AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0739070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0739070 MtrunA17_Chr5g0438681 79.384 422 46 6 1 381 1 422 0.0 656
Msa0739070 MtrunA17_Chr5g0438681 66.535 254 62 4 582 816 8 257 3.75e-98 312
Msa0739070 MtrunA17_Chr5g0438701 76.706 425 53 6 1 381 1 423 0.0 645
Msa0739070 MtrunA17_Chr5g0438701 69.685 254 58 3 582 816 8 261 1.30e-106 334
Msa0739070 MtrunA17_Chr8g0376901 69.231 429 84 7 1 381 1 429 0.0 572
Msa0739070 MtrunA17_Chr8g0376901 59.766 256 81 5 582 815 8 263 1.90e-88 286
Msa0739070 MtrunA17_Chr8g0376891 64.706 442 103 9 1 389 1 442 0.0 547
Msa0739070 MtrunA17_Chr8g0376891 59.922 257 81 6 582 816 8 264 9.91e-90 290
Msa0739070 MtrunA17_Chr8g0376911 52.315 432 151 8 1 381 1 428 1.51e-136 412
Msa0739070 MtrunA17_Chr8g0376911 54.301 186 81 2 629 810 74 259 9.69e-56 198
Msa0739070 MtrunA17_Chr3g0123061 34.977 426 223 14 1 384 3 416 2.59e-69 234
Msa0739070 MtrunA17_Chr3g0123061 31.429 245 132 9 585 809 13 241 1.52e-22 101
Msa0739070 MtrunA17_Chr5g0438721 80.508 118 16 2 56 166 6 123 8.82e-58 193
Msa0739070 MtrunA17_Chr5g0438721 87.000 100 13 0 629 728 24 123 1.69e-55 187
Msa0739070 MtrunA17_Chr2g0278481 31.591 440 236 12 1 381 15 448 9.81e-53 190
Msa0739070 MtrunA17_Chr2g0278481 28.125 192 112 6 629 810 89 264 1.45e-16 83.2
Msa0739070 MtrunA17_Chr8g0361771 28.668 443 245 15 1 381 1 434 6.50e-44 165
Msa0739070 MtrunA17_Chr8g0361781 28.702 439 250 17 1 381 1 434 6.36e-41 156
Msa0739070 MtrunA17_Chr1g0176351 65.487 113 35 1 367 475 6 118 4.04e-39 144
Msa0739070 MtrunA17_Chr1g0199561 28.571 448 244 16 1 381 1 439 8.99e-39 150
Msa0739070 MtrunA17_Chr5g0438711 72.857 70 15 1 323 388 1 70 9.14e-30 112
Msa0739070 MtrunA17_Chr7g0270681 70.370 81 20 1 41 117 5 85 2.35e-29 112
Msa0739070 MtrunA17_Chr7g0270681 68.750 48 15 0 629 676 38 85 9.55e-16 73.2
Msa0739070 MtrunA17_Chr8g0389491 45.985 137 61 2 367 494 68 200 2.37e-28 113
Msa0739070 MtrunA17_Chr5g0433641 23.333 420 242 16 9 362 16 421 6.68e-20 93.6
Msa0739070 MtrunA17_Chr4g0024031 66.197 71 17 3 385 448 24 94 1.44e-18 90.5
Msa0739070 MtrunA17_Chr2g0328241 65.714 70 17 3 385 447 24 93 2.63e-18 89.7
Msa0739070 MtrunA17_Chr2g0328251 48.544 103 40 4 375 468 14 112 8.10e-18 88.2
Msa0739070 MtrunA17_Chr1g0165681 23.223 422 253 19 2 362 8 419 9.35e-18 87.0
Msa0739070 MtrunA17_Chr4g0072041 23.799 458 252 17 2 376 13 456 1.32e-16 83.6
Msa0739070 MtrunA17_Chr8g0371821 22.278 395 243 15 37 373 35 423 1.66e-16 82.8
Msa0739070 MtrunA17_Chr1g0165671 22.326 430 262 18 9 376 33 452 1.98e-16 83.2
Msa0739070 MtrunA17_Chr8g0386141 22.715 383 233 15 53 378 52 428 7.16e-16 81.3
Msa0739070 MtrunA17_Chr5g0408911 22.897 428 240 14 2 357 17 426 2.82e-15 79.3
Msa0739070 MtrunA17_Chr4g0054081 23.230 452 245 19 11 376 17 452 1.19e-14 77.4
Msa0739070 MtrunA17_Chr7g0273791 30.233 172 95 7 9 162 16 180 3.26e-14 76.3
Msa0739070 MtrunA17_Chr4g0053091 22.821 390 215 16 17 345 32 396 1.29e-12 70.9
Msa0739070 MtrunA17_Chr7g0252731 22.963 405 232 15 26 371 38 421 1.61e-12 70.5
Msa0739070 MtrunA17_Chr7g0219201 31.915 141 66 4 249 363 51 187 2.51e-12 67.0
Msa0739070 MtrunA17_Chr1g0165661 21.558 385 233 14 9 335 15 388 2.76e-12 69.7
Msa0739070 MtrunA17_Chr7g0219291 23.831 449 250 19 16 376 367 811 6.53e-12 69.3
Msa0739070 MtrunA17_Chr4g0053081 22.802 364 208 16 47 345 52 407 6.73e-12 68.6
Msa0739070 MtrunA17_Chr7g0273731 21.281 437 260 17 9 376 99 520 1.27e-11 68.2
Msa0739070 MtrunA17_Chr4g0053111 21.138 369 218 13 41 342 44 406 2.62e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0739070 AT3G26040.1 31.871 433 237 11 1 381 1 427 2.44e-65 225
Msa0739070 AT3G26040.1 31.414 191 113 7 629 812 74 253 2.47e-18 89.0
Msa0739070 AT1G24430.1 30.282 426 247 8 1 381 3 423 1.46e-58 206
Msa0739070 AT1G24430.1 28.902 173 112 3 637 809 86 247 1.92e-14 77.0
Msa0739070 AT1G24420.2 33.488 430 226 15 3 380 5 426 4.09e-52 188
Msa0739070 AT1G24420.2 33.146 178 104 6 638 810 88 255 7.42e-20 93.6
Msa0739070 AT1G24420.1 33.488 430 226 15 3 380 5 426 4.09e-52 188
Msa0739070 AT1G24420.1 33.146 178 104 6 638 810 88 255 7.42e-20 93.6
Msa0739070 AT5G47950.1 30.641 421 245 12 1 381 4 417 4.36e-48 177
Msa0739070 AT5G47950.1 31.868 182 104 9 634 810 81 247 2.26e-14 76.6
Msa0739070 AT4G15390.1 29.977 437 245 14 1 381 6 437 1.68e-47 176
Msa0739070 AT4G15390.1 32.432 185 105 9 636 810 85 259 3.99e-17 85.5
Msa0739070 AT4G15390.2 29.977 437 245 14 1 381 6 437 1.68e-47 176
Msa0739070 AT4G15390.2 32.432 185 105 9 636 810 85 259 3.99e-17 85.5
Msa0739070 AT5G23970.1 29.224 438 234 16 1 381 1 419 4.37e-46 171
Msa0739070 AT5G23970.1 26.316 190 116 6 629 810 69 242 5.78e-11 65.9
Msa0739070 AT3G30280.1 29.128 436 249 13 1 381 4 434 8.01e-46 171
Msa0739070 AT3G30280.1 30.769 182 111 7 636 810 83 256 6.11e-17 84.7
Msa0739070 AT5G47980.1 30.296 439 241 17 1 381 3 434 2.58e-40 155
Msa0739070 AT5G47980.1 30.601 183 114 6 633 810 79 253 3.98e-14 75.9
Msa0739070 AT4G15400.1 26.498 434 254 19 2 381 4 426 8.08e-28 117
Msa0739070 AT5G17540.1 24.130 431 257 22 9 377 15 437 2.41e-20 95.5
Msa0739070 AT3G48720.1 24.413 426 256 17 9 378 15 430 9.15e-19 90.5
Msa0739070 AT2G19070.1 23.111 450 250 19 10 376 11 447 1.12e-17 87.0
Msa0739070 AT5G41040.1 24.474 380 222 16 11 334 41 411 6.37e-17 84.7
Msa0739070 AT5G41040.2 24.474 380 222 16 11 334 25 395 7.48e-17 84.3
Msa0739070 AT5G63560.1 24.105 419 248 16 11 373 17 421 2.45e-16 82.8
Msa0739070 AT1G31490.1 22.475 396 238 15 11 349 14 397 5.60e-13 72.4
Msa0739070 AT3G50280.1 26.420 352 176 20 56 336 56 395 4.30e-12 69.7
Msa0739070 AT4G31910.1 23.696 460 252 20 3 376 9 455 3.55e-11 67.0
Msa0739070 AT3G50280.2 26.531 245 131 12 137 336 25 265 5.69e-11 65.1

Find 138 sgRNAs with CRISPR-Local

Find 477 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTCTTTAACACCATTTC+TGG 0.146770 5_1:+57121988 None:intergenic
CCAATGTATGAAGCAGATTT+TGG 0.187042 5_1:-57121408 Msa0739070:CDS
TTTCATCTTCCTCAAACTTT+TGG 0.201806 5_1:+57122088 None:intergenic
CAGATTCTTGGGAATCTCTT+TGG 0.224505 5_1:+57119562 None:intergenic
CCTAAAATGTTTAGAGAGAT+AGG 0.226215 5_1:-57121628 Msa0739070:CDS
AAAACAATGTCGTATTTAAA+AGG 0.232108 5_1:-57115210 Msa0739070:CDS
ATCATTCATGAAGTTGAAAA+TGG 0.240127 5_1:+57115369 None:intergenic
ATCATTCATGAAGTTGAAAA+TGG 0.240127 5_1:+57122125 None:intergenic
ATAACCCAGCTTGGTCTAAA+AGG 0.241864 5_1:-57119535 Msa0739070:CDS
TTATAGCCATTCAAATAAAT+TGG 0.252969 5_1:-57122209 Msa0739070:intron
TCTCTCTTTCCCGCAATCTC+TGG 0.255027 5_1:+57115232 None:intergenic
GAAACAAGATTTATCTTTCT+TGG 0.264063 5_1:+57120198 None:intergenic
CCGCGAGTTACCTGCCATTC+TGG 0.267687 5_1:+57120462 None:intergenic
TTAAGAGACTTTATCATTGC+AGG 0.300319 5_1:+57115175 None:intergenic
CCCGCAATCTCTGGGAAAAT+AGG 0.303007 5_1:+57115241 None:intergenic
TTCAGAGACTTGATCATTGC+AGG 0.308231 5_1:+57121931 None:intergenic
TTTCATCTTCCTCTAGCATT+TGG 0.313258 5_1:+57115332 None:intergenic
TGTTCATCAAGGAATTATAT+TGG 0.317773 5_1:-57121351 Msa0739070:CDS
TTGTTTCCCTCATTCTGATT+TGG 0.319040 5_1:-57120182 Msa0739070:intron
TGAAATGGAACTCGAGGATT+TGG 0.319356 5_1:-57121695 Msa0739070:CDS
TTTGGTCTATACTCTTGTTT+GGG 0.336307 5_1:+57122469 None:intergenic
