AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0738790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0738790 MtrunA17_Chr5g0438411 41.525 118 35 3 6 93 20 133 2.70e-12 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 29 sgRNAs with CRISPR-Local

Find 166 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATTTCAAAAGCGATATT+TGG 0.205139 5_1:-56706977 None:intergenic
AACTTCCTCTAATACCAAAA+AGG 0.257032 5_1:+56707112 Msa0738790:CDS
GTTGTTGCGGTAATACTAAT+AGG 0.278021 5_1:+56708346 Msa0738790:CDS
CAACCATAGCGACAATTACT+AGG 0.423807 5_1:-56708327 None:intergenic
TTGTTGCGGTAATACTAATA+GGG 0.426730 5_1:+56708347 Msa0738790:CDS
TTAAATTAAATATTTGTGAC+TGG 0.427118 5_1:+56708571 Msa0738790:three_prime_UTR
CGCAAACCTCGGCTGCAAGC+TGG 0.431093 5_1:-56708276 None:intergenic
ATCCTTAGGTGTATTTGCTA+TGG 0.465040 5_1:+56707046 Msa0738790:exon
GAAGGATGATAAAACTAGTA+AGG 0.485446 5_1:-56706950 None:intergenic
TAAATTAAATATTTGTGACT+GGG 0.496350 5_1:+56708572 Msa0738790:three_prime_UTR
AAAATTCACACACACAAGTC+GGG 0.508614 5_1:-56708603 None:intergenic
TTTCGCAAGGAGTGTCAGCT+AGG 0.511097 5_1:+56707078 Msa0738790:CDS
AGCTATCCAGCTTGCAGCCG+AGG 0.528770 5_1:+56708270 Msa0738790:CDS
TTGAAATATCGATTTGTGAA+GGG 0.537847 5_1:+56706990 Msa0738790:five_prime_UTR
CCTCCTAGTAATTGTCGCTA+TGG 0.538551 5_1:+56708324 Msa0738790:CDS
AAAGCGATATTTGGTTGTGA+AGG 0.545485 5_1:-56706968 None:intergenic
ATGGTTCTTCTTATTTCGCA+AGG 0.547110 5_1:+56707065 Msa0738790:CDS
GAAAATTCACACACACAAGT+CGG 0.551371 5_1:-56708604 None:intergenic
GATAAATGCTGCTCATATGC+TGG 0.553499 5_1:+56708390 Msa0738790:CDS
TTTGAAATATCGATTTGTGA+AGG 0.554963 5_1:+56706989 Msa0738790:five_prime_UTR
AGGGTTATACTCTTGTACAA+TGG 0.561105 5_1:+56707009 Msa0738790:five_prime_UTR
AACCATAGCAAATACACCTA+AGG 0.565084 5_1:-56707048 None:intergenic
AAATTAAATATTTGTGACTG+GGG 0.570951 5_1:+56708573 Msa0738790:three_prime_UTR
TGCAGCCGAGGTTTGCGCGG+TGG 0.578051 5_1:+56708282 Msa0738790:CDS
TTCGCAAGGAGTGTCAGCTA+GGG 0.586795 5_1:+56707079 Msa0738790:CDS
GCTTGCAGCCGAGGTTTGCG+CGG 0.588619 5_1:+56708279 Msa0738790:CDS
TACTACCACCGCGCAAACCT+CGG 0.591558 5_1:-56708287 None:intergenic
AATTGTCGCTATGGTTGTTG+CGG 0.602636 5_1:+56708333 Msa0738790:CDS
CCATAGCGACAATTACTAGG+AGG 0.681363 5_1:-56708324 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAAAAAAAAAATTTGT+TGG - chr5_1:56707462-56707481 None:intergenic 10.0%
