AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0740190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0740190 MtrunA17_Chr5g0440451 96.215 951 20 2 1 951 1 935 0.0 1887
Msa0740190 MtrunA17_Chr3g0118611 68.309 609 188 3 143 750 34 638 0.0 860
Msa0740190 MtrunA17_Chr3g0118611 67.808 146 46 1 806 950 628 773 7.35e-52 195
Msa0740190 MtrunA17_Chr5g0448761 42.663 661 337 9 47 683 59 701 0.0 550
Msa0740190 MtrunA17_Chr5g0448511 50.324 463 226 2 219 677 5 467 4.79e-163 489
Msa0740190 MtrunA17_Chr1g0202341 34.164 682 396 12 18 670 16 673 2.49e-124 392
Msa0740190 MtrunA17_Chr2g0287061 36.656 622 346 11 47 666 182 757 1.05e-112 365
Msa0740190 MtrunA17_Chr2g0287061 37.778 90 56 0 47 136 28 117 5.41e-12 70.1
Msa0740190 MtrunA17_Chr2g0329031 33.844 653 379 11 47 681 13 630 9.65e-111 358
Msa0740190 MtrunA17_Chr3g0080351 32.579 663 358 11 38 664 66 675 1.35e-109 358
Msa0740190 MtrunA17_Chr1g0207551 32.555 685 397 19 26 680 1 650 1.07e-107 352
Msa0740190 MtrunA17_Chr2g0296781 32.960 625 349 16 52 642 1 589 1.17e-91 307
Msa0740190 MtrunA17_Chr6g0477261 37.900 438 254 9 218 642 46 478 2.67e-91 304
Msa0740190 MtrunA17_Chr5g0441581 33.333 636 355 19 47 654 31 625 2.99e-91 305
Msa0740190 MtrunA17_Chr2g0291581 29.922 645 396 14 45 666 68 679 2.22e-89 300
Msa0740190 MtrunA17_Chr8g0363841 30.256 585 365 9 49 612 18 580 2.52e-89 299
Msa0740190 MtrunA17_Chr1g0203721 28.392 715 451 18 2 680 10 699 2.02e-81 282
Msa0740190 MtrunA17_Chr6g0458391 29.931 578 352 9 48 609 225 765 3.82e-81 279
Msa0740190 MtrunA17_Chr2g0291591 31.694 549 339 10 6 539 23 550 2.71e-78 266
Msa0740190 MtrunA17_Chr1g0196541 29.916 595 367 14 52 622 1 569 5.02e-76 264
Msa0740190 MtrunA17_Chr2g0287651 28.640 625 385 18 46 638 73 668 4.48e-73 258
Msa0740190 MtrunA17_Chr3g0082121 29.348 644 399 15 48 669 43 652 5.49e-72 252
Msa0740190 MtrunA17_Chr2g0324011 28.978 597 375 12 47 620 9 579 7.59e-72 249
Msa0740190 MtrunA17_Chr2g0276841 29.483 580 361 12 48 604 70 624 1.41e-68 242
Msa0740190 MtrunA17_Chr1g0198761 27.406 613 385 15 49 627 48 634 1.39e-64 232
Msa0740190 MtrunA17_Chr2g0294841 26.244 583 380 10 48 604 45 603 5.81e-57 210
Msa0740190 MtrunA17_Chr1g0203051 25.755 563 372 12 54 596 85 621 1.70e-56 206
Msa0740190 MtrunA17_Chr2g0290391 26.430 647 403 17 48 659 51 659 3.91e-54 201
Msa0740190 MtrunA17_Chr1g0164591 36.818 220 138 1 230 449 94 312 1.78e-43 160
Msa0740190 MtrunA17_Chr5g0431001 25.412 425 273 10 48 447 61 466 1.97e-38 150
Msa0740190 MtrunA17_Chr7g0258861 29.677 310 172 7 47 334 9 294 4.01e-35 136
Msa0740190 MtrunA17_Chr2g0308841 25.221 226 162 3 383 605 2 223 3.58e-19 88.6
Msa0740190 MtrunA17_Chr2g0329361 36.066 122 63 1 47 153 60 181 8.56e-18 84.3
Msa0740190 MtrunA17_Chr7g0254601 47.423 97 48 1 806 899 184 280 5.28e-17 82.4
Msa0740190 MtrunA17_Chr7g0233911 34.109 129 66 3 27 136 8 136 1.25e-16 79.7
Msa0740190 MtrunA17_Chr3g0078041 40.566 106 49 1 47 138 49 154 1.42e-15 77.0
Msa0740190 MtrunA17_Chr4g0033611 39.216 102 50 2 47 136 75 176 5.65e-15 75.9
Msa0740190 MtrunA17_Chr2g0329421 36.538 104 54 2 45 136 24 127 1.90e-13 70.5
Msa0740190 MtrunA17_Chr6g0476441 37.931 87 53 1 557 642 8 94 3.99e-12 68.2
Msa0740190 MtrunA17_Chr1g0149131 25.455 110 82 0 331 440 1 110 2.04e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0740190 AT2G27110.2 50.553 904 367 17 1 890 1 838 0.0 850
Msa0740190 AT2G27110.2 62.329 146 54 1 806 950 705 850 3.14e-46 179
Msa0740190 AT2G27110.1 50.553 904 367 17 1 890 1 838 0.0 850
Msa0740190 AT2G27110.1 62.329 146 54 1 806 950 705 850 3.14e-46 179
Msa0740190 AT2G27110.3 53.625 731 269 13 168 887 19 690 0.0 752
Msa0740190 AT2G27110.3 62.329 146 54 1 806 950 560 705 8.30e-47 179
Msa0740190 AT4G38180.1 41.324 680 358 7 24 681 49 709 0.0 557
Msa0740190 AT4G38170.1 48.182 440 221 3 230 666 21 456 1.01e-143 439
Msa0740190 AT3G06250.2 37.102 628 343 9 41 666 183 760 1.91e-122 390
Msa0740190 AT3G06250.2 39.560 91 55 0 47 137 27 117 1.22e-15 82.0
Msa0740190 AT3G06250.1 37.102 628 343 9 41 666 183 760 1.91e-122 390
Msa0740190 AT3G06250.1 39.560 91 55 0 47 137 27 117 1.22e-15 82.0
Msa0740190 AT3G06250.3 37.102 628 343 9 41 666 183 760 1.91e-122 390
Msa0740190 AT3G06250.3 39.560 91 55 0 47 137 27 117 1.22e-15 82.0
Msa0740190 AT5G18960.2 36.364 649 352 13 24 666 191 784 7.11e-119 382
Msa0740190 AT5G18960.2 39.604 101 61 0 47 147 42 142 2.50e-17 87.8
Msa0740190 AT5G18960.1 36.364 649 352 13 24 666 191 784 7.11e-119 382
Msa0740190 AT5G18960.1 39.604 101 61 0 47 147 42 142 2.50e-17 87.8
Msa0740190 AT4G15090.1 33.937 663 382 12 47 684 50 681 2.18e-116 376
Msa0740190 AT4G15090.5 33.937 663 382 12 47 684 50 681 2.18e-116 376
Msa0740190 AT4G15090.3 33.937 663 382 12 47 684 50 681 2.18e-116 376
Msa0740190 AT4G15090.2 33.937 663 382 12 47 684 50 681 2.18e-116 376
Msa0740190 AT4G15090.4 33.937 663 382 12 47 684 50 681 2.18e-116 376
Msa0740190 AT3G22170.2 30.928 679 381 12 14 659 41 664 1.17e-105 348
Msa0740190 AT3G22170.1 30.928 679 381 12 14 659 41 664 1.17e-105 348
Msa0740190 AT1G76320.3 31.661 638 387 10 52 673 1 605 1.00e-99 327
Msa0740190 AT1G76320.1 31.661 638 387 10 52 673 1 605 1.67e-99 328
Msa0740190 AT1G76320.4 31.661 638 387 10 52 673 1 605 1.67e-99 328
Msa0740190 AT1G76320.2 31.661 638 387 10 52 673 1 605 1.92e-99 328
Msa0740190 AT2G32250.5 30.687 655 370 10 18 660 16 598 4.94e-94 315
Msa0740190 AT2G32250.2 30.687 655 370 10 18 660 16 598 8.23e-94 315
Msa0740190 AT2G32250.4 30.687 655 370 10 18 660 16 598 8.23e-94 315
Msa0740190 AT2G32250.6 30.687 655 370 10 18 660 16 598 1.00e-93 315
Msa0740190 AT2G32250.1 30.687 655 370 10 18 660 16 598 1.00e-93 315
Msa0740190 AT2G32250.3 30.687 655 370 10 18 660 16 598 1.00e-93 315
Msa0740190 AT2G32250.8 30.757 621 354 8 52 660 1 557 9.80e-93 311
Msa0740190 AT2G32250.7 30.757 621 354 8 52 660 1 557 1.43e-92 311
Msa0740190 AT1G52520.1 29.741 696 421 17 6 666 33 695 9.89e-87 293
Msa0740190 AT4G19990.1 37.473 459 275 7 214 665 103 556 2.66e-86 291
Msa0740190 AT4G19990.3 37.473 459 275 7 214 665 160 613 9.24e-86 291
Msa0740190 AT4G19990.4 37.473 459 275 7 214 665 160 613 9.24e-86 291
Msa0740190 AT4G19990.5 37.473 459 275 7 214 665 160 613 1.32e-85 291
Msa0740190 AT4G19990.6 37.473 459 275 7 214 665 160 613 1.76e-85 291
Msa0740190 AT4G19990.2 37.473 459 275 7 214 665 160 613 1.76e-85 291
Msa0740190 AT4G19990.7 37.473 459 275 7 214 665 174 627 1.96e-85 291
Msa0740190 AT1G80010.1 29.521 647 410 15 48 669 95 720 2.75e-81 279
Msa0740190 AT1G10240.2 27.795 644 405 14 48 661 48 661 2.14e-66 236
Msa0740190 AT1G10240.1 27.795 644 405 14 48 661 48 661 2.14e-66 236
Msa0740190 AT5G28530.3 27.692 585 376 12 48 608 55 616 4.24e-60 218
Msa0740190 AT5G28530.2 27.692 585 376 12 48 608 55 616 4.24e-60 218
Msa0740190 AT5G28530.1 27.598 587 378 12 48 608 55 620 4.84e-60 218
Msa0740190 AT5G28530.5 30.032 313 205 5 299 608 252 553 8.00e-35 142
Msa0740190 AT5G28530.4 29.841 315 207 5 299 608 252 557 1.19e-34 141
Msa0740190 AT4G12850.4 33.594 128 73 2 39 154 2 129 7.35e-18 81.6
Msa0740190 AT3G59470.3 34.899 149 75 4 8 144 39 177 2.45e-17 83.2
Msa0740190 AT3G59470.1 34.899 149 75 4 8 144 39 177 2.45e-17 83.2
Msa0740190 AT3G59470.2 34.899 149 75 4 8 144 51 189 3.44e-17 83.2
Msa0740190 AT4G12850.1 35.185 108 60 1 39 136 2 109 1.84e-16 79.0
Msa0740190 AT4G12850.2 35.185 108 60 1 39 136 2 109 3.08e-16 77.0
Msa0740190 AT2G43280.1 36.607 112 57 1 41 138 15 126 6.50e-16 78.2
Msa0740190 AT3G07500.1 38.835 103 50 2 47 136 32 134 2.22e-15 76.6

Find 261 sgRNAs with CRISPR-Local

Find 481 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGATAATGCCCGGGTTTC+TGG 0.076489 5_1:-59011563 Msa0740190:CDS
CAATCTGGGTTGCTTGATTT+TGG 0.133503 5_1:-59016130 Msa0740190:five_prime_UTR
CCCAGTCCTTTGTAAGTTTC+AGG 0.139099 5_1:+59015521 None:intergenic
AGGACAGCTTACAGTCATTT+TGG 0.226964 5_1:-59015197 Msa0740190:CDS
ATGGGTTGCCTCACATTATA+AGG 0.229489 5_1:+59015365 None:intergenic
GATGGGGTGAATAGCATATT+TGG 0.271792 5_1:-59014387 Msa0740190:CDS
GATGATTCTGAGGCTTCTTT+TGG 0.273886 5_1:-59015056 Msa0740190:CDS
TTTCATAATCTTCTGATTGT+AGG 0.279900 5_1:+59016493 None:intergenic
ACTCATTGTAATTGATTGTT+TGG 0.290282 5_1:+59010701 None:intergenic
TAGAGTTCATAGTGAAAATA+AGG 0.298312 5_1:+59014849 None:intergenic
CAACATTACCAATGTTCTTT+AGG 0.301189 5_1:-59014608 Msa0740190:CDS
ATCGTATGTCTAATGTGTTT+TGG 0.301976 5_1:-59015235 Msa0740190:CDS
TTAGGGAAGAGTTAGGGTTT+TGG 0.303992 5_1:+59016548 None:intergenic