TTGGATGGGGAAAACCAATA+TGG 0.339260 5_1:-57121389 Msa0739070:CDS
CTCTAGCATTTGGTTGATGA+TGG 0.339587 5_1:+57115342 None:intergenic
ATTTGCACGAGTCACAAAAT+TGG 0.340036 5_1:-57115403 Msa0739070:CDS
TCTTTCCATTGTAATTCATC+AGG 0.347159 5_1:+57122252 None:intergenic
TGAGAAGGAGTTGGTGATGA+AGG 0.349993 5_1:+57122567 None:intergenic
AAGGAATTATATTGGTCTAA+TGG 0.352256 5_1:-57121343 Msa0739070:CDS
TGCAAAGCAGTTTATTTGAA+TGG 0.361392 5_1:+57115447 None:intergenic
TGCAAACCAATTTATTTGAA+TGG 0.366880 5_1:+57122203 None:intergenic
AACACCATTTCTGGGAAGAT+AGG 0.377854 5_1:+57121997 None:intergenic
TCCTGCATCAAGTAAACTTA+AGG 0.380011 5_1:+57115291 None:intergenic
TGGGTTATGAAACAGATTCT+TGG 0.384538 5_1:+57119550 None:intergenic
CGAATATGATGGGGTTTCAT+TGG 0.389996 5_1:+57119728 None:intergenic
TCTTTCCATTGTAATTCATC+AGG 0.391887 5_1:+57115496 None:intergenic
TTTAGATAAAAGTTGAGATA+AGG 0.392208 5_1:+57122419 None:intergenic
CACGTACAATCACAATCTTC+AGG 0.393009 5_1:-57119680 Msa0739070:intron
CTCTCTTTCCCGCAATCTCT+GGG 0.393969 5_1:+57115233 None:intergenic
TCTGATGGGTAGCGGCGAAA+TGG 0.398927 5_1:-57119864 Msa0739070:intron
TGCAATGATAAAGTCTCTTA+AGG 0.400039 5_1:-57115173 Msa0739070:CDS
GGTCACATGTTTCATTGCTT+CGG 0.403516 5_1:+57119799 None:intergenic
AATGTGTAGGGAACATGGTT+TGG 0.407249 5_1:-57121744 Msa0739070:CDS
ACCTTGATCATTACATTCAA+TGG 0.407499 5_1:+57122359 None:intergenic
ACCTTGATCATTACATTCAA+TGG 0.407509 5_1:+57115603 None:intergenic
TGAATTACAATGGAAAGAAA+TGG 0.409552 5_1:-57122247 Msa0739070:CDS
CCGGTAGTGGTGATCCATAT+TGG 0.412542 5_1:+57121375 None:intergenic
TTTCAACTTCATGAATGATT+GGG 0.414945 5_1:-57115365 Msa0739070:CDS
TTTCAACTTCATGAATGATT+GGG 0.414945 5_1:-57122121 Msa0739070:CDS
GATGACAAATAAGAATGAAA+TGG 0.416300 5_1:-57121710 Msa0739070:CDS
GGGTTATGAAACAGATTCTT+GGG 0.423346 5_1:+57119551 None:intergenic
ATTAGAAACTTTCATATGTC+AGG 0.424609 5_1:-57120235 Msa0739070:CDS
CTGATGGGTAGCGGCGAAAT+GGG 0.426498 5_1:-57119863 Msa0739070:intron
ATTGCTTCGGCGCTGATTGA+AGG 0.438158 5_1:+57119812 None:intergenic
CGGACAACGATATATCGAAT+TGG 0.438461 5_1:+57120534 None:intergenic
CTCTCTTTAACACCATTTCT+GGG 0.439266 5_1:+57121989 None:intergenic
TTTGCCTATCTTCCCAGAAA+TGG 0.440943 5_1:-57122001 Msa0739070:CDS
TACAATGGAAAGAAATGGAT+TGG 0.442482 5_1:-57122242 Msa0739070:CDS
GAACATGGAAGAGAAATATA+TGG 0.443857 5_1:-57121286 Msa0739070:CDS
CCAAAATCTGCTTCATACAT+TGG 0.446068 5_1:+57121408 None:intergenic
TACAATGGAAAGACATGGAT+TGG 0.454586 5_1:-57115486 Msa0739070:CDS
TCTCTTTGGATGTGTACAAC+TGG 0.456297 5_1:+57119576 None:intergenic
TTGGTCTACAAAATAAAAGA+AGG 0.457762 5_1:-57121676 Msa0739070:CDS
AGAAATGATGCATCTGTAGT+TGG 0.462608 5_1:-57120328 Msa0739070:CDS
CCTGCATCAAGTAAACTTAA+GGG 0.469842 5_1:+57115292 None:intergenic
CCCTTAAGTTTACTTGATGC+AGG 0.471203 5_1:-57115292 Msa0739070:CDS
GGATAAAGTTTGAGATGAGA+AGG 0.476232 5_1:+57122552 None:intergenic
TAATCTTTGTTGTAACAAAA+CGG 0.481557 5_1:+57120514 None:intergenic
GTAATTCATCAGGGAACAAA+GGG 0.482195 5_1:+57122262 None:intergenic
ATAATTCCTTGATGAACAAC+CGG 0.484249 5_1:+57121356 None:intergenic
ATCTGTTTCATAACCCAGCT+TGG 0.486517 5_1:-57119544 Msa0739070:CDS
ACCATTGAATGTAATGATCA+AGG 0.486582 5_1:-57115604 Msa0739070:CDS
TTCTGGAAACACGTCTCAAA+AGG 0.488539 5_1:+57120479 None:intergenic
AGACGTGTTTCCAGAATGGC+AGG 0.495534 5_1:-57120472 Msa0739070:CDS
ATGCTGTCTATGAAAGAAAG+TGG 0.497544 5_1:+57122531 None:intergenic
CATTATAAACCAAAAGTTTG+AGG 0.504187 5_1:-57122097 Msa0739070:CDS
ACCATTGAATGTAATGATCA+AGG 0.505189 5_1:-57122360 Msa0739070:CDS
TAGTAATAATCGTCGATGCT+TGG 0.511766 5_1:+57119764 None:intergenic
GTAATTCATCAGGAAACAAA+GGG 0.514981 5_1:+57115506 None:intergenic
CTAAAATGTTTAGAGAGATA+GGG 0.518922 5_1:-57121627 Msa0739070:CDS
TTTGAGACGTGTTTCCAGAA+TGG 0.520338 5_1:-57120476 Msa0739070:CDS
CCTTGATGAACAACCGGTAG+TGG 0.520561 5_1:+57121362 None:intergenic
TGTAATTCATCAGGAAACAA+AGG 0.521641 5_1:+57115505 None:intergenic
AAGATATTACAACAAGTTGA+AGG 0.522934 5_1:-57120581 Msa0739070:CDS
AAAATAGGCAAATCCCTTTG+TGG 0.526064 5_1:+57115256 None:intergenic
GAATATGATGGGGTTTCATT+GGG 0.527078 5_1:+57119729 None:intergenic
AAGATAGGCAAATCCCTTTG+TGG 0.529715 5_1:+57122012 None:intergenic
GGTCTAATGGATACAAAAGA+TGG 0.532929 5_1:-57121330 Msa0739070:CDS
CATTGAAGCTCTTGTGAACA+TGG 0.533971 5_1:-57121301 Msa0739070:CDS
CCACTACCGGTTGTTCATCA+AGG 0.534524 5_1:-57121362 Msa0739070:CDS
GGCAGGTAACTCGCGGAAGA+CGG 0.534870 5_1:-57120455 Msa0739070:CDS
ATTTGCATTAGTCACAAACT+TGG 0.535036 5_1:-57122159 Msa0739070:CDS
CTTTCCATTGTAATTCATCA+GGG 0.539048 5_1:+57122253 None:intergenic
TTGGTTTGCATGTGGAGGAA+TGG 0.541400 5_1:-57122190 Msa0739070:CDS
TGTAATTCATCAGGGAACAA+AGG 0.542689 5_1:+57122261 None:intergenic
GATAAAGTCTCTTAAGGCAA+TGG 0.543044 5_1:-57115167 Msa0739070:CDS
GTGTGCCATGCGAATATGAT+GGG 0.543623 5_1:+57119718 None:intergenic
CAAATAAATTGGTTTGCATG+TGG 0.543623 5_1:-57122198 Msa0739070:CDS
ACTGCATGGATTTACAAGAA+TGG 0.548011 5_1:-57115100 Msa0739070:CDS
GCGTACAAGTTGTAACTGCT+TGG 0.550269 5_1:-57121870 Msa0739070:CDS
ATGCTCACCAAATCAGAATG+AGG 0.550520 5_1:+57120175 None:intergenic
CCAATATGGATCACCACTAC+CGG 0.561552 5_1:-57121375 Msa0739070:CDS
CAAATAAACTGCTTTGCATG+TGG 0.564342 5_1:-57115442 Msa0739070:CDS
TGTGTGCCATGCGAATATGA+TGG 0.566203 5_1:+57119717 None:intergenic
CTGCTTTGCATGTGGAGGAA+TGG 0.571840 5_1:-57115434 Msa0739070:CDS
AGTTTGAGATGAGAAGGAGT+TGG 0.578337 5_1:+57122558 None:intergenic
TAAGAATGAAATGGAACTCG+AGG 0.578488 5_1:-57121701 Msa0739070:CDS
ATAAATTGGTTTGCATGTGG+AGG 0.582138 5_1:-57122195 Msa0739070:CDS
ATAAACTGCTTTGCATGTGG+AGG 0.589850 5_1:-57115439 Msa0739070:CDS
TACGCGTGTAGGAGAATGCA+TGG 0.589876 5_1:+57121888 None:intergenic
GATCAAGTCTCTGAAGGCAA+TGG 0.590330 5_1:-57121923 Msa0739070:CDS
TGCAATGATCAAGTCTCTGA+AGG 0.594661 5_1:-57121929 Msa0739070:CDS
TGGTCTACAAAATAAAAGAA+GGG 0.595399 5_1:-57121675 Msa0739070:CDS
ATGGATACAAAAGATGGAGA+TGG 0.595788 5_1:-57121324 Msa0739070:CDS
ATGTACAAGTTGTAACTGCA+TGG 0.597595 5_1:-57115114 Msa0739070:CDS
GACGATTATTACTACGGTCA+AGG 0.598335 5_1:-57119755 Msa0739070:CDS
TGCTCACCAAATCAGAATGA+GGG 0.605495 5_1:+57120176 None:intergenic
GGAGAAGAAGAAAGTGGTGG+CGG 0.606429 5_1:-57119842 Msa0739070:CDS
TGTTCCCTGATGAATTACAA+TGG 0.607542 5_1:-57122257 Msa0739070:CDS
TGTTTCCTGATGAATTACAA+TGG 0.609516 5_1:-57115501 Msa0739070:CDS
AGCATCGACGATTATTACTA+CGG 0.613077 5_1:-57119761 Msa0739070:CDS
GGGTTGTAAAAGTAAAGCAA+TGG 0.614884 5_1:+57122489 None:intergenic
AACTGGTAATGATTTGACGA+TGG 0.620108 5_1:+57119593 None:intergenic
GATGCTTGGTTCGTAGAAGT+AGG 0.625108 5_1:+57119778 None:intergenic
GGAAACACGTCTCAAAAGGT+CGG 0.635926 5_1:+57120483 None:intergenic
TGAATTACAATGGAAAGACA+TGG 0.640890 5_1:-57115491 Msa0739070:CDS
GAAACCCCATCATATTCGCA+TGG 0.643447 5_1:-57119723 Msa0739070:CDS
CGAGGAGACTGATGAGAACG+TGG 0.648525 5_1:-57120290 Msa0739070:CDS
CATCATCAACCAAATGCTAG+AGG 0.648988 5_1:-57115341 Msa0739070:CDS
CCAGAATGGCAGGTAACTCG+CGG 0.649008 5_1:-57120462 Msa0739070:CDS
GTTACAACTTGTACGCGTGT+AGG 0.649788 5_1:+57121877 None:intergenic
TGGAACTAATCAAATTATCG+AGG 0.656819 5_1:-57120308 Msa0739070:CDS
AGTTACAACTTGTACATGTG+TGG 0.675223 5_1:+57115120 None:intergenic
GTTAAAGAGAGAAAACAATG+TGG 0.678799 5_1:-57121977 Msa0739070:CDS
