AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0860900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0860900 MtrunA17_Chr5g0440451 96.320 951 19 2 1 951 1 935 0.0 1889
Msa0860900 MtrunA17_Chr3g0118611 68.637 609 186 3 143 750 34 638 0.0 864
Msa0860900 MtrunA17_Chr3g0118611 67.808 146 46 1 806 950 628 773 7.35e-52 195
Msa0860900 MtrunA17_Chr5g0448761 42.814 661 336 9 47 683 59 701 0.0 552
Msa0860900 MtrunA17_Chr5g0448511 50.540 463 225 2 219 677 5 467 6.04e-164 491
Msa0860900 MtrunA17_Chr1g0202341 34.018 682 397 12 18 670 16 673 9.30e-124 391
Msa0860900 MtrunA17_Chr2g0287061 36.817 622 345 11 47 666 182 757 1.06e-113 368
Msa0860900 MtrunA17_Chr2g0287061 37.778 90 56 0 47 136 28 117 5.19e-12 70.1
Msa0860900 MtrunA17_Chr2g0329031 33.691 653 380 11 47 681 13 630 4.79e-110 357
Msa0860900 MtrunA17_Chr3g0080351 32.428 663 359 11 38 664 66 675 4.92e-109 357
Msa0860900 MtrunA17_Chr1g0207551 32.211 683 402 17 26 680 1 650 5.55e-107 350
Msa0860900 MtrunA17_Chr2g0296781 33.120 625 348 16 52 642 1 589 1.97e-92 309
Msa0860900 MtrunA17_Chr5g0441581 33.491 636 354 19 47 654 31 625 4.06e-92 307
Msa0860900 MtrunA17_Chr6g0477261 38.128 438 253 9 218 642 46 478 5.22e-92 306
Msa0860900 MtrunA17_Chr8g0363841 30.427 585 364 9 49 612 18 580 2.55e-90 301
Msa0860900 MtrunA17_Chr2g0291581 30.078 645 395 14 45 666 68 679 3.25e-90 302
Msa0860900 MtrunA17_Chr1g0203721 28.531 715 450 18 2 680 10 699 3.15e-82 285
Msa0860900 MtrunA17_Chr6g0458391 30.104 578 351 9 48 609 225 765 6.73e-82 281
Msa0860900 MtrunA17_Chr2g0291591 31.876 549 338 10 6 539 23 550 4.21e-79 268
Msa0860900 MtrunA17_Chr1g0196541 30.084 595 366 14 52 622 1 569 8.96e-77 266
Msa0860900 MtrunA17_Chr3g0082121 29.503 644 398 15 48 669 43 652 8.86e-73 254
Msa0860900 MtrunA17_Chr2g0324011 29.146 597 374 12 47 620 9 579 1.40e-72 251
Msa0860900 MtrunA17_Chr2g0287651 28.480 625 386 18 46 638 73 668 1.59e-72 257
Msa0860900 MtrunA17_Chr2g0276841 29.483 580 361 12 48 604 70 624 2.29e-68 242
Msa0860900 MtrunA17_Chr1g0198761 27.406 613 385 15 49 627 48 634 2.25e-64 231
Msa0860900 MtrunA17_Chr2g0294841 26.072 583 381 10 48 604 45 603 1.62e-56 209
Msa0860900 MtrunA17_Chr1g0203051 25.577 563 373 12 54 596 85 621 8.87e-56 204
Msa0860900 MtrunA17_Chr2g0290391 26.275 647 404 17 48 659 51 659 1.58e-53 199
Msa0860900 MtrunA17_Chr1g0164591 37.273 220 137 1 230 449 94 312 3.52e-44 163
Msa0860900 MtrunA17_Chr5g0431001 25.412 425 273 10 48 447 61 466 5.02e-38 149
Msa0860900 MtrunA17_Chr7g0258861 30.000 310 171 7 47 334 9 294 8.01e-36 138
Msa0860900 MtrunA17_Chr2g0308841 25.000 220 162 2 389 605 4 223 4.05e-19 88.6
Msa0860900 MtrunA17_Chr2g0329361 36.066 122 63 1 47 153 60 181 8.64e-18 84.3
Msa0860900 MtrunA17_Chr7g0254601 47.423 97 48 1 806 899 184 280 5.23e-17 82.8
Msa0860900 MtrunA17_Chr7g0233911 34.109 129 66 3 27 136 8 136 1.32e-16 79.7
Msa0860900 MtrunA17_Chr3g0078041 40.566 106 49 1 47 138 49 154 1.42e-15 77.0
Msa0860900 MtrunA17_Chr4g0033611 39.216 102 50 2 47 136 75 176 5.81e-15 75.9
Msa0860900 MtrunA17_Chr2g0329421 36.538 104 54 2 45 136 24 127 1.88e-13 70.5
Msa0860900 MtrunA17_Chr6g0476441 37.931 87 53 1 557 642 8 94 4.10e-12 68.2
Msa0860900 MtrunA17_Chr1g0149131 25.455 110 82 0 331 440 1 110 2.12e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0860900 AT2G27110.2 50.774 904 365 17 1 890 1 838 0.0 855
Msa0860900 AT2G27110.2 62.329 146 54 1 806 950 705 850 3.00e-46 179
Msa0860900 AT2G27110.1 50.774 904 365 17 1 890 1 838 0.0 855
Msa0860900 AT2G27110.1 62.329 146 54 1 806 950 705 850 3.00e-46 179
Msa0860900 AT2G27110.3 53.899 731 267 13 168 887 19 690 0.0 756
Msa0860900 AT2G27110.3 62.329 146 54 1 806 950 560 705 8.77e-47 179
Msa0860900 AT4G38180.1 41.471 680 357 7 24 681 49 709 0.0 559
Msa0860900 AT4G38170.1 48.409 440 220 3 230 666 21 456 1.65e-144 441
Msa0860900 AT3G06250.2 37.261 628 342 9 41 666 183 760 2.83e-123 392
Msa0860900 AT3G06250.2 39.560 91 55 0 47 137 27 117 1.23e-15 82.0
Msa0860900 AT3G06250.1 37.261 628 342 9 41 666 183 760 2.83e-123 392
Msa0860900 AT3G06250.1 39.560 91 55 0 47 137 27 117 1.23e-15 82.0
Msa0860900 AT3G06250.3 37.261 628 342 9 41 666 183 760 2.83e-123 392
Msa0860900 AT3G06250.3 39.560 91 55 0 47 137 27 117 1.23e-15 82.0
Msa0860900 AT5G18960.2 36.518 649 351 13 24 666 191 784 1.15e-119 384
Msa0860900 AT5G18960.2 39.604 101 61 0 47 147 42 142 2.68e-17 87.4
Msa0860900 AT5G18960.1 36.518 649 351 13 24 666 191 784 1.15e-119 384
Msa0860900 AT5G18960.1 39.604 101 61 0 47 147 42 142 2.68e-17 87.4
Msa0860900 AT4G15090.1 33.937 663 382 12 47 684 50 681 4.51e-116 375
Msa0860900 AT4G15090.5 33.937 663 382 12 47 684 50 681 4.51e-116 375
Msa0860900 AT4G15090.3 33.937 663 382 12 47 684 50 681 4.51e-116 375
Msa0860900 AT4G15090.2 33.937 663 382 12 47 684 50 681 4.51e-116 375
Msa0860900 AT4G15090.4 33.937 663 382 12 47 684 50 681 4.51e-116 375
Msa0860900 AT3G22170.2 30.928 679 381 12 14 659 41 664 2.71e-105 347
Msa0860900 AT3G22170.1 30.928 679 381 12 14 659 41 664 2.71e-105 347
Msa0860900 AT1G76320.3 31.661 638 387 10 52 673 1 605 2.14e-99 326
Msa0860900 AT1G76320.2 31.661 638 387 10 52 673 1 605 4.12e-99 327
Msa0860900 AT1G76320.1 31.661 638 387 10 52 673 1 605 4.23e-99 327
Msa0860900 AT1G76320.4 31.661 638 387 10 52 673 1 605 4.23e-99 327
Msa0860900 AT2G32250.5 30.840 655 369 10 18 660 16 598 7.83e-95 317
Msa0860900 AT2G32250.2 30.840 655 369 10 18 660 16 598 1.66e-94 317
Msa0860900 AT2G32250.4 30.840 655 369 10 18 660 16 598 1.66e-94 317
Msa0860900 AT2G32250.6 30.840 655 369 10 18 660 16 598 1.90e-94 317
Msa0860900 AT2G32250.1 30.840 655 369 10 18 660 16 598 1.90e-94 317
Msa0860900 AT2G32250.3 30.840 655 369 10 18 660 16 598 1.90e-94 317
Msa0860900 AT2G32250.8 30.918 621 353 8 52 660 1 557 2.18e-93 313
Msa0860900 AT2G32250.7 30.918 621 353 8 52 660 1 557 2.28e-93 313
Msa0860900 AT4G19990.1 37.691 459 274 7 214 665 103 556 4.35e-87 294
Msa0860900 AT4G19990.3 37.691 459 274 7 214 665 160 613 1.20e-86 294
Msa0860900 AT4G19990.4 37.691 459 274 7 214 665 160 613 1.20e-86 294
Msa0860900 AT4G19990.5 37.691 459 274 7 214 665 160 613 1.46e-86 294
Msa0860900 AT4G19990.7 37.691 459 274 7 214 665 174 627 2.60e-86 293
Msa0860900 AT4G19990.6 37.691 459 274 7 214 665 160 613 3.60e-86 293
Msa0860900 AT4G19990.2 37.691 459 274 7 214 665 160 613 3.60e-86 293
Msa0860900 AT1G52520.1 29.598 696 422 17 6 666 33 695 3.63e-86 291
Msa0860900 AT1G80010.1 29.675 647 409 15 48 669 95 720 4.18e-82 281
Msa0860900 AT1G10240.2 27.484 644 407 13 48 661 48 661 5.47e-66 235
Msa0860900 AT1G10240.1 27.484 644 407 13 48 661 48 661 5.47e-66 235
Msa0860900 AT5G28530.3 27.521 585 377 12 48 608 55 616 1.04e-59 217
Msa0860900 AT5G28530.2 27.521 585 377 12 48 608 55 616 1.04e-59 217
Msa0860900 AT5G28530.1 27.428 587 379 12 48 608 55 620 1.49e-59 217
Msa0860900 AT5G28530.5 29.712 313 206 5 299 608 252 553 2.14e-34 140
Msa0860900 AT5G28530.4 29.524 315 208 5 299 608 252 557 3.50e-34 140
Msa0860900 AT4G12850.4 33.594 128 73 2 39 154 2 129 7.49e-18 81.6
Msa0860900 AT3G59470.3 34.899 149 75 4 8 144 39 177 2.47e-17 83.2
Msa0860900 AT3G59470.1 34.899 149 75 4 8 144 39 177 2.47e-17 83.2
Msa0860900 AT3G59470.2 34.899 149 75 4 8 144 51 189 3.51e-17 83.2
Msa0860900 AT4G12850.1 35.185 108 60 1 39 136 2 109 1.84e-16 79.0
Msa0860900 AT4G12850.2 35.185 108 60 1 39 136 2 109 2.96e-16 77.0
Msa0860900 AT2G43280.1 36.607 112 57 1 41 138 15 126 6.75e-16 77.8
Msa0860900 AT3G07500.1 38.835 103 50 2 47 136 32 134 2.44e-15 76.6

Find 258 sgRNAs with CRISPR-Local

Find 477 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGATAATGCCCGGGTTTC+TGG 0.076489 5_4:-59981051 Msa0860900:CDS
CAATCTGGGTTGCTTGATTT+TGG 0.133503 5_4:-59985620 Msa0860900:five_prime_UTR
CCCAGTCCTTTGTAAGTTTC+AGG 0.139099 5_4:+59985011 None:intergenic
AGGACAGCTTACAGTCATTT+TGG 0.226964 5_4:-59984687 Msa0860900:CDS
ATGGGTTGCCTCACATTATA+AGG 0.229489 5_4:+59984855 None:intergenic
GATGGGGTGAATAGCATATT+TGG 0.271792 5_4:-59983877 Msa0860900:CDS
GATGATTCTGAGGCTTCTTT+TGG 0.273886 5_4:-59984546 Msa0860900:CDS
TTTCATAATCTTCTGATTGT+AGG 0.279900 5_4:+59985983 None:intergenic
ACTCATTGTAATTGATTGTT+TGG 0.290282 5_4:+59980187 None:intergenic
ACTTTCAACAACAGCAAATA+AGG 0.298234 5_4:-59982281 Msa0860900:CDS
TAGAGTTCATAGTGAAAATA+AGG 0.298312 5_4:+59984339 None:intergenic
CAACATTACCAATGTTCTTT+AGG 0.301189 5_4:-59984098 Msa0860900:CDS