!!! AAAATTATTGTTTTTTTAAG+TGG - chr5_1:56707814-56707833 None:intergenic 10.0%
!! ATTTATAAAGAATATATCAA+AGG - chr5_1:56708029-56708048 None:intergenic 10.0%
!! TTGATATATTCTTTATAAAT+TGG + chr5_1:56708029-56708048 Msa0738790:intron 10.0%
!! ATAACAAAAAAAAAATTTGT+TGG - chr5_1:56707462-56707481 None:intergenic 10.0%
!!! AAAATTATTGTTTTTTTAAG+TGG - chr5_1:56707814-56707833 None:intergenic 10.0%
!! ATTTATAAAGAATATATCAA+AGG - chr5_1:56708029-56708048 None:intergenic 10.0%
!! TTGATATATTCTTTATAAAT+TGG + chr5_1:56708029-56708048 Msa0738790:intron 10.0%
!! AGTAAAGTAATGAATTTATA+GGG + chr5_1:56707548-56707567 Msa0738790:intron 15.0%
!!! AAATTTGCTAAAAAAATGTT+AGG - chr5_1:56707601-56707620 None:intergenic 15.0%
!!! ATGTTAACACTAATAATTTT+TGG - chr5_1:56707785-56707804 None:intergenic 15.0%
!! AAACAAAATATTAATCAAAC+AGG - chr5_1:56708220-56708239 None:intergenic 15.0%
!!! AACAATTTTGACATTTTTAT+CGG - chr5_1:56708553-56708572 None:intergenic 15.0%
!! TTAAATTAAATATTTGTGAC+TGG + chr5_1:56708571-56708590 Msa0738790:three_prime_UTR 15.0%
!! TAAATTAAATATTTGTGACT+GGG + chr5_1:56708572-56708591 Msa0738790:three_prime_UTR 15.0%
!! AGTAAAGTAATGAATTTATA+GGG + chr5_1:56707548-56707567 Msa0738790:intron 15.0%
!!! AAATTTGCTAAAAAAATGTT+AGG - chr5_1:56707601-56707620 None:intergenic 15.0%
!!! ATGTTAACACTAATAATTTT+TGG - chr5_1:56707785-56707804 None:intergenic 15.0%
!! AAACAAAATATTAATCAAAC+AGG - chr5_1:56708220-56708239 None:intergenic 15.0%
!!! AACAATTTTGACATTTTTAT+CGG - chr5_1:56708553-56708572 None:intergenic 15.0%
!! TTAAATTAAATATTTGTGAC+TGG + chr5_1:56708571-56708590 Msa0738790:three_prime_UTR 15.0%
!! TAAATTAAATATTTGTGACT+GGG + chr5_1:56708572-56708591 Msa0738790:three_prime_UTR 15.0%
!! TTACTTTACTGATAGATTAT+GGG - chr5_1:56707538-56707557 None:intergenic 20.0%
!! ATTACTTTACTGATAGATTA+TGG - chr5_1:56707539-56707558 None:intergenic 20.0%
!! CAGTAAAGTAATGAATTTAT+AGG + chr5_1:56707547-56707566 Msa0738790:intron 20.0%
!! GTAAAGTAATGAATTTATAG+GGG + chr5_1:56707549-56707568 Msa0738790:intron 20.0%
!! TATTATGGAATTCTTACAAA+AGG - chr5_1:56707707-56707726 None:intergenic 20.0%
!! TATTTCTTGTGTGTTTATTA+TGG - chr5_1:56707722-56707741 None:intergenic 20.0%
!!! ACATTTGAACTGTTTTTTTA+AGG + chr5_1:56707742-56707761 Msa0738790:intron 20.0%
!!! CATTTGAACTGTTTTTTTAA+GGG + chr5_1:56707743-56707762 Msa0738790:intron 20.0%