CATAATGTGGATGCTGAATT+TGG 0.311841 5_1:-59015947 Msa0740190:CDS
TCAATTACAATGAGTAGAAA+TGG 0.315457 5_1:-59010693 Msa0740190:three_prime_UTR
TTAACCTCATATTCTGTTGA+TGG 0.333158 5_1:+59012879 None:intergenic
GTGTCCCGTCAGCGAGTTGA+TGG 0.355021 5_1:-59013676 Msa0740190:CDS
AGAGTCACTATATCCAAGTT+TGG 0.365829 5_1:-59010611 Msa0740190:three_prime_UTR
TTGTTTGATAGGAAAGGATT+TGG 0.371906 5_1:-59010745 Msa0740190:three_prime_UTR
GACGGTGTTAGGGAAGAGTT+AGG 0.383454 5_1:+59016541 None:intergenic
GAGGGATGCTCGGGACCTGC+TGG 0.384203 5_1:-59015324 Msa0740190:CDS
GGCGAAGGTGTCTTTAGAAC+TGG 0.389519 5_1:+59014513 None:intergenic
TCAACTCGCTGACGAGGCAC+TGG 0.390203 5_1:+59013745 None:intergenic
CAACTCGCTGACGAGGCATT+GGG 0.391167 5_1:+59013713 None:intergenic
GTTTATGCAGTGACGTGCTT+GGG 0.392754 5_1:+59014929 None:intergenic
CGTGCCACTGGGGTCGTTTG+TGG 0.394528 5_1:+59013790 None:intergenic
AGATCAGCCATTGGTTGAAC+AGG 0.395974 5_1:+59013820 None:intergenic
TACTCTGTTCTCTGGATTTG+AGG 0.396619 5_1:+59013159 None:intergenic
ACCTTCGCCAATGGAGAATC+AGG 0.397585 5_1:-59014499 Msa0740190:CDS
GTGCCATATGCTCCATTCAC+TGG 0.397710 5_1:-59015128 Msa0740190:CDS
AGTTGTTTCATTGTTTGTAA+TGG 0.398936 5_1:-59016014 Msa0740190:exon
CACGGTCAGTTTAATGCTGA+TGG 0.401096 5_1:-59015758 Msa0740190:CDS
TCATGCTGAGGGTATGGTTT+CGG 0.402062 5_1:-59015894 Msa0740190:CDS
AGCAAAAGGGTCAAAATAAG+TGG 0.402254 5_1:-59015649 Msa0740190:CDS
CAGCATATCTGATGGCTTCC+CGG 0.407610 5_1:+59014091 None:intergenic
CATCTCGCTGACGAGGCATT+GGG 0.408269 5_1:+59013614 None:intergenic
TTGCTCTATGTGTTGTGTCC+AGG 0.409123 5_1:+59015162 None:intergenic
TCAACTCGCTGACGGGACAC+TGG 0.414066 5_1:+59013679 None:intergenic
CTGACAATAGTCAAAAGATT+AGG 0.415523 5_1:-59015445 Msa0740190:CDS
TGTATAGTGCTCGTGATCAA+TGG 0.420791 5_1:-59014725 Msa0740190:CDS
ATCCTCTTCGATTCTGTTGG+CGG 0.420813 5_1:+59014407 None:intergenic
AAGTTAAGTTTCAAGTATCC+AGG 0.425548 5_1:-59011532 Msa0740190:CDS
TCATCTTGCTGAAGAGGCGC+TGG 0.427906 5_1:+59013580 None:intergenic
GACATTAGGGAGGGATGCTC+GGG 0.428100 5_1:-59015333 Msa0740190:CDS
TGAAGTAGGGGTTCTCTTGT+CGG 0.428439 5_1:+59013924 None:intergenic
TCATCTCGCTGACGAGGCAT+TGG 0.429820 5_1:+59013613 None:intergenic
TATGCTAAATAAATTTAAAC+AGG 0.430381 5_1:-59010496 None:intergenic
TCAACTTGCTTACGTGCCAC+TGG 0.432157 5_1:+59013778 None:intergenic
ATGAACTCAGAGGGCATGAT+TGG 0.432731 5_1:-59014758 Msa0740190:CDS
ACTCCTCAATTGTTTCTGTC+AGG 0.433646 5_1:+59014814 None:intergenic
TGCCTGAAAACTCAAACATT+TGG 0.440083 5_1:+59014286 None:intergenic
ATGAACTAGCTCTGGAGAAA+TGG 0.440287 5_1:-59014581 Msa0740190:CDS
CTGATGGGACAAATATGTTC+CGG 0.441063 5_1:-59015742 Msa0740190:CDS
AAAGTTGCGAGGCGATGATT+AGG 0.441916 5_1:-59015676 Msa0740190:CDS
GGGGCAAAACGACGGTGTTA+GGG 0.442878 5_1:+59016531 None:intergenic
TCCGGGAGTTTGTGTGTAGC+AGG 0.444056 5_1:-59015724 Msa0740190:CDS
AGGTTAAGTTCCATCTCTCT+CGG 0.446028 5_1:-59012863 Msa0740190:CDS
AGAGTGTTGCATAGCATAGC+AGG 0.447327 5_1:+59016621 None:intergenic
GATGATTAGGATAGAGCAAA+AGG 0.447571 5_1:-59015663 Msa0740190:CDS
CACGGTATGCCAATCTGTGC+CGG 0.447645 5_1:-59014110 Msa0740190:CDS
AGGCAGAAGACTTGTTTGAT+AGG 0.447995 5_1:-59010756 Msa0740190:three_prime_UTR
TCAACTCGCTGACGAGGCAT+TGG 0.448513 5_1:+59013712 None:intergenic
TGATGGGACAAATATGTTCC+GGG 0.449990 5_1:-59015741 Msa0740190:CDS
ACGGTAGTTGTCACCAAACT+TGG 0.450400 5_1:+59010598 None:intergenic
TCAAGTATCCAGGGATGCAT+TGG 0.450589 5_1:-59011522 Msa0740190:CDS
CATCTTGCTGAAGAGGCGCT+GGG 0.450975 5_1:+59013581 None:intergenic
ACAAAATCATTTGACCATGA+TGG 0.454962 5_1:+59015099 None:intergenic
TGAAGTCTATGACTGAAGTC+GGG 0.455020 5_1:-59012821 Msa0740190:CDS
TTCTCTGGCGGTACCTGATA+AGG 0.456816 5_1:-59015594 Msa0740190:CDS
CCCATCCTCTTCGATTCTGT+TGG 0.457757 5_1:+59014404 None:intergenic
CGCTGACGAGGCACTGGGGA+TGG 0.458341 5_1:+59013751 None:intergenic
TGTCTCAGCTTGATAATGCC+CGG 0.459217 5_1:-59011571 Msa0740190:intron
CGCCTACGAGGCACTGGTCG+TGG 0.461327 5_1:+59013652 None:intergenic
GCAGGGAAGGTTTGAAAAGA+AGG 0.461483 5_1:-59015706 Msa0740190:CDS
TCTAAGTTTCATTTAATAGC+CGG 0.463354 5_1:-59010928 Msa0740190:three_prime_UTR
CACAGCACCCAATGCATCCC+TGG 0.463515 5_1:+59011514 None:intergenic
GAAGTCAATGACGTGGGTAA+TGG 0.464484 5_1:-59013191 Msa0740190:CDS
TGCTCTATGTGTTGTGTCCA+GGG 0.469368 5_1:+59015163 None:intergenic
GTGCCTCGTAGGCGAGTTGA+TGG 0.469828 5_1:-59013643 Msa0740190:CDS
ACAACGGCTACTCTGTTCTC+TGG 0.470800 5_1:+59013151 None:intergenic
ATCCCAGTGAATGGAGCATA+TGG 0.472427 5_1:+59015125 None:intergenic
GAAGTAGGGGTTCTCTTGTC+GGG 0.472681 5_1:+59013925 None:intergenic
TCAAATACCATGCCCAAATA+CGG 0.473294 5_1:+59015854 None:intergenic
GGACTGGGGCTTGTTCCAAC+TGG 0.474446 5_1:-59015506 Msa0740190:CDS
CGCTGACGGGACACTGGGGA+TGG 0.475905 5_1:+59013685 None:intergenic
GCCTGAAACTTACAAAGGAC+TGG 0.476526 5_1:-59015522 Msa0740190:CDS
AATTGATTGTTTGGAGCTGC+AGG 0.477791 5_1:+59010710 None:intergenic
GGGATCTCATGCTGAGGGTA+TGG 0.478915 5_1:-59015900 Msa0740190:CDS
GTCGATGTTTCATCGTTAAG+TGG 0.478980 5_1:+59013868 None:intergenic
GTATAGTGCTCGTGATCAAT+GGG 0.479907 5_1:-59014724 Msa0740190:CDS
CTTGTATCTGATGTTGAAGT+AGG 0.481986 5_1:+59013910 None:intergenic
CAACTAATCATCGACTCAGC+TGG 0.482359 5_1:-59013963 Msa0740190:CDS
CAAGTATCCAGGGATGCATT+GGG 0.482761 5_1:-59011521 Msa0740190:CDS
AGTGAGTATGCTAGACGGTC+GGG 0.482860 5_1:-59015803 Msa0740190:CDS
TTTGGTCAAGTTAATGATGC+TGG 0.483303 5_1:-59015929 Msa0740190:CDS
CAATTACAATGAGTAGAAAT+GGG 0.483874 5_1:-59010692 Msa0740190:three_prime_UTR
CGCTGACGAGGCATTGGGGA+TGG 0.486572 5_1:+59013619 None:intergenic
CAACTCGCTGACGGGACACT+GGG 0.489146 5_1:+59013680 None:intergenic
ATGATTAGTTGATGACACTT+TGG 0.490968 5_1:+59013975 None:intergenic
GAAGACTTGTTTGATAGGAA+AGG 0.492059 5_1:-59010751 Msa0740190:three_prime_UTR
ACACTAGAAAAGTGCTTCAC+TGG 0.492664 5_1:+59015557 None:intergenic
TCAGTCATAGACTTCAAAAC+AGG 0.492669 5_1:+59012828 None:intergenic
TTGAAGTCTATGACTGAAGT+CGG 0.493526 5_1:-59012822 Msa0740190:CDS
AGACATTAGGGAGGGATGCT+CGG 0.493941 5_1:-59015334 Msa0740190:CDS
TTGTATCTGATGTTGAAGTA+GGG 0.495979 5_1:+59013911 None:intergenic
TCTGGAGAAATGGTTTGAAA+AGG 0.496885 5_1:-59014571 Msa0740190:CDS
ACTTATGATGCTGCAATGAC+TGG 0.497681 5_1:-59014045 Msa0740190:CDS
CGCTGACGAGGCATTGGGGA+TGG 0.497742 5_1:+59013718 None:intergenic
CAACTTGCTTACGTGCCACT+GGG 0.498429 5_1:+59013779 None:intergenic
AAGCTCCGCCGTTGCAGAGT+CGG 0.499750 5_1:+59016577 None:intergenic
TCCTTTGTAAGTTTCAGGCA+TGG 0.500821 5_1:+59015526 None:intergenic
AGCTCAAAAGCTGGTTTGCA+CGG 0.501825 5_1:-59015776 Msa0740190:CDS
CACGTCATTGACTTCAAAGA+TGG 0.501878 5_1:+59013199 None:intergenic
GAGTCCATCAACAGAATATG+AGG 0.503904 5_1:-59012883 Msa0740190:CDS
GATGGCTTCCCGGCACAGAT+TGG 0.505149 5_1:+59014101 None:intergenic
TGTTTATGCAGTGACGTGCT+TGG 0.505307 5_1:+59014928 None:intergenic
ATGGGTTTAAGAACATGTCC+AGG 0.505651 5_1:-59010674 Msa0740190:three_prime_UTR
AATGAATCACGGAAATATGC+TGG 0.507187 5_1:+59014699 None:intergenic
GAAGGAACATAGCCATTCTC+TGG 0.512692 5_1:-59015609 Msa0740190:CDS
GTTAATGATGCTGGAAACTC+GGG 0.514570 5_1:-59015920 Msa0740190:CDS
AGTTAATGATGCTGGAAACT+CGG 0.515040 5_1:-59015921 Msa0740190:CDS
CTAAGTTTCATTTAATAGCC+GGG 0.516158 5_1:-59010927 Msa0740190:three_prime_UTR
ATGCCTCGTCAGCGAGATGA+TGG 0.517544 5_1:-59013610 Msa0740190:CDS
TTCGGAGCCGTATTTGGGCA+TGG 0.517562 5_1:-59015861 Msa0740190:CDS
TTTGGGCAGATGCAAGATCA+AGG 0.517733 5_1:-59015217 Msa0740190:CDS
TGTTTGGAGCTGCAGGGTAG+AGG 0.518228 5_1:+59010717 None:intergenic
CTTCAGACTCGCCAGAAACC+CGG 0.518277 5_1:+59011552 None:intergenic
TAGGCAGTATGAACTAGCTC+TGG 0.519286 5_1:-59014589 Msa0740190:CDS
GATATATACATGACACCAGT+TGG 0.519725 5_1:+59015491 None:intergenic
GGGTGCTGTGCTACGATCAA+TGG 0.520286 5_1:-59011501 Msa0740190:CDS
TGATGGTTTATCCCAGTGAA+TGG 0.520311 5_1:+59015116 None:intergenic
CATCCCACTACATCTTAAAA+CGG 0.520600 5_1:-59014209 Msa0740190:CDS
CCTGAAACTTACAAAGGACT+GGG 0.522711 5_1:-59015521 Msa0740190:CDS
CAACTCGCTGACGAGGCACT+GGG 0.522831 5_1:+59013746 None:intergenic
TCGGGTTTCAGCTCAAAAGC+TGG 0.523459 5_1:-59015785 Msa0740190:CDS
AGGGGTTCTCTTGTCGGGAT+CGG 0.524735 5_1:+59013930 None:intergenic
GATGTTCATGTGATAACTAT+CGG 0.525824 5_1:-59015992 Msa0740190:CDS
TGGACCATCAACTCGCTGAC+GGG 0.526834 5_1:+59013672 None:intergenic
TTAGCAACCTGATTCTCCAT+TGG 0.527218 5_1:+59014492 None:intergenic
TATCAGGTACCGCCAGAGAA+TGG 0.527369 5_1:+59015597 None:intergenic
TGTATTGCATAGAAGAAACC+AGG 0.531582 5_1:+59015272 None:intergenic
TGTAGGTGTGTGAACAATGC+GGG 0.533824 5_1:+59016510 None:intergenic