CTGAAGATTGTGATTGTACG+TGG 0.691429 5_1:+57119681 None:intergenic
GTTACAACTTGTACATGTGT+GGG 0.702962 5_1:+57115121 None:intergenic
ATGGGAGAAGAAGAAAGTGG+TGG 0.708558 5_1:-57119845 Msa0739070:CDS
GAAATGGGAGAAGAAGAAAG+TGG 0.711748 5_1:-57119848 Msa0739070:CDS
AAGATTGTGATTGTACGTGG+TGG 0.712463 5_1:+57119684 None:intergenic
TGTGCCATGCGAATATGATG+GGG 0.730067 5_1:+57119719 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATCAAAATAAAATATTTT+AGG - chr5_1:57120289-57120308 Msa0739070:CDS 10.0%
!! ATAAATAAGATTAAAATCTA+AGG - chr5_1:57120654-57120673 Msa0739070:intron 10.0%
!! TAAATAAGATTAAAATCTAA+GGG - chr5_1:57120655-57120674 Msa0739070:intron 10.0%
!! GAATTTATTAGATTTATTTA+TGG + chr5_1:57120745-57120764 None:intergenic 10.0%
!! TTTCATAATATAAATATAGA+TGG + chr5_1:57120848-57120867 None:intergenic 10.0%
!! NNNNNNNNNACAAATGTGTT+TGG - chr5_1:57116234-57116253 Msa0739070:intron 15.0%
!!! GTTATTTTCTATAGTATTTT+AGG - chr5_1:57116590-57116609 Msa0739070:intron 15.0%
!! AATTTCCAATTCATAATATT+CGG + chr5_1:57117582-57117601 None:intergenic 15.0%
!! TCATGGAAAATATAAAAATA+CGG + chr5_1:57118638-57118657 None:intergenic 15.0%
!!! TTTTTTTTCTTCTTTCTTTT+GGG + chr5_1:57118834-57118853 None:intergenic 15.0%
!!! ATTTTTTTTCTTCTTTCTTT+TGG + chr5_1:57118835-57118854 None:intergenic 15.0%
!!! TTATTTTCTACAGTATTTTA+GGG - chr5_1:57120047-57120066 Msa0739070:intron 15.0%
!! ATAAAAAAACAAATACCAAT+AGG + chr5_1:57121281-57121300 None:intergenic 15.0%
!!! GTATTTGTTTTTTTATAGTA+TGG - chr5_1:57121285-57121304 Msa0739070:CDS 15.0%
!!! GTTGTGATATTTTTGAATTT+TGG + chr5_1:57115239-57115258 None:intergenic 20.0%
!! TTTAGATAAAAGTTGAGATA+AGG + chr5_1:57115271-57115290 None:intergenic 20.0%
!! TTATAGCCATTCAAATAAAT+TGG - chr5_1:57115478-57115497 Msa0739070:CDS 20.0%
!! AAAATACTATAGAAATACTG+TGG + chr5_1:57116526-57116545 None:intergenic 20.0%
!! TACATATGTTAAGCTTAAAT+AGG + chr5_1:57116628-57116647 None:intergenic 20.0%
!!! TAATCTTTGTTGTAACAAAA+CGG + chr5_1:57117176-57117195 None:intergenic 20.0%
!!! TTCTGATAATGTATATTCAA+AGG - chr5_1:57117279-57117298 Msa0739070:intron 20.0%
!! TATTATGAATTGGAAATTGA+AGG - chr5_1:57117584-57117603 Msa0739070:intron 20.0%
!!! GAAATTTTAGGGAATTTTTT+AGG + chr5_1:57118042-57118061 None:intergenic 20.0%
!! TATAAAATCATGTTGAACAT+AGG + chr5_1:57118226-57118245 None:intergenic 20.0%
!! AATGTATATTGAATTTGGAA+TGG + chr5_1:57118250-57118269 None:intergenic 20.0%
!!! TCCAAATTCAATATACATTT+TGG - chr5_1:57118251-57118270 Msa0739070:intron 20.0%
!! ACCAAAATGTATATTGAATT+TGG + chr5_1:57118255-57118274 None:intergenic 20.0%
!! TATCCATTTGATTAATATCA+TGG - chr5_1:57118342-57118361 Msa0739070:intron 20.0%
!!! TTTTTTTCTTCTTTCTTTTG+GGG + chr5_1:57118833-57118852 None:intergenic 20.0%
!! TAGCCAAGTAATATATTAAT+GGG + chr5_1:57118890-57118909 None:intergenic 20.0%
!! ATATTTAATCGTACTTACAA+TGG + chr5_1:57119516-57119535 None:intergenic 20.0%
!! ATTGTAAGTACGATTAAATA+TGG - chr5_1:57119515-57119534 Msa0739070:CDS 20.0%
!! ACAAAATTTCAACATAATAC+AGG - chr5_1:57119620-57119639 Msa0739070:intron 20.0%
!! AAACAAAGTTCATTTGAAAA+AGG + chr5_1:57119685-57119704 None:intergenic 20.0%
!! TCCAATTTATTACTTGTTTA+TGG - chr5_1:57119734-57119753 Msa0739070:CDS 20.0%
!! TCCATAAACAAGTAATAAAT+TGG + chr5_1:57119738-57119757 None:intergenic 20.0%
!! AAAATACTATAGAAATACAG+TGG + chr5_1:57119982-57120001 None:intergenic 20.0%
!!! TTTTCTCTTTTTGTTTCAAT+TGG - chr5_1:57120024-57120043 Msa0739070:intron 20.0%
!!! GTTATTTTCTACAGTATTTT+AGG - chr5_1:57120046-57120065 Msa0739070:intron 20.0%
!!! ATTTTGATTCATATAGTACA+AGG + chr5_1:57120279-57120298 None:intergenic 20.0%
!!! TTATTGGCTAACATTAATTT+CGG + chr5_1:57120564-57120583 None:intergenic 20.0%
!! TAACATTGCTCTTATATTAT+TGG - chr5_1:57121053-57121072 Msa0739070:intron 20.0%
!!! GAAAAATATCATTTTCCTAT+TGG - chr5_1:57121263-57121282 Msa0739070:CDS 20.0%
!! TTCTTAAAATAATAACACGT+TGG - chr5_1:57121351-57121370 Msa0739070:CDS 20.0%
!!! GTCTTTTTCTTATAAAGTAA+GGG + chr5_1:57121602-57121621 None:intergenic 20.0%
!!! TGTCTTTTTCTTATAAAGTA+AGG + chr5_1:57121603-57121622 None:intergenic 20.0%
!! GAAAGAAATTAAAGTTGTAT+TGG - chr5_1:57121690-57121709 Msa0739070:CDS 20.0%
!! TATTCAAATATTTCATCAGT+TGG - chr5_1:57121818-57121837 Msa0739070:intron 20.0%
!! TTTAGATAAAAGTTGAGATA+AGG + chr5_1:57115271-57115290 None:intergenic 20.0%
!! AAAACAATGTCGTATTTAAA+AGG - chr5_1:57122477-57122496 Msa0739070:CDS 20.0%
!! TCTAAATACTATCATTTTGC+TGG - chr5_1:57115285-57115304 Msa0739070:CDS 25.0%
! TGAATTACAATGGAAAGAAA+TGG - chr5_1:57115440-57115459 Msa0739070:CDS 25.0%
! TGCAAACCAATTTATTTGAA+TGG + chr5_1:57115487-57115506 None:intergenic 25.0%
! ATCATTCATGAAGTTGAAAA+TGG + chr5_1:57115565-57115584 None:intergenic 25.0%
!! TTTTCAACTTCATGAATGAT+TGG - chr5_1:57115565-57115584 Msa0739070:CDS 25.0%
! TTTCAACTTCATGAATGATT+GGG - chr5_1:57115566-57115585 Msa0739070:CDS 25.0%
!!! CTCAAACTTTTGGTTTATAA+TGG + chr5_1:57115592-57115611 None:intergenic 25.0%
! CATTATAAACCAAAAGTTTG+AGG - chr5_1:57115590-57115609 Msa0739070:CDS 25.0%
! ATTTAACCCCATAATTGAAA+CGG + chr5_1:57115856-57115875 None:intergenic 25.0%
! GATGACAAATAAGAATGAAA+TGG - chr5_1:57115977-57115996 Msa0739070:intron 25.0%
! TTGGTCTACAAAATAAAAGA+AGG - chr5_1:57116011-57116030 Msa0739070:intron 25.0%
! TGGTCTACAAAATAAAAGAA+GGG - chr5_1:57116012-57116031 Msa0739070:intron 25.0%
! CTAAAATGTTTAGAGAGATA+GGG - chr5_1:57116060-57116079 Msa0739070:intron 25.0%
! TGTTCATCAAGGAATTATAT+TGG - chr5_1:57116336-57116355 Msa0739070:intron 25.0%
!! AAGGAATTATATTGGTCTAA+TGG - chr5_1:57116344-57116363 Msa0739070:intron 25.0%
! TTTAAGCTTAACATATGTAG+AGG - chr5_1:57116629-57116648 Msa0739070:intron 25.0%
!! AAGATATTACAACAAGTTGA+AGG - chr5_1:57117106-57117125 Msa0739070:intron 25.0%
! ATTAGAAACTTTCATATGTC+AGG - chr5_1:57117452-57117471 Msa0739070:intron 25.0%
! GAAACAAGATTTATCTTTCT+TGG + chr5_1:57117492-57117511 None:intergenic 25.0%
! AACTTCCGAATATTATGAAT+TGG - chr5_1:57117574-57117593 Msa0739070:intron 25.0%
!!! TTTTGAAACTCAACAGTTTT+GGG + chr5_1:57117629-57117648 None:intergenic 25.0%
!!! ATTTTGAAACTCAACAGTTT+TGG + chr5_1:57117630-57117649 None:intergenic 25.0%
!! GCTCTTGAAAAGAAATTTTA+GGG + chr5_1:57118053-57118072 None:intergenic 25.0%
!! TGCTCTTGAAAAGAAATTTT+AGG + chr5_1:57118054-57118073 None:intergenic 25.0%
!!! TACATTTTGGTTCATGAAAA+TGG - chr5_1:57118264-57118283 Msa0739070:intron 25.0%
! AGTCCATGATATTAATCAAA+TGG + chr5_1:57118348-57118367 None:intergenic 25.0%
! AATAACAATATGATTCATGG+CGG + chr5_1:57118386-57118405 None:intergenic 25.0%
! CTCAATAACAATATGATTCA+TGG + chr5_1:57118389-57118408 None:intergenic 25.0%
! TGTTATTGAGATTTCTTGAA+TGG - chr5_1:57118399-57118418 Msa0739070:intron 25.0%
! GTTATTGAGATTTCTTGAAT+GGG - chr5_1:57118400-57118419 Msa0739070:intron 25.0%
! AAAACATATTTCTTTGTTCC+AGG - chr5_1:57118597-57118616 Msa0739070:intron 25.0%
! TACCCCATTAATATATTACT+TGG - chr5_1:57118884-57118903 Msa0739070:intron 25.0%
! AGCCAAGTAATATATTAATG+GGG + chr5_1:57118889-57118908 None:intergenic 25.0%
! CTAGCCAAGTAATATATTAA+TGG + chr5_1:57118891-57118910 None:intergenic 25.0%
!! GCTAGTTCAAATAATTTTGT+TGG - chr5_1:57118906-57118925 Msa0739070:intron 25.0%
! AATTGCTCTGATAATATTCT+TGG + chr5_1:57119299-57119318 None:intergenic 25.0%