ATCGTATGTCTAATGTGTTT+TGG 0.301976 5_4:-59984725 Msa0860900:CDS
TTAGGGAAGAGTTAGGGTTT+TGG 0.303992 5_4:+59986038 None:intergenic
CATAATGTGGATGCTGAATT+TGG 0.311841 5_4:-59985437 Msa0860900:CDS
TCAATTACAATGAGTAGAAA+TGG 0.315457 5_4:-59980179 Msa0860900:three_prime_UTR
TTAACCTCATATTCTGTTGA+TGG 0.333158 5_4:+59982367 None:intergenic
AGAGTCACTATATCCAAGTT+TGG 0.365829 5_4:-59980097 Msa0860900:three_prime_UTR
GTGTCTCGTCAGCGAGTTGA+TGG 0.365862 5_4:-59983166 Msa0860900:CDS
TTGTTTGATAGGAAAGGATT+TGG 0.371906 5_4:-59980231 Msa0860900:three_prime_UTR
GACGGTGTTAGGGAAGAGTT+AGG 0.383454 5_4:+59986031 None:intergenic
GAGGGATGCTCGGGACCTGC+TGG 0.384203 5_4:-59984814 Msa0860900:CDS
GGCGAAGGTGTCTTTAGAAC+TGG 0.389519 5_4:+59984003 None:intergenic
TCAACTCGCTGACGAGGCAC+TGG 0.390203 5_4:+59983235 None:intergenic
CAACTCGCTGACGAGGCATT+GGG 0.391167 5_4:+59983203 None:intergenic
GTTTATGCAGTGACGTGCTT+GGG 0.392754 5_4:+59984419 None:intergenic
CGTGCCACTGGGGTCGTTTG+TGG 0.394528 5_4:+59983280 None:intergenic
AGATCAGCCATTGGTTGAAC+AGG 0.395974 5_4:+59983310 None:intergenic
TACTCTGTTCTCTGGATTTG+AGG 0.396619 5_4:+59982647 None:intergenic
ACCTTCGCCAATGGAGAATC+AGG 0.397585 5_4:-59983989 Msa0860900:CDS
GTGCCATATGCTCCATTCAC+TGG 0.397710 5_4:-59984618 Msa0860900:CDS
AGTTGTTTCATTGTTTGTAA+TGG 0.398936 5_4:-59985504 Msa0860900:exon
CACGGTCAGTTTAATGCTGA+TGG 0.401096 5_4:-59985248 Msa0860900:CDS
TCATGCTGAGGGTATGGTTT+CGG 0.402062 5_4:-59985384 Msa0860900:CDS
AGCAAAAGGGTCAAAATAAG+TGG 0.402254 5_4:-59985139 Msa0860900:CDS
CAGCATATCTGATGGCTTCC+CGG 0.407610 5_4:+59983581 None:intergenic
CATCTCGCTGACGAGGCATT+GGG 0.408269 5_4:+59983104 None:intergenic
TTGCTCTATGTGTTGTGTCC+AGG 0.409123 5_4:+59984652 None:intergenic
CTGACAATAGTCAAAAGATT+AGG 0.415523 5_4:-59984935 Msa0860900:CDS
TGTATAGTGCTCGTGATCAA+TGG 0.420791 5_4:-59984215 Msa0860900:CDS
ATCCTCTTCGATTCTGTTGG+CGG 0.420813 5_4:+59983897 None:intergenic
AAGTTAAGTTTCAAGTATCC+AGG 0.425548 5_4:-59981020 Msa0860900:CDS
TCATCTTGCTGAAGAGGCGC+TGG 0.427906 5_4:+59983070 None:intergenic
GACATTAGGGAGGGATGCTC+GGG 0.428100 5_4:-59984823 Msa0860900:CDS
TGAAGTAGGGGTTCTCTTGT+CGG 0.428439 5_4:+59983414 None:intergenic
TCATCTCGCTGACGAGGCAT+TGG 0.429820 5_4:+59983103 None:intergenic
TATGCTAAATAAATTTAAAC+AGG 0.430381 5_4:-59979982 None:intergenic
TCAACTTGCTTACGTGCCAC+TGG 0.432157 5_4:+59983268 None:intergenic
ATGAACTCAGAGGGCATGAT+TGG 0.432731 5_4:-59984248 Msa0860900:CDS
ACTCCTCAATTGTTTCTGTC+AGG 0.433646 5_4:+59984304 None:intergenic
TGCCTGAAAACTCAAACATT+TGG 0.440083 5_4:+59983776 None:intergenic
ATGAACTAGCTCTGGAGAAA+TGG 0.440287 5_4:-59984071 Msa0860900:CDS
CTGATGGGACAAATATGTTC+CGG 0.441063 5_4:-59985232 Msa0860900:CDS
AAAGTTGCGAGGCGATGATT+AGG 0.441916 5_4:-59985166 Msa0860900:CDS
GGGGCAAAACGACGGTGTTA+GGG 0.442878 5_4:+59986021 None:intergenic
TCCGGGAGTTTGTGTGTAGC+AGG 0.444056 5_4:-59985214 Msa0860900:CDS
AGGTTAAGTTCCATCTCTCT+CGG 0.446028 5_4:-59982351 Msa0860900:CDS
AGAGTGTTGCATAGCATAGC+AGG 0.447327 5_4:+59986111 None:intergenic
GATGATTAGGATAGAGCAAA+AGG 0.447571 5_4:-59985153 Msa0860900:CDS
CACGGTATGCCAATCTGTGC+CGG 0.447645 5_4:-59983600 Msa0860900:CDS
AGGCAGAAGACTTGTTTGAT+AGG 0.447995 5_4:-59980242 Msa0860900:three_prime_UTR
TCAACTCGCTGACGAGGCAT+TGG 0.448513 5_4:+59983202 None:intergenic
TGATGGGACAAATATGTTCC+GGG 0.449990 5_4:-59985231 Msa0860900:CDS
ACGGTAGTTGTCACCAAACT+TGG 0.450400 5_4:+59980084 None:intergenic
TCAAGTATCCAGGGATGCAT+TGG 0.450589 5_4:-59981010 Msa0860900:CDS
CATCTTGCTGAAGAGGCGCT+GGG 0.450975 5_4:+59983071 None:intergenic
ACAAAATCATTTGACCATGA+TGG 0.454962 5_4:+59984589 None:intergenic
TGAAGTCTATGACTGAAGTC+GGG 0.455020 5_4:-59982309 Msa0860900:CDS
TTCTCTGGCGGTACCTGATA+AGG 0.456816 5_4:-59985084 Msa0860900:CDS
CCCATCCTCTTCGATTCTGT+TGG 0.457757 5_4:+59983894 None:intergenic
CGCTGACGAGGCACTGGGGA+TGG 0.458341 5_4:+59983241 None:intergenic
TGTCTCAGCTTGATAATGCC+CGG 0.459217 5_4:-59981059 Msa0860900:intron
CGCCTACGAGGCACTGGTCG+TGG 0.461327 5_4:+59983142 None:intergenic
GCAGGGAAGGTTTGAAAAGA+AGG 0.461483 5_4:-59985196 Msa0860900:CDS
TCTAAGTTTCATTTAATAGC+CGG 0.463354 5_4:-59980415 Msa0860900:three_prime_UTR
CACAGCACCCAATGCATCCC+TGG 0.463515 5_4:+59981002 None:intergenic
GAAGTCAATGACGTGGGTAA+TGG 0.464484 5_4:-59982679 Msa0860900:CDS
TCAACTCGCTGACGAGACAC+TGG 0.466795 5_4:+59983169 None:intergenic
TGCTCTATGTGTTGTGTCCA+GGG 0.469368 5_4:+59984653 None:intergenic
GTGCCTCGTAGGCGAGTTGA+TGG 0.469828 5_4:-59983133 Msa0860900:CDS
ACAACGGCTACTCTGTTCTC+TGG 0.470800 5_4:+59982639 None:intergenic
ATCCCAGTGAATGGAGCATA+TGG 0.472427 5_4:+59984615 None:intergenic
GAAGTAGGGGTTCTCTTGTC+GGG 0.472681 5_4:+59983415 None:intergenic
TCAAATACCATGCCCAAATA+CGG 0.473294 5_4:+59985344 None:intergenic
GGACTGGGGCTTGTTCCAAC+TGG 0.474446 5_4:-59984996 Msa0860900:CDS
GCCTGAAACTTACAAAGGAC+TGG 0.476526 5_4:-59985012 Msa0860900:CDS
AATTGATTGTTTGGAGCTGC+AGG 0.477791 5_4:+59980196 None:intergenic
GGGATCTCATGCTGAGGGTA+TGG 0.478915 5_4:-59985390 Msa0860900:CDS
GTCGATGTTTCATCGTTAAG+TGG 0.478980 5_4:+59983358 None:intergenic
GTATAGTGCTCGTGATCAAT+GGG 0.479907 5_4:-59984214 Msa0860900:CDS
CTTGTATCTGATGTTGAAGT+AGG 0.481986 5_4:+59983400 None:intergenic
CAACTAATCATCGACTCAGC+TGG 0.482359 5_4:-59983453 Msa0860900:CDS
CAAGTATCCAGGGATGCATT+GGG 0.482761 5_4:-59981009 Msa0860900:CDS
AGTGAGTATGCTAGACGGTC+GGG 0.482860 5_4:-59985293 Msa0860900:CDS
TTTGGTCAAGTTAATGATGC+TGG 0.483303 5_4:-59985419 Msa0860900:CDS
CAATTACAATGAGTAGAAAT+GGG 0.483874 5_4:-59980178 Msa0860900:three_prime_UTR
CGCTGACGAGGCATTGGGGA+TGG 0.486572 5_4:+59983109 None:intergenic
ATGATTAGTTGATGACACTT+TGG 0.490968 5_4:+59983465 None:intergenic
GAAGACTTGTTTGATAGGAA+AGG 0.492059 5_4:-59980237 Msa0860900:three_prime_UTR
ACACTAGAAAAGTGCTTCAC+TGG 0.492664 5_4:+59985047 None:intergenic
TCAGTCATAGACTTCAAAAC+AGG 0.492669 5_4:+59982316 None:intergenic
TTGAAGTCTATGACTGAAGT+CGG 0.493526 5_4:-59982310 Msa0860900:CDS
AGACATTAGGGAGGGATGCT+CGG 0.493941 5_4:-59984824 Msa0860900:CDS
TTGTATCTGATGTTGAAGTA+GGG 0.495979 5_4:+59983401 None:intergenic
TCTGGAGAAATGGTTTGAAA+AGG 0.496885 5_4:-59984061 Msa0860900:CDS
ACTTATGATGCTGCAATGAC+TGG 0.497681 5_4:-59983535 Msa0860900:CDS
CGCTGACGAGGCATTGGGGA+TGG 0.497742 5_4:+59983208 None:intergenic
CAACTTGCTTACGTGCCACT+GGG 0.498429 5_4:+59983269 None:intergenic
AAGCTCCGCCGTTGCAGAGT+CGG 0.499750 5_4:+59986067 None:intergenic
TCCTTTGTAAGTTTCAGGCA+TGG 0.500821 5_4:+59985016 None:intergenic
AGCTCAAAAGCTGGTTTGCA+CGG 0.501825 5_4:-59985266 Msa0860900:CDS
CACGTCATTGACTTCAAAGA+TGG 0.501878 5_4:+59982687 None:intergenic
GAGTCCATCAACAGAATATG+AGG 0.503904 5_4:-59982371 Msa0860900:CDS
GATGGCTTCCCGGCACAGAT+TGG 0.505149 5_4:+59983591 None:intergenic
TGTTTATGCAGTGACGTGCT+TGG 0.505307 5_4:+59984418 None:intergenic
AATGAATCACGGAAATATGC+TGG 0.507187 5_4:+59984189 None:intergenic
CGCTGACGAGACACTGGGGA+TGG 0.508209 5_4:+59983175 None:intergenic
GAAGGAACATAGCCATTCTC+TGG 0.512692 5_4:-59985099 Msa0860900:CDS
GTTAATGATGCTGGAAACTC+GGG 0.514570 5_4:-59985410 Msa0860900:CDS
AGTTAATGATGCTGGAAACT+CGG 0.515040 5_4:-59985411 Msa0860900:CDS
CTAAGTTTCATTTAATAGCC+GGG 0.516158 5_4:-59980414 Msa0860900:three_prime_UTR
ATGCCTCGTCAGCGAGATGA+TGG 0.517544 5_4:-59983100 Msa0860900:CDS
TTCGGAGCCGTATTTGGGCA+TGG 0.517562 5_4:-59985351 Msa0860900:CDS
TTTGGGCAGATGCAAGATCA+AGG 0.517733 5_4:-59984707 Msa0860900:CDS
TGTTTGGAGCTGCAGGGTAG+AGG 0.518228 5_4:+59980203 None:intergenic
CTTCAGACTCGCCAGAAACC+CGG 0.518277 5_4:+59981040 None:intergenic
TAGGCAGTATGAACTAGCTC+TGG 0.519286 5_4:-59984079 Msa0860900:CDS
CGTTAAGTGGCCATAAAAGA+GGG 0.519299 5_4:+59983371 None:intergenic
GATATATACATGACACCAGT+TGG 0.519725 5_4:+59984981 None:intergenic
GGGTGCTGTGCTACGATCAA+TGG 0.520286 5_4:-59980989 Msa0860900:CDS
TGATGGTTTATCCCAGTGAA+TGG 0.520311 5_4:+59984606 None:intergenic
CATCCCACTACATCTTAAAA+CGG 0.520600 5_4:-59983699 Msa0860900:CDS
CCTGAAACTTACAAAGGACT+GGG 0.522711 5_4:-59985011 Msa0860900:CDS
CAACTCGCTGACGAGGCACT+GGG 0.522831 5_4:+59983236 None:intergenic
TCGGGTTTCAGCTCAAAAGC+TGG 0.523459 5_4:-59985275 Msa0860900:CDS
AGGGGTTCTCTTGTCGGGAT+CGG 0.524735 5_4:+59983420 None:intergenic
GATGTTCATGTGATAACTAT+CGG 0.525824 5_4:-59985482 Msa0860900:CDS
TTAGCAACCTGATTCTCCAT+TGG 0.527218 5_4:+59983982 None:intergenic
TATCAGGTACCGCCAGAGAA+TGG 0.527369 5_4:+59985087 None:intergenic
TGTATTGCATAGAAGAAACC+AGG 0.531582 5_4:+59984762 None:intergenic