GCGCCTCTTCAGCAAGATGA+TGG 0.535172 5_1:-59013577 Msa0740190:CDS
ATAACTATCGGAGAAGGAAG+TGG 0.536867 5_1:-59015980 Msa0740190:CDS
TCTCTCTATAACTACCGATC+AGG 0.536976 5_1:-59014988 Msa0740190:CDS
AACACTCTCTCTCTTTCTCT+CGG 0.537236 5_1:-59016606 Msa0740190:five_prime_UTR
GTGAGTAATTAGTATTCATA+CGG 0.537548 5_1:+59010579 None:intergenic
GAGTTTGTGTGTAGCAGGGA+AGG 0.537943 5_1:-59015719 Msa0740190:CDS
TCTTGCTGAAGAGGCGCTGG+GGG 0.539141 5_1:+59013583 None:intergenic
CCATCTCTCTCGGGTTACTG+TGG 0.539645 5_1:-59012853 Msa0740190:CDS
GGTTAAGTTCCATCTCTCTC+GGG 0.539950 5_1:-59012862 Msa0740190:CDS
TCAACTCGCCTACGAGGCAC+TGG 0.539984 5_1:+59013646 None:intergenic
AGTTAGCTCTCAATTCAGAC+TGG 0.540099 5_1:+59014316 None:intergenic
TGCCATATGCTCCATTCACT+GGG 0.541819 5_1:-59015127 Msa0740190:CDS
CCCTGCTACACACAAACTCC+CGG 0.542869 5_1:+59015723 None:intergenic
ACTCATATTTGATGATTCTG+AGG 0.543525 5_1:-59015066 Msa0740190:CDS
CATCTCTCTCGGGTTACTGT+GGG 0.544255 5_1:-59012852 Msa0740190:CDS
GGTAAATTCAGATCAGCCAT+TGG 0.544409 5_1:+59013811 None:intergenic
GTCTCAGCTTGATAATGCCC+GGG 0.544869 5_1:-59011570 Msa0740190:intron
CTTCTCCGACTCTGCAACGG+CGG 0.545429 5_1:-59016582 Msa0740190:five_prime_UTR
CGATGCTCCTGTTCAACCAA+TGG 0.548780 5_1:-59013827 Msa0740190:CDS
TCGTTAAGTGGCCATAAAAG+AGG 0.548903 5_1:+59013880 None:intergenic
TAGTGAGTATGCTAGACGGT+CGG 0.552667 5_1:-59015804 Msa0740190:CDS
CTTTCATAAAATACTCCAGC+AGG 0.556028 5_1:+59015309 None:intergenic
GGACCATCATCTTGCTGAAG+AGG 0.556157 5_1:+59013574 None:intergenic
ACGGTATGCCAATCTGTGCC+GGG 0.557330 5_1:-59014109 Msa0740190:CDS
TTCAGACTCGCCAGAAACCC+GGG 0.560618 5_1:+59011553 None:intergenic
CAACAGAATCGAAGAGGATG+GGG 0.561342 5_1:-59014403 Msa0740190:CDS
ATCTTGCTGAAGAGGCGCTG+GGG 0.561388 5_1:+59013582 None:intergenic
CCAACAGAATCGAAGAGGAT+GGG 0.561771 5_1:-59014404 Msa0740190:CDS
CGTTAAGTGGCCATAAAAGA+GGG 0.562134 5_1:+59013881 None:intergenic
AAGGATGCATGCGACATACA+TGG 0.563634 5_1:+59014868 None:intergenic
TCTAAAGACACCTTCGCCAA+TGG 0.564758 5_1:-59014508 Msa0740190:CDS
ACTTTCAACAACAGCAAACA+AGG 0.569695 5_1:-59012793 Msa0740190:CDS
CATCTTAAAACGGTGGACAA+TGG 0.573595 5_1:-59014199 Msa0740190:CDS
CGGAGAAGGAAGTGGATCGA+TGG 0.574177 5_1:-59015972 Msa0740190:CDS
CCGGGAGTTTGTGTGTAGCA+GGG 0.574471 5_1:-59015723 Msa0740190:CDS
ACGGTGTTAGGGAAGAGTTA+GGG 0.575963 5_1:+59016542 None:intergenic
ACCTGATTCTCCATTGGCGA+AGG 0.577117 5_1:+59014498 None:intergenic
GGTTGTTACAAAATTTGTGA+AGG 0.577403 5_1:-59015627 Msa0740190:CDS
TGAGGAAGGTGCTGTAGCTA+TGG 0.578207 5_1:-59014070 Msa0740190:CDS
GCCAACAGAATCGAAGAGGA+TGG 0.578654 5_1:-59014405 Msa0740190:CDS
AAACGTTATGTCTTGCGAGA+AGG 0.580603 5_1:-59014906 Msa0740190:CDS
GCTGTAATATCTCCTACTCA+AGG 0.581429 5_1:-59014672 Msa0740190:CDS
CCACAGTAACCCGAGAGAGA+TGG 0.582321 5_1:+59012853 None:intergenic
GAGGCTTCAAATCCTTGAGT+AGG 0.582780 5_1:+59014660 None:intergenic
ACGGTCAGTTTAATGCTGAT+GGG 0.585310 5_1:-59015757 Msa0740190:CDS
TGTTTAAATTTATTTAGCAT+AGG 0.585498 5_1:+59010498 None:intergenic
ATGACTGGTCTTAGAGAAGG+TGG 0.586437 5_1:-59014030 Msa0740190:CDS
CATCTTTGAAGTCAATGACG+TGG 0.586514 5_1:-59013198 Msa0740190:CDS
GGTCTTCTCCGACTCTGCAA+CGG 0.588638 5_1:-59016585 Msa0740190:five_prime_UTR
TGTATCTGATGTTGAAGTAG+GGG 0.588892 5_1:+59013912 None:intergenic
GGTTGCTGTAATAAATCTCA+AGG 0.589532 5_1:-59012772 Msa0740190:intron
TCGTACATGTATCATATCGT+AGG 0.593956 5_1:-59010776 Msa0740190:three_prime_UTR
ACCTTCCTCAGCATATCTGA+TGG 0.598127 5_1:+59014083 None:intergenic
AACTCGGGATCTCATGCTGA+GGG 0.600343 5_1:-59015905 Msa0740190:CDS
CATATGAGTCTTTGACATCA+CGG 0.600661 5_1:-59014128 Msa0740190:CDS
AGTTAAGTTTCAAGTATCCA+GGG 0.603293 5_1:-59011531 Msa0740190:CDS
TTGATCACGAGCACTATACA+AGG 0.604276 5_1:+59014728 None:intergenic
GCCATCAGATATGCTGAGGA+AGG 0.604325 5_1:-59014084 Msa0740190:CDS
GTGGACCATCAACTCGCTGA+CGG 0.606819 5_1:+59013671 None:intergenic
TGGATCGATGGAACATAATG+TGG 0.607966 5_1:-59015960 Msa0740190:CDS
GCAAAAGGGTCAAAATAAGT+GGG 0.609981 5_1:-59015648 Msa0740190:CDS
GGACTCTCAACTCGCTGACG+AGG 0.611590 5_1:+59013739 None:intergenic
TGATCGGTAGTTATAGAGAG+AGG 0.611883 5_1:+59014990 None:intergenic
TTGTATGCATCTGTCCTGAT+CGG 0.612352 5_1:+59014974 None:intergenic
TTCACTGGGATAAACCATCA+TGG 0.614596 5_1:-59015113 Msa0740190:CDS
TGAAATTGATTCAACACGTG+TGG 0.616172 5_1:-59016208 Msa0740190:five_prime_UTR
AGTAGCCGTTGTCAATCTCA+AGG 0.616717 5_1:-59013140 Msa0740190:intron
CATGTGATAACTATCGGAGA+AGG 0.618752 5_1:-59015986 Msa0740190:CDS
ATCTTTGAAGTCAATGACGT+GGG 0.619370 5_1:-59013197 Msa0740190:CDS
TCATACTGCCTAAAGAACAT+TGG 0.619859 5_1:+59014600 None:intergenic
TAGACAAATATGAACTCAGA+GGG 0.622079 5_1:-59014767 Msa0740190:CDS
TAACCTGACAGAAACAATTG+AGG 0.623748 5_1:-59014817 Msa0740190:CDS
GAAGTCTATGACTGAAGTCG+GGG 0.631820 5_1:-59012820 Msa0740190:CDS
GGACCATCATCTCGCTGACG+AGG 0.632084 5_1:+59013607 None:intergenic
ATGATTAGGATAGAGCAAAA+GGG 0.632703 5_1:-59015662 Msa0740190:CDS
GGACTATCAACTCGCTGACG+AGG 0.634516 5_1:+59013706 None:intergenic
GGATATACATGGTGGCACGT+TGG 0.635926 5_1:-59016109 Msa0740190:five_prime_UTR
TACCGCCAACAGAATCGAAG+AGG 0.639324 5_1:-59014409 Msa0740190:CDS
CACATTATAAGGCATCGAAG+TGG 0.639643 5_1:+59015376 None:intergenic
TTTATGCAGTGACGTGCTTG+GGG 0.640502 5_1:+59014930 None:intergenic
TCTGGCGGTACCTGATAAGG+TGG 0.640782 5_1:-59015591 Msa0740190:CDS
ATCTCGCTGACGAGGCATTG+GGG 0.645015 5_1:+59013615 None:intergenic
TGATGGTCCACCTGAAAACA+CGG 0.645985 5_1:-59013560 Msa0740190:intron
TAGTTATAGAGAGAGGGTGA+CGG 0.646341 5_1:+59014997 None:intergenic
ACATTGGTAATGTTGTATGC+CGG 0.647842 5_1:+59014616 None:intergenic
GCAATGACTGGTCTTAGAGA+AGG 0.648703 5_1:-59014033 Msa0740190:CDS
GTCCACGACCAGTGCCTCGT+AGG 0.650635 5_1:-59013654 Msa0740190:CDS
AAAGTGCAGGCTGAAAACCC+TGG 0.650722 5_1:-59015290 Msa0740190:CDS
CTTCGATGCCTTATAATGTG+AGG 0.651484 5_1:-59015373 Msa0740190:CDS
TTTATAGTGAGTATGCTAGA+CGG 0.652904 5_1:-59015808 Msa0740190:CDS
GATCGGTAGTTATAGAGAGA+GGG 0.656771 5_1:+59014991 None:intergenic
AACTCGCTGACGAGGCATTG+GGG 0.657743 5_1:+59013714 None:intergenic
GGAAGCCATCAGATATGCTG+AGG 0.662402 5_1:-59014088 Msa0740190:CDS
GTGTGGAGAGTAGAAAAGAG+TGG 0.662993 5_1:-59016191 Msa0740190:five_prime_UTR
GTATTGCATAGAAGAAACCA+GGG 0.664100 5_1:+59015273 None:intergenic
AAACTCGGGATCTCATGCTG+AGG 0.664329 5_1:-59015906 Msa0740190:CDS
TACATACTGACATAACCACC+CGG 0.669695 5_1:+59010909 None:intergenic
ACCATGCCTGAAACTTACAA+AGG 0.669726 5_1:-59015527 Msa0740190:CDS
CCCACTACATCTTAAAACGG+TGG 0.672135 5_1:-59014206 Msa0740190:CDS
TGGGTTTAAGAACATGTCCA+GGG 0.677708 5_1:-59010673 Msa0740190:three_prime_UTR
AACTTGCTTACGTGCCACTG+GGG 0.680413 5_1:+59013780 None:intergenic
GGAACATAGCCATTCTCTGG+CGG 0.681713 5_1:-59015606 Msa0740190:CDS
AAGGATGACTGAAAGTTGCG+AGG 0.682372 5_1:-59015687 Msa0740190:CDS
ATTGATTGTTTGGAGCTGCA+GGG 0.684593 5_1:+59010711 None:intergenic
ATAGACAAATATGAACTCAG+AGG 0.685380 5_1:-59014768 Msa0740190:CDS
AACTCGCTGACGGGACACTG+GGG 0.687605 5_1:+59013681 None:intergenic
AGTATTGTATTGGACGAATG+TGG 0.693732 5_1:-59014165 Msa0740190:CDS
GGACCATCAACTCGCCTACG+AGG 0.699625 5_1:+59013640 None:intergenic
GTAGGTGTGTGAACAATGCG+GGG 0.700461 5_1:+59016511 None:intergenic
CAGCACAAGAAAGTTGCTCG+CGG 0.708596 5_1:+59011471 None:intergenic
TTGTAGGTGTGTGAACAATG+CGG 0.708846 5_1:+59016509 None:intergenic
AACTCGCTGACGAGGCACTG+GGG 0.710997 5_1:+59013747 None:intergenic
ACATACCTTGAGATTGACAA+CGG 0.720523 5_1:+59013135 None:intergenic
AGTTTCATTTAATAGCCGGG+TGG 0.723218 5_1:-59010924 Msa0740190:three_prime_UTR
ATTGTATTGGACGAATGTGG+TGG 0.729466 5_1:-59014162 Msa0740190:CDS
CTGAAACTTACAAAGGACTG+GGG 0.731403 5_1:-59015520 Msa0740190:CDS
TATAGTGAATACATTAGACA+CGG 0.741062 5_1:+59014233 None:intergenic
TTTACCACAAACGACCCCAG+TGG 0.755041 5_1:-59013794 Msa0740190:CDS
TAGGTGTGTGAACAATGCGG+GGG 0.781624 5_1:+59016512 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATAATTTAAAATCAGTTT+TGG - chr5_1:59014049-59014068 Msa0740190:CDS 10.0%
!!! AAAGAATTAACATTTTAATT+TGG - chr5_1:59014853-59014872 Msa0740190:CDS 10.0%
!! ATTCAATAAAAAACAGTAAA+TGG + chr5_1:59010718-59010737 None:intergenic 15.0%
!! AATGTTATGTATTCAAATTT+GGG + chr5_1:59013862-59013881 None:intergenic 15.0%
!! TAATGTTATGTATTCAAATT+TGG + chr5_1:59013863-59013882 None:intergenic 15.0%
!! TATATTTAAAAGAAAGAATC+TGG - chr5_1:59014529-59014548 Msa0740190:CDS 15.0%
!! TAAGATGAATATATTTATAC+CGG - chr5_1:59014651-59014670 Msa0740190:CDS 15.0%
!! TATTTATCTATCATTTAATG+TGG - chr5_1:59015188-59015207 Msa0740190:CDS 15.0%