!! ATAATTAAAAGACGAGAAAA+TGG - chr5_1:56707914-56707933 None:intergenic 20.0%
!! ATAAAGAATATATCAAAGGT+AGG - chr5_1:56708025-56708044 None:intergenic 20.0%
!! AAATTAAATATTTGTGACTG+GGG + chr5_1:56708573-56708592 Msa0738790:three_prime_UTR 20.0%
!! TTACTTTACTGATAGATTAT+GGG - chr5_1:56707538-56707557 None:intergenic 20.0%
!! ATTACTTTACTGATAGATTA+TGG - chr5_1:56707539-56707558 None:intergenic 20.0%
!! CAGTAAAGTAATGAATTTAT+AGG + chr5_1:56707547-56707566 Msa0738790:intron 20.0%
!! GTAAAGTAATGAATTTATAG+GGG + chr5_1:56707549-56707568 Msa0738790:intron 20.0%
!! TATTATGGAATTCTTACAAA+AGG - chr5_1:56707707-56707726 None:intergenic 20.0%
!! TATTTCTTGTGTGTTTATTA+TGG - chr5_1:56707722-56707741 None:intergenic 20.0%
!!! ACATTTGAACTGTTTTTTTA+AGG + chr5_1:56707742-56707761 Msa0738790:intron 20.0%
!!! CATTTGAACTGTTTTTTTAA+GGG + chr5_1:56707743-56707762 Msa0738790:intron 20.0%
!! ATAATTAAAAGACGAGAAAA+TGG - chr5_1:56707914-56707933 None:intergenic 20.0%
!! ATAAAGAATATATCAAAGGT+AGG - chr5_1:56708025-56708044 None:intergenic 20.0%
!! AAATTAAATATTTGTGACTG+GGG + chr5_1:56708573-56708592 Msa0738790:three_prime_UTR 20.0%
! GATATTTCAAAAGCGATATT+TGG - chr5_1:56706980-56706999 None:intergenic 25.0%
!!! TTTGAAATATCGATTTGTGA+AGG + chr5_1:56706989-56707008 Msa0738790:five_prime_UTR 25.0%
!!! TTGAAATATCGATTTGTGAA+GGG + chr5_1:56706990-56707009 Msa0738790:five_prime_UTR 25.0%
! ATTCGAAAAAAGTAATCCTT+AGG + chr5_1:56707032-56707051 Msa0738790:five_prime_UTR 25.0%
!!! TAGGTGTTACAATTTTAACT+CGG - chr5_1:56707287-56707306 None:intergenic 25.0%
! CTTACAAAAGGTTTAAAAGT+GGG - chr5_1:56707695-56707714 None:intergenic 25.0%
! TCTTACAAAAGGTTTAAAAG+TGG - chr5_1:56707696-56707715 None:intergenic 25.0%
!! AGAAAATGGTTTGTAAGAAT+GGG - chr5_1:56707900-56707919 None:intergenic 25.0%
!! TGACATCTTTTTCTTTATCA+TGG - chr5_1:56707972-56707991 None:intergenic 25.0%
! AATATATCAAAGGTAGGATT+AGG - chr5_1:56708019-56708038 None:intergenic 25.0%
! GATATTTCAAAAGCGATATT+TGG - chr5_1:56706980-56706999 None:intergenic 25.0%
!!! TTTGAAATATCGATTTGTGA+AGG + chr5_1:56706989-56707008 Msa0738790:five_prime_UTR 25.0%
!!! TTGAAATATCGATTTGTGAA+GGG + chr5_1:56706990-56707009 Msa0738790:five_prime_UTR 25.0%
! ATTCGAAAAAAGTAATCCTT+AGG + chr5_1:56707032-56707051 Msa0738790:five_prime_UTR 25.0%
!!! TAGGTGTTACAATTTTAACT+CGG - chr5_1:56707287-56707306 None:intergenic 25.0%