TGTAGGTGTGTGAACAATGC+GGG 0.533824 5_4:+59986000 None:intergenic
GCGCCTCTTCAGCAAGATGA+TGG 0.535172 5_4:-59983067 Msa0860900:CDS
ATAACTATCGGAGAAGGAAG+TGG 0.536867 5_4:-59985470 Msa0860900:CDS
TCTCTCTATAACTACCGATC+AGG 0.536976 5_4:-59984478 Msa0860900:CDS
AACACTCTCTCTCTTTCTCT+CGG 0.537236 5_4:-59986096 Msa0860900:five_prime_UTR
GTGAGTAATTAGTATTCATA+CGG 0.537548 5_4:+59980065 None:intergenic
GAGTTTGTGTGTAGCAGGGA+AGG 0.537943 5_4:-59985209 Msa0860900:CDS
TCGTTAAGTGGCCATAAAAG+AGG 0.538091 5_4:+59983370 None:intergenic
TCTTGCTGAAGAGGCGCTGG+GGG 0.539141 5_4:+59983073 None:intergenic
CCATCTCTCTCGGGTTACTG+TGG 0.539645 5_4:-59982341 Msa0860900:CDS
GGTTAAGTTCCATCTCTCTC+GGG 0.539950 5_4:-59982350 Msa0860900:CDS
TCAACTCGCCTACGAGGCAC+TGG 0.539984 5_4:+59983136 None:intergenic
AGTTAGCTCTCAATTCAGAC+TGG 0.540099 5_4:+59983806 None:intergenic
TGCCATATGCTCCATTCACT+GGG 0.541819 5_4:-59984617 Msa0860900:CDS
CCCTGCTACACACAAACTCC+CGG 0.542869 5_4:+59985213 None:intergenic
ACTCATATTTGATGATTCTG+AGG 0.543525 5_4:-59984556 Msa0860900:CDS
CATCTCTCTCGGGTTACTGT+GGG 0.544255 5_4:-59982340 Msa0860900:CDS
GGTAAATTCAGATCAGCCAT+TGG 0.544409 5_4:+59983301 None:intergenic
GTCTCAGCTTGATAATGCCC+GGG 0.544869 5_4:-59981058 Msa0860900:intron
CTTCTCCGACTCTGCAACGG+CGG 0.545429 5_4:-59986072 Msa0860900:five_prime_UTR
CGATGCTCCTGTTCAACCAA+TGG 0.548780 5_4:-59983317 Msa0860900:CDS
TAGTGAGTATGCTAGACGGT+CGG 0.552667 5_4:-59985294 Msa0860900:CDS
CTTTCATAAAATACTCCAGC+AGG 0.556028 5_4:+59984799 None:intergenic
GGACCATCATCTTGCTGAAG+AGG 0.556157 5_4:+59983064 None:intergenic
ACGGTATGCCAATCTGTGCC+GGG 0.557330 5_4:-59983599 Msa0860900:CDS
CAACTCGCTGACGAGACACT+GGG 0.557677 5_4:+59983170 None:intergenic
TTCAGACTCGCCAGAAACCC+GGG 0.560618 5_4:+59981041 None:intergenic
CAACAGAATCGAAGAGGATG+GGG 0.561342 5_4:-59983893 Msa0860900:CDS
ATCTTGCTGAAGAGGCGCTG+GGG 0.561388 5_4:+59983072 None:intergenic
CCAACAGAATCGAAGAGGAT+GGG 0.561771 5_4:-59983894 Msa0860900:CDS
AAGGATGCATGCGACATACA+TGG 0.563634 5_4:+59984358 None:intergenic
TCTAAAGACACCTTCGCCAA+TGG 0.564758 5_4:-59983998 Msa0860900:CDS
CATCTTAAAACGGTGGACAA+TGG 0.573595 5_4:-59983689 Msa0860900:CDS
CGGAGAAGGAAGTGGATCGA+TGG 0.574177 5_4:-59985462 Msa0860900:CDS
CCGGGAGTTTGTGTGTAGCA+GGG 0.574471 5_4:-59985213 Msa0860900:CDS
ACGGTGTTAGGGAAGAGTTA+GGG 0.575963 5_4:+59986032 None:intergenic
ACCTGATTCTCCATTGGCGA+AGG 0.577117 5_4:+59983988 None:intergenic
GGTTGTTACAAAATTTGTGA+AGG 0.577403 5_4:-59985117 Msa0860900:CDS
TGAGGAAGGTGCTGTAGCTA+TGG 0.578207 5_4:-59983560 Msa0860900:CDS
GCCAACAGAATCGAAGAGGA+TGG 0.578654 5_4:-59983895 Msa0860900:CDS
AAACGTTATGTCTTGCGAGA+AGG 0.580603 5_4:-59984396 Msa0860900:CDS
GCTGTAATATCTCCTACTCA+AGG 0.581429 5_4:-59984162 Msa0860900:CDS
CCACAGTAACCCGAGAGAGA+TGG 0.582321 5_4:+59982341 None:intergenic
GAGGCTTCAAATCCTTGAGT+AGG 0.582780 5_4:+59984150 None:intergenic
ACGGTCAGTTTAATGCTGAT+GGG 0.585310 5_4:-59985247 Msa0860900:CDS
TGTTTAAATTTATTTAGCAT+AGG 0.585498 5_4:+59979984 None:intergenic
ATGACTGGTCTTAGAGAAGG+TGG 0.586437 5_4:-59983520 Msa0860900:CDS
CATCTTTGAAGTCAATGACG+TGG 0.586514 5_4:-59982686 Msa0860900:CDS
GGTCTTCTCCGACTCTGCAA+CGG 0.588638 5_4:-59986075 Msa0860900:five_prime_UTR
TGTATCTGATGTTGAAGTAG+GGG 0.588892 5_4:+59983402 None:intergenic
GGTTGCTGTAATAAATCTCA+AGG 0.589532 5_4:-59982260 Msa0860900:intron
TCGTACATGTATCATATCGT+AGG 0.593956 5_4:-59980262 Msa0860900:three_prime_UTR
ACCTTCCTCAGCATATCTGA+TGG 0.598127 5_4:+59983573 None:intergenic
AACTCGGGATCTCATGCTGA+GGG 0.600343 5_4:-59985395 Msa0860900:CDS
CATATGAGTCTTTGACATCA+CGG 0.600661 5_4:-59983618 Msa0860900:CDS
AGTTAAGTTTCAAGTATCCA+GGG 0.603293 5_4:-59981019 Msa0860900:CDS
TTGATCACGAGCACTATACA+AGG 0.604276 5_4:+59984218 None:intergenic
GCCATCAGATATGCTGAGGA+AGG 0.604325 5_4:-59983574 Msa0860900:CDS
TGGATCGATGGAACATAATG+TGG 0.607966 5_4:-59985450 Msa0860900:CDS
GCAAAAGGGTCAAAATAAGT+GGG 0.609981 5_4:-59985138 Msa0860900:CDS
GGACTCTCAACTCGCTGACG+AGG 0.611590 5_4:+59983229 None:intergenic
TGATCGGTAGTTATAGAGAG+AGG 0.611883 5_4:+59984480 None:intergenic
TTGTATGCATCTGTCCTGAT+CGG 0.612352 5_4:+59984464 None:intergenic
TTCACTGGGATAAACCATCA+TGG 0.614596 5_4:-59984603 Msa0860900:CDS
TGAAATTGATTCAACACGTG+TGG 0.616172 5_4:-59985698 Msa0860900:five_prime_UTR
AGTAGCCGTTGTCAATCTCA+AGG 0.616717 5_4:-59982628 Msa0860900:intron
CATGTGATAACTATCGGAGA+AGG 0.618752 5_4:-59985476 Msa0860900:CDS
ATCTTTGAAGTCAATGACGT+GGG 0.619370 5_4:-59982685 Msa0860900:CDS
TCATACTGCCTAAAGAACAT+TGG 0.619859 5_4:+59984090 None:intergenic
TAGACAAATATGAACTCAGA+GGG 0.622079 5_4:-59984257 Msa0860900:CDS
TAACCTGACAGAAACAATTG+AGG 0.623748 5_4:-59984307 Msa0860900:CDS
GAAGTCTATGACTGAAGTCG+GGG 0.631820 5_4:-59982308 Msa0860900:CDS
GGACCATCATCTCGCTGACG+AGG 0.632084 5_4:+59983097 None:intergenic
ATGATTAGGATAGAGCAAAA+GGG 0.632703 5_4:-59985152 Msa0860900:CDS
GGACTATCAACTCGCTGACG+AGG 0.634516 5_4:+59983196 None:intergenic
GGATATACATGGTGGCACGT+TGG 0.635926 5_4:-59985599 Msa0860900:five_prime_UTR
TACCGCCAACAGAATCGAAG+AGG 0.639324 5_4:-59983899 Msa0860900:CDS
CACATTATAAGGCATCGAAG+TGG 0.639643 5_4:+59984866 None:intergenic
TTTATGCAGTGACGTGCTTG+GGG 0.640502 5_4:+59984420 None:intergenic
TCTGGCGGTACCTGATAAGG+TGG 0.640782 5_4:-59985081 Msa0860900:CDS
ATCTCGCTGACGAGGCATTG+GGG 0.645015 5_4:+59983105 None:intergenic
TGATGGTCCACCTGAAAACA+CGG 0.645985 5_4:-59983050 Msa0860900:intron
TAGTTATAGAGAGAGGGTGA+CGG 0.646341 5_4:+59984487 None:intergenic
ACATTGGTAATGTTGTATGC+CGG 0.647842 5_4:+59984106 None:intergenic
GCAATGACTGGTCTTAGAGA+AGG 0.648703 5_4:-59983523 Msa0860900:CDS
GTCCACGACCAGTGCCTCGT+AGG 0.650635 5_4:-59983144 Msa0860900:CDS
AAAGTGCAGGCTGAAAACCC+TGG 0.650722 5_4:-59984780 Msa0860900:CDS
CTTCGATGCCTTATAATGTG+AGG 0.651484 5_4:-59984863 Msa0860900:CDS
TTTATAGTGAGTATGCTAGA+CGG 0.652904 5_4:-59985298 Msa0860900:CDS
GATCGGTAGTTATAGAGAGA+GGG 0.656771 5_4:+59984481 None:intergenic
AACTCGCTGACGAGGCATTG+GGG 0.657743 5_4:+59983204 None:intergenic
GGAAGCCATCAGATATGCTG+AGG 0.662402 5_4:-59983578 Msa0860900:CDS
GTGTGGAGAGTAGAAAAGAG+TGG 0.662993 5_4:-59985681 Msa0860900:five_prime_UTR
GTATTGCATAGAAGAAACCA+GGG 0.664100 5_4:+59984763 None:intergenic
AAACTCGGGATCTCATGCTG+AGG 0.664329 5_4:-59985396 Msa0860900:CDS
TACATACTGACATAACCACC+CGG 0.669695 5_4:+59980396 None:intergenic
ACCATGCCTGAAACTTACAA+AGG 0.669726 5_4:-59985017 Msa0860900:CDS
CCCACTACATCTTAAAACGG+TGG 0.672135 5_4:-59983696 Msa0860900:CDS
AACTTGCTTACGTGCCACTG+GGG 0.680413 5_4:+59983270 None:intergenic
GGAACATAGCCATTCTCTGG+CGG 0.681713 5_4:-59985096 Msa0860900:CDS
AAGGATGACTGAAAGTTGCG+AGG 0.682372 5_4:-59985177 Msa0860900:CDS
ATTGATTGTTTGGAGCTGCA+GGG 0.684593 5_4:+59980197 None:intergenic
ATAGACAAATATGAACTCAG+AGG 0.685380 5_4:-59984258 Msa0860900:CDS
AGTATTGTATTGGACGAATG+TGG 0.693732 5_4:-59983655 Msa0860900:CDS
GGACCATCAACTCGCCTACG+AGG 0.699625 5_4:+59983130 None:intergenic
GTAGGTGTGTGAACAATGCG+GGG 0.700461 5_4:+59986001 None:intergenic
AACTCGCTGACGAGACACTG+GGG 0.704142 5_4:+59983171 None:intergenic
CAGCACAAGAAAGTTGCTCG+CGG 0.708596 5_4:+59980959 None:intergenic
TTGTAGGTGTGTGAACAATG+CGG 0.708846 5_4:+59985999 None:intergenic
AACTCGCTGACGAGGCACTG+GGG 0.710997 5_4:+59983237 None:intergenic
GTTAAGTGGCCATAAAAGAG+GGG 0.718319 5_4:+59983372 None:intergenic
ACATACCTTGAGATTGACAA+CGG 0.720523 5_4:+59982623 None:intergenic
AGTTTCATTTAATAGCCGGG+TGG 0.723218 5_4:-59980411 Msa0860900:three_prime_UTR
ATTGTATTGGACGAATGTGG+TGG 0.729466 5_4:-59983652 Msa0860900:CDS
CTGAAACTTACAAAGGACTG+GGG 0.731403 5_4:-59985010 Msa0860900:CDS
TATAGTGAATACATTAGACA+CGG 0.741062 5_4:+59983723 None:intergenic
TTTACCACAAACGACCCCAG+TGG 0.755041 5_4:-59983284 Msa0860900:CDS
TAGGTGTGTGAACAATGCGG+GGG 0.781624 5_4:+59986002 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATAATTTAAAATCAGTTT+TGG - chr5_4:59983537-59983556 Msa0860900:CDS 10.0%
!!! AAAGAATTAACATTTTAATT+TGG - chr5_4:59984341-59984360 Msa0860900:CDS 10.0%
!! ATTCAATAAAAAACAGTAAA+TGG + chr5_4:59980204-59980223 None:intergenic 15.0%
!! AATGTTATGTATTCAAATTT+GGG + chr5_4:59983350-59983369 None:intergenic 15.0%
!! TAATGTTATGTATTCAAATT+TGG + chr5_4:59983351-59983370 None:intergenic 15.0%
!! TATATTTAAAAGAAAGAATC+TGG - chr5_4:59984017-59984036 Msa0860900:CDS 15.0%
!! TAAGATGAATATATTTATAC+CGG - chr5_4:59984139-59984158 Msa0860900:CDS 15.0%
!! TATTTATCTATCATTTAATG+TGG - chr5_4:59984676-59984695 Msa0860900:CDS 15.0%
