730;Name=Msa0855730-mRNA-1;_AED=0.06;_eAED=0.06;_QI=6|1|0.83|1|1|1|6|0|651
chr5_4 exon 49585890 49586554 49585890 ID=Msa0855730-mRNA-1:exon:15574;Parent=Msa0855730-mRNA-1
chr5_4 exon 49586945 49587020 49586945 ID=Msa0855730-mRNA-1:exon:15573;Parent=Msa0855730-mRNA-1
chr5_4 exon 49587174 49587602 49587174 ID=Msa0855730-mRNA-1:exon:15572;Parent=Msa0855730-mRNA-1
chr5_4 exon 49588307 49588657 49588307 ID=Msa0855730-mRNA-1:exon:15571;Parent=Msa0855730-mRNA-1
chr5_4 exon 49589069 49589346 49589069 ID=Msa0855730-mRNA-1:exon:15570;Parent=Msa0855730-mRNA-1
chr5_4 exon 49590959 49591121 49590959 ID=Msa0855730-mRNA-1:exon:15569;Parent=Msa0855730-mRNA-1
chr5_4 five_prime_UTR 49591116 49591121 49591116 ID=Msa0855730-mRNA-1:five_prime_utr;Parent=Msa0855730-mRNA-1
chr5_4 CDS 49590959 49591115 49590959 ID=Msa0855730-mRNA-1:cds;Parent=Msa0855730-mRNA-1
chr5_4 CDS 49589069 49589346 49589069 ID=Msa0855730-mRNA-1:cds;Parent=Msa0855730-mRNA-1
chr5_4 CDS 49588307 49588657 49588307 ID=Msa0855730-mRNA-1:cds;Parent=Msa0855730-mRNA-1
chr5_4 CDS 49587174 49587602 49587174 ID=Msa0855730-mRNA-1:cds;Parent=Msa0855730-mRNA-1
chr5_4 CDS 49586945 49587020 49586945 ID=Msa0855730-mRNA-1:cds;Parent=Msa0855730-mRNA-1
chr5_4 CDS 49585890 49586554 49585890 ID=Msa0855730-mRNA-1:cds;Parent=Msa0855730-mRNA-1
Gene Sequence