! CTTACAAAAGGTTTAAAAGT+GGG - chr5_1:56707695-56707714 None:intergenic 25.0%
! TCTTACAAAAGGTTTAAAAG+TGG - chr5_1:56707696-56707715 None:intergenic 25.0%
!! AGAAAATGGTTTGTAAGAAT+GGG - chr5_1:56707900-56707919 None:intergenic 25.0%
!! TGACATCTTTTTCTTTATCA+TGG - chr5_1:56707972-56707991 None:intergenic 25.0%
! AATATATCAAAGGTAGGATT+AGG - chr5_1:56708019-56708038 None:intergenic 25.0%
GAAGGATGATAAAACTAGTA+AGG - chr5_1:56706953-56706972 None:intergenic 30.0%
AACTTCCTCTAATACCAAAA+AGG + chr5_1:56707112-56707131 Msa0738790:CDS 30.0%
ACTTCCTCTAATACCAAAAA+GGG + chr5_1:56707113-56707132 Msa0738790:CDS 30.0%
! ATTATATTGCTCACCCTTTT+TGG - chr5_1:56707129-56707148 None:intergenic 30.0%
! CTTTTAACCCGTAAAATACA+GGG + chr5_1:56707234-56707253 Msa0738790:intron 30.0%
ACCTAACTTTAACTCTTGAT+GGG + chr5_1:56707302-56707321 Msa0738790:intron 30.0%
TTTATAGGGGACATCTAATA+TGG + chr5_1:56707562-56707581 Msa0738790:intron 30.0%
! GAGAAAATGGTTTGTAAGAA+TGG - chr5_1:56707901-56707920 None:intergenic 30.0%
TTGGATAGCTTAGATTTAAG+AGG + chr5_1:56708048-56708067 Msa0738790:intron 30.0%
TTGTTGCGGTAATACTAATA+GGG + chr5_1:56708347-56708366 Msa0738790:CDS 30.0%
GAAGGATGATAAAACTAGTA+AGG - chr5_1:56706953-56706972 None:intergenic 30.0%
AACTTCCTCTAATACCAAAA+AGG + chr5_1:56707112-56707131 Msa0738790:CDS 30.0%
ACTTCCTCTAATACCAAAAA+GGG + chr5_1:56707113-56707132 Msa0738790:CDS 30.0%
! ATTATATTGCTCACCCTTTT+TGG - chr5_1:56707129-56707148 None:intergenic 30.0%
! CTTTTAACCCGTAAAATACA+GGG + chr5_1:56707234-56707253 Msa0738790:intron 30.0%
ACCTAACTTTAACTCTTGAT+GGG + chr5_1:56707302-56707321 Msa0738790:intron 30.0%
TTTATAGGGGACATCTAATA+TGG + chr5_1:56707562-56707581 Msa0738790:intron 30.0%
! GAGAAAATGGTTTGTAAGAA+TGG - chr5_1:56707901-56707920 None:intergenic 30.0%
TTGGATAGCTTAGATTTAAG+AGG + chr5_1:56708048-56708067 Msa0738790:intron 30.0%
TTGTTGCGGTAATACTAATA+GGG + chr5_1:56708347-56708366 Msa0738790:CDS 30.0%
AAAGCGATATTTGGTTGTGA+AGG - chr5_1:56706971-56706990 None:intergenic 35.0%
AGGGTTATACTCTTGTACAA+TGG + chr5_1:56707009-56707028 Msa0738790:five_prime_UTR 35.0%
! ATCCTTAGGTGTATTTGCTA+TGG + chr5_1:56707046-56707065 Msa0738790:exon 35.0%
AACCATAGCAAATACACCTA+AGG - chr5_1:56707051-56707070 None:intergenic 35.0%
! ATGGTTCTTCTTATTTCGCA+AGG + chr5_1:56707065-56707084 Msa0738790:CDS 35.0%
GATGTTCACTTAAACGATGT+GGG - chr5_1:56707214-56707233 None:intergenic 35.0%