!! ATTTATCTATCATTTAATGT+GGG - chr5_1:59015189-59015208 Msa0740190:CDS 15.0%
!!! TGGTATTGTTATTATTATTA+TGG - chr5_1:59015422-59015441 Msa0740190:CDS 15.0%
!!! GGTATTGTTATTATTATTAT+GGG - chr5_1:59015423-59015442 Msa0740190:CDS 15.0%
!!! GTTATGAAAATTACTTTTTC+TGG - chr5_1:59010837-59010856 Msa0740190:three_prime_UTR 20.0%
!!! TTTTTCTGCATTTCATTATT+AGG - chr5_1:59010876-59010895 Msa0740190:three_prime_UTR 20.0%
!!! TTCATTATTAGGAATTTTCA+AGG - chr5_1:59010887-59010906 Msa0740190:three_prime_UTR 20.0%
!!! TGCTTTTTTATATATGTTCT+TGG - chr5_1:59013605-59013624 Msa0740190:CDS 20.0%
!!! GCTTTTTTATATATGTTCTT+GGG - chr5_1:59013606-59013625 Msa0740190:CDS 20.0%
!! ATGTTATGTATTCAAATTTG+GGG + chr5_1:59013861-59013880 None:intergenic 20.0%
!! ATTCTATTTGCAACAAAATA+TGG + chr5_1:59014882-59014901 None:intergenic 20.0%
!! TTTATCTATCATTTAATGTG+GGG - chr5_1:59015190-59015209 Msa0740190:CDS 20.0%
!!! TCTATTTGGTTATTTTATCA+AGG - chr5_1:59015214-59015233 Msa0740190:CDS 20.0%
!! TATTCTTTACTACTTCTATT+TGG + chr5_1:59015380-59015399 None:intergenic 20.0%
!! TAGAAGTAGTAAAGAATAAA+AGG - chr5_1:59015382-59015401 Msa0740190:CDS 20.0%
!! AGGAAATGTAAAGAAAATAA+TGG - chr5_1:59015402-59015421 Msa0740190:CDS 20.0%
!! TATTATTATGGGAGAAATAA+TGG - chr5_1:59015434-59015453 Msa0740190:CDS 20.0%
!!! TTAAACTAAGTTGAATTGTA+GGG + chr5_1:59016045-59016064 None:intergenic 20.0%
!!! ATTAAACTAAGTTGAATTGT+AGG + chr5_1:59016046-59016065 None:intergenic 20.0%
!! TACTAATTACTCACAAAAAA+TGG - chr5_1:59016548-59016567 Msa0740190:five_prime_UTR 20.0%
!! ACTAATTACTCACAAAAAAT+GGG - chr5_1:59016549-59016568 Msa0740190:five_prime_UTR 20.0%
! TTTCATAATCTTCTGATTGT+AGG + chr5_1:59010628-59010647 None:intergenic 25.0%
!! AATTTTCATTACTGTAAGTC+AGG - chr5_1:59010650-59010669 Msa0740190:three_prime_UTR 25.0%
!! ATTTTCATTACTGTAAGTCA+GGG - chr5_1:59010651-59010670 Msa0740190:three_prime_UTR 25.0%
! TAGAAATTGAAATGGGAAAT+TGG + chr5_1:59010680-59010699 None:intergenic 25.0%
! TTGAGTGTAGAAATTGAAAT+GGG + chr5_1:59010687-59010706 None:intergenic 25.0%
! ATTGAGTGTAGAAATTGAAA+TGG + chr5_1:59010688-59010707 None:intergenic 25.0%
!! TATTTTGTCCTTTTGTGAAA+TGG - chr5_1:59010747-59010766 Msa0740190:three_prime_UTR 25.0%
!! ATTTTGTCCTTTTGTGAAAT+GGG - chr5_1:59010748-59010767 Msa0740190:three_prime_UTR 25.0%
!!! TGGATTTTTTGTTGTAGTTT+TGG - chr5_1:59010947-59010966 Msa0740190:exon 25.0%
!!! GGATTTTTTGTTGTAGTTTT+GGG - chr5_1:59010948-59010967 Msa0740190:exon 25.0%
!! TGTGATAATTTTCACAATCT+GGG - chr5_1:59010974-59010993 Msa0740190:CDS 25.0%
!! CATGCAATTTTCTATTTGAT+TGG - chr5_1:59011046-59011065 Msa0740190:intron 25.0%
!! AGTTGTTTCATTGTTTGTAA+TGG - chr5_1:59011104-59011123 Msa0740190:intron 25.0%
!! CCTAATGTCTTCTTTTTAAT+GGG + chr5_1:59011774-59011793 None:intergenic 25.0%
! CCATTAAAAAGAAGACATTA+GGG - chr5_1:59011772-59011791 Msa0740190:intron 25.0%
! TAGAGTTCATAGTGAAAATA+AGG + chr5_1:59012272-59012291 None:intergenic 25.0%
! TATAGTGAATACATTAGACA+CGG + chr5_1:59012888-59012907 None:intergenic 25.0%
! AGCAAAAAACAGTATTGTAT+TGG - chr5_1:59012943-59012962 Msa0740190:intron 25.0%
! TTTATATATGTTCTTGGGAT+TGG - chr5_1:59013611-59013630 Msa0740190:CDS 25.0%
! AAGTACACTAACACTAAAAA+AGG + chr5_1:59014123-59014142 None:intergenic 25.0%
!!! ATTTTAACAAAGTAACAGTG+AGG - chr5_1:59014163-59014182 Msa0740190:CDS 25.0%
! TTCAACACATTATTAATAGC+CGG + chr5_1:59014673-59014692 None:intergenic 25.0%
! CTTATATTATAAGTTCAGGT+TGG + chr5_1:59014781-59014800 None:intergenic 25.0%
! GTTGCTTATATTATAAGTTC+AGG + chr5_1:59014785-59014804 None:intergenic 25.0%
! ATAATATAAGCAACACACAA+AGG - chr5_1:59014791-59014810 Msa0740190:CDS 25.0%
! TGTTGCAAATAGAATATTTG+TGG - chr5_1:59014887-59014906 Msa0740190:CDS 25.0%
! ATAACCAAACAAGAGAAAAT+GGG + chr5_1:59015051-59015070 None:intergenic 25.0%
! ACTTGAGATAAAATTGAATG+TGG + chr5_1:59015115-59015134 None:intergenic 25.0%
!!! TTCAATTTTATCTCAAGTTG+AGG - chr5_1:59015117-59015136 Msa0740190:CDS 25.0%
! TTATCTATCATTTAATGTGG+GGG - chr5_1:59015191-59015210 Msa0740190:CDS 25.0%
!! AATTTTCTCCTTTGCTTATT+TGG + chr5_1:59015291-59015310 None:intergenic 25.0%
!!! AGTTTTGTCTGTTGTTTATA+TGG + chr5_1:59015338-59015357 None:intergenic 25.0%
! GATACACATATTTAGGTAAT+AGG + chr5_1:59015680-59015699 None:intergenic 25.0%
! ATTAATATACACAGAGAAAG+AGG + chr5_1:59016094-59016113 None:intergenic 25.0%
! TCTAAGTTTCATTTAATAGC+CGG - chr5_1:59016190-59016209 Msa0740190:five_prime_UTR 25.0%
!! ACAAATTTTTGTAGAGAAAG+AGG + chr5_1:59016310-59016329 None:intergenic 25.0%
! ACTCATTGTAATTGATTGTT+TGG + chr5_1:59016420-59016439 None:intergenic 25.0%
! TCAATTACAATGAGTAGAAA+TGG - chr5_1:59016425-59016444 Msa0740190:intron 25.0%
! CAATTACAATGAGTAGAAAT+GGG - chr5_1:59016426-59016445 Msa0740190:intron 25.0%
! GTGAGTAATTAGTATTCATA+CGG + chr5_1:59016542-59016561 None:intergenic 25.0%
ATCAAAACCCATTTCACAAA+AGG + chr5_1:59010758-59010777 None:intergenic 30.0%
! GTGTGATAATTTTCACAATC+TGG - chr5_1:59010973-59010992 Msa0740190:CDS 30.0%
! TGCTTGATTTTGGATATACA+TGG - chr5_1:59010998-59011017 Msa0740190:intron 30.0%
! TTGATTTTGGATATACATGG+TGG - chr5_1:59011001-59011020 Msa0740190:intron 30.0%
GATGTTCATGTGATAACTAT+CGG - chr5_1:59011126-59011145 Msa0740190:intron 30.0%
TTTATAGTGAGTATGCTAGA+CGG - chr5_1:59011310-59011329 Msa0740190:intron 30.0%
ATGATTAGGATAGAGCAAAA+GGG - chr5_1:59011456-59011475 Msa0740190:intron 30.0%
GGTTGTTACAAAATTTGTGA+AGG - chr5_1:59011491-59011510 Msa0740190:CDS 30.0%
!! AATCTTTTGACTATTGTCAG+AGG + chr5_1:59011673-59011692 None:intergenic 30.0%
CTGACAATAGTCAAAAGATT+AGG - chr5_1:59011673-59011692 Msa0740190:intron 30.0%
! ATCGAAGTGGAATTTTTAAC+TGG + chr5_1:59011732-59011751 None:intergenic 30.0%
CCCATTAAAAAGAAGACATT+AGG - chr5_1:59011771-59011790 Msa0740190:intron 30.0%
! CCCTAATGTCTTCTTTTTAA+TGG + chr5_1:59011775-59011794 None:intergenic 30.0%
TTAAAAAGAAGACATTAGGG+AGG - chr5_1:59011775-59011794 Msa0740190:intron 30.0%
TAAAAAGAAGACATTAGGGA+GGG - chr5_1:59011776-59011795 Msa0740190:intron 30.0%
! ATCGTATGTCTAATGTGTTT+TGG - chr5_1:59011883-59011902 Msa0740190:intron 30.0%
! TCGTATGTCTAATGTGTTTT+GGG - chr5_1:59011884-59011903 Msa0740190:intron 30.0%
ACAAAATCATTTGACCATGA+TGG + chr5_1:59012022-59012041 None:intergenic 30.0%
! CATGGTCAAATGATTTTGTT+TGG - chr5_1:59012023-59012042 Msa0740190:intron 30.0%
! ACTCATATTTGATGATTCTG+AGG - chr5_1:59012052-59012071 Msa0740190:intron 30.0%
!! TTGAGGAGTTTGATTTTTCT+TGG - chr5_1:59012318-59012337 Msa0740190:intron 30.0%
ATAGACAAATATGAACTCAG+AGG - chr5_1:59012350-59012369 Msa0740190:intron 30.0%
TAGACAAATATGAACTCAGA+GGG - chr5_1:59012351-59012370 Msa0740190:intron 30.0%
TTACAGCGAAAAATGAATCA+CGG + chr5_1:59012433-59012452 None:intergenic 30.0%
CAACATTACCAATGTTCTTT+AGG - chr5_1:59012510-59012529 Msa0740190:intron 30.0%
!! ATGATTAGTTGATGACACTT+TGG + chr5_1:59013146-59013165 None:intergenic 30.0%
TTGTATCTGATGTTGAAGTA+GGG + chr5_1:59013210-59013229 None:intergenic 30.0%
TGGAATAGAATGCATAATGT+TGG - chr5_1:59013631-59013650 Msa0740190:CDS 30.0%
CTTGAGAAGAGTTTATAAAG+AGG - chr5_1:59013790-59013809 Msa0740190:CDS 30.0%
CAATCTCAACATCAAAAAAC+TGG - chr5_1:59014012-59014031 Msa0740190:CDS 30.0%
TTAACCTCATATTCTGTTGA+TGG + chr5_1:59014242-59014261 None:intergenic 30.0%
TCATTATTCTCTAATATGCC+CGG - chr5_1:59014391-59014410 Msa0740190:CDS 30.0%
! AACAGAACATAACTAGTCTA+TGG - chr5_1:59014598-59014617 Msa0740190:CDS 30.0%
AATGTGGACTTGTAATATCA+GGG - chr5_1:59014705-59014724 Msa0740190:CDS 30.0%
TGACTTCAATATCTTGCAAT+TGG - chr5_1:59014749-59014768 Msa0740190:CDS 30.0%
TGTAAGACCTAATAATTGCT+AGG - chr5_1:59014978-59014997 Msa0740190:CDS 30.0%
ATACAGACCTAGCAATTATT+AGG + chr5_1:59014988-59015007 None:intergenic 30.0%
CATAACCAAACAAGAGAAAA+TGG + chr5_1:59015052-59015071 None:intergenic 30.0%
!! CATTTTCTCTTGTTTGGTTA+TGG - chr5_1:59015050-59015069 Msa0740190:CDS 30.0%
TCTTTACTACTTCTATTTGG+AGG + chr5_1:59015377-59015396 None:intergenic 30.0%
! AAGTTAAGTTTCAAGTATCC+AGG - chr5_1:59015586-59015605 Msa0740190:CDS 30.0%
! AGTTAAGTTTCAAGTATCCA+GGG - chr5_1:59015587-59015606 Msa0740190:CDS 30.0%
GATGGATGATACACATATTT+AGG + chr5_1:59015687-59015706 None:intergenic 30.0%
!! AATTGATTTGTATGCGATGA+TGG + chr5_1:59015705-59015724 None:intergenic 30.0%
!!! AGTTTTTTTTTTCCTTGCCA+TGG - chr5_1:59015849-59015868 Msa0740190:CDS 30.0%
!! TCTAGCCTAGATTTTAACAT+GGG + chr5_1:59015936-59015955 None:intergenic 30.0%
CTAAGTTTCATTTAATAGCC+GGG - chr5_1:59016191-59016210 Msa0740190:five_prime_UTR 30.0%