! CATATATAATGTAATCTGAC+AGG + chr5_1:57119364-57119383 None:intergenic 25.0%
! TCATCTAAAGAAATGGAATT+AGG - chr5_1:57119578-57119597 Msa0739070:CDS 25.0%
! CATCTAAAGAAATGGAATTA+GGG - chr5_1:57119579-57119598 Msa0739070:CDS 25.0%
! AGTAATAAATTGGATGATGA+AGG + chr5_1:57119728-57119747 None:intergenic 25.0%
! GTATTTAAACTAAACCATCT+TGG - chr5_1:57119818-57119837 Msa0739070:CDS 25.0%
! TTGAATAAAAGTTGTCTCTT+AGG + chr5_1:57120108-57120127 None:intergenic 25.0%
! TAGACAAACTTGTGAAAATA+GGG + chr5_1:57120179-57120198 None:intergenic 25.0%
! TTCATATAGTACAAGGATAA+TGG + chr5_1:57120272-57120291 None:intergenic 25.0%
!!! TTTGATTAACTTGTCACAAT+GGG + chr5_1:57120402-57120421 None:intergenic 25.0%
!!! TTTTGATTAACTTGTCACAA+TGG + chr5_1:57120403-57120422 None:intergenic 25.0%
!! TATTGGCTAACATTAATTTC+GGG + chr5_1:57120563-57120582 None:intergenic 25.0%
!!! AGAATTTTTCAAGAAACATG+TGG - chr5_1:57120897-57120916 Msa0739070:intron 25.0%
!! AAAAGTTGGAGTATTTATTG+AGG - chr5_1:57121655-57121674 Msa0739070:CDS 25.0%
!! AAAGTTGGAGTATTTATTGA+GGG - chr5_1:57121656-57121675 Msa0739070:CDS 25.0%
! GTATTTATTGAGGGTAAAAT+TGG - chr5_1:57121665-57121684 Msa0739070:CDS 25.0%
!!! GCTGTGATATTTTTGAATTT+TGG + chr5_1:57121994-57122013 None:intergenic 25.0%
!!! CTAAATACTATCATTTTTGC+TGG - chr5_1:57122041-57122060 Msa0739070:intron 25.0%
!!! AAGTTTGTTTTTTACCTTTG+TGG + chr5_1:57122123-57122142 None:intergenic 25.0%
!! TCAATTTTTCTGTGGTATTT+TGG + chr5_1:57122157-57122176 None:intergenic 25.0%
! ATCATTCATGAAGTTGAAAA+TGG + chr5_1:57115565-57115584 None:intergenic 25.0%
!! TTTTCAACTTCATGAATGAT+TGG - chr5_1:57115565-57115584 Msa0739070:CDS 25.0%
! TTTCAACTTCATGAATGATT+GGG - chr5_1:57115566-57115585 Msa0739070:CDS 25.0%
! TTTGGTCTATACTCTTGTTT+GGG + chr5_1:57115221-57115240 None:intergenic 30.0%
! TTTTGGTCTATACTCTTGTT+TGG + chr5_1:57115222-57115241 None:intergenic 30.0%
! AATACTATCATTTTGCTGGT+AGG - chr5_1:57115289-57115308 Msa0739070:CDS 30.0%
ACCATTGAATGTAATGATCA+AGG - chr5_1:57115327-57115346 Msa0739070:CDS 30.0%
ACCTTGATCATTACATTCAA+TGG + chr5_1:57115331-57115350 None:intergenic 30.0%
!!! TGATCAAGGTGTGTTATTTT+TGG - chr5_1:57115341-57115360 Msa0739070:CDS 30.0%
!!! TGTGTTATTTTTGGTCACAA+AGG - chr5_1:57115350-57115369 Msa0739070:CDS 30.0%
! ACAATTTTTCTGTGGGATTT+TGG + chr5_1:57115401-57115420 None:intergenic 30.0%
! GGGTTTAACAATTTTTCTGT+GGG + chr5_1:57115408-57115427 None:intergenic 30.0%
! AGGGTTTAACAATTTTTCTG+TGG + chr5_1:57115409-57115428 None:intergenic 30.0%
CTTTCCATTGTAATTCATCA+GGG + chr5_1:57115437-57115456 None:intergenic 30.0%
TCTTTCCATTGTAATTCATC+AGG + chr5_1:57115438-57115457 None:intergenic 30.0%
TACAATGGAAAGAAATGGAT+TGG - chr5_1:57115445-57115464 Msa0739070:CDS 30.0%
!! CAAATAAATTGGTTTGCATG+TGG - chr5_1:57115489-57115508 Msa0739070:CDS 30.0%
ATTTGCATTAGTCACAAACT+TGG - chr5_1:57115528-57115547 Msa0739070:CDS 30.0%
! TTTCATCTTCCTCAAACTTT+TGG + chr5_1:57115602-57115621 None:intergenic 30.0%
CCTACATCAAGTAAACTTAA+GGG + chr5_1:57115642-57115661 None:intergenic 30.0%
TCCTACATCAAGTAAACTTA+AGG + chr5_1:57115643-57115662 None:intergenic 30.0%
! AGCAACAATTTTTCCACAAA+GGG - chr5_1:57115662-57115681 Msa0739070:intron 30.0%
GTTAAAGAGAGAAAACAATG+TGG - chr5_1:57115710-57115729 Msa0739070:intron 30.0%
! TATGGGGTTAAATTTTCAGA+CGG - chr5_1:57115863-57115882 Msa0739070:intron 30.0%
! CCTATCTCTCTAAACATTTT+AGG + chr5_1:57116062-57116081 None:intergenic 30.0%
CCTAAAATGTTTAGAGAGAT+AGG - chr5_1:57116059-57116078 Msa0739070:intron 30.0%
! NNNNNNNNATTCTCGGGTTG+AGG + chr5_1:57116131-57116150 None:intergenic 30.0%
!!! ATGTGTTTGGTTTTAGTAGT+TGG - chr5_1:57116247-57116266 Msa0739070:intron 30.0%
ATAATTCCTTGATGAACAAC+CGG + chr5_1:57116334-57116353 None:intergenic 30.0%
GAACATGGAAGAGAAATATA+TGG - chr5_1:57116401-57116420 Msa0739070:intron 30.0%
TCATCATATCCAACATTGTT+TGG + chr5_1:57116474-57116493 None:intergenic 30.0%
! AGAGGCAACTTTTATTCAAT+CGG - chr5_1:57116647-57116666 Msa0739070:intron 30.0%
! AGAGAGTTTTTCTCAATTTC+TGG - chr5_1:57116679-57116698 Msa0739070:intron 30.0%
AACTTGTGAAAATAGGGTTT+CGG + chr5_1:57116711-57116730 None:intergenic 30.0%
!! AACTTGTTTCTTTTCAGTCT+AGG - chr5_1:57116742-57116761 Msa0739070:intron 30.0%
! AGGATCAATTCTGGTTATTA+GGG - chr5_1:57117004-57117023 Msa0739070:intron 30.0%
TAGCTCATAGTATTCCAAAT+CGG + chr5_1:57117087-57117106 None:intergenic 30.0%
TGGAACTAATCAAATTATCG+AGG - chr5_1:57117379-57117398 Msa0739070:intron 30.0%
TCGGAAGTTGTGAATAAAAT+AGG + chr5_1:57117563-57117582 None:intergenic 30.0%
!! TATTTGAATCTGTTGACTTC+AGG - chr5_1:57117725-57117744 Msa0739070:intron 30.0%
AACCTTCTTCTTCTCATATA+AGG - chr5_1:57117771-57117790 Msa0739070:intron 30.0%
ATGGAAGAAGAATTTCTGAT+GGG - chr5_1:57117809-57117828 Msa0739070:intron 30.0%
!!! TTTGACGATGGTTTTATACT+GGG + chr5_1:57118085-57118104 None:intergenic 30.0%
!!! ATTTGACGATGGTTTTATAC+TGG + chr5_1:57118086-57118105 None:intergenic 30.0%
TTCATGAAAATGGTCAAGTA+TGG - chr5_1:57118274-57118293 Msa0739070:intron 30.0%
AAGTAAGAAAAAGGGGTAAT+TGG + chr5_1:57118304-57118323 None:intergenic 30.0%
ACCATCAAAGTAAGAAAAAG+GGG + chr5_1:57118311-57118330 None:intergenic 30.0%
GACCATCAAAGTAAGAAAAA+GGG + chr5_1:57118312-57118331 None:intergenic 30.0%
TGACCATCAAAGTAAGAAAA+AGG + chr5_1:57118313-57118332 None:intergenic 30.0%
! ATATGTTTTGCATCTCCTAA+AGG + chr5_1:57118586-57118605 None:intergenic 30.0%
GTTTGTCTTCATATCAAAAG+CGG - chr5_1:57118711-57118730 Msa0739070:intron 30.0%
!! TTGTTTTATAGTGCCATTCA+GGG - chr5_1:57118752-57118771 Msa0739070:intron 30.0%
GTAAGTACGATTAAATATGG+AGG - chr5_1:57119518-57119537 Msa0739070:CDS 30.0%
CACTACTTCATCTAAAGAAA+TGG - chr5_1:57119571-57119590 Msa0739070:CDS 30.0%
TTTATCAAAATGAGAACTCG+AGG - chr5_1:57119914-57119933 Msa0739070:intron 30.0%
! GAGAGTTTTTCTCAATTTTC+TGG - chr5_1:57120142-57120161 Msa0739070:intron 30.0%
! AGTTTTTCTCAATTTTCTGG+TGG - chr5_1:57120145-57120164 Msa0739070:intron 30.0%
AACTTGTGAAAATAGGGTTT+CGG + chr5_1:57116711-57116730 None:intergenic 30.0%
GTAGACAAACTTGTGAAAAT+AGG + chr5_1:57120180-57120199 None:intergenic 30.0%
AGTAGGCTTTCATATCATTT+GGG + chr5_1:57120244-57120263 None:intergenic 30.0%
TAGTAGGCTTTCATATCATT+TGG + chr5_1:57120245-57120264 None:intergenic 30.0%
!! TTGATTAACTTGTCACAATG+GGG + chr5_1:57120401-57120420 None:intergenic 30.0%
TGAAGAATTCAAGAATGACA+TGG + chr5_1:57120692-57120711 None:intergenic 30.0%
GATAAATAGTGCATTGTGAT+TGG + chr5_1:57121140-57121159 None:intergenic 30.0%
AAATTGTGTGAGAGAAAAGT+TGG - chr5_1:57121641-57121660 Msa0739070:CDS 30.0%
!! AAGTGACACTCATTTTGAAA+TGG - chr5_1:57121756-57121775 Msa0739070:CDS 30.0%
AAATATTTCATCAGTTGGAG+AGG - chr5_1:57121823-57121842 Msa0739070:intron 30.0%
! GGATAATATTTGAGATGAGA+AGG + chr5_1:57121893-57121912 None:intergenic 30.0%
ATGTTGTCTATGAAAGAAAG+TGG + chr5_1:57121914-57121933 None:intergenic 30.0%
! TTTGGTCTATACTCTTGTTT+GGG + chr5_1:57115221-57115240 None:intergenic 30.0%
! TTTTGGTCTATACTCTTGTT+TGG + chr5_1:57115222-57115241 None:intergenic 30.0%
!! ATACTATCATTTTTGCTGGT+AGG - chr5_1:57122045-57122064 Msa0739070:intron 30.0%
ACCATTGAATGTAATGATCA+AGG - chr5_1:57115327-57115346 Msa0739070:CDS 30.0%
