AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0742340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742340 MtrunA17_Chr2g0279331 80.000 1255 100 14 6 1134 14 1243 0.0 1860
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742340 AT5G64270.1 73.986 1257 197 18 6 1134 15 1269 0.0 1728

Find 282 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAGATTATCAGTATTT+TGG 0.097766 5_1:+62226842 Msa0742340:CDS
TTCCAACTTCTTGCGTCTTC+TGG 0.164615 5_1:-62225700 None:intergenic
GATGCTACTCCTAAGCTTTC+TGG 0.179637 5_1:+62226381 Msa0742340:CDS
GGAAGTTCTAGGTTCAATTT+TGG 0.199005 5_1:+62228529 Msa0742340:CDS
TGATAGAGTTCTTTATAAAT+TGG 0.206729 5_1:+62227105 Msa0742340:CDS
TCATGCCTATTCTTCAAAAT+TGG 0.208103 5_1:-62228632 None:intergenic
TCTTTCCTCTTTGAGTATAT+TGG 0.214805 5_1:+62229022 Msa0742340:CDS
TTTGCTTGAGGATGCTCTTA+TGG 0.225656 5_1:+62229081 Msa0742340:CDS
CTTGCTACGCCTACGCCTTT+GGG 0.232423 5_1:+62226732 Msa0742340:CDS
GGACCAAGAGAGGCATATTT+TGG 0.249629 5_1:+62227072 Msa0742340:CDS
GGATGAAACACCTACTACTA+TGG 0.252518 5_1:+62226443 Msa0742340:CDS
TGCTGACCGCGATTCTCTTC+TGG 0.258015 5_1:-62226773 None:intergenic
GATGCTTAAGGCACACAAAA+AGG 0.277902 5_1:+62228760 Msa0742340:CDS
AGTATAATAGCTGGCATATA+AGG 0.286423 5_1:-62227713 None:intergenic
TCTTGCTACGCCTACGCCTT+TGG 0.289436 5_1:+62226731 Msa0742340:CDS
AAGTCAATTGTTAATGTTAT+CGG 0.294122 5_1:+62228560 Msa0742340:CDS
TCTTTATAAATTGGATGAAT+TGG 0.295496 5_1:+62227114 Msa0742340:CDS
AAGTTATGCTTATTCTAATT+CGG 0.298556 5_1:+62227740 Msa0742340:CDS
TGCTCTTATGGACAGGGATT+TGG 0.304763 5_1:+62229093 Msa0742340:CDS
GTTTCCACAAGAAGGGTATA+AGG 0.306484 5_1:+62226656 Msa0742340:CDS
ACTGACAAGGCTTGCGAGTT+TGG 0.306959 5_1:+62226995 Msa0742340:CDS
ATTTATAACTCACTGTATAT+TGG 0.309094 5_1:+62229370 Msa0742340:CDS
CTTTGAGTATATTGGTGAAA+TGG 0.316138 5_1:+62229030 Msa0742340:CDS
CATCTTGATCTTTGTCTCTT+CGG 0.317062 5_1:-62226420 None:intergenic
GAAGATGACTCCACGTATTA+AGG 0.319329 5_1:+62228589 Msa0742340:CDS
CGGGTTTATTATTCCATTGA+TGG 0.321545 5_1:+62227687 Msa0742340:CDS
AAACCACCAGGAGCTTCTTT+AGG 0.323685 5_1:-62226806 None:intergenic
CCAAAATACTGATAATCTTC+AGG 0.323833 5_1:-62226842 None:intergenic
GATCTTTGTCTCTTCGGAAT+TGG 0.326372 5_1:-62226414 None:intergenic
TCCTGTTGGTGGTGTTGAAT+TGG 0.331040 5_1:+62226512 Msa0742340:CDS
AGTTATGCTTATTCTAATTC+GGG 0.352145 5_1:+62227741 Msa0742340:CDS
ATGTTAATGTGATGCTTAAT+GGG 0.354823 5_1:+62228257 Msa0742340:CDS
GATGTTAATGTGATGCTTAA+TGG 0.356001 5_1:+62228256 Msa0742340:CDS
AGAGGAAGAAGCCGGTGCGC+TGG 0.369274 5_1:+62226131 Msa0742340:CDS
TCCACCCTGCCCGAAAAGTT+AGG 0.374578 5_1:+62229332 Msa0742340:CDS
CTGGGTTAGGAGGATGGCTT+TGG 0.377749 5_1:+62227891 Msa0742340:CDS