! GTCAGTATGTATCATTTTGA+TGG - chr5_1:59016221-59016240 Msa0740190:five_prime_UTR 30.0%
TTGTTTGATAGGAAAGGATT+TGG - chr5_1:59016373-59016392 Msa0740190:intron 30.0%
! TGAAATTGATTCAACACGTG+TGG - chr5_1:59010910-59010929 Msa0740190:three_prime_UTR 35.0%
CATAATGTGGATGCTGAATT+TGG - chr5_1:59011171-59011190 Msa0740190:intron 35.0%
TTTGGTCAAGTTAATGATGC+TGG - chr5_1:59011189-59011208 Msa0740190:intron 35.0%
AGTTAATGATGCTGGAAACT+CGG - chr5_1:59011197-59011216 Msa0740190:intron 35.0%
AAATACGGCTCCGAAAAATA+TGG + chr5_1:59011252-59011271 None:intergenic 35.0%
!! ATATTTTTCGGAGCCGTATT+TGG - chr5_1:59011251-59011270 Msa0740190:intron 35.0%
!! TATTTTTCGGAGCCGTATTT+GGG - chr5_1:59011252-59011271 Msa0740190:intron 35.0%
TCAAATACCATGCCCAAATA+CGG + chr5_1:59011267-59011286 None:intergenic 35.0%
GATGATTAGGATAGAGCAAA+AGG - chr5_1:59011455-59011474 Msa0740190:intron 35.0%
AGCAAAAGGGTCAAAATAAG+TGG - chr5_1:59011469-59011488 Msa0740190:intron 35.0%
GCAAAAGGGTCAAAATAAGT+GGG - chr5_1:59011470-59011489 Msa0740190:intron 35.0%
! TGAAGTTTTTCCACCTTATC+AGG + chr5_1:59011540-59011559 None:intergenic 35.0%
GATATATACATGACACCAGT+TGG + chr5_1:59011630-59011649 None:intergenic 35.0%
CTTTCATAAAATACTCCAGC+AGG + chr5_1:59011812-59011831 None:intergenic 35.0%
!! GGAGTATTTTATGAAAGTGC+AGG - chr5_1:59011815-59011834 Msa0740190:intron 35.0%
GTATTGCATAGAAGAAACCA+GGG + chr5_1:59011848-59011867 None:intergenic 35.0%
TGTATTGCATAGAAGAAACC+AGG + chr5_1:59011849-59011868 None:intergenic 35.0%
TAACCTGACAGAAACAATTG+AGG - chr5_1:59012301-59012320 Msa0740190:intron 35.0%
AATGAATCACGGAAATATGC+TGG + chr5_1:59012422-59012441 None:intergenic 35.0%
!!! AGGATTTGAAGCCTCTTTTT+TGG - chr5_1:59012466-59012485 Msa0740190:intron 35.0%
!!! TTTGAAGCCTCTTTTTTGGA+CGG - chr5_1:59012470-59012489 Msa0740190:intron 35.0%
!! ACATTGGTAATGTTGTATGC+CGG + chr5_1:59012505-59012524 None:intergenic 35.0%
TCATACTGCCTAAAGAACAT+TGG + chr5_1:59012521-59012540 None:intergenic 35.0%
TCTGGAGAAATGGTTTGAAA+AGG - chr5_1:59012547-59012566 Msa0740190:intron 35.0%
!! TGCCAAATGTTTGAGTTTTC+AGG - chr5_1:59012830-59012849 Msa0740190:CDS 35.0%
TGCCTGAAAACTCAAACATT+TGG + chr5_1:59012835-59012854 None:intergenic 35.0%
!! AGTTTTCAGGCATTCTTTGT+AGG - chr5_1:59012843-59012862 Msa0740190:CDS 35.0%
CATCCCACTACATCTTAAAA+CGG - chr5_1:59012909-59012928 Msa0740190:intron 35.0%
AGTATTGTATTGGACGAATG+TGG - chr5_1:59012953-59012972 Msa0740190:intron 35.0%
CATATGAGTCTTTGACATCA+CGG - chr5_1:59012990-59013009 Msa0740190:intron 35.0%
TGTATCTGATGTTGAAGTAG+GGG + chr5_1:59013209-59013228 None:intergenic 35.0%
CTTGTATCTGATGTTGAAGT+AGG + chr5_1:59013211-59013230 None:intergenic 35.0%
! CAAGTACAATCCCTCTTTTA+TGG - chr5_1:59013227-59013246 Msa0740190:intron 35.0%
CAAACCAAAGGTTGCAATTT+AGG + chr5_1:59013691-59013710 None:intergenic 35.0%
! TTCCAACACCTTCATTTTGT+TGG - chr5_1:59013724-59013743 Msa0740190:CDS 35.0%
!!! CTTCATTTTGTTGGCTTTGA+GGG - chr5_1:59013733-59013752 Msa0740190:CDS 35.0%
!!! TTCATTTTGTTGGCTTTGAG+GGG - chr5_1:59013734-59013753 Msa0740190:CDS 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - chr5_1:59013793-59013812 Msa0740190:CDS 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr5_1:59013837-59013856 None:intergenic 35.0%
CACCTACATGACAGAATAAA+CGG + chr5_1:59013893-59013912 None:intergenic 35.0%
!! ATCTTTGAAGTCAATGACGT+GGG - chr5_1:59013921-59013940 Msa0740190:CDS 35.0%
ACATACCTTGAGATTGACAA+CGG + chr5_1:59013986-59014005 None:intergenic 35.0%
CAACATCAAAAAACTGGTAG+TGG - chr5_1:59014018-59014037 Msa0740190:CDS 35.0%
CTAACACTAAAAAAGGACCA+TGG + chr5_1:59014116-59014135 None:intergenic 35.0%
CTTTGTTAAAATGATGCGAC+AGG + chr5_1:59014155-59014174 None:intergenic 35.0%
TCAGTCATAGACTTCAAAAC+AGG + chr5_1:59014293-59014312 None:intergenic 35.0%
TTGAAGTCTATGACTGAAGT+CGG - chr5_1:59014296-59014315 Msa0740190:CDS 35.0%
ACTTTCAACAACAGCAAACA+AGG - chr5_1:59014325-59014344 Msa0740190:CDS 35.0%
GGTTGCTGTAATAAATCTCA+AGG - chr5_1:59014346-59014365 Msa0740190:CDS 35.0%
TTGCTCTGTTATTCTAGTAC+TGG - chr5_1:59014427-59014446 Msa0740190:CDS 35.0%
ATGCAATTGTCTTCGTACTA+AGG - chr5_1:59014468-59014487 Msa0740190:CDS 35.0%
TGCAATTGTCTTCGTACTAA+GGG - chr5_1:59014469-59014488 Msa0740190:CDS 35.0%
TAAGGGGATGTAAAGCAAAA+AGG - chr5_1:59014486-59014505 Msa0740190:CDS 35.0%
AAGGGGATGTAAAGCAAAAA+GGG - chr5_1:59014487-59014506 Msa0740190:CDS 35.0%
! TAACTAGTCTATGGTCTTTG+AGG - chr5_1:59014607-59014626 Msa0740190:CDS 35.0%
GAATGTGGACTTGTAATATC+AGG - chr5_1:59014704-59014723 Msa0740190:CDS 35.0%
! TATCGATGTCTAAGATGCTT+TGG - chr5_1:59014928-59014947 Msa0740190:CDS 35.0%
!! TAGAAGGAACTAAGTTGATG+TGG - chr5_1:59015086-59015105 Msa0740190:CDS 35.0%
!! AGAAGGAACTAAGTTGATGT+GGG - chr5_1:59015087-59015106 Msa0740190:CDS 35.0%
ATTTAATGTGGGGGTCTATT+TGG - chr5_1:59015200-59015219 Msa0740190:CDS 35.0%
TTCTCCTTTGCTTATTTGGT+CGG + chr5_1:59015287-59015306 None:intergenic 35.0%
TGGCTTTCTTGTAACATAGT+TGG + chr5_1:59015744-59015763 None:intergenic 35.0%
!! CTCTAGCCTAGATTTTAACA+TGG + chr5_1:59015937-59015956 None:intergenic 35.0%
! TTTGCATGCAAAATTTTCGC+AGG - chr5_1:59016119-59016138 Msa0740190:five_prime_UTR 35.0%
! TTGCATGCAAAATTTTCGCA+GGG - chr5_1:59016120-59016139 Msa0740190:five_prime_UTR 35.0%
TCGTACATGTATCATATCGT+AGG - chr5_1:59016342-59016361 Msa0740190:intron 35.0%
! GAAGACTTGTTTGATAGGAA+AGG - chr5_1:59016367-59016386 Msa0740190:intron 35.0%
! TATACTTTCTTTTCTCTCCC+TGG + chr5_1:59016465-59016484 None:intergenic 35.0%
AGAGTCACTATATCCAAGTT+TGG - chr5_1:59016507-59016526 Msa0740190:five_prime_UTR 35.0%
AACACTCTCTCTCTTTCTCT+CGG - chr5_1:59010512-59010531 Msa0740190:three_prime_UTR 40.0%
! TTAGGGAAGAGTTAGGGTTT+TGG + chr5_1:59010573-59010592 None:intergenic 40.0%
TTGTAGGTGTGTGAACAATG+CGG + chr5_1:59010612-59010631 None:intergenic 40.0%
! CAATCTGGGTTGCTTGATTT+TGG - chr5_1:59010988-59011007 Msa0740190:intron 40.0%
CATGTGATAACTATCGGAGA+AGG - chr5_1:59011132-59011151 Msa0740190:intron 40.0%
ATAACTATCGGAGAAGGAAG+TGG - chr5_1:59011138-59011157 Msa0740190:intron 40.0%
TGGATCGATGGAACATAATG+TGG - chr5_1:59011158-59011177 Msa0740190:intron 40.0%
GTTAATGATGCTGGAAACTC+GGG - chr5_1:59011198-59011217 Msa0740190:intron 40.0%
! GGTTTCGGAGCCATATTTTT+CGG - chr5_1:59011239-59011258 Msa0740190:intron 40.0%
ACGGTCAGTTTAATGCTGAT+GGG - chr5_1:59011361-59011380 Msa0740190:intron 40.0%
CTGATGGGACAAATATGTTC+CGG - chr5_1:59011376-59011395 Msa0740190:intron 40.0%
TGATGGGACAAATATGTTCC+GGG - chr5_1:59011377-59011396 Msa0740190:intron 40.0%
!! ACACTAGAAAAGTGCTTCAC+TGG + chr5_1:59011564-59011583 None:intergenic 40.0%
!! GTGAAGCACTTTTCTAGTGT+TGG - chr5_1:59011564-59011583 Msa0740190:CDS 40.0%
ACCATGCCTGAAACTTACAA+AGG - chr5_1:59011591-59011610 Msa0740190:intron 40.0%
TCCTTTGTAAGTTTCAGGCA+TGG + chr5_1:59011595-59011614 None:intergenic 40.0%
CCTGAAACTTACAAAGGACT+GGG - chr5_1:59011597-59011616 Msa0740190:intron 40.0%
CTGAAACTTACAAAGGACTG+GGG - chr5_1:59011598-59011617 Msa0740190:intron 40.0%
!! AACTGGATGACTCGTTTTTG+CGG + chr5_1:59011715-59011734 None:intergenic 40.0%
!! CACATTATAAGGCATCGAAG+TGG + chr5_1:59011745-59011764 None:intergenic 40.0%
CTTCGATGCCTTATAATGTG+AGG - chr5_1:59011745-59011764 Msa0740190:intron 40.0%
! ATGGGTTGCCTCACATTATA+AGG + chr5_1:59011756-59011775 None:intergenic 40.0%
! AGGACAGCTTACAGTCATTT+TGG - chr5_1:59011921-59011940 Msa0740190:intron 40.0%
TGATGGTTTATCCCAGTGAA+TGG + chr5_1:59012005-59012024 None:intergenic 40.0%
TTCACTGGGATAAACCATCA+TGG - chr5_1:59012005-59012024 Msa0740190:intron 40.0%
!!! GATGATTCTGAGGCTTCTTT+TGG - chr5_1:59012062-59012081 Msa0740190:intron 40.0%
!!! ATTCTGAGGCTTCTTTTGGT+TGG - chr5_1:59012066-59012085 Msa0740190:intron 40.0%
TAGTTATAGAGAGAGGGTGA+CGG + chr5_1:59012124-59012143 None:intergenic 40.0%
GATCGGTAGTTATAGAGAGA+GGG + chr5_1:59012130-59012149 None:intergenic 40.0%
TGATCGGTAGTTATAGAGAG+AGG + chr5_1:59012131-59012150 None:intergenic 40.0%
TCTCTCTATAACTACCGATC+AGG - chr5_1:59012130-59012149 Msa0740190:intron 40.0%
TTGTATGCATCTGTCCTGAT+CGG + chr5_1:59012147-59012166 None:intergenic 40.0%
AAACGTTATGTCTTGCGAGA+AGG - chr5_1:59012212-59012231 Msa0740190:intron 40.0%
! ATACATGGCCCAATTTTTCG+TGG + chr5_1:59012238-59012257 None:intergenic 40.0%
!! ACTCCTCAATTGTTTCTGTC+AGG + chr5_1:59012307-59012326 None:intergenic 40.0%
TTGATCACGAGCACTATACA+AGG + chr5_1:59012393-59012412 None:intergenic 40.0%
TGTATAGTGCTCGTGATCAA+TGG - chr5_1:59012393-59012412 Msa0740190:intron 40.0%
GTATAGTGCTCGTGATCAAT+GGG - chr5_1:59012394-59012413 Msa0740190:intron 40.0%