ACCTTGATCATTACATTCAA+TGG + chr5_1:57115331-57115350 None:intergenic 30.0%
GTAATTCATCAGGAAACAAA+GGG + chr5_1:57122184-57122203 None:intergenic 30.0%
TGTAATTCATCAGGAAACAA+AGG + chr5_1:57122185-57122204 None:intergenic 30.0%
TGTTTCCTGATGAATTACAA+TGG - chr5_1:57122186-57122205 Msa0739070:CDS 30.0%
TCTTTCCATTGTAATTCATC+AGG + chr5_1:57115438-57115457 None:intergenic 30.0%
TGAATTACAATGGAAAGACA+TGG - chr5_1:57122196-57122215 Msa0739070:CDS 30.0%
TGCAAAGCAGTTTATTTGAA+TGG + chr5_1:57122243-57122262 None:intergenic 30.0%
! AGCAACAATTTTTCCACAAA+GGG - chr5_1:57115662-57115681 Msa0739070:intron 30.0%
TTAAGAGACTTTATCATTGC+AGG + chr5_1:57122515-57122534 None:intergenic 30.0%
TGCAATGATAAAGTCTCTTA+AGG - chr5_1:57122514-57122533 Msa0739070:CDS 30.0%
! GGATAAAGTTTGAGATGAGA+AGG + chr5_1:57115138-57115157 None:intergenic 35.0%
ATGCTGTCTATGAAAGAAAG+TGG + chr5_1:57115159-57115178 None:intergenic 35.0%
GGGTTGTAAAAGTAAAGCAA+TGG + chr5_1:57115201-57115220 None:intergenic 35.0%
GTAATTCATCAGGGAACAAA+GGG + chr5_1:57115428-57115447 None:intergenic 35.0%
TGTAATTCATCAGGGAACAA+AGG + chr5_1:57115429-57115448 None:intergenic 35.0%
TGTTCCCTGATGAATTACAA+TGG - chr5_1:57115430-57115449 Msa0739070:CDS 35.0%
!! ATAAATTGGTTTGCATGTGG+AGG - chr5_1:57115492-57115511 Msa0739070:CDS 35.0%
CCCTTAAGTTTACTTGATGT+AGG - chr5_1:57115639-57115658 Msa0739070:intron 35.0%
! GAGCAACAATTTTTCCACAA+AGG - chr5_1:57115661-57115680 Msa0739070:intron 35.0%
CTCTCTTTAACACCATTTCT+GGG + chr5_1:57115701-57115720 None:intergenic 35.0%
TCTCTCTTTAACACCATTTC+TGG + chr5_1:57115702-57115721 None:intergenic 35.0%
! AAGCATGCCGTTTCAATTAT+GGG - chr5_1:57115846-57115865 Msa0739070:intron 35.0%
TGTGGATCTTCGAAAAAGAA+TGG - chr5_1:57115902-57115921 Msa0739070:intron 35.0%
!! CCTACACATTTTTCAGACAA+CGG + chr5_1:57115933-57115952 None:intergenic 35.0%
CGTTGTCTGAAAAATGTGTA+GGG - chr5_1:57115931-57115950 Msa0739070:intron 35.0%
TGAAAAATGTGTAGGGAACA+TGG - chr5_1:57115938-57115957 Msa0739070:intron 35.0%
TAAGAATGAAATGGAACTCG+AGG - chr5_1:57115986-57116005 Msa0739070:intron 35.0%
!!! TTGGTTTTAGTAGTTGGTGT+AGG - chr5_1:57116253-57116272 Msa0739070:intron 35.0%
CCAAAATCTGCTTCATACAT+TGG + chr5_1:57116282-57116301 None:intergenic 35.0%
! CCAATGTATGAAGCAGATTT+TGG - chr5_1:57116279-57116298 Msa0739070:intron 35.0%
! TGTATGAAGCAGATTTTGGA+TGG - chr5_1:57116283-57116302 Msa0739070:intron 35.0%
! GTATGAAGCAGATTTTGGAT+GGG - chr5_1:57116284-57116303 Msa0739070:intron 35.0%
! TATGAAGCAGATTTTGGATG+GGG - chr5_1:57116285-57116304 Msa0739070:intron 35.0%
! GGTCTAATGGATACAAAAGA+TGG - chr5_1:57116357-57116376 Msa0739070:intron 35.0%
ATGGATACAAAAGATGGAGA+TGG - chr5_1:57116363-57116382 Msa0739070:intron 35.0%
AACATTGTTTGGATTACGAG+AGG + chr5_1:57116463-57116482 None:intergenic 35.0%
TCTCGTAATCCAAACAATGT+TGG - chr5_1:57116462-57116481 Msa0739070:intron 35.0%
!! GAGTTTTTCTCAATTTCTGG+TGG - chr5_1:57116682-57116701 Msa0739070:intron 35.0%
GCGACAAACTTGTGAAAATA+GGG + chr5_1:57116717-57116736 None:intergenic 35.0%
AGCGACAAACTTGTGAAAAT+AGG + chr5_1:57116718-57116737 None:intergenic 35.0%
GATCACGTTAGGAAAAGAAT+AGG + chr5_1:57116826-57116845 None:intergenic 35.0%
!! CTGATCTGACTGAGTTTTAA+TGG + chr5_1:57116919-57116938 None:intergenic 35.0%
TAAAACTCAGTCAGATCAGA+TGG - chr5_1:57116920-57116939 Msa0739070:intron 35.0%
ACAACAGAAACAATTCGAAC+AGG - chr5_1:57116976-57116995 Msa0739070:intron 35.0%
CAACAGAAACAATTCGAACA+GGG - chr5_1:57116977-57116996 Msa0739070:intron 35.0%
AACAGAAACAATTCGAACAG+GGG - chr5_1:57116978-57116997 Msa0739070:intron 35.0%
! GAGGATCAATTCTGGTTATT+AGG - chr5_1:57117003-57117022 Msa0739070:intron 35.0%
TTCGGTACGTAACAATAGTA+TGG + chr5_1:57117043-57117062 None:intergenic 35.0%
!!! CACGGGTATGTTTTGATTTT+CGG + chr5_1:57117061-57117080 None:intergenic 35.0%
AGTATTCCAAATCGGATTCA+CGG + chr5_1:57117079-57117098 None:intergenic 35.0%
AGAAATGATGCATCTGTAGT+TGG - chr5_1:57117359-57117378 Msa0739070:intron 35.0%
TTGTTTCCCTCATTCTGATT+TGG - chr5_1:57117505-57117524 Msa0739070:intron 35.0%
AAGAAAAGACTTCTGACTCT+GGG - chr5_1:57117696-57117715 Msa0739070:intron 35.0%
TTCAGGAAAGTTGTTGTGTT+CGG - chr5_1:57117742-57117761 Msa0739070:intron 35.0%
! AGCCTTATATGAGAAGAAGA+AGG + chr5_1:57117776-57117795 None:intergenic 35.0%
GATGGAAGAAGAATTTCTGA+TGG - chr5_1:57117808-57117827 Msa0739070:intron 35.0%
TAGTAATAATCGTCGATGCT+TGG + chr5_1:57117926-57117945 None:intergenic 35.0%
!! AGCATCGACGATTATTACTA+CGG - chr5_1:57117926-57117945 Msa0739070:intron 35.0%
! GAATATGATGGGGTTTCATT+GGG + chr5_1:57117961-57117980 None:intergenic 35.0%
! AACTGGTAATGATTTGACGA+TGG + chr5_1:57118097-57118116 None:intergenic 35.0%
GGGTTATGAAACAGATTCTT+GGG + chr5_1:57118139-57118158 None:intergenic 35.0%
TGGGTTATGAAACAGATTCT+TGG + chr5_1:57118140-57118159 None:intergenic 35.0%
! ACCCCTTTTTCTTACTTTGA+TGG - chr5_1:57118307-57118326 Msa0739070:intron 35.0%
! TCTTACTTTGATGGTCATCA+AGG - chr5_1:57118316-57118335 Msa0739070:intron 35.0%
ATTGAGATTTCTTGAATGGG+TGG - chr5_1:57118403-57118422 Msa0739070:intron 35.0%
TTGAGATTTCTTGAATGGGT+GGG - chr5_1:57118404-57118423 Msa0739070:intron 35.0%
AATGGGTGGGATACTAATAA+TGG - chr5_1:57118417-57118436 Msa0739070:intron 35.0%
ATGGGTGGGATACTAATAAT+GGG - chr5_1:57118418-57118437 Msa0739070:intron 35.0%
AGAAAATTAGCTCAAGCAGA+AGG + chr5_1:57118530-57118549 None:intergenic 35.0%
AAATCGTCAATTTGAGCCTT+TGG - chr5_1:57118556-57118575 Msa0739070:intron 35.0%
CCTCTTCGTAACAATTATCA+TGG + chr5_1:57118655-57118674 None:intergenic 35.0%
CCATGATAATTGTTACGAAG+AGG - chr5_1:57118652-57118671 Msa0739070:intron 35.0%
!! GTTGTTTTATAGTGCCATTC+AGG - chr5_1:57118751-57118770 Msa0739070:intron 35.0%
!! TGTTTTATAGTGCCATTCAG+GGG - chr5_1:57118753-57118772 Msa0739070:intron 35.0%
! AAGCTAGCACAATTTTTACG+AGG + chr5_1:57119143-57119162 None:intergenic 35.0%
! AACTCTCTCTTTGAAAACCA+TGG + chr5_1:57119188-57119207 None:intergenic 35.0%
ATATATGCTGAAGTTCTTGC+TGG - chr5_1:57119377-57119396 Msa0739070:intron 35.0%
! TTGCTATTCATCCAAAGACA+AGG - chr5_1:57119459-57119478 Msa0739070:intron 35.0%
ATCATGAATCTCCTTGTCTT+TGG + chr5_1:57119473-57119492 None:intergenic 35.0%
AAAGACAAGGAGATTCATGA+TGG - chr5_1:57119472-57119491 Msa0739070:intron 35.0%
TACTTACAATGGTCAACAGT+CGG + chr5_1:57119505-57119524 None:intergenic 35.0%
ACTTTCAAAATCGAAGTTGC+TGG + chr5_1:57119551-57119570 None:intergenic 35.0%
! AATTAGGGTTGATCTTTCTG+AGG - chr5_1:57119594-57119613 Msa0739070:CDS 35.0%
!! GTTTTCCTTCAAAGTACTCT+AGG - chr5_1:57119701-57119720 Msa0739070:CDS 35.0%
AAATACCACGATTAAAGTCG+AGG - chr5_1:57119774-57119793 Msa0739070:CDS 35.0%
ATCTTGGCATTTCACTCAAT+GGG - chr5_1:57119834-57119853 Msa0739070:CDS 35.0%
GTGGTTGTGTTGTCTAATAA+TGG + chr5_1:57120222-57120241 None:intergenic 35.0%
! CAAGGATAATGGTCAATAGT+AGG + chr5_1:57120261-57120280 None:intergenic 35.0%
! TCCTTCGTGTTTTCACATAT+TGG - chr5_1:57120342-57120361 Msa0739070:CDS 35.0%
ACCAATATGTGAAAACACGA+AGG + chr5_1:57120346-57120365 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr5_1:57121511-57121530 None:intergenic 35.0%
AAGGTTTGATTGTATCTCCA+TGG + chr5_1:57121859-57121878 None:intergenic 35.0%
! TATTTGAGATGAGAAGGAGT+TGG + chr5_1:57121887-57121906 None:intergenic 35.0%
! TTGGTCTATACTCTTGTTTG+GGG + chr5_1:57115220-57115239 None:intergenic 35.0%