!! ATTTATCTATCATTTAATGT+GGG - chr5_4:59984677-59984696 Msa0860900:CDS 15.0%
!!! TGGTATTGTTATTATTATTA+TGG - chr5_4:59984910-59984929 Msa0860900:CDS 15.0%
!!! GGTATTGTTATTATTATTAT+GGG - chr5_4:59984911-59984930 Msa0860900:CDS 15.0%
!!! GTTATGAAAATTACTTTTTC+TGG - chr5_4:59980323-59980342 Msa0860900:three_prime_UTR 20.0%
!!! TTTTTCTGCATTTCATTATT+AGG - chr5_4:59980362-59980381 Msa0860900:three_prime_UTR 20.0%
!!! TTCATTATTAGGAATTTTCA+AGG - chr5_4:59980373-59980392 Msa0860900:three_prime_UTR 20.0%
!!! TGCTTTTTTATATATGTTCT+TGG - chr5_4:59983093-59983112 Msa0860900:CDS 20.0%
!!! GCTTTTTTATATATGTTCTT+GGG - chr5_4:59983094-59983113 Msa0860900:CDS 20.0%
!! ATGTTATGTATTCAAATTTG+GGG + chr5_4:59983349-59983368 None:intergenic 20.0%
!! ATTCTATTTGCAACAAAATA+TGG + chr5_4:59984370-59984389 None:intergenic 20.0%
!! TTTATCTATCATTTAATGTG+GGG - chr5_4:59984678-59984697 Msa0860900:CDS 20.0%
!!! TCTATTTGGTTATTTTATCA+AGG - chr5_4:59984702-59984721 Msa0860900:CDS 20.0%
!! TATTCTTTACTACTTCTATT+TGG + chr5_4:59984868-59984887 None:intergenic 20.0%
!! TAGAAGTAGTAAAGAATAAA+AGG - chr5_4:59984870-59984889 Msa0860900:CDS 20.0%
!! AGGAAATGTAAAGAAAATAA+TGG - chr5_4:59984890-59984909 Msa0860900:CDS 20.0%
!! TATTATTATGGGAGAAATAA+TGG - chr5_4:59984922-59984941 Msa0860900:CDS 20.0%
!!! ATTAAACTAAGTTGAATTGT+AGG + chr5_4:59985536-59985555 None:intergenic 20.0%
!! TACTAATTACTCACAAAAAA+TGG - chr5_4:59986038-59986057 Msa0860900:five_prime_UTR 20.0%
!! ACTAATTACTCACAAAAAAT+GGG - chr5_4:59986039-59986058 Msa0860900:five_prime_UTR 20.0%
! TTTCATAATCTTCTGATTGT+AGG + chr5_4:59980114-59980133 None:intergenic 25.0%
!! AATTTTCATTACTGTAAGTC+AGG - chr5_4:59980136-59980155 Msa0860900:three_prime_UTR 25.0%
!! ATTTTCATTACTGTAAGTCA+GGG - chr5_4:59980137-59980156 Msa0860900:three_prime_UTR 25.0%
! TAGAAATTGAAATGGGAAAT+TGG + chr5_4:59980166-59980185 None:intergenic 25.0%
! TTGAGTGTAGAAATTGAAAT+GGG + chr5_4:59980173-59980192 None:intergenic 25.0%
! ATTGAGTGTAGAAATTGAAA+TGG + chr5_4:59980174-59980193 None:intergenic 25.0%
!! TATTTTGTCCTTTTGTGAAA+TGG - chr5_4:59980233-59980252 Msa0860900:three_prime_UTR 25.0%
!! ATTTTGTCCTTTTGTGAAAT+GGG - chr5_4:59980234-59980253 Msa0860900:three_prime_UTR 25.0%
!!! TGGATTTTTTGTTGTAGTTT+TGG - chr5_4:59980433-59980452 Msa0860900:exon 25.0%
!!! GGATTTTTTGTTGTAGTTTT+GGG - chr5_4:59980434-59980453 Msa0860900:exon 25.0%
!! TGTGATAATTTTCACAATCT+GGG - chr5_4:59980460-59980479 Msa0860900:CDS 25.0%
!! CATGCAATTTTCTATTTGAT+TGG - chr5_4:59980532-59980551 Msa0860900:intron 25.0%
!! AGTTGTTTCATTGTTTGTAA+TGG - chr5_4:59980590-59980609 Msa0860900:intron 25.0%
!! CCTAATGTCTTCTTTTTAAT+GGG + chr5_4:59981260-59981279 None:intergenic 25.0%
! CCATTAAAAAGAAGACATTA+GGG - chr5_4:59981258-59981277 Msa0860900:intron 25.0%
! TAGAGTTCATAGTGAAAATA+AGG + chr5_4:59981758-59981777 None:intergenic 25.0%
! TATAGTGAATACATTAGACA+CGG + chr5_4:59982374-59982393 None:intergenic 25.0%
! AGCAAAAAACAGTATTGTAT+TGG - chr5_4:59982429-59982448 Msa0860900:intron 25.0%
! TTTATATATGTTCTTGGGAT+TGG - chr5_4:59983099-59983118 Msa0860900:CDS 25.0%
!!! ATTTTAACAAAGTAACAGTG+AGG - chr5_4:59983651-59983670 Msa0860900:CDS 25.0%
! TTCAACACATTATTAATAGC+CGG + chr5_4:59984161-59984180 None:intergenic 25.0%
! CTTATATTATAAGTTCAGGT+TGG + chr5_4:59984269-59984288 None:intergenic 25.0%
! GTTGCTTATATTATAAGTTC+AGG + chr5_4:59984273-59984292 None:intergenic 25.0%
! ATAATATAAGCAACACACAA+AGG - chr5_4:59984279-59984298 Msa0860900:CDS 25.0%
! TGTTGCAAATAGAATATTTG+TGG - chr5_4:59984375-59984394 Msa0860900:CDS 25.0%
! ATAACCAAACAAGAGAAAAT+GGG + chr5_4:59984539-59984558 None:intergenic 25.0%
! ACTTGAGATAAAATTGAATG+TGG + chr5_4:59984603-59984622 None:intergenic 25.0%
!!! TTCAATTTTATCTCAAGTTG+AGG - chr5_4:59984605-59984624 Msa0860900:CDS 25.0%
! TTATCTATCATTTAATGTGG+GGG - chr5_4:59984679-59984698 Msa0860900:CDS 25.0%
!! AATTTTCTCCTTTGCTTATT+TGG + chr5_4:59984779-59984798 None:intergenic 25.0%
!!! AGTTTTGTCTGTTGTTTATA+TGG + chr5_4:59984826-59984845 None:intergenic 25.0%
! GATACACATATTTAGGTAAT+AGG + chr5_4:59985168-59985187 None:intergenic 25.0%
!!! TTTTTTTTTTTTCCTTGCCA+TGG - chr5_4:59985339-59985358 Msa0860900:CDS 25.0%
! ATTAATATACACAGAGAAAG+AGG + chr5_4:59985583-59985602 None:intergenic 25.0%
! TCTAAGTTTCATTTAATAGC+CGG - chr5_4:59985679-59985698 Msa0860900:five_prime_UTR 25.0%
!! ACAAATTTTTGTAGAGAAAG+AGG + chr5_4:59985800-59985819 None:intergenic 25.0%
! ACTCATTGTAATTGATTGTT+TGG + chr5_4:59985910-59985929 None:intergenic 25.0%
! TCAATTACAATGAGTAGAAA+TGG - chr5_4:59985915-59985934 Msa0860900:intron 25.0%
! CAATTACAATGAGTAGAAAT+GGG - chr5_4:59985916-59985935 Msa0860900:intron 25.0%
! GTGAGTAATTAGTATTCATA+CGG + chr5_4:59986032-59986051 None:intergenic 25.0%
ATCAAAACCCATTTCACAAA+AGG + chr5_4:59980244-59980263 None:intergenic 30.0%
! GTGTGATAATTTTCACAATC+TGG - chr5_4:59980459-59980478 Msa0860900:CDS 30.0%
! TGCTTGATTTTGGATATACA+TGG - chr5_4:59980484-59980503 Msa0860900:intron 30.0%
! TTGATTTTGGATATACATGG+TGG - chr5_4:59980487-59980506 Msa0860900:intron 30.0%
GATGTTCATGTGATAACTAT+CGG - chr5_4:59980612-59980631 Msa0860900:intron 30.0%
TTTATAGTGAGTATGCTAGA+CGG - chr5_4:59980796-59980815 Msa0860900:intron 30.0%
ATGATTAGGATAGAGCAAAA+GGG - chr5_4:59980942-59980961 Msa0860900:intron 30.0%
GGTTGTTACAAAATTTGTGA+AGG - chr5_4:59980977-59980996 Msa0860900:CDS 30.0%
!! AATCTTTTGACTATTGTCAG+AGG + chr5_4:59981159-59981178 None:intergenic 30.0%
CTGACAATAGTCAAAAGATT+AGG - chr5_4:59981159-59981178 Msa0860900:intron 30.0%
! ATCGAAGTGGAATTTTTAAC+TGG + chr5_4:59981218-59981237 None:intergenic 30.0%
CCCATTAAAAAGAAGACATT+AGG - chr5_4:59981257-59981276 Msa0860900:intron 30.0%
! CCCTAATGTCTTCTTTTTAA+TGG + chr5_4:59981261-59981280 None:intergenic 30.0%
TTAAAAAGAAGACATTAGGG+AGG - chr5_4:59981261-59981280 Msa0860900:intron 30.0%
TAAAAAGAAGACATTAGGGA+GGG - chr5_4:59981262-59981281 Msa0860900:intron 30.0%
! ATCGTATGTCTAATGTGTTT+TGG - chr5_4:59981369-59981388 Msa0860900:intron 30.0%
! TCGTATGTCTAATGTGTTTT+GGG - chr5_4:59981370-59981389 Msa0860900:intron 30.0%
ACAAAATCATTTGACCATGA+TGG + chr5_4:59981508-59981527 None:intergenic 30.0%
! CATGGTCAAATGATTTTGTT+TGG - chr5_4:59981509-59981528 Msa0860900:intron 30.0%
! ACTCATATTTGATGATTCTG+AGG - chr5_4:59981538-59981557 Msa0860900:intron 30.0%
!! TTGAGGAGTTTGATTTTTCT+TGG - chr5_4:59981804-59981823 Msa0860900:intron 30.0%
ATAGACAAATATGAACTCAG+AGG - chr5_4:59981836-59981855 Msa0860900:intron 30.0%
TAGACAAATATGAACTCAGA+GGG - chr5_4:59981837-59981856 Msa0860900:intron 30.0%
TTACAGCGAAAAATGAATCA+CGG + chr5_4:59981919-59981938 None:intergenic 30.0%
CAACATTACCAATGTTCTTT+AGG - chr5_4:59981996-59982015 Msa0860900:intron 30.0%
!! ATGATTAGTTGATGACACTT+TGG + chr5_4:59982632-59982651 None:intergenic 30.0%
TTGTATCTGATGTTGAAGTA+GGG + chr5_4:59982696-59982715 None:intergenic 30.0%
TGGAATAGAATGCATAATGT+TGG - chr5_4:59983119-59983138 Msa0860900:CDS 30.0%
CTTGAGAAGAGTTTATAAAG+AGG - chr5_4:59983278-59983297 Msa0860900:CDS 30.0%
CAATCTCAACATCAAAAAAC+TGG - chr5_4:59983500-59983519 Msa0860900:CDS 30.0%
AAGTGCACTAACACTAAAAA+AGG + chr5_4:59983611-59983630 None:intergenic 30.0%
TTAACCTCATATTCTGTTGA+TGG + chr5_4:59983730-59983749 None:intergenic 30.0%
ACTTTCAACAACAGCAAATA+AGG - chr5_4:59983813-59983832 Msa0860900:CDS 30.0%
TCATTATTCTCTAATATGCC+CGG - chr5_4:59983879-59983898 Msa0860900:CDS 30.0%
! AACAGAACATAACTAGTCTA+TGG - chr5_4:59984086-59984105 Msa0860900:CDS 30.0%
AATGTGGACTTGTAATATCA+GGG - chr5_4:59984193-59984212 Msa0860900:CDS 30.0%
TGACTTCAATATCTTGCAAT+TGG - chr5_4:59984237-59984256 Msa0860900:CDS 30.0%
TGTAAGACCTAATAATTGCT+AGG - chr5_4:59984466-59984485 Msa0860900:CDS 30.0%
ATACAGACCTAGCAATTATT+AGG + chr5_4:59984476-59984495 None:intergenic 30.0%
CATAACCAAACAAGAGAAAA+TGG + chr5_4:59984540-59984559 None:intergenic 30.0%
!! CATTTTCTCTTGTTTGGTTA+TGG - chr5_4:59984538-59984557 Msa0860900:CDS 30.0%
TCTTTACTACTTCTATTTGG+AGG + chr5_4:59984865-59984884 None:intergenic 30.0%
! AAGTTAAGTTTCAAGTATCC+AGG - chr5_4:59985074-59985093 Msa0860900:CDS 30.0%
! AGTTAAGTTTCAAGTATCCA+GGG - chr5_4:59985075-59985094 Msa0860900:CDS 30.0%
GATGGATGATACACATATTT+AGG + chr5_4:59985175-59985194 None:intergenic 30.0%
!! AATTGATTTGTATGCGATGA+TGG + chr5_4:59985193-59985212 None:intergenic 30.0%
!! TCTAGCCTAGATTTTAACAT+GGG + chr5_4:59985426-59985445 None:intergenic 30.0%
CTAAGTTTCATTTAATAGCC+GGG - chr5_4:59985680-59985699 Msa0860900:five_prime_UTR 30.0%