GCTGTAATATCTCCTACTCA+AGG - chr5_1:59012446-59012465 Msa0740190:intron 40.0%
!! ATGAACTAGCTCTGGAGAAA+TGG - chr5_1:59012537-59012556 Msa0740190:intron 40.0%
TTAGCAACCTGATTCTCCAT+TGG + chr5_1:59012629-59012648 None:intergenic 40.0%
GATGGGGTGAATAGCATATT+TGG - chr5_1:59012731-59012750 Msa0740190:intron 40.0%
! AGTTAGCTCTCAATTCAGAC+TGG + chr5_1:59012805-59012824 None:intergenic 40.0%
!!! CGTTTTAAGATGTAGTGGGA+TGG + chr5_1:59012911-59012930 None:intergenic 40.0%
!!! CCACCGTTTTAAGATGTAGT+GGG + chr5_1:59012915-59012934 None:intergenic 40.0%
!!! TCCACCGTTTTAAGATGTAG+TGG + chr5_1:59012916-59012935 None:intergenic 40.0%
CATCTTAAAACGGTGGACAA+TGG - chr5_1:59012919-59012938 Msa0740190:intron 40.0%
ATTGTATTGGACGAATGTGG+TGG - chr5_1:59012956-59012975 Msa0740190:intron 40.0%
ACTTATGATGCTGCAATGAC+TGG - chr5_1:59013073-59013092 Msa0740190:intron 40.0%
CGTTAAGTGGCCATAAAAGA+GGG + chr5_1:59013240-59013259 None:intergenic 40.0%
TCGTTAAGTGGCCATAAAAG+AGG + chr5_1:59013241-59013260 None:intergenic 40.0%
GTCGATGTTTCATCGTTAAG+TGG + chr5_1:59013253-59013272 None:intergenic 40.0%
GGTAAATTCAGATCAGCCAT+TGG + chr5_1:59013310-59013329 None:intergenic 40.0%
TGGAAATTCCGCCTTTATTG+CGG - chr5_1:59013651-59013670 Msa0740190:CDS 40.0%
! AGCCAACAAAATGAAGGTGT+TGG + chr5_1:59013729-59013748 None:intergenic 40.0%
CCTCAAAGCCAACAAAATGA+AGG + chr5_1:59013735-59013754 None:intergenic 40.0%
!!! CCTTCATTTTGTTGGCTTTG+AGG - chr5_1:59013732-59013751 Msa0740190:CDS 40.0%
!!! TCATTTTGTTGGCTTTGAGG+GGG - chr5_1:59013735-59013754 Msa0740190:CDS 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr5_1:59013835-59013854 Msa0740190:CDS 40.0%
ACATGACAGAATAAACGGAC+TGG + chr5_1:59013888-59013907 None:intergenic 40.0%
GTCCGTTTATTCTGTCATGT+AGG - chr5_1:59013888-59013907 Msa0740190:CDS 40.0%
CGTTTATTCTGTCATGTAGG+TGG - chr5_1:59013891-59013910 Msa0740190:CDS 40.0%
!! CACGTCATTGACTTCAAAGA+TGG + chr5_1:59013922-59013941 None:intergenic 40.0%
!! CATCTTTGAAGTCAATGACG+TGG - chr5_1:59013920-59013939 Msa0740190:CDS 40.0%
TACTCTGTTCTCTGGATTTG+AGG + chr5_1:59013962-59013981 None:intergenic 40.0%
GAGTTTCTCAAGTGAAACAC+AGG + chr5_1:59014078-59014097 None:intergenic 40.0%
GAGTCCATCAACAGAATATG+AGG - chr5_1:59014235-59014254 Msa0740190:CDS 40.0%
AGGTTAAGTTCCATCTCTCT+CGG - chr5_1:59014255-59014274 Msa0740190:CDS 40.0%
TGAAGTCTATGACTGAAGTC+GGG - chr5_1:59014297-59014316 Msa0740190:CDS 40.0%
AGCAACAAAGCATATGAACC+GGG + chr5_1:59014412-59014431 None:intergenic 40.0%
GAGCAACAAAGCATATGAAC+CGG + chr5_1:59014413-59014432 None:intergenic 40.0%
GCAATTGTCTTCGTACTAAG+GGG - chr5_1:59014470-59014489 Msa0740190:CDS 40.0%
GGACTTGTAATATCAGGGAA+AGG - chr5_1:59014710-59014729 Msa0740190:CDS 40.0%
!! TCAGGGAAAGGCATTAAACT+TGG - chr5_1:59014722-59014741 Msa0740190:CDS 40.0%
CTTTCAGTCTTGAGATGCAA+AGG + chr5_1:59014837-59014856 None:intergenic 40.0%
! TGTCTAAGATGCTTTGGTTG+CGG - chr5_1:59014934-59014953 Msa0740190:CDS 40.0%
ACAAGAGAAAATGGGAGACA+TGG + chr5_1:59015043-59015062 None:intergenic 40.0%
! GTCTCCCATTTTCTCTTGTT+TGG - chr5_1:59015044-59015063 Msa0740190:CDS 40.0%
TGGAGAGAATATAGCGTAGA+AGG - chr5_1:59015070-59015089 Msa0740190:CDS 40.0%
!! GAAGGAACTAAGTTGATGTG+GGG - chr5_1:59015088-59015107 Msa0740190:CDS 40.0%
!! AAGGAACTAAGTTGATGTGG+GGG - chr5_1:59015089-59015108 Msa0740190:CDS 40.0%
ATTTGGTCGGATGGAAAAGT+GGG + chr5_1:59015274-59015293 None:intergenic 40.0%
TATTTGGTCGGATGGAAAAG+TGG + chr5_1:59015275-59015294 None:intergenic 40.0%
ATGGATAGACAGAGAGAAAG+AGG + chr5_1:59015319-59015338 None:intergenic 40.0%
TACTACTTCTATTTGGAGGC+TGG + chr5_1:59015373-59015392 None:intergenic 40.0%
TCCAGAGATGGAAAACTAGT+TGG + chr5_1:59015764-59015783 None:intergenic 40.0%
!!! AACTAGTTTTCCATCTCTGG+AGG - chr5_1:59015763-59015782 Msa0740190:CDS 40.0%
CTAATCTGAGCTAAGGGTTA+AGG + chr5_1:59015896-59015915 None:intergenic 40.0%
GCTCAACTAATCTGAGCTAA+GGG + chr5_1:59015902-59015921 None:intergenic 40.0%
AGCTCAACTAATCTGAGCTA+AGG + chr5_1:59015903-59015922 None:intergenic 40.0%
!! GATTTTAACATGGGTGGGTT+GGG + chr5_1:59015927-59015946 None:intergenic 40.0%
!! AGATTTTAACATGGGTGGGT+TGG + chr5_1:59015928-59015947 None:intergenic 40.0%
ACCCACCCATGTTAAAATCT+AGG - chr5_1:59015928-59015947 Msa0740190:CDS 40.0%
!! GCCTAGATTTTAACATGGGT+GGG + chr5_1:59015932-59015951 None:intergenic 40.0%
!! AGCCTAGATTTTAACATGGG+TGG + chr5_1:59015933-59015952 None:intergenic 40.0%
!!! TTTCGACGCTTTTTTGACAC+AGG + chr5_1:59016162-59016181 None:intergenic 40.0%
AGTTTCATTTAATAGCCGGG+TGG - chr5_1:59016194-59016213 Msa0740190:five_prime_UTR 40.0%
TACATACTGACATAACCACC+CGG + chr5_1:59016212-59016231 None:intergenic 40.0%
!! GTATCATTTTGATGGCTGTG+TGG - chr5_1:59016229-59016248 Msa0740190:intron 40.0%
! AGGCAGAAGACTTGTTTGAT+AGG - chr5_1:59016362-59016381 Msa0740190:intron 40.0%
! ATTGATTGTTTGGAGCTGCA+GGG + chr5_1:59016410-59016429 None:intergenic 40.0%
! AATTGATTGTTTGGAGCTGC+AGG + chr5_1:59016411-59016430 None:intergenic 40.0%
ATGGGTTTAAGAACATGTCC+AGG - chr5_1:59016444-59016463 Msa0740190:intron 40.0%
TGGGTTTAAGAACATGTCCA+GGG - chr5_1:59016445-59016464 Msa0740190:intron 40.0%
! ACGGTGTTAGGGAAGAGTTA+GGG + chr5_1:59010579-59010598 None:intergenic 45.0%
TGTAGGTGTGTGAACAATGC+GGG + chr5_1:59010611-59010630 None:intergenic 45.0%
GTGTGGAGAGTAGAAAAGAG+TGG - chr5_1:59010927-59010946 Msa0740190:three_prime_UTR 45.0%
! TCATGCTGAGGGTATGGTTT+CGG - chr5_1:59011224-59011243 Msa0740190:intron 45.0%
TAGTGAGTATGCTAGACGGT+CGG - chr5_1:59011314-59011333 Msa0740190:intron 45.0%
!! AGCTCAAAAGCTGGTTTGCA+CGG - chr5_1:59011342-59011361 Msa0740190:intron 45.0%
CACGGTCAGTTTAATGCTGA+TGG - chr5_1:59011360-59011379 Msa0740190:intron 45.0%
GCAGGGAAGGTTTGAAAAGA+AGG - chr5_1:59011412-59011431 Msa0740190:intron 45.0%
AAGGATGACTGAAAGTTGCG+AGG - chr5_1:59011431-59011450 Msa0740190:intron 45.0%
AAAGTTGCGAGGCGATGATT+AGG - chr5_1:59011442-59011461 Msa0740190:intron 45.0%
GAAGGAACATAGCCATTCTC+TGG - chr5_1:59011509-59011528 Msa0740190:CDS 45.0%
GCCTGAAACTTACAAAGGAC+TGG - chr5_1:59011596-59011615 Msa0740190:intron 45.0%
CCCAGTCCTTTGTAAGTTTC+AGG + chr5_1:59011600-59011619 None:intergenic 45.0%
TTTGGGCAGATGCAAGATCA+AGG - chr5_1:59011901-59011920 Msa0740190:intron 45.0%
!!! TTTTGGTGATGCAGTTACCC+TGG - chr5_1:59011938-59011957 Msa0740190:intron 45.0%
TGCTCTATGTGTTGTGTCCA+GGG + chr5_1:59011958-59011977 None:intergenic 45.0%
TTGCTCTATGTGTTGTGTCC+AGG + chr5_1:59011959-59011978 None:intergenic 45.0%
TGCCATATGCTCCATTCACT+GGG - chr5_1:59011991-59012010 Msa0740190:intron 45.0%
ATCCCAGTGAATGGAGCATA+TGG + chr5_1:59011996-59012015 None:intergenic 45.0%
TTTATGCAGTGACGTGCTTG+GGG + chr5_1:59012191-59012210 None:intergenic 45.0%
GTTTATGCAGTGACGTGCTT+GGG + chr5_1:59012192-59012211 None:intergenic 45.0%
TGTTTATGCAGTGACGTGCT+TGG + chr5_1:59012193-59012212 None:intergenic 45.0%
CGAGAAGGCCACGAAAAATT+GGG - chr5_1:59012227-59012246 Msa0740190:intron 45.0%
AAGGATGCATGCGACATACA+TGG + chr5_1:59012253-59012272 None:intergenic 45.0%
! ATGAACTCAGAGGGCATGAT+TGG - chr5_1:59012360-59012379 Msa0740190:intron 45.0%
GAGGCTTCAAATCCTTGAGT+AGG + chr5_1:59012461-59012480 None:intergenic 45.0%
TAGGCAGTATGAACTAGCTC+TGG - chr5_1:59012529-59012548 Msa0740190:intron 45.0%
TCTAAAGACACCTTCGCCAA+TGG - chr5_1:59012610-59012629 Msa0740190:intron 45.0%
ATCCTCTTCGATTCTGTTGG+CGG + chr5_1:59012714-59012733 None:intergenic 45.0%
CCAACAGAATCGAAGAGGAT+GGG - chr5_1:59012714-59012733 Msa0740190:intron 45.0%
CAACAGAATCGAAGAGGATG+GGG - chr5_1:59012715-59012734 Msa0740190:intron 45.0%
CCCACTACATCTTAAAACGG+TGG - chr5_1:59012912-59012931 Msa0740190:intron 45.0%
ACCTTCCTCAGCATATCTGA+TGG + chr5_1:59013038-59013057 None:intergenic 45.0%
!! GCAATGACTGGTCTTAGAGA+AGG - chr5_1:59013085-59013104 Msa0740190:intron 45.0%
!! ATGACTGGTCTTAGAGAAGG+TGG - chr5_1:59013088-59013107 Msa0740190:intron 45.0%
!! CAACTAATCATCGACTCAGC+TGG - chr5_1:59013155-59013174 Msa0740190:CDS 45.0%
TGAAGTAGGGGTTCTCTTGT+CGG + chr5_1:59013197-59013216 None:intergenic 45.0%
! AGATCAGCCATTGGTTGAAC+AGG + chr5_1:59013301-59013320 None:intergenic 45.0%
TGATGGTCCACCTGAAAACA+CGG - chr5_1:59013558-59013577 Msa0740190:intron 45.0%
! TCTTGCCATACCGTGTTTTC+AGG + chr5_1:59013571-59013590 None:intergenic 45.0%
GTTGCAATTTAGGCGACTAG+GGG + chr5_1:59013681-59013700 None:intergenic 45.0%
GGTTGCAATTTAGGCGACTA+GGG + chr5_1:59013682-59013701 None:intergenic 45.0%
AGGTTGCAATTTAGGCGACT+AGG + chr5_1:59013683-59013702 None:intergenic 45.0%