!!! TGATCAAGGTGTGTTGTTTT+TGG - chr5_1:57122097-57122116 Msa0739070:CDS 35.0%
! AGGGTTCATCAATTTTTCTG+TGG + chr5_1:57122165-57122184 None:intergenic 35.0%
TACAATGGAAAGACATGGAT+TGG - chr5_1:57122201-57122220 Msa0739070:CDS 35.0%
CAAATAAACTGCTTTGCATG+TGG - chr5_1:57122245-57122264 Msa0739070:CDS 35.0%
ATTTGCACGAGTCACAAAAT+TGG - chr5_1:57122284-57122303 Msa0739070:CDS 35.0%
TTTCATCTTCCTCTAGCATT+TGG + chr5_1:57122358-57122377 None:intergenic 35.0%
CCTGCATCAAGTAAACTTAA+GGG + chr5_1:57122398-57122417 None:intergenic 35.0%
TCCTGCATCAAGTAAACTTA+AGG + chr5_1:57122399-57122418 None:intergenic 35.0%
! GAGCAACAATTTTTCCACAA+AGG - chr5_1:57115661-57115680 Msa0739070:intron 35.0%
AAAATAGGCAAATCCCTTTG+TGG + chr5_1:57122434-57122453 None:intergenic 35.0%
GATAAAGTCTCTTAAGGCAA+TGG - chr5_1:57122520-57122539 Msa0739070:CDS 35.0%
GTTACAACTTGTACATGTGT+GGG + chr5_1:57122569-57122588 None:intergenic 35.0%
AGTTACAACTTGTACATGTG+TGG + chr5_1:57122570-57122589 None:intergenic 35.0%
ATGTACAAGTTGTAACTGCA+TGG - chr5_1:57122573-57122592 Msa0739070:CDS 35.0%
ACTGCATGGATTTACAAGAA+TGG - chr5_1:57122587-57122606 Msa0739070:CDS 35.0%
! AGTTTGAGATGAGAAGGAGT+TGG + chr5_1:57115132-57115151 None:intergenic 40.0%
AAGATAGGCAAATCCCTTTG+TGG + chr5_1:57115678-57115697 None:intergenic 40.0%
TTTGCCTATCTTCCCAGAAA+TGG - chr5_1:57115686-57115705 Msa0739070:intron 40.0%
! AACACCATTTCTGGGAAGAT+AGG + chr5_1:57115693-57115712 None:intergenic 40.0%
TTCAGAGACTTGATCATTGC+AGG + chr5_1:57115759-57115778 None:intergenic 40.0%
TGCAATGATCAAGTCTCTGA+AGG - chr5_1:57115758-57115777 Msa0739070:intron 40.0%
! CAAGCATGCCGTTTCAATTA+TGG - chr5_1:57115845-57115864 Msa0739070:intron 40.0%
! AGCATGCCGTTTCAATTATG+GGG - chr5_1:57115847-57115866 Msa0739070:intron 40.0%
!! ACACATTTTTCAGACAACGG+AGG + chr5_1:57115930-57115949 None:intergenic 40.0%
CCGTTGTCTGAAAAATGTGT+AGG - chr5_1:57115930-57115949 Msa0739070:intron 40.0%
AATGTGTAGGGAACATGGTT+TGG - chr5_1:57115943-57115962 Msa0739070:intron 40.0%
TGAAATGGAACTCGAGGATT+TGG - chr5_1:57115992-57116011 Msa0739070:intron 40.0%
TTGGATGGGGAAAACCAATA+TGG - chr5_1:57116298-57116317 Msa0739070:intron 40.0%
CATTGAAGCTCTTGTGAACA+TGG - chr5_1:57116386-57116405 Msa0739070:intron 40.0%
!! TGACTGAGTTTTAATGGTCG+TGG + chr5_1:57116913-57116932 None:intergenic 40.0%
GTATTCCAAATCGGATTCAC+GGG + chr5_1:57117078-57117097 None:intergenic 40.0%
CGGACAACGATATATCGAAT+TGG + chr5_1:57117156-57117175 None:intergenic 40.0%
! TTCTGGAAACACGTCTCAAA+AGG + chr5_1:57117211-57117230 None:intergenic 40.0%
! TTTGAGACGTGTTTCCAGAA+TGG - chr5_1:57117211-57117230 Msa0739070:intron 40.0%
TGCTCACCAAATCAGAATGA+GGG + chr5_1:57117514-57117533 None:intergenic 40.0%
ATGCTCACCAAATCAGAATG+AGG + chr5_1:57117515-57117534 None:intergenic 40.0%
GAAGAAAAGACTTCTGACTC+TGG - chr5_1:57117695-57117714 Msa0739070:intron 40.0%
! GAAGAATTTCTGATGGGTAG+CGG - chr5_1:57117815-57117834 Msa0739070:intron 40.0%
GAAATGGGAGAAGAAGAAAG+TGG - chr5_1:57117839-57117858 Msa0739070:intron 40.0%
GGTCACATGTTTCATTGCTT+CGG + chr5_1:57117891-57117910 None:intergenic 40.0%
GACGATTATTACTACGGTCA+AGG - chr5_1:57117932-57117951 Msa0739070:intron 40.0%
! CGAATATGATGGGGTTTCAT+TGG + chr5_1:57117962-57117981 None:intergenic 40.0%
AAGATTGTGATTGTACGTGG+TGG + chr5_1:57118006-57118025 None:intergenic 40.0%
CTGAAGATTGTGATTGTACG+TGG + chr5_1:57118009-57118028 None:intergenic 40.0%
CACGTACAATCACAATCTTC+AGG - chr5_1:57118007-57118026 Msa0739070:intron 40.0%
!!! GATGGTTTTATACTGGGTCT+GGG + chr5_1:57118079-57118098 None:intergenic 40.0%
TCTCTTTGGATGTGTACAAC+TGG + chr5_1:57118114-57118133 None:intergenic 40.0%
CAGATTCTTGGGAATCTCTT+TGG + chr5_1:57118128-57118147 None:intergenic 40.0%
ATCTGTTTCATAACCCAGCT+TGG - chr5_1:57118143-57118162 Msa0739070:intron 40.0%
ATAACCCAGCTTGGTCTAAA+AGG - chr5_1:57118152-57118171 Msa0739070:intron 40.0%
! GAATCCTTTTAGACCAAGCT+GGG + chr5_1:57118159-57118178 None:intergenic 40.0%
! TGAATCCTTTTAGACCAAGC+TGG + chr5_1:57118160-57118179 None:intergenic 40.0%
TGGGTGGGATACTAATAATG+GGG - chr5_1:57118419-57118438 Msa0739070:intron 40.0%
ATCTCCTAAAGGTAGACCAA+AGG + chr5_1:57118575-57118594 None:intergenic 40.0%
CTTCATATCAAAAGCGGCTA+TGG - chr5_1:57118717-57118736 Msa0739070:intron 40.0%
GGCACTATAAAACAACTCAG+AGG + chr5_1:57118747-57118766 None:intergenic 40.0%
! TAGCACAATTTTTACGAGGC+GGG + chr5_1:57119139-57119158 None:intergenic 40.0%
! CTAGCACAATTTTTACGAGG+CGG + chr5_1:57119140-57119159 None:intergenic 40.0%
TGGATAATCAATGACACCAG+CGG + chr5_1:57119168-57119187 None:intergenic 40.0%
!! CTGGTGTCATTGATTATCCA+TGG - chr5_1:57119168-57119187 Msa0739070:intron 40.0%
! GAGAGAGTTTGTAGAGTACT+TGG - chr5_1:57119199-57119218 Msa0739070:intron 40.0%
! GTAGAGTACTTGGAACATGA+TGG - chr5_1:57119209-57119228 Msa0739070:intron 40.0%
!! TACTTGGAACATGATGGACT+GGG - chr5_1:57119215-57119234 Msa0739070:intron 40.0%
! CAAATTGACTCATCCTGAGT+GGG - chr5_1:57119247-57119266 Msa0739070:intron 40.0%
GAAGTCATTGGAAGTTCTCT+TGG - chr5_1:57119269-57119288 Msa0739070:intron 40.0%
! AAGGACCTAGAGTACTTTGA+AGG + chr5_1:57119709-57119728 None:intergenic 40.0%
TAAAGTCGAGGCTCAAATGA+TGG - chr5_1:57119786-57119805 Msa0739070:CDS 40.0%
CATTGAGTGAAATGCCAAGA+TGG + chr5_1:57119835-57119854 None:intergenic 40.0%
CATCTTGGCATTTCACTCAA+TGG - chr5_1:57119833-57119852 Msa0739070:CDS 40.0%
CATTTCACTCAATGGGATTC+AGG - chr5_1:57119841-57119860 Msa0739070:CDS 40.0%
AGGCTTTCATATCATTTGGG+TGG + chr5_1:57120241-57120260 None:intergenic 40.0%
TAGCCAATAAAATCTCAGCC+TGG - chr5_1:57120574-57120593 Msa0739070:CDS 40.0%
CTATTTGCCACAATTCAAGG+AGG + chr5_1:57120973-57120992 None:intergenic 40.0%
GCACTATTTGCCACAATTCA+AGG + chr5_1:57120976-57120995 None:intergenic 40.0%
GGCAAATAGTGCATTGTGAT+TGG - chr5_1:57120984-57121003 Msa0739070:intron 40.0%
!!! GACACTCATTTTGAAACGGA+TGG + chr5_1:57121507-57121526 None:intergenic 40.0%
GGAGAGGCAATTAATTACCA+TGG - chr5_1:57121839-57121858 Msa0739070:intron 40.0%
!!! TGTGTTGTTTTTGGCCACAA+AGG - chr5_1:57122106-57122125 Msa0739070:CDS 40.0%
ATAAACTGCTTTGCATGTGG+AGG - chr5_1:57122248-57122267 Msa0739070:CDS 40.0%
!! CTCTAGCATTTGGTTGATGA+TGG + chr5_1:57122348-57122367 None:intergenic 40.0%
CATCATCAACCAAATGCTAG+AGG - chr5_1:57122346-57122365 Msa0739070:CDS 40.0%
CCCTTAAGTTTACTTGATGC+AGG - chr5_1:57122395-57122414 Msa0739070:intron 40.0%
!! TGAGAAGGAGTTGGTGATGA+AGG + chr5_1:57115123-57115142 None:intergenic 45.0%
!! TTGGTTTGCATGTGGAGGAA+TGG - chr5_1:57115497-57115516 Msa0739070:CDS 45.0%
! GATCAAGTCTCTGAAGGCAA+TGG - chr5_1:57115764-57115783 Msa0739070:intron 45.0%
GTTACAACTTGTACGCGTGT+AGG + chr5_1:57115813-57115832 None:intergenic 45.0%
GCGTACAAGTTGTAACTGCT+TGG - chr5_1:57115817-57115836 Msa0739070:intron 45.0%
CCAATATGGATCACCACTAC+CGG - chr5_1:57116312-57116331 Msa0739070:intron 45.0%
AGAAATACTGTGGAAACCCG+AGG + chr5_1:57116516-57116535 None:intergenic 45.0%
! GCGTCAGTTGGTATCATAGT+AGG - chr5_1:57116795-57116814 Msa0739070:intron 45.0%
TTTCCTAACGTGATCAGCCA+TGG - chr5_1:57116831-57116850 Msa0739070:intron 45.0%
TTCCTAACGTGATCAGCCAT+GGG - chr5_1:57116832-57116851 Msa0739070:intron 45.0%
! TCGTGGTAAGAGTTGCTTTG+CGG + chr5_1:57116896-57116915 None:intergenic 45.0%