!! CCTGTATTTTACGGGTTAAA+AGG - chr5_1:56707236-56707255 None:intergenic 35.0%
! CCTTTTAACCCGTAAAATAC+AGG + chr5_1:56707233-56707252 Msa0738790:intron 35.0%
! TCGTTCTACCCTGTATTTTA+CGG - chr5_1:56707245-56707264 None:intergenic 35.0%
AGAACGATGCTATTCAACTT+AGG + chr5_1:56707258-56707277 Msa0738790:intron 35.0%
CACCTAACTTTAACTCTTGA+TGG + chr5_1:56707301-56707320 Msa0738790:intron 35.0%
!!! GTTCTCGAGTGTTTTTTTGT+TGG - chr5_1:56707487-56707506 None:intergenic 35.0%
! TTTTTGGACTGCATCTCATA+TGG - chr5_1:56707769-56707788 None:intergenic 35.0%
ATCATGGTCTAATGAAAGTG+AGG - chr5_1:56707956-56707975 None:intergenic 35.0%
GTTGTTGCGGTAATACTAAT+AGG + chr5_1:56708346-56708365 Msa0738790:CDS 35.0%
AAAATTCACACACACAAGTC+GGG - chr5_1:56708606-56708625 None:intergenic 35.0%
AAAGCGATATTTGGTTGTGA+AGG - chr5_1:56706971-56706990 None:intergenic 35.0%
AGGGTTATACTCTTGTACAA+TGG + chr5_1:56707009-56707028 Msa0738790:five_prime_UTR 35.0%
! ATCCTTAGGTGTATTTGCTA+TGG + chr5_1:56707046-56707065 Msa0738790:exon 35.0%
AACCATAGCAAATACACCTA+AGG - chr5_1:56707051-56707070 None:intergenic 35.0%
! ATGGTTCTTCTTATTTCGCA+AGG + chr5_1:56707065-56707084 Msa0738790:CDS 35.0%
GATGTTCACTTAAACGATGT+GGG - chr5_1:56707214-56707233 None:intergenic 35.0%
!! CCTGTATTTTACGGGTTAAA+AGG - chr5_1:56707236-56707255 None:intergenic 35.0%
! CCTTTTAACCCGTAAAATAC+AGG + chr5_1:56707233-56707252 Msa0738790:intron 35.0%
! TCGTTCTACCCTGTATTTTA+CGG - chr5_1:56707245-56707264 None:intergenic 35.0%
AGAACGATGCTATTCAACTT+AGG + chr5_1:56707258-56707277 Msa0738790:intron 35.0%
CACCTAACTTTAACTCTTGA+TGG + chr5_1:56707301-56707320 Msa0738790:intron 35.0%
!!! GTTCTCGAGTGTTTTTTTGT+TGG - chr5_1:56707487-56707506 None:intergenic 35.0%
! TTTTTGGACTGCATCTCATA+TGG - chr5_1:56707769-56707788 None:intergenic 35.0%
ATCATGGTCTAATGAAAGTG+AGG - chr5_1:56707956-56707975 None:intergenic 35.0%
GTTGTTGCGGTAATACTAAT+AGG + chr5_1:56708346-56708365 Msa0738790:CDS 35.0%
AAAATTCACACACACAAGTC+GGG - chr5_1:56708606-56708625 None:intergenic 35.0%
!! CTCACCCTTTTTGGTATTAG+AGG - chr5_1:56707120-56707139 None:intergenic 40.0%
GGATGTTCACTTAAACGATG+TGG - chr5_1:56707215-56707234 None:intergenic 40.0%
! CGTTCTACCCTGTATTTTAC+GGG - chr5_1:56707244-56707263 None:intergenic 40.0%
GCCCATCAAGAGTTAAAGTT+AGG - chr5_1:56707306-56707325 None:intergenic 40.0%
! AACTTTAACTCTTGATGGGC+TGG + chr5_1:56707306-56707325 Msa0738790:intron 40.0%