GTCGCCTAAATTGCAACCTT+TGG - chr5_1:59013684-59013703 Msa0740190:CDS 45.0%
CTGCAATGAAGGCAAACCAA+AGG + chr5_1:59013703-59013722 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr5_1:59013828-59013847 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr5_1:59013825-59013844 Msa0740190:CDS 45.0%
GAAGTCAATGACGTGGGTAA+TGG - chr5_1:59013927-59013946 Msa0740190:CDS 45.0%
AGTAGCCGTTGTCAATCTCA+AGG - chr5_1:59013978-59013997 Msa0740190:CDS 45.0%
CTTGAGAAACTCCTGCCATT+CGG - chr5_1:59014086-59014105 Msa0740190:CDS 45.0%
GGTTAAGTTCCATCTCTCTC+GGG - chr5_1:59014256-59014275 Msa0740190:CDS 45.0%
GAAGTCTATGACTGAAGTCG+GGG - chr5_1:59014298-59014317 Msa0740190:CDS 45.0%
GGGATGTAAAGCAAAAAGGG+TGG - chr5_1:59014490-59014509 Msa0740190:CDS 45.0%
AAGAAAGAATCTGGCTGTCG+AGG - chr5_1:59014538-59014557 Msa0740190:CDS 45.0%
!! TAGTCTATGGTCTTTGAGGC+TGG - chr5_1:59014611-59014630 Msa0740190:CDS 45.0%
TGAAGATGCTGTCGAGAATG+TGG - chr5_1:59014689-59014708 Msa0740190:CDS 45.0%
! GTCTAAGATGCTTTGGTTGC+GGG - chr5_1:59014935-59014954 Msa0740190:CDS 45.0%
TTTGGTCGGATGGAAAAGTG+GGG + chr5_1:59015273-59015292 None:intergenic 45.0%
CCTTTGCTTATTTGGTCGGA+TGG + chr5_1:59015283-59015302 None:intergenic 45.0%
CCATCCGACCAAATAAGCAA+AGG - chr5_1:59015280-59015299 Msa0740190:CDS 45.0%
!! TGTCTCAGCTTGATAATGCC+CGG - chr5_1:59015547-59015566 Msa0740190:CDS 45.0%
TCAAGTATCCAGGGATGCAT+TGG - chr5_1:59015596-59015615 Msa0740190:CDS 45.0%
CAAGTATCCAGGGATGCATT+GGG - chr5_1:59015597-59015616 Msa0740190:CDS 45.0%
!!! GCCAACTAGTTTTCCATCTC+TGG - chr5_1:59015760-59015779 Msa0740190:CDS 45.0%
GATTATTACGCCTCCAGAGA+TGG + chr5_1:59015776-59015795 None:intergenic 45.0%
AGCTAAGGGTTAAGGAGTTG+AGG + chr5_1:59015888-59015907 None:intergenic 45.0%
!! TCATTTTGATGGCTGTGTGG+TGG - chr5_1:59016232-59016251 Msa0740190:intron 45.0%
ACGGTAGTTGTCACCAAACT+TGG + chr5_1:59016523-59016542 None:intergenic 45.0%
! GACGGTGTTAGGGAAGAGTT+AGG + chr5_1:59010580-59010599 None:intergenic 50.0%
TAGGTGTGTGAACAATGCGG+GGG + chr5_1:59010609-59010628 None:intergenic 50.0%
GTAGGTGTGTGAACAATGCG+GGG + chr5_1:59010610-59010629 None:intergenic 50.0%
GGATATACATGGTGGCACGT+TGG - chr5_1:59011009-59011028 Msa0740190:intron 50.0%
AAACTCGGGATCTCATGCTG+AGG - chr5_1:59011212-59011231 Msa0740190:intron 50.0%
AACTCGGGATCTCATGCTGA+GGG - chr5_1:59011213-59011232 Msa0740190:intron 50.0%
AGTGAGTATGCTAGACGGTC+GGG - chr5_1:59011315-59011334 Msa0740190:intron 50.0%
TCGGGTTTCAGCTCAAAAGC+TGG - chr5_1:59011333-59011352 Msa0740190:intron 50.0%
GAGTTTGTGTGTAGCAGGGA+AGG - chr5_1:59011399-59011418 Msa0740190:intron 50.0%
GGAACATAGCCATTCTCTGG+CGG - chr5_1:59011512-59011531 Msa0740190:CDS 50.0%
! TATCAGGTACCGCCAGAGAA+TGG + chr5_1:59011524-59011543 None:intergenic 50.0%
TTCTCTGGCGGTACCTGATA+AGG - chr5_1:59011524-59011543 Msa0740190:CDS 50.0%
AGACATTAGGGAGGGATGCT+CGG - chr5_1:59011784-59011803 Msa0740190:intron 50.0%
AAAGTGCAGGCTGAAAACCC+TGG - chr5_1:59011828-59011847 Msa0740190:intron 50.0%
GTGCCATATGCTCCATTCAC+TGG - chr5_1:59011990-59012009 Msa0740190:intron 50.0%
GCGAGAAGGCCACGAAAAAT+TGG - chr5_1:59012226-59012245 Msa0740190:intron 50.0%
GACAACGCCGTCCAAAAAAG+AGG + chr5_1:59012480-59012499 None:intergenic 50.0%
! TTTTGGACGGCGTTGTCAAC+CGG - chr5_1:59012483-59012502 Msa0740190:intron 50.0%
!! GGCGAAGGTGTCTTTAGAAC+TGG + chr5_1:59012608-59012627 None:intergenic 50.0%
ACCTTCGCCAATGGAGAATC+AGG - chr5_1:59012619-59012638 Msa0740190:intron 50.0%
ACCTGATTCTCCATTGGCGA+AGG + chr5_1:59012623-59012642 None:intergenic 50.0%
TACCGCCAACAGAATCGAAG+AGG - chr5_1:59012709-59012728 Msa0740190:intron 50.0%
GCCAACAGAATCGAAGAGGA+TGG - chr5_1:59012713-59012732 Msa0740190:intron 50.0%
CCCATCCTCTTCGATTCTGT+TGG + chr5_1:59012717-59012736 None:intergenic 50.0%
CAGCATATCTGATGGCTTCC+CGG + chr5_1:59013030-59013049 None:intergenic 50.0%
GGAAGCCATCAGATATGCTG+AGG - chr5_1:59013030-59013049 Msa0740190:intron 50.0%
GCCATCAGATATGCTGAGGA+AGG - chr5_1:59013034-59013053 Msa0740190:intron 50.0%
!! TGAGGAAGGTGCTGTAGCTA+TGG - chr5_1:59013048-59013067 Msa0740190:intron 50.0%
GAAGTAGGGGTTCTCTTGTC+GGG + chr5_1:59013196-59013215 None:intergenic 50.0%
CGATGCTCCTGTTCAACCAA+TGG - chr5_1:59013291-59013310 Msa0740190:intron 50.0%
TTTACCACAAACGACCCCAG+TGG - chr5_1:59013324-59013343 Msa0740190:intron 50.0%
! AACTTGCTTACGTGCCACTG+GGG + chr5_1:59013341-59013360 None:intergenic 50.0%
! CAACTTGCTTACGTGCCACT+GGG + chr5_1:59013342-59013361 None:intergenic 50.0%
! TCAACTTGCTTACGTGCCAC+TGG + chr5_1:59013343-59013362 None:intergenic 50.0%
GGACCATCATCTTGCTGAAG+AGG + chr5_1:59013547-59013566 None:intergenic 50.0%
GTCCACCTGAAAACACGGTA+TGG - chr5_1:59013563-59013582 Msa0740190:CDS 50.0%
!! TGCCATACCGTGTTTTCAGG+TGG + chr5_1:59013568-59013587 None:intergenic 50.0%
! GGTGTTGGAAGCTGCAATGA+AGG + chr5_1:59013714-59013733 None:intergenic 50.0%
!!! TTTTGTTGGCTTTGAGGGGG+TGG - chr5_1:59013738-59013757 Msa0740190:CDS 50.0%
! GGGTGGATTTAGTCCCACAT+CGG - chr5_1:59013755-59013774 Msa0740190:CDS 50.0%
GAGTGCTATCTGTCCGATGT+GGG + chr5_1:59013771-59013790 None:intergenic 50.0%
! AGAGTGCTATCTGTCCGATG+TGG + chr5_1:59013772-59013791 None:intergenic 50.0%
GCACTTCTCACCTTACAAGC+CGG - chr5_1:59013815-59013834 Msa0740190:CDS 50.0%
ACAACGGCTACTCTGTTCTC+TGG + chr5_1:59013970-59013989 None:intergenic 50.0%
AAGGACCATGGTCAACCGAA+TGG + chr5_1:59014104-59014123 None:intergenic 50.0%
CATCTCTCTCGGGTTACTGT+GGG - chr5_1:59014266-59014285 Msa0740190:CDS 50.0%
!! TCTATGGTCTTTGAGGCTGG+TGG - chr5_1:59014614-59014633 Msa0740190:CDS 50.0%
!! GTCTCAGCTTGATAATGCCC+GGG - chr5_1:59015548-59015567 Msa0740190:CDS 50.0%
!! CTTGATAATGCCCGGGTTTC+TGG - chr5_1:59015555-59015574 Msa0740190:CDS 50.0%
CAGCACAAGAAAGTTGCTCG+CGG + chr5_1:59015650-59015669 None:intergenic 50.0%
GGTTAAGGAGTTGAGGTCCA+GGG + chr5_1:59015881-59015900 None:intergenic 50.0%
GGTCTTCTCCGACTCTGCAA+CGG - chr5_1:59010533-59010552 Msa0740190:three_prime_UTR 55.0%
! GGGGCAAAACGACGGTGTTA+GGG + chr5_1:59010590-59010609 None:intergenic 55.0%
ACAATGCGGGGGCAAAACGA+CGG + chr5_1:59010598-59010617 None:intergenic 55.0%
CGGAGAAGGAAGTGGATCGA+TGG - chr5_1:59011146-59011165 Msa0740190:intron 55.0%
GGGATCTCATGCTGAGGGTA+TGG - chr5_1:59011218-59011237 Msa0740190:intron 55.0%
TTCGGAGCCGTATTTGGGCA+TGG - chr5_1:59011257-59011276 Msa0740190:intron 55.0%
TCCGGGAGTTTGTGTGTAGC+AGG - chr5_1:59011394-59011413 Msa0740190:intron 55.0%
CCCTGCTACACACAAACTCC+CGG + chr5_1:59011398-59011417 None:intergenic 55.0%
CCGGGAGTTTGTGTGTAGCA+GGG - chr5_1:59011395-59011414 Msa0740190:intron 55.0%
TCTGGCGGTACCTGATAAGG+TGG - chr5_1:59011527-59011546 Msa0740190:CDS 55.0%
GACATTAGGGAGGGATGCTC+GGG - chr5_1:59011785-59011804 Msa0740190:intron 55.0%
CACGGTATGCCAATCTGTGC+CGG - chr5_1:59013008-59013027 Msa0740190:intron 55.0%
ACGGTATGCCAATCTGTGCC+GGG - chr5_1:59013009-59013028 Msa0740190:intron 55.0%
AGGGGTTCTCTTGTCGGGAT+CGG + chr5_1:59013191-59013210 None:intergenic 55.0%
!! AACTCGCTGACGAGGCATTG+GGG + chr5_1:59013407-59013426 None:intergenic 55.0%
! CAACTCGCTGACGAGGCATT+GGG + chr5_1:59013408-59013427 None:intergenic 55.0%
TCAACTCGCTGACGAGGCAT+TGG + chr5_1:59013409-59013428 None:intergenic 55.0%
GGACTATCAACTCGCTGACG+AGG + chr5_1:59013415-59013434 None:intergenic 55.0%
TGGACCATCAACTCGCTGAC+GGG + chr5_1:59013449-59013468 None:intergenic 55.0%
GTGGACCATCAACTCGCTGA+CGG + chr5_1:59013450-59013469 None:intergenic 55.0%
!! ATCTCGCTGACGAGGCATTG+GGG + chr5_1:59013506-59013525 None:intergenic 55.0%
! CATCTCGCTGACGAGGCATT+GGG + chr5_1:59013507-59013526 None:intergenic 55.0%
TCATCTCGCTGACGAGGCAT+TGG + chr5_1:59013508-59013527 None:intergenic 55.0%
ATGCCTCGTCAGCGAGATGA+TGG - chr5_1:59013508-59013527 Msa0740190:intron 55.0%
!! ATCTTGCTGAAGAGGCGCTG+GGG + chr5_1:59013539-59013558 None:intergenic 55.0%
!! CATCTTGCTGAAGAGGCGCT+GGG + chr5_1:59013540-59013559 None:intergenic 55.0%
! TCATCTTGCTGAAGAGGCGC+TGG + chr5_1:59013541-59013560 None:intergenic 55.0%
GCGCCTCTTCAGCAAGATGA+TGG - chr5_1:59013541-59013560 Msa0740190:intron 55.0%
CTAGGGGCAGACCGCAATAA+AGG + chr5_1:59013665-59013684 None:intergenic 55.0%
TCCTGCCATTCGGTTGACCA+TGG - chr5_1:59014096-59014115 Msa0740190:CDS 55.0%
ACCATGGTCAACCGAATGGC+AGG + chr5_1:59014100-59014119 None:intergenic 55.0%
CCACAGTAACCCGAGAGAGA+TGG + chr5_1:59014268-59014287 None:intergenic 55.0%
CCATCTCTCTCGGGTTACTG+TGG - chr5_1:59014265-59014284 Msa0740190:CDS 55.0%
!! GTCTTTGAGGCTGGTGGCAT+AGG - chr5_1:59014620-59014639 Msa0740190:CDS 55.0%
TTCAGACTCGCCAGAAACCC+GGG + chr5_1:59015568-59015587 None:intergenic 55.0%