! GTCAGTATGTATCATTTTGA+TGG - chr5_4:59985710-59985729 Msa0860900:five_prime_UTR 30.0%
TTGTTTGATAGGAAAGGATT+TGG - chr5_4:59985863-59985882 Msa0860900:intron 30.0%
! TATACTTTCTTTTCTCTCTC+TGG + chr5_4:59985955-59985974 None:intergenic 30.0%
! TGAAATTGATTCAACACGTG+TGG - chr5_4:59980396-59980415 Msa0860900:three_prime_UTR 35.0%
CATAATGTGGATGCTGAATT+TGG - chr5_4:59980657-59980676 Msa0860900:intron 35.0%
TTTGGTCAAGTTAATGATGC+TGG - chr5_4:59980675-59980694 Msa0860900:intron 35.0%
AGTTAATGATGCTGGAAACT+CGG - chr5_4:59980683-59980702 Msa0860900:intron 35.0%
AAATACGGCTCCGAAAAATA+TGG + chr5_4:59980738-59980757 None:intergenic 35.0%
!! ATATTTTTCGGAGCCGTATT+TGG - chr5_4:59980737-59980756 Msa0860900:intron 35.0%
!! TATTTTTCGGAGCCGTATTT+GGG - chr5_4:59980738-59980757 Msa0860900:intron 35.0%
TCAAATACCATGCCCAAATA+CGG + chr5_4:59980753-59980772 None:intergenic 35.0%
GATGATTAGGATAGAGCAAA+AGG - chr5_4:59980941-59980960 Msa0860900:intron 35.0%
AGCAAAAGGGTCAAAATAAG+TGG - chr5_4:59980955-59980974 Msa0860900:intron 35.0%
GCAAAAGGGTCAAAATAAGT+GGG - chr5_4:59980956-59980975 Msa0860900:intron 35.0%
! TGAAGTTTTTCCACCTTATC+AGG + chr5_4:59981026-59981045 None:intergenic 35.0%
GATATATACATGACACCAGT+TGG + chr5_4:59981116-59981135 None:intergenic 35.0%
CTTTCATAAAATACTCCAGC+AGG + chr5_4:59981298-59981317 None:intergenic 35.0%
!! GGAGTATTTTATGAAAGTGC+AGG - chr5_4:59981301-59981320 Msa0860900:intron 35.0%
GTATTGCATAGAAGAAACCA+GGG + chr5_4:59981334-59981353 None:intergenic 35.0%
TGTATTGCATAGAAGAAACC+AGG + chr5_4:59981335-59981354 None:intergenic 35.0%
TAACCTGACAGAAACAATTG+AGG - chr5_4:59981787-59981806 Msa0860900:intron 35.0%
AATGAATCACGGAAATATGC+TGG + chr5_4:59981908-59981927 None:intergenic 35.0%
!!! AGGATTTGAAGCCTCTTTTT+TGG - chr5_4:59981952-59981971 Msa0860900:intron 35.0%
!!! TTTGAAGCCTCTTTTTTGGA+CGG - chr5_4:59981956-59981975 Msa0860900:intron 35.0%
!! ACATTGGTAATGTTGTATGC+CGG + chr5_4:59981991-59982010 None:intergenic 35.0%
TCATACTGCCTAAAGAACAT+TGG + chr5_4:59982007-59982026 None:intergenic 35.0%
TCTGGAGAAATGGTTTGAAA+AGG - chr5_4:59982033-59982052 Msa0860900:intron 35.0%
!! TGCCAAATGTTTGAGTTTTC+AGG - chr5_4:59982316-59982335 Msa0860900:CDS 35.0%
TGCCTGAAAACTCAAACATT+TGG + chr5_4:59982321-59982340 None:intergenic 35.0%
!! AGTTTTCAGGCATTCTTTGT+AGG - chr5_4:59982329-59982348 Msa0860900:CDS 35.0%
CATCCCACTACATCTTAAAA+CGG - chr5_4:59982395-59982414 Msa0860900:intron 35.0%
AGTATTGTATTGGACGAATG+TGG - chr5_4:59982439-59982458 Msa0860900:intron 35.0%
CATATGAGTCTTTGACATCA+CGG - chr5_4:59982476-59982495 Msa0860900:intron 35.0%
TGTATCTGATGTTGAAGTAG+GGG + chr5_4:59982695-59982714 None:intergenic 35.0%
CTTGTATCTGATGTTGAAGT+AGG + chr5_4:59982697-59982716 None:intergenic 35.0%
CAAACCAAAGGTTGCAATTT+AGG + chr5_4:59983179-59983198 None:intergenic 35.0%
! TTCCAACACCTTCATTTTGT+TGG - chr5_4:59983212-59983231 Msa0860900:CDS 35.0%
!!! CTTCATTTTGTTGGCTTTGA+GGG - chr5_4:59983221-59983240 Msa0860900:CDS 35.0%
!!! TTCATTTTGTTGGCTTTGAG+GGG - chr5_4:59983222-59983241 Msa0860900:CDS 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - chr5_4:59983281-59983300 Msa0860900:CDS 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr5_4:59983325-59983344 None:intergenic 35.0%
CACCTACATGACAGAATAAA+CGG + chr5_4:59983381-59983400 None:intergenic 35.0%
!! ATCTTTGAAGTCAATGACGT+GGG - chr5_4:59983409-59983428 Msa0860900:CDS 35.0%
ACATACCTTGAGATTGACAA+CGG + chr5_4:59983474-59983493 None:intergenic 35.0%
CAACATCAAAAAACTGGTAG+TGG - chr5_4:59983506-59983525 Msa0860900:CDS 35.0%
CTAACACTAAAAAAGGACCA+TGG + chr5_4:59983604-59983623 None:intergenic 35.0%
CTTTGTTAAAATGATGCGAC+AGG + chr5_4:59983643-59983662 None:intergenic 35.0%
TCAGTCATAGACTTCAAAAC+AGG + chr5_4:59983781-59983800 None:intergenic 35.0%
TTGAAGTCTATGACTGAAGT+CGG - chr5_4:59983784-59983803 Msa0860900:CDS 35.0%
GGTTGCTGTAATAAATCTCA+AGG - chr5_4:59983834-59983853 Msa0860900:CDS 35.0%
TTGCTCTGTTATTCTAGTAC+TGG - chr5_4:59983915-59983934 Msa0860900:CDS 35.0%
ATGCAATTGTCTTCGTACTA+AGG - chr5_4:59983956-59983975 Msa0860900:CDS 35.0%
TGCAATTGTCTTCGTACTAA+GGG - chr5_4:59983957-59983976 Msa0860900:CDS 35.0%
TAAGGGGATGTAAAGCAAAA+AGG - chr5_4:59983974-59983993 Msa0860900:CDS 35.0%
AAGGGGATGTAAAGCAAAAA+GGG - chr5_4:59983975-59983994 Msa0860900:CDS 35.0%
! TAACTAGTCTATGGTCTTTG+AGG - chr5_4:59984095-59984114 Msa0860900:CDS 35.0%
GAATGTGGACTTGTAATATC+AGG - chr5_4:59984192-59984211 Msa0860900:CDS 35.0%
! TATCGATGTCTAAGATGCTT+TGG - chr5_4:59984416-59984435 Msa0860900:CDS 35.0%
!! TAGAAGGAACTAAGTTGATG+TGG - chr5_4:59984574-59984593 Msa0860900:CDS 35.0%
!! AGAAGGAACTAAGTTGATGT+GGG - chr5_4:59984575-59984594 Msa0860900:CDS 35.0%
ATTTAATGTGGGGGTCTATT+TGG - chr5_4:59984688-59984707 Msa0860900:CDS 35.0%
TTCTCCTTTGCTTATTTGGT+CGG + chr5_4:59984775-59984794 None:intergenic 35.0%
TGGCTTTCTTGTAACATAGT+TGG + chr5_4:59985232-59985251 None:intergenic 35.0%
!! CTCTAGCCTAGATTTTAACA+TGG + chr5_4:59985427-59985446 None:intergenic 35.0%
! TTTGCATGCAAAATTTTCGC+AGG - chr5_4:59985608-59985627 Msa0860900:five_prime_UTR 35.0%
! TTGCATGCAAAATTTTCGCA+GGG - chr5_4:59985609-59985628 Msa0860900:five_prime_UTR 35.0%
TCGTACATGTATCATATCGT+AGG - chr5_4:59985832-59985851 Msa0860900:intron 35.0%
! GAAGACTTGTTTGATAGGAA+AGG - chr5_4:59985857-59985876 Msa0860900:intron 35.0%
AGAGTCACTATATCCAAGTT+TGG - chr5_4:59985997-59986016 Msa0860900:five_prime_UTR 35.0%
AACACTCTCTCTCTTTCTCT+CGG - chr5_4:59979998-59980017 Msa0860900:three_prime_UTR 40.0%
! TTAGGGAAGAGTTAGGGTTT+TGG + chr5_4:59980059-59980078 None:intergenic 40.0%
TTGTAGGTGTGTGAACAATG+CGG + chr5_4:59980098-59980117 None:intergenic 40.0%
! CAATCTGGGTTGCTTGATTT+TGG - chr5_4:59980474-59980493 Msa0860900:intron 40.0%
CATGTGATAACTATCGGAGA+AGG - chr5_4:59980618-59980637 Msa0860900:intron 40.0%
ATAACTATCGGAGAAGGAAG+TGG - chr5_4:59980624-59980643 Msa0860900:intron 40.0%
TGGATCGATGGAACATAATG+TGG - chr5_4:59980644-59980663 Msa0860900:intron 40.0%
GTTAATGATGCTGGAAACTC+GGG - chr5_4:59980684-59980703 Msa0860900:intron 40.0%
! GGTTTCGGAGCCATATTTTT+CGG - chr5_4:59980725-59980744 Msa0860900:intron 40.0%
ACGGTCAGTTTAATGCTGAT+GGG - chr5_4:59980847-59980866 Msa0860900:intron 40.0%
CTGATGGGACAAATATGTTC+CGG - chr5_4:59980862-59980881 Msa0860900:intron 40.0%
TGATGGGACAAATATGTTCC+GGG - chr5_4:59980863-59980882 Msa0860900:intron 40.0%
!! ACACTAGAAAAGTGCTTCAC+TGG + chr5_4:59981050-59981069 None:intergenic 40.0%
!! GTGAAGCACTTTTCTAGTGT+TGG - chr5_4:59981050-59981069 Msa0860900:CDS 40.0%
ACCATGCCTGAAACTTACAA+AGG - chr5_4:59981077-59981096 Msa0860900:intron 40.0%
TCCTTTGTAAGTTTCAGGCA+TGG + chr5_4:59981081-59981100 None:intergenic 40.0%
CCTGAAACTTACAAAGGACT+GGG - chr5_4:59981083-59981102 Msa0860900:intron 40.0%
CTGAAACTTACAAAGGACTG+GGG - chr5_4:59981084-59981103 Msa0860900:intron 40.0%
!! AACTGGATGACTCGTTTTTG+CGG + chr5_4:59981201-59981220 None:intergenic 40.0%
!! CACATTATAAGGCATCGAAG+TGG + chr5_4:59981231-59981250 None:intergenic 40.0%
CTTCGATGCCTTATAATGTG+AGG - chr5_4:59981231-59981250 Msa0860900:intron 40.0%
! ATGGGTTGCCTCACATTATA+AGG + chr5_4:59981242-59981261 None:intergenic 40.0%
! AGGACAGCTTACAGTCATTT+TGG - chr5_4:59981407-59981426 Msa0860900:intron 40.0%
TGATGGTTTATCCCAGTGAA+TGG + chr5_4:59981491-59981510 None:intergenic 40.0%
TTCACTGGGATAAACCATCA+TGG - chr5_4:59981491-59981510 Msa0860900:intron 40.0%
!!! GATGATTCTGAGGCTTCTTT+TGG - chr5_4:59981548-59981567 Msa0860900:intron 40.0%
!!! ATTCTGAGGCTTCTTTTGGT+TGG - chr5_4:59981552-59981571 Msa0860900:intron 40.0%
TAGTTATAGAGAGAGGGTGA+CGG + chr5_4:59981610-59981629 None:intergenic 40.0%
GATCGGTAGTTATAGAGAGA+GGG + chr5_4:59981616-59981635 None:intergenic 40.0%
TGATCGGTAGTTATAGAGAG+AGG + chr5_4:59981617-59981636 None:intergenic 40.0%
TCTCTCTATAACTACCGATC+AGG - chr5_4:59981616-59981635 Msa0860900:intron 40.0%
TTGTATGCATCTGTCCTGAT+CGG + chr5_4:59981633-59981652 None:intergenic 40.0%
AAACGTTATGTCTTGCGAGA+AGG - chr5_4:59981698-59981717 Msa0860900:intron 40.0%
! ATACATGGCCCAATTTTTCG+TGG + chr5_4:59981724-59981743 None:intergenic 40.0%
!! ACTCCTCAATTGTTTCTGTC+AGG + chr5_4:59981793-59981812 None:intergenic 40.0%
TTGATCACGAGCACTATACA+AGG + chr5_4:59981879-59981898 None:intergenic 40.0%
TGTATAGTGCTCGTGATCAA+TGG - chr5_4:59981879-59981898 Msa0860900:intron 40.0%
GTATAGTGCTCGTGATCAAT+GGG - chr5_4:59981880-59981899 Msa0860900:intron 40.0%