GGATTAGGCTTTCTCATCAT+GGG - chr5_1:56708004-56708023 None:intergenic 40.0%
AGGATTAGGCTTTCTCATCA+TGG - chr5_1:56708005-56708024 None:intergenic 40.0%
CAACCATAGCGACAATTACT+AGG - chr5_1:56708330-56708349 None:intergenic 40.0%
AATTGTCGCTATGGTTGTTG+CGG + chr5_1:56708333-56708352 Msa0738790:CDS 40.0%
GATAAATGCTGCTCATATGC+TGG + chr5_1:56708390-56708409 Msa0738790:CDS 40.0%
!! CTCACCCTTTTTGGTATTAG+AGG - chr5_1:56707120-56707139 None:intergenic 40.0%
GGATGTTCACTTAAACGATG+TGG - chr5_1:56707215-56707234 None:intergenic 40.0%
! CGTTCTACCCTGTATTTTAC+GGG - chr5_1:56707244-56707263 None:intergenic 40.0%
GCCCATCAAGAGTTAAAGTT+AGG - chr5_1:56707306-56707325 None:intergenic 40.0%
! AACTTTAACTCTTGATGGGC+TGG + chr5_1:56707306-56707325 Msa0738790:intron 40.0%
GGATTAGGCTTTCTCATCAT+GGG - chr5_1:56708004-56708023 None:intergenic 40.0%
AGGATTAGGCTTTCTCATCA+TGG - chr5_1:56708005-56708024 None:intergenic 40.0%
CAACCATAGCGACAATTACT+AGG - chr5_1:56708330-56708349 None:intergenic 40.0%
AATTGTCGCTATGGTTGTTG+CGG + chr5_1:56708333-56708352 Msa0738790:CDS 40.0%
GATAAATGCTGCTCATATGC+TGG + chr5_1:56708390-56708409 Msa0738790:CDS 40.0%
GACATCTAATATGGACGCAG+AGG + chr5_1:56707571-56707590 Msa0738790:intron 45.0%
CCATAGCGACAATTACTAGG+AGG - chr5_1:56708327-56708346 None:intergenic 45.0%
CCTCCTAGTAATTGTCGCTA+TGG + chr5_1:56708324-56708343 Msa0738790:CDS 45.0%
GACATCTAATATGGACGCAG+AGG + chr5_1:56707571-56707590 Msa0738790:intron 45.0%
CCATAGCGACAATTACTAGG+AGG - chr5_1:56708327-56708346 None:intergenic 45.0%
CCTCCTAGTAATTGTCGCTA+TGG + chr5_1:56708324-56708343 Msa0738790:CDS 45.0%
!!! CAAAATTATATATATATTTT+TGG - chr5_1:56707410-56707429 None:intergenic 5.0%
!!! TTTTAATTTAATTTTACTAT+AGG + chr5_1:56707854-56707873 Msa0738790:intron 5.0%
!!! CAAAATTATATATATATTTT+TGG - chr5_1:56707410-56707429 None:intergenic 5.0%
!!! TTTTAATTTAATTTTACTAT+AGG + chr5_1:56707854-56707873 Msa0738790:intron 5.0%
!! TTTCGCAAGGAGTGTCAGCT+AGG + chr5_1:56707078-56707097 Msa0738790:CDS 50.0%
!! TTCGCAAGGAGTGTCAGCTA+GGG + chr5_1:56707079-56707098 Msa0738790:CDS 50.0%
!! TTTCGCAAGGAGTGTCAGCT+AGG + chr5_1:56707078-56707097 Msa0738790:CDS 50.0%
!! TTCGCAAGGAGTGTCAGCTA+GGG + chr5_1:56707079-56707098 Msa0738790:CDS 50.0%
!! CTCTTGATGGGCTGGCAAGT+TGG + chr5_1:56707314-56707333 Msa0738790:intron 55.0%
!! TGATGGGCTGGCAAGTTGGA+AGG + chr5_1:56707318-56707337 Msa0738790:intron 55.0%