CTACTCCTGGGAGGAGGAAT+AGG 0.377867 5_1:+62226292 Msa0742340:CDS
AGCCACTGTGGAAGGGTATT+AGG 0.382814 5_1:+62227623 Msa0742340:CDS
TGCTGTGAAGCACATGGCAC+TGG 0.383420 5_1:+62229138 Msa0742340:CDS
GAAGAGTATCCGGAAGTTCT+AGG 0.383693 5_1:+62228518 Msa0742340:CDS
TTACTGAATACATCATCATT+AGG 0.386261 5_1:-62225891 None:intergenic
TTTGAGTATATTGGTGAAAT+GGG 0.389391 5_1:+62229031 Msa0742340:CDS
GCATAAGCAACGGAAGTATC+TGG 0.389773 5_1:-62227036 None:intergenic
AGCAGCAGCCTCAGCAAGAG+CGG 0.390557 5_1:-62227566 None:intergenic
GGAGAAGTTTCAAATATGTT+TGG 0.392943 5_1:-62229217 None:intergenic
CAGCAATGTTTACAGTAGAT+TGG 0.397197 5_1:+62229441 Msa0742340:CDS
TCTTCTTCTTCTTCGGTAGC+AGG 0.403825 5_1:-62225807 None:intergenic
GTAGCAAGAAGCTTCCTTGC+AGG 0.404066 5_1:-62226717 None:intergenic
GACTACTATGCCCGTGTTGA+AGG 0.409440 5_1:+62227193 Msa0742340:CDS
TGAGCTTCTTGAGATGCTTA+AGG 0.409469 5_1:+62228748 Msa0742340:CDS
CTTCAAAATTGGTGTCAACC+TGG 0.416883 5_1:-62228621 None:intergenic
CCATATCTTCCTCAGATTTG+TGG 0.421065 5_1:+62228347 Msa0742340:intron
CCAACACCTGGTGCTTTACA+AGG 0.421539 5_1:+62226540 Msa0742340:CDS
GCATATAAGGCTTCCATCAA+TGG 0.423698 5_1:-62227700 None:intergenic
AATGTGATGCTTAATGGGTT+TGG 0.423984 5_1:+62228262 Msa0742340:CDS
AGTGTTGTTGCATCTGCTCT+TGG 0.424109 5_1:+62227334 Msa0742340:CDS
GTTGCTTATGCAGCCTACTT+TGG 0.424768 5_1:+62227048 Msa0742340:CDS
GTTGTCTTGTATGAGTATCT+TGG 0.425603 5_1:+62228494 Msa0742340:CDS
GGAATAGATGTGATCAGAAT+CGG 0.429660 5_1:+62226184 Msa0742340:CDS
TGGACAGGGATTTGGTTCAT+AGG 0.430450 5_1:+62229101 Msa0742340:CDS
TGGGTAGGATTGCTGATCGT+GGG 0.432130 5_1:+62228684 Msa0742340:CDS
TGAGAAAACGCTTGATCCTT+CGG 0.432532 5_1:+62226010 Msa0742340:CDS
ATAACATTGATGAATATGTT+AGG 0.437807 5_1:+62227290 Msa0742340:CDS
AGAGTAATTGATGCTACTCC+TGG 0.438883 5_1:+62226279 Msa0742340:CDS
GCTGAGGCTGCTGCTCCTTA+CGG 0.439032 5_1:+62227574 Msa0742340:CDS
TGGTGTCATTGAGTTCGAAT+CGG 0.441493 5_1:-62226253 None:intergenic
CCAGAGCTTAATGTGCAAAA+TGG 0.445247 5_1:+62228983 Msa0742340:CDS
TCCATTTGCTGAACTATGTC+TGG 0.446236 5_1:+62229194 Msa0742340:CDS
CTACTCCTGGTGGTACAACT+TGG 0.449497 5_1:+62226358 Msa0742340:CDS
AGCGTTGAAGAGAGAGAAAG+AGG 0.451718 5_1:+62226068 Msa0742340:CDS
TCCGATTCAATCTCCGTCTC+AGG 0.454716 5_1:-62225947 None:intergenic
AGTAGTCTTCGTCAATCAAA+AGG 0.454920 5_1:-62227177 None:intergenic
ATCGTTATCGCTGTAAAGAT+CGG 0.456879 5_1:-62225760 None:intergenic
GACACCGACACCTGGGAGAT+TGG 0.458283 5_1:+62226323 Msa0742340:CDS
CATCATCGCTGATCTGCTCT+TGG 0.458660 5_1:-62228237 None:intergenic
TGAAGGGATGAGGGTAGCCT+TGG 0.463322 5_1:+62229270 Msa0742340:CDS
CTCACTGTATATTGGAGCTC+AGG 0.463332 5_1:+62229378 Msa0742340:CDS
GCCAATTCAACACCACCAAC+AGG 0.464397 5_1:-62226513 None:intergenic