GCTGTAATATCTCCTACTCA+AGG - chr5_4:59981932-59981951 Msa0860900:intron 40.0%
!! ATGAACTAGCTCTGGAGAAA+TGG - chr5_4:59982023-59982042 Msa0860900:intron 40.0%
TTAGCAACCTGATTCTCCAT+TGG + chr5_4:59982115-59982134 None:intergenic 40.0%
GATGGGGTGAATAGCATATT+TGG - chr5_4:59982217-59982236 Msa0860900:intron 40.0%
! AGTTAGCTCTCAATTCAGAC+TGG + chr5_4:59982291-59982310 None:intergenic 40.0%
!!! CGTTTTAAGATGTAGTGGGA+TGG + chr5_4:59982397-59982416 None:intergenic 40.0%
!!! CCACCGTTTTAAGATGTAGT+GGG + chr5_4:59982401-59982420 None:intergenic 40.0%
!!! TCCACCGTTTTAAGATGTAG+TGG + chr5_4:59982402-59982421 None:intergenic 40.0%
CATCTTAAAACGGTGGACAA+TGG - chr5_4:59982405-59982424 Msa0860900:intron 40.0%
ATTGTATTGGACGAATGTGG+TGG - chr5_4:59982442-59982461 Msa0860900:intron 40.0%
ACTTATGATGCTGCAATGAC+TGG - chr5_4:59982559-59982578 Msa0860900:intron 40.0%
! CAAGTACAACCCCTCTTTTA+TGG - chr5_4:59982713-59982732 Msa0860900:intron 40.0%
GTTAAGTGGCCATAAAAGAG+GGG + chr5_4:59982725-59982744 None:intergenic 40.0%
CGTTAAGTGGCCATAAAAGA+GGG + chr5_4:59982726-59982745 None:intergenic 40.0%
TCGTTAAGTGGCCATAAAAG+AGG + chr5_4:59982727-59982746 None:intergenic 40.0%
GTCGATGTTTCATCGTTAAG+TGG + chr5_4:59982739-59982758 None:intergenic 40.0%
GGTAAATTCAGATCAGCCAT+TGG + chr5_4:59982796-59982815 None:intergenic 40.0%
TGGAAATTCCGCCTTTATTG+CGG - chr5_4:59983139-59983158 Msa0860900:CDS 40.0%
! AGCCAACAAAATGAAGGTGT+TGG + chr5_4:59983217-59983236 None:intergenic 40.0%
CCTCAAAGCCAACAAAATGA+AGG + chr5_4:59983223-59983242 None:intergenic 40.0%
!!! CCTTCATTTTGTTGGCTTTG+AGG - chr5_4:59983220-59983239 Msa0860900:CDS 40.0%
!!! TCATTTTGTTGGCTTTGAGG+GGG - chr5_4:59983223-59983242 Msa0860900:CDS 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr5_4:59983323-59983342 Msa0860900:CDS 40.0%
ACATGACAGAATAAACGGAC+TGG + chr5_4:59983376-59983395 None:intergenic 40.0%
GTCCGTTTATTCTGTCATGT+AGG - chr5_4:59983376-59983395 Msa0860900:CDS 40.0%
CGTTTATTCTGTCATGTAGG+TGG - chr5_4:59983379-59983398 Msa0860900:CDS 40.0%
!! CACGTCATTGACTTCAAAGA+TGG + chr5_4:59983410-59983429 None:intergenic 40.0%
!! CATCTTTGAAGTCAATGACG+TGG - chr5_4:59983408-59983427 Msa0860900:CDS 40.0%
TACTCTGTTCTCTGGATTTG+AGG + chr5_4:59983450-59983469 None:intergenic 40.0%
GAGTTTCTCAAGTGAAACAC+AGG + chr5_4:59983566-59983585 None:intergenic 40.0%
GAGTCCATCAACAGAATATG+AGG - chr5_4:59983723-59983742 Msa0860900:CDS 40.0%
AGGTTAAGTTCCATCTCTCT+CGG - chr5_4:59983743-59983762 Msa0860900:CDS 40.0%
TGAAGTCTATGACTGAAGTC+GGG - chr5_4:59983785-59983804 Msa0860900:CDS 40.0%
AGCAACAAAGCATATGAACC+GGG + chr5_4:59983900-59983919 None:intergenic 40.0%
GAGCAACAAAGCATATGAAC+CGG + chr5_4:59983901-59983920 None:intergenic 40.0%
GCAATTGTCTTCGTACTAAG+GGG - chr5_4:59983958-59983977 Msa0860900:CDS 40.0%
GGACTTGTAATATCAGGGAA+AGG - chr5_4:59984198-59984217 Msa0860900:CDS 40.0%
!! TCAGGGAAAGGCATTAAACT+TGG - chr5_4:59984210-59984229 Msa0860900:CDS 40.0%
CTTTCAGTCTTGAGATGCAA+AGG + chr5_4:59984325-59984344 None:intergenic 40.0%
! TGTCTAAGATGCTTTGGTTG+CGG - chr5_4:59984422-59984441 Msa0860900:CDS 40.0%
ACAAGAGAAAATGGGAGACA+TGG + chr5_4:59984531-59984550 None:intergenic 40.0%
! GTCTCCCATTTTCTCTTGTT+TGG - chr5_4:59984532-59984551 Msa0860900:CDS 40.0%
TGGAGAGAATATAGCGTAGA+AGG - chr5_4:59984558-59984577 Msa0860900:CDS 40.0%
!! GAAGGAACTAAGTTGATGTG+GGG - chr5_4:59984576-59984595 Msa0860900:CDS 40.0%
!! AAGGAACTAAGTTGATGTGG+GGG - chr5_4:59984577-59984596 Msa0860900:CDS 40.0%
ATTTGGTCGGATGGAAAAGT+GGG + chr5_4:59984762-59984781 None:intergenic 40.0%
TATTTGGTCGGATGGAAAAG+TGG + chr5_4:59984763-59984782 None:intergenic 40.0%
ATGGATAGACAGAGAGAAAG+AGG + chr5_4:59984807-59984826 None:intergenic 40.0%
TACTACTTCTATTTGGAGGC+TGG + chr5_4:59984861-59984880 None:intergenic 40.0%
TCCAGAGATGGAAAACTAGT+TGG + chr5_4:59985252-59985271 None:intergenic 40.0%
!!! AACTAGTTTTCCATCTCTGG+AGG - chr5_4:59985251-59985270 Msa0860900:CDS 40.0%
CTAATCTGAGCTAAGGGTTA+AGG + chr5_4:59985386-59985405 None:intergenic 40.0%
GCTCAACTAATCTGAGCTAA+GGG + chr5_4:59985392-59985411 None:intergenic 40.0%
AGCTCAACTAATCTGAGCTA+AGG + chr5_4:59985393-59985412 None:intergenic 40.0%
!! GATTTTAACATGGGTGGGTT+GGG + chr5_4:59985417-59985436 None:intergenic 40.0%
!! AGATTTTAACATGGGTGGGT+TGG + chr5_4:59985418-59985437 None:intergenic 40.0%
ACCCACCCATGTTAAAATCT+AGG - chr5_4:59985418-59985437 Msa0860900:CDS 40.0%
!! GCCTAGATTTTAACATGGGT+GGG + chr5_4:59985422-59985441 None:intergenic 40.0%
!! AGCCTAGATTTTAACATGGG+TGG + chr5_4:59985423-59985442 None:intergenic 40.0%
!!! TTTCGACGCTTTTTTGACAC+AGG + chr5_4:59985651-59985670 None:intergenic 40.0%
AGTTTCATTTAATAGCCGGG+TGG - chr5_4:59985683-59985702 Msa0860900:five_prime_UTR 40.0%
TACATACTGACATAACCACC+CGG + chr5_4:59985701-59985720 None:intergenic 40.0%
!! GTATCATTTTGATGGCTGTG+TGG - chr5_4:59985718-59985737 Msa0860900:intron 40.0%
! AGGCAGAAGACTTGTTTGAT+AGG - chr5_4:59985852-59985871 Msa0860900:intron 40.0%
! ATTGATTGTTTGGAGCTGCA+GGG + chr5_4:59985900-59985919 None:intergenic 40.0%
! AATTGATTGTTTGGAGCTGC+AGG + chr5_4:59985901-59985920 None:intergenic 40.0%
! ACGGTGTTAGGGAAGAGTTA+GGG + chr5_4:59980065-59980084 None:intergenic 45.0%
TGTAGGTGTGTGAACAATGC+GGG + chr5_4:59980097-59980116 None:intergenic 45.0%
GTGTGGAGAGTAGAAAAGAG+TGG - chr5_4:59980413-59980432 Msa0860900:three_prime_UTR 45.0%
! TCATGCTGAGGGTATGGTTT+CGG - chr5_4:59980710-59980729 Msa0860900:intron 45.0%
TAGTGAGTATGCTAGACGGT+CGG - chr5_4:59980800-59980819 Msa0860900:intron 45.0%
!! AGCTCAAAAGCTGGTTTGCA+CGG - chr5_4:59980828-59980847 Msa0860900:intron 45.0%
CACGGTCAGTTTAATGCTGA+TGG - chr5_4:59980846-59980865 Msa0860900:intron 45.0%
GCAGGGAAGGTTTGAAAAGA+AGG - chr5_4:59980898-59980917 Msa0860900:intron 45.0%
AAGGATGACTGAAAGTTGCG+AGG - chr5_4:59980917-59980936 Msa0860900:intron 45.0%
AAAGTTGCGAGGCGATGATT+AGG - chr5_4:59980928-59980947 Msa0860900:intron 45.0%
GAAGGAACATAGCCATTCTC+TGG - chr5_4:59980995-59981014 Msa0860900:CDS 45.0%
GCCTGAAACTTACAAAGGAC+TGG - chr5_4:59981082-59981101 Msa0860900:intron 45.0%
CCCAGTCCTTTGTAAGTTTC+AGG + chr5_4:59981086-59981105 None:intergenic 45.0%
TTTGGGCAGATGCAAGATCA+AGG - chr5_4:59981387-59981406 Msa0860900:intron 45.0%
!!! TTTTGGTGATGCAGTTACCC+TGG - chr5_4:59981424-59981443 Msa0860900:intron 45.0%
TGCTCTATGTGTTGTGTCCA+GGG + chr5_4:59981444-59981463 None:intergenic 45.0%
TTGCTCTATGTGTTGTGTCC+AGG + chr5_4:59981445-59981464 None:intergenic 45.0%
TGCCATATGCTCCATTCACT+GGG - chr5_4:59981477-59981496 Msa0860900:intron 45.0%
ATCCCAGTGAATGGAGCATA+TGG + chr5_4:59981482-59981501 None:intergenic 45.0%
TTTATGCAGTGACGTGCTTG+GGG + chr5_4:59981677-59981696 None:intergenic 45.0%
GTTTATGCAGTGACGTGCTT+GGG + chr5_4:59981678-59981697 None:intergenic 45.0%
TGTTTATGCAGTGACGTGCT+TGG + chr5_4:59981679-59981698 None:intergenic 45.0%
CGAGAAGGCCACGAAAAATT+GGG - chr5_4:59981713-59981732 Msa0860900:intron 45.0%
AAGGATGCATGCGACATACA+TGG + chr5_4:59981739-59981758 None:intergenic 45.0%
! ATGAACTCAGAGGGCATGAT+TGG - chr5_4:59981846-59981865 Msa0860900:intron 45.0%
GAGGCTTCAAATCCTTGAGT+AGG + chr5_4:59981947-59981966 None:intergenic 45.0%
TAGGCAGTATGAACTAGCTC+TGG - chr5_4:59982015-59982034 Msa0860900:intron 45.0%
TCTAAAGACACCTTCGCCAA+TGG - chr5_4:59982096-59982115 Msa0860900:intron 45.0%
ATCCTCTTCGATTCTGTTGG+CGG + chr5_4:59982200-59982219 None:intergenic 45.0%
CCAACAGAATCGAAGAGGAT+GGG - chr5_4:59982200-59982219 Msa0860900:intron 45.0%
CAACAGAATCGAAGAGGATG+GGG - chr5_4:59982201-59982220 Msa0860900:intron 45.0%
CCCACTACATCTTAAAACGG+TGG - chr5_4:59982398-59982417 Msa0860900:intron 45.0%
ACCTTCCTCAGCATATCTGA+TGG + chr5_4:59982524-59982543 None:intergenic 45.0%
!! GCAATGACTGGTCTTAGAGA+AGG - chr5_4:59982571-59982590 Msa0860900:intron 45.0%
!! ATGACTGGTCTTAGAGAAGG+TGG - chr5_4:59982574-59982593 Msa0860900:intron 45.0%
!! CAACTAATCATCGACTCAGC+TGG - chr5_4:59982641-59982660 Msa0860900:CDS 45.0%
TGAAGTAGGGGTTCTCTTGT+CGG + chr5_4:59982683-59982702 None:intergenic 45.0%
! AGATCAGCCATTGGTTGAAC+AGG + chr5_4:59982787-59982806 None:intergenic 45.0%
TGATGGTCCACCTGAAAACA+CGG - chr5_4:59983044-59983063 Msa0860900:intron 45.0%
! TCTTGCCATACCGTGTTTTC+AGG + chr5_4:59983057-59983076 None:intergenic 45.0%
GTTGCAATTTAGGCGACTAG+GGG + chr5_4:59983169-59983188 None:intergenic 45.0%
GGTTGCAATTTAGGCGACTA+GGG + chr5_4:59983170-59983189 None:intergenic 45.0%
AGGTTGCAATTTAGGCGACT+AGG + chr5_4:59983171-59983190 None:intergenic 45.0%