TACTACCACCGCGCAAACCT+CGG - chr5_1:56708290-56708309 None:intergenic 55.0%
!! CTCTTGATGGGCTGGCAAGT+TGG + chr5_1:56707314-56707333 Msa0738790:intron 55.0%
!! TGATGGGCTGGCAAGTTGGA+AGG + chr5_1:56707318-56707337 Msa0738790:intron 55.0%
TACTACCACCGCGCAAACCT+CGG - chr5_1:56708290-56708309 None:intergenic 55.0%
! GGGCTGGCAAGTTGGAAGGT+CGG + chr5_1:56707322-56707341 Msa0738790:intron 60.0%
AGCTATCCAGCTTGCAGCCG+AGG + chr5_1:56708270-56708289 Msa0738790:CDS 60.0%
! GGGCTGGCAAGTTGGAAGGT+CGG + chr5_1:56707322-56707341 Msa0738790:intron 60.0%
AGCTATCCAGCTTGCAGCCG+AGG + chr5_1:56708270-56708289 Msa0738790:CDS 60.0%
CGCAAACCTCGGCTGCAAGC+TGG - chr5_1:56708279-56708298 None:intergenic 65.0%
GCTTGCAGCCGAGGTTTGCG+CGG + chr5_1:56708279-56708298 Msa0738790:CDS 65.0%
CGCAAACCTCGGCTGCAAGC+TGG - chr5_1:56708279-56708298 None:intergenic 65.0%
GCTTGCAGCCGAGGTTTGCG+CGG + chr5_1:56708279-56708298 Msa0738790:CDS 65.0%
TGCAGCCGAGGTTTGCGCGG+TGG + chr5_1:56708282-56708301 Msa0738790:CDS 70.0%
TGCAGCCGAGGTTTGCGCGG+TGG + chr5_1:56708282-56708301 Msa0738790:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 56706937 56708625 56706937 ID=Msa0738790;Name=Msa0738790
chr5_1 mRNA 56706937 56708625 56706937 ID=Msa0738790-mRNA-1;Parent=Msa0738790;Name=Msa0738790-mRNA-1;_AED=0.00;_eAED=0.00;_QI=128|1|1|1|1|1|2|170|93
chr5_1 exon 56706937 56707134 56706937 ID=Msa0738790-mRNA-1:exon:16084;Parent=Msa0738790-mRNA-1
chr5_1 exon 56708244 56708625 56708244 ID=Msa0738790-mRNA-1:exon:16085;Parent=Msa0738790-mRNA-1
chr5_1 five_prime_UTR 56706937 56707064 56706937 ID=Msa0738790-mRNA-1:five_prime_utr;Parent=Msa0738790-mRNA-1
chr5_1 CDS 56707065 56707134 56707065 ID=Msa0738790-mRNA-1:cds;Parent=Msa0738790-mRNA-1
chr5_1 CDS 56708244 56708455 56708244 ID=Msa0738790-mRNA-1:cds;Parent=Msa0738790-mRNA-1
chr5_1 three_prime_UTR 56708456 56708625 56708456 ID=Msa0738790-mRNA-1:three_prime_utr;Parent=Msa0738790-mRNA-1
Gene Sequence

>Msa0738790

ATGGTTCTTCTTATTTCGCAAGGAGTGTCAGCTAGGGACTTAACTGAAACTTCCTCTAATACCAAAAAGGAAATTGTTGAACAAAAAAATAAAGCAAGCTATCCAGCTTGCAGCCGAGGTTTGCGCGGTGGTAGTACTTGTCTTACAGCTCCTCCTAGTAATTGTCGCTATGGTTGTTGCGGTAATACTAATAGGGTTAATAGATCATTGAACTGTGATAAATGCTGCTCATATGCTGGTGAAGCTGTTGCTGTGCAAACTGAGCATAACACTCATAATTGA
Protein sequence

>Msa0738790

MVLLISQGVSARDLTETSSNTKKEIVEQKNKASYPACSRGLRGGSTCLTAPPSNCRYGCCGNTNRVNRSLNCDKCCSYAGEAVAVQTEHNTHN*