GTGCCATGAGGAACAATTGA+TGG 0.465345 5_1:+62228460 Msa0742340:CDS
GGGCAGGGTGGAACAGTCCT+TGG 0.466059 5_1:-62229321 None:intergenic
ACAAGAATCTTATGCACATA+AGG 0.466521 5_1:-62227142 None:intergenic
GAACGAAGAGGAGTTGTCTC+TGG 0.467946 5_1:+62226883 Msa0742340:CDS
TTGAGGATGCTCTTATGGAC+AGG 0.469559 5_1:+62229086 Msa0742340:CDS
TCTTCGGTAGCAGGAATTGA+AGG 0.470333 5_1:-62225798 None:intergenic
ACAGATCCTTATCCATTCTC+TGG 0.473956 5_1:-62228723 None:intergenic
GTCAGTGTTGCTGATATTGT+TGG 0.474429 5_1:+62227967 Msa0742340:CDS
TCATCAATGTTATCTATGTC+AGG 0.476225 5_1:-62227280 None:intergenic
TGTTTCTGCGAGAAGCTTCG+TGG 0.476727 5_1:-62225839 None:intergenic
GCCAGACATAGTTCAGCAAA+TGG 0.476897 5_1:-62229195 None:intergenic
ATCCAGAAGACGCAAGAAGT+TGG 0.477538 5_1:+62225698 Msa0742340:CDS
TCTAATCTCAGTAAAGCTGC+TGG 0.478206 5_1:+62227229 Msa0742340:CDS
AAAATTGAACCTAGAACTTC+CGG 0.479279 5_1:-62228527 None:intergenic
AGCAAAAGCATCATGTCTAT+CGG 0.481028 5_1:-62225979 None:intergenic
GCTTATGCAGCCTACTTTGG+AGG 0.483942 5_1:+62227051 Msa0742340:CDS
ATAATTTGTTGAGGTGGGAG+AGG 0.487090 5_1:+62226583 Msa0742340:CDS
CTACTCCTAAGCTTTCTGGC+GGG 0.487149 5_1:+62226385 Msa0742340:CDS
CAAGGTCAATACAGTTCTCC+TGG 0.488577 5_1:-62228661 None:intergenic
CCACCCTGCCCGAAAAGTTA+GGG 0.489623 5_1:+62229333 Msa0742340:CDS
TTCAAAATTGGTGTCAACCT+GGG 0.490478 5_1:-62228620 None:intergenic
GGTGTCATTGAGTTCGAATC+GGG 0.492887 5_1:-62226252 None:intergenic
ACCTGAGACGGAGATTGAAT+CGG 0.493420 5_1:+62225946 Msa0742340:CDS
AGTTTGTACCTGCCAGAGAA+TGG 0.493660 5_1:+62228711 Msa0742340:CDS
CTCAACAAATTATACTGCTC+CGG 0.495008 5_1:-62226573 None:intergenic
TTCAAGAAGGGCAATAAAGC+AGG 0.495269 5_1:-62227361 None:intergenic
TTTACAAGGGTCGTTTATGC+CGG 0.495463 5_1:+62226554 Msa0742340:CDS
GTTGATTCTGATGCTACTCC+TGG 0.497040 5_1:+62226345 Msa0742340:CDS
GAAAAGTTAGGGAGGTGTAT+TGG 0.499131 5_1:+62229344 Msa0742340:CDS
AAACTTCTGGGTTAGGAGGA+TGG 0.499766 5_1:+62227885 Msa0742340:CDS
GTTCTTAGTTACTGTCTCCA+AGG 0.501740 5_1:+62229304 Msa0742340:CDS
GTCTCAGGTAATCATCTTCA+CGG 0.502258 5_1:-62225932 None:intergenic
GTTATCTATGTCAGGCCTCA+TGG 0.502813 5_1:-62227272 None:intergenic
GGCTACCCTCATCCCTTCAA+TGG 0.503009 5_1:-62229266 None:intergenic
GCAGTATAATTTGTTGAGGT+GGG 0.504182 5_1:+62226578 Msa0742340:CDS
CTCCTGGGAGGAGGAATAGG+TGG 0.505618 5_1:+62226295 Msa0742340:CDS
GTAGTCTTCGTCAATCAAAA+GGG 0.507572 5_1:-62227176 None:intergenic
GTTACACTTCCCATAGTAGT+AGG 0.510181 5_1:-62226453 None:intergenic
TGCTGTGACTCCTTTGCTTG+AGG 0.511865 5_1:+62229069 Msa0742340:CDS
AAGGCTTGCGAGTTTGGTGC+TGG 0.512465 5_1:+62227001 Msa0742340:CDS
TTTGGGTTCTGAAGATGCGC+TGG 0.512678 5_1:+62229171 Msa0742340:CDS
TTGCTACGCCTACGCCTTTG+GGG 0.512894 5_1:+62226733 Msa0742340:CDS