CTTCAGACTCGCCAGAAACC+CGG + chr5_1:59015569-59015588 None:intergenic 55.0%
! GGGTGCTGTGCTACGATCAA+TGG - chr5_1:59015617-59015636 Msa0740190:CDS 55.0%
CCAGGGTTCAAACCATGGCA+AGG + chr5_1:59015864-59015883 None:intergenic 55.0%
CCTTGCCATGGTTTGAACCC+TGG - chr5_1:59015861-59015880 Msa0740190:CDS 55.0%
GAGGTCCAGGGTTCAAACCA+TGG + chr5_1:59015869-59015888 None:intergenic 55.0%
GGGTTAAGGAGTTGAGGTCC+AGG + chr5_1:59015882-59015901 None:intergenic 55.0%
! TGTTTGGAGCTGCAGGGTAG+AGG + chr5_1:59016404-59016423 None:intergenic 55.0%
CTTCTCCGACTCTGCAACGG+CGG - chr5_1:59010536-59010555 Msa0740190:three_prime_UTR 60.0%
AAGCTCCGCCGTTGCAGAGT+CGG + chr5_1:59010544-59010563 None:intergenic 60.0%
GGGGGCAAAACGACGGTGTT+AGG + chr5_1:59010591-59010610 None:intergenic 60.0%
! GGACTGGGGCTTGTTCCAAC+TGG - chr5_1:59011612-59011631 Msa0740190:intron 60.0%
!! CTCGTTTTTGCGGCAGCTGC+AGG + chr5_1:59011705-59011724 None:intergenic 60.0%
GATGGCTTCCCGGCACAGAT+TGG + chr5_1:59013020-59013039 None:intergenic 60.0%
!! AACTCGCTGACGAGGCACTG+GGG + chr5_1:59013374-59013393 None:intergenic 60.0%
! CAACTCGCTGACGAGGCACT+GGG + chr5_1:59013375-59013394 None:intergenic 60.0%
TCAACTCGCTGACGAGGCAC+TGG + chr5_1:59013376-59013395 None:intergenic 60.0%
GGACTCTCAACTCGCTGACG+AGG + chr5_1:59013382-59013401 None:intergenic 60.0%
AACTCGCTGACGGGACACTG+GGG + chr5_1:59013440-59013459 None:intergenic 60.0%
CAACTCGCTGACGGGACACT+GGG + chr5_1:59013441-59013460 None:intergenic 60.0%
TCAACTCGCTGACGGGACAC+TGG + chr5_1:59013442-59013461 None:intergenic 60.0%
! GTGTCCCGTCAGCGAGTTGA+TGG - chr5_1:59013442-59013461 Msa0740190:intron 60.0%
TCAACTCGCCTACGAGGCAC+TGG + chr5_1:59013475-59013494 None:intergenic 60.0%
! GTGCCTCGTAGGCGAGTTGA+TGG - chr5_1:59013475-59013494 Msa0740190:intron 60.0%
GGACCATCAACTCGCCTACG+AGG + chr5_1:59013481-59013500 None:intergenic 60.0%
GGACCATCATCTCGCTGACG+AGG + chr5_1:59013514-59013533 None:intergenic 60.0%
!! TCTTGCTGAAGAGGCGCTGG+GGG + chr5_1:59013538-59013557 None:intergenic 60.0%
GGGGCAGACCGCAATAAAGG+CGG + chr5_1:59013662-59013681 None:intergenic 60.0%
CACAGCACCCAATGCATCCC+TGG + chr5_1:59015607-59015626 None:intergenic 60.0%
! CGTGCCACTGGGGTCGTTTG+TGG + chr5_1:59013331-59013350 None:intergenic 65.0%
!! CGCTGACGAGGCATTGGGGA+TGG + chr5_1:59013403-59013422 None:intergenic 65.0%
GTCCACGACCAGTGCCTCGT+AGG - chr5_1:59013464-59013483 Msa0740190:intron 65.0%
!! CGCTGACGAGGCATTGGGGA+TGG + chr5_1:59013403-59013422 None:intergenic 65.0%
GAGGGATGCTCGGGACCTGC+TGG - chr5_1:59011794-59011813 Msa0740190:intron 70.0%
!! CGCTGACGAGGCACTGGGGA+TGG + chr5_1:59013370-59013389 None:intergenic 70.0%
CGCTGACGGGACACTGGGGA+TGG + chr5_1:59013436-59013455 None:intergenic 70.0%
!! CGCCTACGAGGCACTGGTCG+TGG + chr5_1:59013469-59013488 None:intergenic 70.0%
!! TGCTGAAGAGGCGCTGGGGG+CGG + chr5_1:59013535-59013554 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 59010499 59016641 59010499 ID=Msa0740190;Name=Msa0740190
chr5_1 mRNA 59010499 59016641 59010499 ID=Msa0740190-mRNA-1;Parent=Msa0740190;Name=Msa0740190-mRNA-1;_AED=0.02;_eAED=0.02;_QI=389|1|1|1|0.8|0.66|6|456|951
chr5_1 exon 59010499 59010999 59010499 ID=Msa0740190-mRNA-1:exon:16919;Parent=Msa0740190-mRNA-1
chr5_1 exon 59011472 59011585 59011472 ID=Msa0740190-mRNA-1:exon:16918;Parent=Msa0740190-mRNA-1
chr5_1 exon 59012773 59012922 59012773 ID=Msa0740190-mRNA-1:exon:16917;Parent=Msa0740190-mRNA-1
chr5_1 exon 59013141 59013230 59013141 ID=Msa0740190-mRNA-1:exon:16916;Parent=Msa0740190-mRNA-1
chr5_1 exon 59013561 59016242 59013561 ID=Msa0740190-mRNA-1:exon:16915;Parent=Msa0740190-mRNA-1
chr5_1 exon 59016478 59016641 59016478 ID=Msa0740190-mRNA-1:exon:16914;Parent=Msa0740190-mRNA-1
chr5_1 five_prime_UTR 59016478 59016641 59016478 ID=Msa0740190-mRNA-1:five_prime_utr;Parent=Msa0740190-mRNA-1
chr5_1 five_prime_UTR 59016018 59016242 59016018 ID=Msa0740190-mRNA-1:five_prime_utr;Parent=Msa0740190-mRNA-1
chr5_1 CDS 59013561 59016017 59013561 ID=Msa0740190-mRNA-1:cds;Parent=Msa0740190-mRNA-1
chr5_1 CDS 59013141 59013230 59013141 ID=Msa0740190-mRNA-1:cds;Parent=Msa0740190-mRNA-1
chr5_1 CDS 59012773 59012922 59012773 ID=Msa0740190-mRNA-1:cds;Parent=Msa0740190-mRNA-1
chr5_1 CDS 59011472 59011585 59011472 ID=Msa0740190-mRNA-1:cds;Parent=Msa0740190-mRNA-1
chr5_1 CDS 59010955 59010999 59010955 ID=Msa0740190-mRNA-1:cds;Parent=Msa0740190-mRNA-1
chr5_1 three_prime_UTR 59010499 59010954 59010499 ID=Msa0740190-mRNA-1:three_prime_utr;Parent=Msa0740190-mRNA-1
Gene Sequence

>Msa0740190

ATGGATGTTCATGTGATAACTATCGGAGAAGGAAGTGGATCGATGGAACATAATGTGGATGCTGAATTTGGTCAAGTTAATGATGCTGGAAACTCGGGATCTCATGCTGAGGGTATGGTTTCGGAGCCATATTTTTCGGAGCCGTATTTGGGCATGGTATTTGATTCTGAAGATTCTGCTAAAAGTTTTTATAGTGAGTATGCTAGACGGTCGGGTTTCAGCTCAAAAGCTGGTTTGCACGGTCAGTTTAATGCTGATGGGACAAATATGTTCCGGGAGTTTGTGTGTAGCAGGGAAGGTTTGAAAAGAAGGATGACTGAAAGTTGCGAGGCGATGATTAGGATAGAGCAAAAGGGTCAAAATAAGTGGGTTGTTACAAAATTTGTGAAGGAACATAGCCATTCTCTGGCGGTACCTGATAAGGTGGAAAAACTTCAACCAGTGAAGCACTTTTCTAGTGTTGGAAGAACCATGCCTGAAACTTACAAAGGACTGGGGCTTGTTCCAACTGGTGTCATGTATATATCTATTGATGCGCATCACGTTTCCTCTGACAATAGTCAAAAGATTAGGAATTCTCCTGCAGCTGCCGCAAAAACGAGTCATCCAGTTAAAAATTCCACTTCGATGCCTTATAATGTGAGGCAACCCATTAAAAAGAAGACATTAGGGAGGGATGCTCGGGACCTGCTGGAGTATTTTATGAAAGTGCAGGCTGAAAACCCTGGTTTCTTCTATGCAATACAACTTGATGAAGAAAATCGTATGTCTAATGTGTTTTGGGCAGATGCAAGATCAAGGACAGCTTACAGTCATTTTGGTGATGCAGTTACCCTGGACACAACACATAGAGCAAATCAATATAATGTGCCATATGCTCCATTCACTGGGATAAACCATCATGGTCAAATGATTTTGTTTGGTTGTGCACTCATATTTGATGATTCTGAGGCTTCTTTTGGTTGGCTCTTAAAGACATTTCTAGCAGCTATGAATGACCGTCACCCTCTCTCTATAACTACCGATCAGGACAGATGCATACAAACAGCAGTATCACAAGTTTTTCCCCAAGCACGTCACTGCATAAACAAACGTTATGTCTTGCGAGAAGGCCACGAAAAATTGGGCCATGTATGTCGCATGCATCCTTATTTTCACTATGAACTCTATAATTGCATTAACCTGACAGAAACAATTGAGGAGTTTGATTTTTCTTGGAATTCTATCATAGACAAATATGAACTCAGAGGGCATGATTGGCTTCAGTCCTTGTATAGTGCTCGTGATCAATGGGTTCCAGCATATTTCCGTGATTCATTTTTCGCTGTAATATCTCCTACTCAAGGATTTGAAGCCTCTTTTTTGGACGGCGTTGTCAACCGGCATACAACATTACCAATGTTCTTTAGGCAGTATGAACTAGCTCTGGAGAAATGGTTTGAAAAGGAAATAGAATCAGATTTTGAGACAATTAGCACTAATCCAGTTCTAAAGACACCTTCGCCAATGGAGAATCAGGTTGCTAAGCTTTATACACAGAGAATATTTTTGAAGTTTCAAGAAGAGCTAGTTGAAACTTTTGCTTATACCGCCAACAGAATCGAAGAGGATGGGGTGAATAGCATATTTGGAGTTGCAAAGTTTGATGATGTCGAAAAGTCGTACACTGTCACATTAAACCAGTCTGAATTGAGAGCTAACTGTACATGCCAAATGTTTGAGTTTTCAGGCATTCTTTGTAGGCACATTTTAACTGTTTTTACCGTGTCTAATGTATTCACTATACCATCCCACTACATCTTAAAACGGTGGACAATGGAAGCAAAAAACAGTATTGTATTGGACGAATGTGGTGGTGAATCACTTGCATATGAGTCTTTGACATCACGGTATGCCAATCTGTGCCGGGAAGCCATCAGATATGCTGAGGAAGGTGCTGTAGCTATGGAAACTTATGATGCTGCAATGACTGGTCTTAGAGAAGGTGGAAAGAAAGTTGATGTCATGAAGAGAAATATTGCCAAAGTGTCATCAACTAATCATCGACTCAGCTGGAATGATTGCTCCGATCCCGACAAGAGAACCCCTACTTCAACATCAGATACAAGTACAATCCCTCTTTTATGGCCACTTAACGATGAAACATCGACGTTTAATCTTAATGACGTCGATGCTCCTGTTCAACCAATGGCTGATCTGAATTTACCACAAACGACCCCAGTGGCACGTAAGCAAGTTGATGTTCCATCCCCAGTGCCTCGTCAGCGAGTTGAGAGTCCATCCCCAATGCCTCGTCAGCGAGTTGATAGTCCATCCCCAGTGTCCCGTCAGCGAGTTGATGGTCCACGACCAGTGCCTCGTAGGCGAGTTGATGGTCCATCCCCAATGCCTCGTCAGCGAGATGATGGTCCGCCCCCAGCGCCTCTTCAGCAAGATGATGGTCCACCTGAAAACACGGTGGCTCTTCCATCTTTGAAGTCAATGACGTGGGTAATGGAGAACAAAACCTCAAATCCAGAGAACAGAGTAGCCGTTGTCAATCTCAAGTTGCAAGATTACAACAAGAGTCCATCAACAGAATATGAGGTTAAGTTCCATCTCTCTCGGGTTACTGTGGGACCTGTTTTGAAGTCTATGACTGAAGTCGGGGAACAACTTTCAACAACAGCAAACAAGGTTGCTGTAATAAATCTCAAGCTTGATAATGCCCGGGTTTCTGGCGAGTCTGAAGTTAAGTTTCAAGTATCCAGGGATGCATTGGGTGCTGTGCTACGATCAATGGCTTATATCCGCGAGCAACTTTCTTGTGCTGGCGACGCGAACTCAGAACCTGTGTCAAAAAAGCGTCGAAACTGA
Protein sequence

>Msa0740190

MDVHVITIGEGSGSMEHNVDAEFGQVNDAGNSGSHAEGMVSEPYFSEPYLGMVFDSEDSAKSFYSEYARRSGFSSKAGLHGQFNADGTNMFREFVCSREGLKRRMTESCEAMIRIEQKGQNKWVVTKFVKEHSHSLAVPDKVEKLQPVKHFSSVGRTMPETYKGLGLVPTGVMYISIDAHHVSSDNSQKIRNSPAAAAKTSHPVKNSTSMPYNVRQPIKKKTLGRDARDLLEYFMKVQAENPGFFYAIQLDEENRMSNVFWADARSRTAYSHFGDAVTLDTTHRANQYNVPYAPFTGINHHGQMILFGCALIFDDSEASFGWLLKTFLAAMNDRHPLSITTDQDRCIQTAVSQVFPQARHCINKRYVLREGHEKLGHVCRMHPYFHYELYNCINLTETIEEFDFSWNSIIDKYELRGHDWLQSLYSARDQWVPAYFRDSFFAVISPTQGFEASFLDGVVNRHTTLPMFFRQYELALEKWFEKEIESDFETISTNPVLKTPSPMENQVAKLYTQRIFLKFQEELVETFAYTANRIEEDGVNSIFGVAKFDDVEKSYTVTLNQSELRANCTCQMFEFSGILCRHILTVFTVSNVFTIPSHYILKRWTMEAKNSIVLDECGGESLAYESLTSRYANLCREAIRYAEEGAVAMETYDAAMTGLREGGKKVDVMKRNIAKVSSTNHRLSWNDCSDPDKRTPTSTSDTSTIPLLWPLNDETSTFNLNDVDAPVQPMADLNLPQTTPVARKQVDVPSPVPRQRVESPSPMPRQRVDSPSPVSRQRVDGPRPVPRRRVDGPSPMPRQRDDGPPPAPLQQDDGPPENTVALPSLKSMTWVMENKTSNPENRVAVVNLKLQDYNKSPSTEYEVKFHLSRVTVGPVLKSMTEVGEQLSTTANKVAVINLKLDNARVSGESEVKFQVSRDALGAVLRSMAYIREQLSCAGDANSEPVSKKRRN*