GTCGCCTAAATTGCAACCTT+TGG - chr5_4:59983172-59983191 Msa0860900:CDS 45.0%
CTGCAATGAAGGCAAACCAA+AGG + chr5_4:59983191-59983210 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr5_4:59983316-59983335 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr5_4:59983313-59983332 Msa0860900:CDS 45.0%
GAAGTCAATGACGTGGGTAA+TGG - chr5_4:59983415-59983434 Msa0860900:CDS 45.0%
AGTAGCCGTTGTCAATCTCA+AGG - chr5_4:59983466-59983485 Msa0860900:CDS 45.0%
CTTGAGAAACTCCTGCCATT+CGG - chr5_4:59983574-59983593 Msa0860900:CDS 45.0%
GGTTAAGTTCCATCTCTCTC+GGG - chr5_4:59983744-59983763 Msa0860900:CDS 45.0%
GAAGTCTATGACTGAAGTCG+GGG - chr5_4:59983786-59983805 Msa0860900:CDS 45.0%
GGGATGTAAAGCAAAAAGGG+TGG - chr5_4:59983978-59983997 Msa0860900:CDS 45.0%
AAGAAAGAATCTGGCTGTCG+AGG - chr5_4:59984026-59984045 Msa0860900:CDS 45.0%
!! TAGTCTATGGTCTTTGAGGC+TGG - chr5_4:59984099-59984118 Msa0860900:CDS 45.0%
TGAAGATGCTGTCGAGAATG+TGG - chr5_4:59984177-59984196 Msa0860900:CDS 45.0%
! GTCTAAGATGCTTTGGTTGC+GGG - chr5_4:59984423-59984442 Msa0860900:CDS 45.0%
TTTGGTCGGATGGAAAAGTG+GGG + chr5_4:59984761-59984780 None:intergenic 45.0%
CCTTTGCTTATTTGGTCGGA+TGG + chr5_4:59984771-59984790 None:intergenic 45.0%
CCATCCGACCAAATAAGCAA+AGG - chr5_4:59984768-59984787 Msa0860900:CDS 45.0%
!! TGTCTCAGCTTGATAATGCC+CGG - chr5_4:59985035-59985054 Msa0860900:CDS 45.0%
TCAAGTATCCAGGGATGCAT+TGG - chr5_4:59985084-59985103 Msa0860900:CDS 45.0%
CAAGTATCCAGGGATGCATT+GGG - chr5_4:59985085-59985104 Msa0860900:CDS 45.0%
!!! GCCAACTAGTTTTCCATCTC+TGG - chr5_4:59985248-59985267 Msa0860900:CDS 45.0%
GATTATTACGCCTCCAGAGA+TGG + chr5_4:59985264-59985283 None:intergenic 45.0%
AGCTAAGGGTTAAGGAGTTG+AGG + chr5_4:59985378-59985397 None:intergenic 45.0%
!! TCATTTTGATGGCTGTGTGG+TGG - chr5_4:59985721-59985740 Msa0860900:intron 45.0%
ACGGTAGTTGTCACCAAACT+TGG + chr5_4:59986013-59986032 None:intergenic 45.0%
! GACGGTGTTAGGGAAGAGTT+AGG + chr5_4:59980066-59980085 None:intergenic 50.0%
TAGGTGTGTGAACAATGCGG+GGG + chr5_4:59980095-59980114 None:intergenic 50.0%
GTAGGTGTGTGAACAATGCG+GGG + chr5_4:59980096-59980115 None:intergenic 50.0%
GGATATACATGGTGGCACGT+TGG - chr5_4:59980495-59980514 Msa0860900:intron 50.0%
AAACTCGGGATCTCATGCTG+AGG - chr5_4:59980698-59980717 Msa0860900:intron 50.0%
AACTCGGGATCTCATGCTGA+GGG - chr5_4:59980699-59980718 Msa0860900:intron 50.0%
AGTGAGTATGCTAGACGGTC+GGG - chr5_4:59980801-59980820 Msa0860900:intron 50.0%
TCGGGTTTCAGCTCAAAAGC+TGG - chr5_4:59980819-59980838 Msa0860900:intron 50.0%
GAGTTTGTGTGTAGCAGGGA+AGG - chr5_4:59980885-59980904 Msa0860900:intron 50.0%
GGAACATAGCCATTCTCTGG+CGG - chr5_4:59980998-59981017 Msa0860900:CDS 50.0%
! TATCAGGTACCGCCAGAGAA+TGG + chr5_4:59981010-59981029 None:intergenic 50.0%
TTCTCTGGCGGTACCTGATA+AGG - chr5_4:59981010-59981029 Msa0860900:CDS 50.0%
AGACATTAGGGAGGGATGCT+CGG - chr5_4:59981270-59981289 Msa0860900:intron 50.0%
AAAGTGCAGGCTGAAAACCC+TGG - chr5_4:59981314-59981333 Msa0860900:intron 50.0%
GTGCCATATGCTCCATTCAC+TGG - chr5_4:59981476-59981495 Msa0860900:intron 50.0%
GCGAGAAGGCCACGAAAAAT+TGG - chr5_4:59981712-59981731 Msa0860900:intron 50.0%
GACAACGCCGTCCAAAAAAG+AGG + chr5_4:59981966-59981985 None:intergenic 50.0%
! TTTTGGACGGCGTTGTCAAC+CGG - chr5_4:59981969-59981988 Msa0860900:intron 50.0%
!! GGCGAAGGTGTCTTTAGAAC+TGG + chr5_4:59982094-59982113 None:intergenic 50.0%
ACCTTCGCCAATGGAGAATC+AGG - chr5_4:59982105-59982124 Msa0860900:intron 50.0%
ACCTGATTCTCCATTGGCGA+AGG + chr5_4:59982109-59982128 None:intergenic 50.0%
TACCGCCAACAGAATCGAAG+AGG - chr5_4:59982195-59982214 Msa0860900:intron 50.0%
GCCAACAGAATCGAAGAGGA+TGG - chr5_4:59982199-59982218 Msa0860900:intron 50.0%
CCCATCCTCTTCGATTCTGT+TGG + chr5_4:59982203-59982222 None:intergenic 50.0%
CAGCATATCTGATGGCTTCC+CGG + chr5_4:59982516-59982535 None:intergenic 50.0%
GGAAGCCATCAGATATGCTG+AGG - chr5_4:59982516-59982535 Msa0860900:intron 50.0%
GCCATCAGATATGCTGAGGA+AGG - chr5_4:59982520-59982539 Msa0860900:intron 50.0%
!! TGAGGAAGGTGCTGTAGCTA+TGG - chr5_4:59982534-59982553 Msa0860900:intron 50.0%
GAAGTAGGGGTTCTCTTGTC+GGG + chr5_4:59982682-59982701 None:intergenic 50.0%
CGATGCTCCTGTTCAACCAA+TGG - chr5_4:59982777-59982796 Msa0860900:intron 50.0%
TTTACCACAAACGACCCCAG+TGG - chr5_4:59982810-59982829 Msa0860900:intron 50.0%
! AACTTGCTTACGTGCCACTG+GGG + chr5_4:59982827-59982846 None:intergenic 50.0%
! CAACTTGCTTACGTGCCACT+GGG + chr5_4:59982828-59982847 None:intergenic 50.0%
! TCAACTTGCTTACGTGCCAC+TGG + chr5_4:59982829-59982848 None:intergenic 50.0%
GGACCATCATCTTGCTGAAG+AGG + chr5_4:59983033-59983052 None:intergenic 50.0%
GTCCACCTGAAAACACGGTA+TGG - chr5_4:59983049-59983068 Msa0860900:intron 50.0%
!! TGCCATACCGTGTTTTCAGG+TGG + chr5_4:59983054-59983073 None:intergenic 50.0%
! GGTGTTGGAAGCTGCAATGA+AGG + chr5_4:59983202-59983221 None:intergenic 50.0%
!!! TTTTGTTGGCTTTGAGGGGG+TGG - chr5_4:59983226-59983245 Msa0860900:CDS 50.0%
! GGGTGGATTTAGTCCCACAT+CGG - chr5_4:59983243-59983262 Msa0860900:CDS 50.0%
GAGTGCTATCTGTCCGATGT+GGG + chr5_4:59983259-59983278 None:intergenic 50.0%
! AGAGTGCTATCTGTCCGATG+TGG + chr5_4:59983260-59983279 None:intergenic 50.0%
GCACTTCTCACCTTACAAGC+CGG - chr5_4:59983303-59983322 Msa0860900:CDS 50.0%
ACAACGGCTACTCTGTTCTC+TGG + chr5_4:59983458-59983477 None:intergenic 50.0%
AAGGACCATGGTCAACCGAA+TGG + chr5_4:59983592-59983611 None:intergenic 50.0%
CATCTCTCTCGGGTTACTGT+GGG - chr5_4:59983754-59983773 Msa0860900:CDS 50.0%
!! TCTATGGTCTTTGAGGCTGG+TGG - chr5_4:59984102-59984121 Msa0860900:CDS 50.0%
!! GTCTCAGCTTGATAATGCCC+GGG - chr5_4:59985036-59985055 Msa0860900:CDS 50.0%
!! CTTGATAATGCCCGGGTTTC+TGG - chr5_4:59985043-59985062 Msa0860900:CDS 50.0%
CAGCACAAGAAAGTTGCTCG+CGG + chr5_4:59985138-59985157 None:intergenic 50.0%
GGTTAAGGAGTTGAGGTCCA+GGG + chr5_4:59985371-59985390 None:intergenic 50.0%
GGTCTTCTCCGACTCTGCAA+CGG - chr5_4:59980019-59980038 Msa0860900:three_prime_UTR 55.0%
! GGGGCAAAACGACGGTGTTA+GGG + chr5_4:59980076-59980095 None:intergenic 55.0%
ACAATGCGGGGGCAAAACGA+CGG + chr5_4:59980084-59980103 None:intergenic 55.0%
CGGAGAAGGAAGTGGATCGA+TGG - chr5_4:59980632-59980651 Msa0860900:intron 55.0%
GGGATCTCATGCTGAGGGTA+TGG - chr5_4:59980704-59980723 Msa0860900:intron 55.0%
TTCGGAGCCGTATTTGGGCA+TGG - chr5_4:59980743-59980762 Msa0860900:intron 55.0%
TCCGGGAGTTTGTGTGTAGC+AGG - chr5_4:59980880-59980899 Msa0860900:intron 55.0%
CCCTGCTACACACAAACTCC+CGG + chr5_4:59980884-59980903 None:intergenic 55.0%
CCGGGAGTTTGTGTGTAGCA+GGG - chr5_4:59980881-59980900 Msa0860900:intron 55.0%
TCTGGCGGTACCTGATAAGG+TGG - chr5_4:59981013-59981032 Msa0860900:CDS 55.0%
GACATTAGGGAGGGATGCTC+GGG - chr5_4:59981271-59981290 Msa0860900:intron 55.0%
CACGGTATGCCAATCTGTGC+CGG - chr5_4:59982494-59982513 Msa0860900:intron 55.0%
ACGGTATGCCAATCTGTGCC+GGG - chr5_4:59982495-59982514 Msa0860900:intron 55.0%
AGGGGTTCTCTTGTCGGGAT+CGG + chr5_4:59982677-59982696 None:intergenic 55.0%
!! AACTCGCTGACGAGGCATTG+GGG + chr5_4:59982893-59982912 None:intergenic 55.0%
! CAACTCGCTGACGAGGCATT+GGG + chr5_4:59982894-59982913 None:intergenic 55.0%
TCAACTCGCTGACGAGGCAT+TGG + chr5_4:59982895-59982914 None:intergenic 55.0%
GGACTATCAACTCGCTGACG+AGG + chr5_4:59982901-59982920 None:intergenic 55.0%
AACTCGCTGACGAGACACTG+GGG + chr5_4:59982926-59982945 None:intergenic 55.0%
CAACTCGCTGACGAGACACT+GGG + chr5_4:59982927-59982946 None:intergenic 55.0%
TCAACTCGCTGACGAGACAC+TGG + chr5_4:59982928-59982947 None:intergenic 55.0%
! GTGTCTCGTCAGCGAGTTGA+TGG - chr5_4:59982928-59982947 Msa0860900:intron 55.0%
!! ATCTCGCTGACGAGGCATTG+GGG + chr5_4:59982992-59983011 None:intergenic 55.0%
! CATCTCGCTGACGAGGCATT+GGG + chr5_4:59982993-59983012 None:intergenic 55.0%
TCATCTCGCTGACGAGGCAT+TGG + chr5_4:59982994-59983013 None:intergenic 55.0%
ATGCCTCGTCAGCGAGATGA+TGG - chr5_4:59982994-59983013 Msa0860900:intron 55.0%
!! ATCTTGCTGAAGAGGCGCTG+GGG + chr5_4:59983025-59983044 None:intergenic 55.0%
!! CATCTTGCTGAAGAGGCGCT+GGG + chr5_4:59983026-59983045 None:intergenic 55.0%
! TCATCTTGCTGAAGAGGCGC+TGG + chr5_4:59983027-59983046 None:intergenic 55.0%
GCGCCTCTTCAGCAAGATGA+TGG - chr5_4:59983027-59983046 Msa0860900:intron 55.0%
CTAGGGGCAGACCGCAATAA+AGG + chr5_4:59983153-59983172 None:intergenic 55.0%
TCCTGCCATTCGGTTGACCA+TGG - chr5_4:59983584-59983603 Msa0860900:CDS 55.0%
ACCATGGTCAACCGAATGGC+AGG + chr5_4:59983588-59983607 None:intergenic 55.0%