AGAAACAATTCGAACAGGGG+AGG - chr5_1:57116981-57117000 Msa0739070:intron 45.0%
ACATACCCGTGAATCCGATT+TGG - chr5_1:57117070-57117089 Msa0739070:intron 45.0%
GGAAACACGTCTCAAAAGGT+CGG + chr5_1:57117207-57117226 None:intergenic 45.0%
!!! ACTCAACAGTTTTGGGAAGC+TGG + chr5_1:57117622-57117641 None:intergenic 45.0%
ATGGGAGAAGAAGAAAGTGG+TGG - chr5_1:57117842-57117861 Msa0739070:intron 45.0%
! GATGCTTGGTTCGTAGAAGT+AGG + chr5_1:57117912-57117931 None:intergenic 45.0%
GAAACCCCATCATATTCGCA+TGG - chr5_1:57117964-57117983 Msa0739070:intron 45.0%
TGTGCCATGCGAATATGATG+GGG + chr5_1:57117971-57117990 None:intergenic 45.0%
GTGTGCCATGCGAATATGAT+GGG + chr5_1:57117972-57117991 None:intergenic 45.0%
TGTGTGCCATGCGAATATGA+TGG + chr5_1:57117973-57117992 None:intergenic 45.0%
!!! CGATGGTTTTATACTGGGTC+TGG + chr5_1:57118080-57118099 None:intergenic 45.0%
!! AATCAGGGGGTTTGGCTTTA+AGG + chr5_1:57118488-57118507 None:intergenic 45.0%
ACTCCATAGCTTCGAATCAG+GGG + chr5_1:57118502-57118521 None:intergenic 45.0%
CACTCCATAGCTTCGAATCA+GGG + chr5_1:57118503-57118522 None:intergenic 45.0%
TGAGCCTTTGGTCTACCTTT+AGG - chr5_1:57118568-57118587 Msa0739070:intron 45.0%
GCGAATGACTTTGCGTGAAT+GGG - chr5_1:57118775-57118794 Msa0739070:intron 45.0%
CGAATGACTTTGCGTGAATG+GGG - chr5_1:57118776-57118795 Msa0739070:intron 45.0%
!! GTACTTGGAACATGATGGAC+TGG - chr5_1:57119214-57119233 Msa0739070:intron 45.0%
CCACTCAGGATGAGTCAATT+TGG + chr5_1:57119249-57119268 None:intergenic 45.0%
! CCAAATTGACTCATCCTGAG+TGG - chr5_1:57119246-57119265 Msa0739070:intron 45.0%
TGTAATCTGACAGGTTCTCG+CGG + chr5_1:57119355-57119374 None:intergenic 45.0%
TGAAGTTCTTGCTGGTACCA+AGG - chr5_1:57119385-57119404 Msa0739070:intron 45.0%
TTGGCCCAGCCATTAATTGT+TGG - chr5_1:57119425-57119444 Msa0739070:intron 45.0%
TGGCCCAGCCATTAATTGTT+GGG - chr5_1:57119426-57119445 Msa0739070:intron 45.0%
CTGCCCAACAATTAATGGCT+GGG + chr5_1:57119432-57119451 None:intergenic 45.0%
ACACGCTGCCCAACAATTAA+TGG + chr5_1:57119437-57119456 None:intergenic 45.0%
TTGAGCCTCGACTTTAATCG+TGG + chr5_1:57119782-57119801 None:intergenic 45.0%
TCACTCAATGGGATTCAGGA+AGG - chr5_1:57119845-57119864 Msa0739070:CDS 45.0%
GAAGGTGGTCTCTTGTTCAT+TGG - chr5_1:57119863-57119882 Msa0739070:intron 45.0%
TTGGAGGAGTCAAACATGCA+TGG - chr5_1:57119882-57119901 Msa0739070:intron 45.0%
TGGAGGAGTCAAACATGCAT+GGG - chr5_1:57119883-57119902 Msa0739070:intron 45.0%
! GCGAGCTTCTTCTTTTTGAC+TGG - chr5_1:57120436-57120455 Msa0739070:CDS 45.0%
CAATAAAATCTCAGCCTGGC+CGG - chr5_1:57120578-57120597 Msa0739070:CDS 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG + chr5_1:57120956-57120975 None:intergenic 45.0%
!! TGAGAAGGAGTTGGTGATGA+AGG + chr5_1:57115123-57115142 None:intergenic 45.0%
! GCCTATTTTCCCAGAGATTG+CGG - chr5_1:57122445-57122464 Msa0739070:CDS 45.0%
! CCTATTTTCCCAGAGATTGC+GGG - chr5_1:57122446-57122465 Msa0739070:CDS 45.0%
!!! AATCAAAATAAAATATTTTA+GGG - chr5_1:57120290-57120309 Msa0739070:CDS 5.0%
!! ATACTATATATATATATAAT+TGG + chr5_1:57120378-57120397 None:intergenic 5.0%
TACGCGTGTAGGAGAATGCA+TGG + chr5_1:57115802-57115821 None:intergenic 50.0%
!! TCAGACGGCGTTGTTTTGCA+TGG - chr5_1:57115878-57115897 Msa0739070:intron 50.0%
! CCGGTAGTGGTGATCCATAT+TGG + chr5_1:57116315-57116334 None:intergenic 50.0%
CCTTGATGAACAACCGGTAG+TGG + chr5_1:57116328-57116347 None:intergenic 50.0%
! CCACTACCGGTTGTTCATCA+AGG - chr5_1:57116325-57116344 Msa0739070:intron 50.0%
GTGTGCTCCATTCATCACCT+CGG - chr5_1:57116496-57116515 Msa0739070:intron 50.0%
TGTGCTCCATTCATCACCTC+GGG - chr5_1:57116497-57116516 Msa0739070:intron 50.0%
TGGAAACCCGAGGTGATGAA+TGG + chr5_1:57116506-57116525 None:intergenic 50.0%
CGTCATCAGTTGATCTCCCA+TGG + chr5_1:57116851-57116870 None:intergenic 50.0%
! TGGGAGATCAACTGATGACG+AGG - chr5_1:57116851-57116870 Msa0739070:intron 50.0%
! GGGAGATCAACTGATGACGA+GGG - chr5_1:57116852-57116871 Msa0739070:intron 50.0%
!! GATGGCAGTGTTGACAGCTA+AGG - chr5_1:57116938-57116957 Msa0739070:intron 50.0%
AACAATTCGAACAGGGGAGG+AGG - chr5_1:57116984-57117003 Msa0739070:intron 50.0%
AGACGTGTTTCCAGAATGGC+AGG - chr5_1:57117215-57117234 Msa0739070:intron 50.0%
!!! AACAGTTTTGGGAAGCTGGC+TGG + chr5_1:57117618-57117637 None:intergenic 50.0%
AAGGCTCGCATCAGATGTGA+TGG - chr5_1:57117790-57117809 Msa0739070:intron 50.0%
GGAGAAGAAGAAAGTGGTGG+CGG - chr5_1:57117845-57117864 Msa0739070:intron 50.0%
!! ATTGCTTCGGCGCTGATTGA+AGG + chr5_1:57117878-57117897 None:intergenic 50.0%
TAGCTTCGAATCAGGGGGTT+TGG + chr5_1:57118496-57118515 None:intergenic 50.0%
! AACCCCCTGATTCGAAGCTA+TGG - chr5_1:57118496-57118515 Msa0739070:intron 50.0%
CTCCATAGCTTCGAATCAGG+GGG + chr5_1:57118501-57118520 None:intergenic 50.0%
CCACTCCATAGCTTCGAATC+AGG + chr5_1:57118504-57118523 None:intergenic 50.0%
! CCTGATTCGAAGCTATGGAG+TGG - chr5_1:57118501-57118520 Msa0739070:intron 50.0%
CAAAGTCATTCGCCCCTGAA+TGG + chr5_1:57118768-57118787 None:intergenic 50.0%
GGCGAATGACTTTGCGTGAA+TGG - chr5_1:57118774-57118793 Msa0739070:intron 50.0%
! ATGGGGTAGCTTTGCGTGAA+TGG - chr5_1:57118793-57118812 Msa0739070:intron 50.0%
! TGGGGTAGCTTTGCGTGAAT+GGG - chr5_1:57118794-57118813 Msa0739070:intron 50.0%
TTGCGTGAATGGGGTAGCAT+TGG - chr5_1:57118804-57118823 Msa0739070:intron 50.0%
CATCCTGAGTGGGAAGTCAT+TGG - chr5_1:57119257-57119276 Msa0739070:intron 50.0%
CTTCCAATGACTTCCCACTC+AGG + chr5_1:57119263-57119282 None:intergenic 50.0%
GTTCTTGCTGGTACCAAGGA+AGG - chr5_1:57119389-57119408 Msa0739070:intron 50.0%
GCTGCCCAACAATTAATGGC+TGG + chr5_1:57119433-57119452 None:intergenic 50.0%
CTCAATGGGATTCAGGAAGG+TGG - chr5_1:57119848-57119867 Msa0739070:CDS 50.0%
GGTGGTCTCTTGTTCATTGG+AGG - chr5_1:57119866-57119885 Msa0739070:intron 50.0%
CTCGAGGTCGAGTTCTTCAA+AGG - chr5_1:57119930-57119949 Msa0739070:intron 50.0%
GAGGTCGAGTTCTTCAAAGG+TGG - chr5_1:57119933-57119952 Msa0739070:intron 50.0%
GTCGAGTTCTTCAAAGGTGG+AGG - chr5_1:57119936-57119955 Msa0739070:intron 50.0%
AAGGTGGAGGAGACTGATGT+AGG - chr5_1:57119949-57119968 Msa0739070:intron 50.0%
TGGAGGAGACTGATGTAGGA+GGG - chr5_1:57119953-57119972 Msa0739070:intron 50.0%
! CGGCCAGGCTGAGATTTTAT+TGG + chr5_1:57120580-57120599 None:intergenic 50.0%
AGCCACACCTCCTTGAATTG+TGG - chr5_1:57120963-57120982 Msa0739070:intron 50.0%
TGCCACAATTCAAGGAGGTG+TGG + chr5_1:57120968-57120987 None:intergenic 50.0%
CTGCTTTGCATGTGGAGGAA+TGG - chr5_1:57122253-57122272 Msa0739070:CDS 50.0%
! CCCGCAATCTCTGGGAAAAT+AGG + chr5_1:57122449-57122468 None:intergenic 50.0%
CTCTCTTTCCCGCAATCTCT+GGG + chr5_1:57122457-57122476 None:intergenic 50.0%
TCTCTCTTTCCCGCAATCTC+TGG + chr5_1:57122458-57122477 None:intergenic 50.0%
!! GGCGTTGTTTTGCATGGCTG+TGG - chr5_1:57115884-57115903 Msa0739070:intron 55.0%
ACGCTTCTGACTGCGTCAGT+TGG - chr5_1:57116783-57116802 Msa0739070:intron 55.0%
CTCCCATGGCTGATCACGTT+AGG + chr5_1:57116837-57116856 None:intergenic 55.0%
CAGGGGAGGAGGATCAATTC+TGG - chr5_1:57116995-57117014 Msa0739070:intron 55.0%
CCAGAATGGCAGGTAACTCG+CGG - chr5_1:57117225-57117244 Msa0739070:intron 55.0%
CGAGGAGACTGATGAGAACG+TGG - chr5_1:57117397-57117416 Msa0739070:intron 55.0%
!!! GTTTTGGGAAGCTGGCTGGA+TGG + chr5_1:57117614-57117633 None:intergenic 55.0%
! TCTGATGGGTAGCGGCGAAA+TGG - chr5_1:57117823-57117842 Msa0739070:intron 55.0%