>Msa0855730

ATGGCACCTGTTTCATTGCCTCCAGGTTTCAGGTTCCACCCTACGGATGAAGAACTTGTTGCTTATTATCTAAATAGGAAGATTAATGGCCATAAGATTGAATTGGAGATCATAGCTGAAGTTGATCTCTATAAGTGTGAACCGTGGGACTTGCCAGGGAAATCATTATTACCTGGGAATGATATGGAGTGGTATTTCTTTAGCCCTCGTGATAGGAAGTACCCGAATGGATCTAGAACGAATCGTGCAACCAAATCTGGGTATTGGAAGGCAACCGGGAAGGATCGAAAAGTGAATTCTCAAGCTCGAGCAGTAGGGGTGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCACCCCATGGCTCTCGTACAAATTGGGTTATGCATGAATATCGTCTTGATGAGAGGGAATGTGAAACCACTCCTAGCTTGCAGGATGCATATGCTCTTTGCCGTGTGATCAAGAAGAGTACAGTGATTGTGCCAAAAGTTGGAGGACAATATGGTAATATTACAGGCCATGCAAACCAGATAACAAGTGACCAATCAACAAACGTTGAGCTATACTCTGAAAGAAGGGGTGAAAATTTAGCTAGTTCAAATTATTTGATGCAAATGAAGGCTTGCTCACCTCACAATATGGTAAATGAGACTTCTCTCAATATCAATGGTACGACAAGGGATCATGGAAATTGGGCGCAATTCTCATCTGAAGACCCATTATTTAGTCTTCCAACTACTTCTTCATTTACTAATTATGGAGCCATAACATACCCTCCATCCAAGGTGGATATTGCACTAGAGTGTGCAAGGATGCAACATAGGTTTACTATGCCTCCATTGGAGGTGGAGGAATTTCCTCAAGTTGGAATACCTCATGTGACACAACAAGGAAGCAGAATTGCAAATGATATCTTGCAGGGAATTCTTTCACTTAATCATGCTTCTCAGGGATTGATGAATCAGTCCAGTTATTTACAAGCCTTGGATGACAATGAAAATTATGCTCCTTATGAAGATGATTTTACTTTCATGGTTGACACTAACTACAATCACATGAATGATATGAGCTCCATGGGATATGTTGACAAAACTTGGGAAGATTTGAACACAAGATCTATAGAGATAGGTGATCTAGAGGATCAAGAGTCAAAGGCCAAGCGGATGGTAGAGAATTTGAGATGGATTGGAATGCCAAGAGAAGATTTTGAAAAGATGGAAGCACAAAATGTTGTCCCAATGGAGGATATTTCATGCTACCAAACATCAAGGGAACACAATGGCATGCAAGAATGTAAGCAGCACAATAACAACCTTGAACAAAATGACAATGATATCAGTGAATTCTCATGGGGATTCATCAATGATGGTGACCCCAATGAGAATTTTGTAGAAGATGGTAAAATGGACCATTACTCAAATTCTCCAAGCTTTGAGATCATTGAGGAAATAAAGGTTAGTCATAGAATGTTGGTTTCAACTCAACAAGTAGCCATGACATTATTTCACCAAGTTGTTCCTTCACAAACACTTCAAATTCAACTCAATCCAATGATGCCAAACAATAAACACTCTATAGAGAACGTAGATGCAAAGATGATGATAATGGAGAATGGAGGATCTTTCTTCATGAAGTTCAAGGCCTATGTGATGGGGAAATGGAACCTATTCAACCCATCAAAGAAAATAGCAAGTTTGGTTGTATTTGTATTTGCACTTCTTTTGATGCATCGTGTTTATTTGGAGGAAGAAGTAGAAATCTGCAAACCAAAACCAAAAAAGATGAAAGAGAAAAGAATGAGAGAATCACATGAGAGAGTCAAATGGAATGAGTCAAAAGAGGTTTGGTTTGTTGGTGTAAAATGTGAGAGAGGATTAAGTGTGGTCTTGAAGGAAATAGGCATTTTCTTCACCATATTTTTGGCGCTTTGTACCACATGGGCTAGCCATGGCTAA
Protein sequence

>Msa0855730

MAPVSLPPGFRFHPTDEELVAYYLNRKINGHKIELEIIAEVDLYKCEPWDLPGKSLLPGNDMEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQARAVGVKKTLVYYRGRAPHGSRTNWVMHEYRLDERECETTPSLQDAYALCRVIKKSTVIVPKVGGQYGNITGHANQITSDQSTNVELYSERRGENLASSNYLMQMKACSPHNMVNETSLNINGTTRDHGNWAQFSSEDPLFSLPTTSSFTNYGAITYPPSKVDIALECARMQHRFTMPPLEVEEFPQVGIPHVTQQGSRIANDILQGILSLNHASQGLMNQSSYLQALDDNENYAPYEDDFTFMVDTNYNHMNDMSSMGYVDKTWEDLNTRSIEIGDLEDQESKAKRMVENLRWIGMPREDFEKMEAQNVVPMEDISCYQTSREHNGMQECKQHNNNLEQNDNDISEFSWGFINDGDPNENFVEDGKMDHYSNSPSFEIIEEIKVSHRMLVSTQQVAMTLFHQVVPSQTLQIQLNPMMPNNKHSIENVDAKMMIMENGGSFFMKFKAYVMGKWNLFNPSKKIASLVVFVFALLLMHRVYLEEEVEICKPKPKKMKEKRMRESHERVKWNESKEVWFVGVKCERGLSVVLKEIGIFFTIFLALCTTWASHG*