CCACAGTAACCCGAGAGAGA+TGG + chr5_4:59983756-59983775 None:intergenic 55.0%
CCATCTCTCTCGGGTTACTG+TGG - chr5_4:59983753-59983772 Msa0860900:CDS 55.0%
!! GTCTTTGAGGCTGGTGGCAT+AGG - chr5_4:59984108-59984127 Msa0860900:CDS 55.0%
TTCAGACTCGCCAGAAACCC+GGG + chr5_4:59985056-59985075 None:intergenic 55.0%
CTTCAGACTCGCCAGAAACC+CGG + chr5_4:59985057-59985076 None:intergenic 55.0%
! GGGTGCTGTGCTACGATCAA+TGG - chr5_4:59985105-59985124 Msa0860900:CDS 55.0%
CCAGGGTTCAAACCATGGCA+AGG + chr5_4:59985354-59985373 None:intergenic 55.0%
CCTTGCCATGGTTTGAACCC+TGG - chr5_4:59985351-59985370 Msa0860900:CDS 55.0%
GAGGTCCAGGGTTCAAACCA+TGG + chr5_4:59985359-59985378 None:intergenic 55.0%
GGGTTAAGGAGTTGAGGTCC+AGG + chr5_4:59985372-59985391 None:intergenic 55.0%
! TGTTTGGAGCTGCAGGGTAG+AGG + chr5_4:59985894-59985913 None:intergenic 55.0%
CTTCTCCGACTCTGCAACGG+CGG - chr5_4:59980022-59980041 Msa0860900:three_prime_UTR 60.0%
AAGCTCCGCCGTTGCAGAGT+CGG + chr5_4:59980030-59980049 None:intergenic 60.0%
GGGGGCAAAACGACGGTGTT+AGG + chr5_4:59980077-59980096 None:intergenic 60.0%
! GGACTGGGGCTTGTTCCAAC+TGG - chr5_4:59981098-59981117 Msa0860900:intron 60.0%
!! CTCGTTTTTGCGGCAGCTGC+AGG + chr5_4:59981191-59981210 None:intergenic 60.0%
GATGGCTTCCCGGCACAGAT+TGG + chr5_4:59982506-59982525 None:intergenic 60.0%
!! AACTCGCTGACGAGGCACTG+GGG + chr5_4:59982860-59982879 None:intergenic 60.0%
! CAACTCGCTGACGAGGCACT+GGG + chr5_4:59982861-59982880 None:intergenic 60.0%
TCAACTCGCTGACGAGGCAC+TGG + chr5_4:59982862-59982881 None:intergenic 60.0%
GGACTCTCAACTCGCTGACG+AGG + chr5_4:59982868-59982887 None:intergenic 60.0%
TCAACTCGCCTACGAGGCAC+TGG + chr5_4:59982961-59982980 None:intergenic 60.0%
! GTGCCTCGTAGGCGAGTTGA+TGG - chr5_4:59982961-59982980 Msa0860900:intron 60.0%
GGACCATCAACTCGCCTACG+AGG + chr5_4:59982967-59982986 None:intergenic 60.0%
GGACCATCATCTCGCTGACG+AGG + chr5_4:59983000-59983019 None:intergenic 60.0%
!! TCTTGCTGAAGAGGCGCTGG+GGG + chr5_4:59983024-59983043 None:intergenic 60.0%
GGGGCAGACCGCAATAAAGG+CGG + chr5_4:59983150-59983169 None:intergenic 60.0%
CACAGCACCCAATGCATCCC+TGG + chr5_4:59985095-59985114 None:intergenic 60.0%
! CGTGCCACTGGGGTCGTTTG+TGG + chr5_4:59982817-59982836 None:intergenic 65.0%
!! CGCTGACGAGGCATTGGGGA+TGG + chr5_4:59982889-59982908 None:intergenic 65.0%
CGCTGACGAGACACTGGGGA+TGG + chr5_4:59982922-59982941 None:intergenic 65.0%
GTCCACGACCAGTGCCTCGT+AGG - chr5_4:59982950-59982969 Msa0860900:intron 65.0%
!! CGCTGACGAGGCATTGGGGA+TGG + chr5_4:59982889-59982908 None:intergenic 65.0%
GAGGGATGCTCGGGACCTGC+TGG - chr5_4:59981280-59981299 Msa0860900:intron 70.0%
!! CGCTGACGAGGCACTGGGGA+TGG + chr5_4:59982856-59982875 None:intergenic 70.0%
!! CGCCTACGAGGCACTGGTCG+TGG + chr5_4:59982955-59982974 None:intergenic 70.0%
!! TGCTGAAGAGGCGCTGGGGG+CGG + chr5_4:59983021-59983040 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 59979985 59986131 59979985 ID=Msa0860900;Name=Msa0860900
chr5_4 mRNA 59979985 59986131 59979985 ID=Msa0860900-mRNA-1;Parent=Msa0860900;Name=Msa0860900-mRNA-1;_AED=0.02;_eAED=0.02;_QI=389|1|1|1|0.8|0.66|6|457|951
chr5_4 exon 59979985 59980486 59979985 ID=Msa0860900-mRNA-1:exon:18495;Parent=Msa0860900-mRNA-1
chr5_4 exon 59980960 59981073 59980960 ID=Msa0860900-mRNA-1:exon:18494;Parent=Msa0860900-mRNA-1
chr5_4 exon 59982261 59982410 59982261 ID=Msa0860900-mRNA-1:exon:18493;Parent=Msa0860900-mRNA-1
chr5_4 exon 59982629 59982718 59982629 ID=Msa0860900-mRNA-1:exon:18492;Parent=Msa0860900-mRNA-1
chr5_4 exon 59983051 59985732 59983051 ID=Msa0860900-mRNA-1:exon:18491;Parent=Msa0860900-mRNA-1
chr5_4 exon 59985968 59986131 59985968 ID=Msa0860900-mRNA-1:exon:18490;Parent=Msa0860900-mRNA-1
chr5_4 five_prime_UTR 59985968 59986131 59985968 ID=Msa0860900-mRNA-1:five_prime_utr;Parent=Msa0860900-mRNA-1
chr5_4 five_prime_UTR 59985508 59985732 59985508 ID=Msa0860900-mRNA-1:five_prime_utr;Parent=Msa0860900-mRNA-1
chr5_4 CDS 59983051 59985507 59983051 ID=Msa0860900-mRNA-1:cds;Parent=Msa0860900-mRNA-1
chr5_4 CDS 59982629 59982718 59982629 ID=Msa0860900-mRNA-1:cds;Parent=Msa0860900-mRNA-1
chr5_4 CDS 59982261 59982410 59982261 ID=Msa0860900-mRNA-1:cds;Parent=Msa0860900-mRNA-1
chr5_4 CDS 59980960 59981073 59980960 ID=Msa0860900-mRNA-1:cds;Parent=Msa0860900-mRNA-1
chr5_4 CDS 59980442 59980486 59980442 ID=Msa0860900-mRNA-1:cds;Parent=Msa0860900-mRNA-1
chr5_4 three_prime_UTR 59979985 59980441 59979985 ID=Msa0860900-mRNA-1:three_prime_utr;Parent=Msa0860900-mRNA-1
Gene Sequence

>Msa0860900

ATGGATGTTCATGTGATAACTATCGGAGAAGGAAGTGGATCGATGGAACATAATGTGGATGCTGAATTTGGTCAAGTTAATGATGCTGGAAACTCGGGATCTCATGCTGAGGGTATGGTTTCGGAGCCATATTTTTCGGAGCCGTATTTGGGCATGGTATTTGATTCTGAAGATTCTGCTAAAAGTTTTTATAGTGAGTATGCTAGACGGTCGGGTTTCAGCTCAAAAGCTGGTTTGCACGGTCAGTTTAATGCTGATGGGACAAATATGTTCCGGGAGTTTGTGTGTAGCAGGGAAGGTTTGAAAAGAAGGATGACTGAAAGTTGCGAGGCGATGATTAGGATAGAGCAAAAGGGTCAAAATAAGTGGGTTGTTACAAAATTTGTGAAGGAACATAGCCATTCTCTGGCGGTACCTGATAAGGTGGAAAAACTTCAACCAGTGAAGCACTTTTCTAGTGTTGGAAGAACCATGCCTGAAACTTACAAAGGACTGGGGCTTGTTCCAACTGGTGTCATGTATATATCTATTGATGCGCATCACGTTTCCTCTGACAATAGTCAAAAGATTAGGAATTCTCCTGCAGCTGCCGCAAAAACGAGTCATCCAGTTAAAAATTCCACTTCGATGCCTTATAATGTGAGGCAACCCATTAAAAAGAAGACATTAGGGAGGGATGCTCGGGACCTGCTGGAGTATTTTATGAAAGTGCAGGCTGAAAACCCTGGTTTCTTCTATGCAATACAACTTGATGAAGAAAATCGTATGTCTAATGTGTTTTGGGCAGATGCAAGATCAAGGACAGCTTACAGTCATTTTGGTGATGCAGTTACCCTGGACACAACACATAGAGCAAATCAATATAATGTGCCATATGCTCCATTCACTGGGATAAACCATCATGGTCAAATGATTTTGTTTGGTTGTGCACTCATATTTGATGATTCTGAGGCTTCTTTTGGTTGGCTCTTCAAGACATTTCTAGCAGCTATGAATGACCGTCACCCTCTCTCTATAACTACCGATCAGGACAGATGCATACAAACAGCAGTATCACAAGTTTTTCCCCAAGCACGTCACTGCATAAACAAACGTTATGTCTTGCGAGAAGGCCACGAAAAATTGGGCCATGTATGTCGCATGCATCCTTATTTTCACTATGAACTCTATAATTGCATTAACCTGACAGAAACAATTGAGGAGTTTGATTTTTCTTGGAATTCTATCATAGACAAATATGAACTCAGAGGGCATGATTGGCTTCAGTCCTTGTATAGTGCTCGTGATCAATGGGTTCCAGCATATTTCCGTGATTCATTTTTCGCTGTAATATCTCCTACTCAAGGATTTGAAGCCTCTTTTTTGGACGGCGTTGTCAACCGGCATACAACATTACCAATGTTCTTTAGGCAGTATGAACTAGCTCTGGAGAAATGGTTTGAAAAGGAAATAGAATCAGATTTTGAGACAATTAGCACTAATCCAGTTCTAAAGACACCTTCGCCAATGGAGAATCAGGTTGCTAAGCTTTATACACAGAGAATATTTTTGAAGTTTCAAGAAGAGCTAGTTGAAACTTTTGCTTATACCGCCAACAGAATCGAAGAGGATGGGGTGAATAGCATATTTGGAGTTGCAAAGTTTGATGATGTCGAAAAGTCGTACACTGTCACATTAAACCAGTCTGAATTGAGAGCTAACTGTACATGCCAAATGTTTGAGTTTTCAGGCATTCTTTGTAGGCACATTTTAACTGTTTTTACCGTGTCTAATGTATTCACTATACCATCCCACTACATCTTAAAACGGTGGACAATGGAAGCAAAAAACAGTATTGTATTGGACGAATGTGGTGGTGAATCACTTGCATATGAGTCTTTGACATCACGGTATGCCAATCTGTGCCGGGAAGCCATCAGATATGCTGAGGAAGGTGCTGTAGCTATGGAAACTTATGATGCTGCAATGACTGGTCTTAGAGAAGGTGGAAAGAAAGTTGATGTCATGAAGAGAAATATTGCCAAAGTGTCATCAACTAATCATCGACTCAGCTGGAATGATTGCTCCGATCCCGACAAGAGAACCCCTACTTCAACATCAGATACAAGTACAACCCCTCTTTTATGGCCACTTAACGATGAAACATCGACGTTTAATCTTAATGACGTCGATGCTCCTGTTCAACCAATGGCTGATCTGAATTTACCACAAACGACCCCAGTGGCACGTAAGCAAGTTGATGTTCCATCCCCAGTGCCTCGTCAGCGAGTTGAGAGTCCATCCCCAATGCCTCGTCAGCGAGTTGATAGTCCATCCCCAGTGTCTCGTCAGCGAGTTGATGGTCCACGACCAGTGCCTCGTAGGCGAGTTGATGGTCCATCCCCAATGCCTCGTCAGCGAGATGATGGTCCGCCCCCAGCGCCTCTTCAGCAAGATGATGGTCCACCTGAAAACACGGTGGCTCTTCCATCTTTGAAGTCAATGACGTGGGTAATGGAGAACAAAACCTCAAATCCAGAGAACAGAGTAGCCGTTGTCAATCTCAAGTTGCAAGATTACAACAAGAGTCCATCAACAGAATATGAGGTTAAGTTCCATCTCTCTCGGGTTACTGTGGGACCTGTTTTGAAGTCTATGACTGAAGTCGGGGAACAACTTTCAACAACAGCAAATAAGGTTGCTGTAATAAATCTCAAGCTTGATAATGCCCGGGTTTCTGGCGAGTCTGAAGTTAAGTTTCAAGTATCCAGGGATGCATTGGGTGCTGTGCTACGATCAATGGCTTATATCCGCGAGCAACTTTCTTGTGCTGGCGACGCGAACTCAGAACCTGTGTCAAAAAAGCGTCGAAACTGA

Protein sequence

>Msa0860900

MDVHVITIGEGSGSMEHNVDAEFGQVNDAGNSGSHAEGMVSEPYFSEPYLGMVFDSEDSAKSFYSEYARRSGFSSKAGLHGQFNADGTNMFREFVCSREGLKRRMTESCEAMIRIEQKGQNKWVVTKFVKEHSHSLAVPDKVEKLQPVKHFSSVGRTMPETYKGLGLVPTGVMYISIDAHHVSSDNSQKIRNSPAAAAKTSHPVKNSTSMPYNVRQPIKKKTLGRDARDLLEYFMKVQAENPGFFYAIQLDEENRMSNVFWADARSRTAYSHFGDAVTLDTTHRANQYNVPYAPFTGINHHGQMILFGCALIFDDSEASFGWLFKTFLAAMNDRHPLSITTDQDRCIQTAVSQVFPQARHCINKRYVLREGHEKLGHVCRMHPYFHYELYNCINLTETIEEFDFSWNSIIDKYELRGHDWLQSLYSARDQWVPAYFRDSFFAVISPTQGFEASFLDGVVNRHTTLPMFFRQYELALEKWFEKEIESDFETISTNPVLKTPSPMENQVAKLYTQRIFLKFQEELVETFAYTANRIEEDGVNSIFGVAKFDDVEKSYTVTLNQSELRANCTCQMFEFSGILCRHILTVFTVSNVFTIPSHYILKRWTMEAKNSIVLDECGGESLAYESLTSRYANLCREAIRYAEEGAVAMETYDAAMTGLREGGKKVDVMKRNIAKVSSTNHRLSWNDCSDPDKRTPTSTSDTSTTPLLWPLNDETSTFNLNDVDAPVQPMADLNLPQTTPVARKQVDVPSPVPRQRVESPSPMPRQRVDSPSPVSRQRVDGPRPVPRRRVDGPSPMPRQRDDGPPPAPLQQDDGPPENTVALPSLKSMTWVMENKTSNPENRVAVVNLKLQDYNKSPSTEYEVKFHLSRVTVGPVLKSMTEVGEQLSTTANKVAVINLKLDNARVSGESEVKFQVSRDALGAVLRSMAYIREQLSCAGDANSEPVSKKRRN*