! CTGATGGGTAGCGGCGAAAT+GGG - chr5_1:57117824-57117843 Msa0739070:intron 55.0%
CGGCAGCAACATAAGCTTCC+TGG + chr5_1:57118618-57118637 None:intergenic 55.0%
! GGGGTAGCTTTGCGTGAATG+GGG - chr5_1:57118795-57118814 Msa0739070:intron 55.0%
! AATTGTGCTAGCTTCGCCGC+TGG - chr5_1:57119149-57119168 Msa0739070:intron 55.0%
ATCAGCAGGTAGGCCTTCCT+TGG + chr5_1:57119405-57119424 None:intergenic 55.0%
! GGAAGGCCTACCTGCTGATT+TGG - chr5_1:57119406-57119425 Msa0739070:intron 55.0%
AATGGCTGGGCCAAATCAGC+AGG + chr5_1:57119419-57119438 None:intergenic 55.0%
GTGGAGGAGACTGATGTAGG+AGG - chr5_1:57119952-57119971 Msa0739070:intron 55.0%
TCAGCCTGGCCGGAAATCAT+GGG - chr5_1:57120588-57120607 Msa0739070:intron 55.0%
ACCCACCACCCCATGATTTC+CGG + chr5_1:57120600-57120619 None:intergenic 55.0%
CCGCGAGTTACCTGCCATTC+TGG + chr5_1:57117228-57117247 None:intergenic 60.0%
GGCAGGTAACTCGCGGAAGA+CGG - chr5_1:57117232-57117251 Msa0739070:intron 60.0%
GCTGGGCCAAATCAGCAGGT+AGG + chr5_1:57119415-57119434 None:intergenic 60.0%
CTCAGCCTGGCCGGAAATCA+TGG - chr5_1:57120587-57120606 Msa0739070:intron 60.0%
CAGCCTGGCCGGAAATCATG+GGG - chr5_1:57120589-57120608 Msa0739070:intron 60.0%
GCCGGAAATCATGGGGTGGT+GGG - chr5_1:57120596-57120615 Msa0739070:intron 60.0%
CCACCCCATGATTTCCGGCC+AGG + chr5_1:57120595-57120614 None:intergenic 65.0%
CCTGGCCGGAAATCATGGGG+TGG - chr5_1:57120592-57120611 Msa0739070:intron 65.0%
GGCCGGAAATCATGGGGTGG+TGG - chr5_1:57120595-57120614 Msa0739070:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 57115084 57122625 57115084 ID=Msa0739070;Name=Msa0739070
chr5_1 mRNA 57115084 57122625 57115084 ID=Msa0739070-mRNA-1;Parent=Msa0739070;Name=Msa0739070-mRNA-1;_AED=0.26;_eAED=0.32;_QI=0|0|0|1|0|0.09|11|0|816
chr5_1 exon 57122403 57122625 57122403 ID=Msa0739070-mRNA-1:exon:16200;Parent=Msa0739070-mRNA-1
chr5_1 exon 57122235 57122390 57122235 ID=Msa0739070-mRNA-1:exon:16199;Parent=Msa0739070-mRNA-1
chr5_1 exon 57122064 57122225 57122064 ID=Msa0739070-mRNA-1:exon:16198;Parent=Msa0739070-mRNA-1
chr5_1 exon 57121855 57122048 57121855 ID=Msa0739070-mRNA-1:exon:16197;Parent=Msa0739070-mRNA-1
chr5_1 exon 57121604 57121827 57121604 ID=Msa0739070-mRNA-1:exon:16196;Parent=Msa0739070-mRNA-1
chr5_1 exon 57121255 57121434 57121255 ID=Msa0739070-mRNA-1:exon:16195;Parent=Msa0739070-mRNA-1
chr5_1 exon 57120421 57120600 57120421 ID=Msa0739070-mRNA-1:exon:16194;Parent=Msa0739070-mRNA-1
chr5_1 exon 57120183 57120408 57120183 ID=Msa0739070-mRNA-1:exon:16193;Parent=Msa0739070-mRNA-1
chr5_1 exon 57119681 57119874 57119681 ID=Msa0739070-mRNA-1:exon:16192;Parent=Msa0739070-mRNA-1
chr5_1 exon 57119482 57119634 57119482 ID=Msa0739070-mRNA-1:exon:16191;Parent=Msa0739070-mRNA-1
chr5_1 exon 57115084 57115642 57115084 ID=Msa0739070-mRNA-1:exon:16190;Parent=Msa0739070-mRNA-1
chr5_1 CDS 57122403 57122625 57122403 ID=Msa0739070-mRNA-1:cds;Parent=Msa0739070-mRNA-1
chr5_1 CDS 57122235 57122390 57122235 ID=Msa0739070-mRNA-1:cds;Parent=Msa0739070-mRNA-1
chr5_1 CDS 57122064 57122225 57122064 ID=Msa0739070-mRNA-1:cds;Parent=Msa0739070-mRNA-1
chr5_1 CDS 57121855 57122048 57121855 ID=Msa0739070-mRNA-1:cds;Parent=Msa0739070-mRNA-1
chr5_1 CDS 57121604 57121827 57121604 ID=Msa0739070-mRNA-1:cds;Parent=Msa0739070-mRNA-1
chr5_1 CDS 57121255 57121434 57121255 ID=Msa0739070-mRNA-1:cds;Parent=Msa0739070-mRNA-1
chr5_1 CDS 57120421 57120600 57120421 ID=Msa0739070-mRNA-1:cds;Parent=Msa0739070-mRNA-1
chr5_1 CDS 57120183 57120408 57120183 ID=Msa0739070-mRNA-1:cds;Parent=Msa0739070-mRNA-1
chr5_1 CDS 57119681 57119874 57119681 ID=Msa0739070-mRNA-1:cds;Parent=Msa0739070-mRNA-1
chr5_1 CDS 57119482 57119634 57119482 ID=Msa0739070-mRNA-1:cds;Parent=Msa0739070-mRNA-1
chr5_1 CDS 57115084 57115642 57115084 ID=Msa0739070-mRNA-1:cds;Parent=Msa0739070-mRNA-1
Gene Sequence

>Msa0739070

ATGGAGATTGAATTACTTTCAAGAGAAACAATCAAACCTTCATCACCAACTCCTTCTCATCTCAAACTTTATCCACTTTCTTTCATAGACAGCATTTATTTCAGTAACTATGTACCATTGCTTTACTTTTACAACCCAAACAAGAGTATAGACCAAAATTCAAAAATATCACAACTTCGAAAATCCTTATCTCAACTTTTATCTAAATACTATCATTTTGCTGATAAAACTACCATTGAATGTAATGATCAAGGTGTGTTATTTTTGGTCACAAAGGTAAAAAACAAACTGTCAGTGATTAGCCAAAATCCCACAGAAAAATTGTTAAACCCTTTGTTCCCTGATGAATTACAATGGAAAGAAATGGATTGGAGTGCAACCATTCAAATAAATTGGTTTGCATGTGGAGGAATGGTAATAAGTATTTGCATTAGTCACAAACTTGGTGATGCTGCAACCATTTTCAACTTCATGAATGATTGGGCCATTATAAACCAAAAGTTTGAGGAAGATGAAAAAGATTTAGTAGTATCACCCTTAAGAGCAACAATTTTTCCACAAAGGGATTTGCCTATCTTCCCAGAAATGGTGTTAAAGAGAGAAAACAATGTGGAGTTTAAAAGATTTGTTTTTCAACCTGCAATGATCAAGTCTCTGAAGGCAATGGTAACTTCTAGTTCCATGCATTCTCCTACACGCGTACAAGTTGTAACTGCTTGGATTTACAAGCATGCCACGGCGTTGTTTTGCATGGCTGTGGATCTTCGAAAAAGAATGGATCCTCCGTTGTCTGAAAAATGTGTAGGGAACATGGTTTGGTTTTCGTCTATGATGACAAATAAGAATGAAATGGAACTCGAGGATTTGGTCTACAAAATAAAAGAAGGGTTATCTGAGTGTTGTGAAGTTTATCCTAAAATGTTTAGAGAGATAGGGAAAAACAATTTGTTGATATCTGAGTTTCCAATGTATGAAGCAGATTTTGGATGGGGAAAACCAATATGGATCACCACTACCGGTTGTTCATCAAGGAATTATATTGGTCTAATGGATACAAAAGATGGAGATGGCATTGAAGCTCTTGTGAACATGGAAGAGAAATATATGGCTAAGTTTGAACATGAATTTAAGCTTCTTCAATATTACAACAAGTTGAAGGATGATTACTACAAGTTTAAAATCTCCAATTCGATATATCGTTGTCCGTTTTGTTACAACAAAGATTACTTCTTGACCGACCTTTTGAGACGTGTTTCCAGAATGGCAGGTAACTCGCGGAAGACGGTTAAAGATATTGCTAAACACTCTATTCTGATAATGTATCTTAATGTTAAAGTCGATGAAACATTTAACATCATTAATAATGACACAACTAAAAGAAATGATGCATCTGTAGTTGGAACTAATCAAATTATCGAGGAGACTGATGAGAACGTGGAACTGCAAACTCACTTTTCAGATTCTCAATCAATTAGAAACTTTCATATGTCAGGTGTAAATAGTTCTTCCAAGAAAGATAAATCTTGTTTCCCTCATTCTGATTTGCGGCGAAATGGGAGAAGAAGAAAGTGGTGGCGGATCATTTCCTTCAATCAGCGCCGAAGCAATGAAACATGTGACCTACTTCTACGAACCAAGCATCGACGATTATTACTACGGTCAAGGTCACCCAATGAAACCCCATCATATTCGCATGGCACACAATCTCATCAACCACCACGTACAATCACAATCTTCAGTCCCAGACCCAGTATAAAACCATCGTCAAATCATTACCAGTTGTACACATCCAAAGAGATTCCCAAGAATCTGTTTCATAACCCAGCTTGGTCTAAAAGGATTCAAATTAGTGCACTAGTTTTTGCTTCAAATGTGAGTTCTCAAGCTCCTATGATTAAAGATAAAATTACCATTGAATGTAATGATCAAGGTGTGTTGTTTTTGGCCACAAAGGTAAAAAACAAACTTTCAAATATTCTCCAAAATACCACAGAAAAATTGATGAACCCTTTGTTTCCTGATGAATTACAATGGAAAGACATGGATTGGAGTGCAAGTTTTATAGCCATTCAAATAAACTGCTTTGCATGTGGAGGAATGGTAATAAGTATTTGCACGAGTCACAAAATTGGTGATGCTTCAACCATTTTCAACTTCATGAATGATTGGGCCATCATCAACCAAATGCTAGAGGAAGATGAAAAAGAGTTATTAGTATCACCCTTAAGTTTACTTGATGCAGGAGCAACAATTTTTCCACAAAGGGATTTGCCTATTTTCCCAGAGATTGCGGGAAAGAGAGAAAACAATGTCGTATTTAAAAGGTTTGTTTTTCAACCTGCAATGATAAAGTCTCTTAAGGCAATGGTAACTTCTAGTTTCATGCATTCTCCCACACATGTACAAGTTGTAACTGCATGGATTTACAAGAATGGATCCTCCATTGTCTGA
Protein sequence

>Msa0739070

MEIELLSRETIKPSSPTPSHLKLYPLSFIDSIYFSNYVPLLYFYNPNKSIDQNSKISQLRKSLSQLLSKYYHFADKTTIECNDQGVLFLVTKVKNKLSVISQNPTEKLLNPLFPDELQWKEMDWSATIQINWFACGGMVISICISHKLGDAATIFNFMNDWAIINQKFEEDEKDLVVSPLRATIFPQRDLPIFPEMVLKRENNVEFKRFVFQPAMIKSLKAMVTSSSMHSPTRVQVVTAWIYKHATALFCMAVDLRKRMDPPLSEKCVGNMVWFSSMMTNKNEMELEDLVYKIKEGLSECCEVYPKMFREIGKNNLLISEFPMYEADFGWGKPIWITTTGCSSRNYIGLMDTKDGDGIEALVNMEEKYMAKFEHEFKLLQYYNKLKDDYYKFKISNSIYRCPFCYNKDYFLTDLLRRVSRMAGNSRKTVKDIAKHSILIMYLNVKVDETFNIINNDTTKRNDASVVGTNQIIEETDENVELQTHFSDSQSIRNFHMSGVNSSSKKDKSCFPHSDLRRNGRRRKWWRIISFNQRRSNETCDLLLRTKHRRLLLRSRSPNETPSYSHGTQSHQPPRTITIFSPRPSIKPSSNHYQLYTSKEIPKNLFHNPAWSKRIQISALVFASNVSSQAPMIKDKITIECNDQGVLFLATKVKNKLSNILQNTTEKLMNPLFPDELQWKDMDWSASFIAIQINCFACGGMVISICTSHKIGDASTIFNFMNDWAIINQMLEEDEKELLVSPLSLLDAGATIFPQRDLPIFPEIAGKRENNVVFKRFVFQPAMIKSLKAMVTSSFMHSPTHVQVVTAWIYKNGSSIV*