TATTTCCCTCCCTTCAACAC+GGG 0.514922 5_1:-62227203 None:intergenic
GCAAAAGCATCATGTCTATC+GGG 0.516527 5_1:-62225978 None:intergenic
AGCAGTATAATTTGTTGAGG+TGG 0.517845 5_1:+62226577 Msa0742340:CDS
TAACCAAAATATGCCTCTCT+TGG 0.517982 5_1:-62227075 None:intergenic
TACCTGCCAGAGAATGGATA+AGG 0.518951 5_1:+62228717 Msa0742340:CDS
ATCCTTATCCATTCTCTGGC+AGG 0.519168 5_1:-62228719 None:intergenic
ATATGCCAGCTATTATACTA+AGG 0.519308 5_1:+62227717 Msa0742340:CDS
CGAAGAGACAAAGATCAAGA+TGG 0.520569 5_1:+62226421 Msa0742340:CDS
GAAGAAAATTGTTCTGAAAG+TGG 0.520733 5_1:+62227789 Msa0742340:CDS
ACACCAGGTGTTACTCCTGT+TGG 0.521572 5_1:+62226498 Msa0742340:CDS
AAGCAATTCGCATCTTTCAC+AGG 0.521776 5_1:+62225723 Msa0742340:CDS
GCTGTGAAGCACATGGCACT+GGG 0.522986 5_1:+62229139 Msa0742340:CDS
GTCTCTTGCCGCTCTTGCTG+AGG 0.523093 5_1:+62227558 Msa0742340:CDS
AAGCAGCAGACCTCATTTCG+AGG 0.525504 5_1:+62228417 Msa0742340:CDS
GAATAGATGTGATCAGAATC+GGG 0.526072 5_1:+62226185 Msa0742340:CDS
ATCACAGCATTTATAACATG+TGG 0.526617 5_1:-62229238 None:intergenic
TGGGATGAGACACCGACACC+TGG 0.527355 5_1:+62226315 Msa0742340:CDS
TAATTTGTTGAGGTGGGAGA+GGG 0.527574 5_1:+62226584 Msa0742340:CDS
GTAACCCCGCCAGAAAGCTT+AGG 0.530864 5_1:-62226390 None:intergenic
TGGAAGCCATTGAAGGGATG+AGG 0.531614 5_1:+62229260 Msa0742340:CDS
TCAGAAACTTCTGGGTTAGG+AGG 0.533859 5_1:+62227881 Msa0742340:CDS
AGAAGCCGGTGCGCTGGAGA+AGG 0.533863 5_1:+62226137 Msa0742340:CDS
TCTCAGTAAAGCTGCTGGGT+TGG 0.535365 5_1:+62227234 Msa0742340:CDS
GTGTGTGAGCACTGAGGGTG+TGG 0.535884 5_1:+62227819 Msa0742340:CDS
AGTGTTGAAGCCACTGTGGA+AGG 0.538648 5_1:+62227615 Msa0742340:CDS
AAAACCTTATACCCTTCTTG+TGG 0.539245 5_1:-62226660 None:intergenic
GAAGGGATGAGGGTAGCCTT+GGG 0.540075 5_1:+62229271 Msa0742340:CDS
GTATTAAGGATTTGCTTCCC+AGG 0.540095 5_1:+62228603 Msa0742340:CDS
AGAAAGCTAAGACTTCTGAC+TGG 0.541569 5_1:+62226223 Msa0742340:CDS
CTCTCTTGGTCCTCCAAAGT+AGG 0.542045 5_1:-62227061 None:intergenic
ATTATCCTTCTCCAGCGCAC+CGG 0.545178 5_1:-62226142 None:intergenic
TCCCACCTATTCCTCCTCCC+AGG 0.548321 5_1:-62226297 None:intergenic
GCTGTAAAGATCGGCGTCGA+AGG 0.548370 5_1:-62225751 None:intergenic
GTATCTTGGAGAAGAGTATC+CGG 0.548626 5_1:+62228508 Msa0742340:CDS
GAACAATTGATGGGTCATCT+TGG 0.549166 5_1:+62228470 Msa0742340:CDS
GTGGGTAGGATTGCTGATCG+TGG 0.549308 5_1:+62228683 Msa0742340:CDS
CTTCTTCTTAAAGTGAAGAA+CGG 0.550046 5_1:+62226935 Msa0742340:CDS
CTGCTGCACAATCTTAATAC+CGG 0.550082 5_1:-62227425 None:intergenic
CTGACAAACAGCTTTCAAGA+AGG 0.551764 5_1:-62227374 None:intergenic
ATCGCTGATCTGCTCTTGGA+AGG 0.552032 5_1:-62228233 None:intergenic
GCAACACCGTGGTAAGGTGC+TGG 0.552685 5_1:+62227645 Msa0742340:CDS
CTGTGCTCATCCTCTAGTGA+AGG 0.552750 5_1:-62229421 None:intergenic
AACTTCCTTAGTATAATAGC+TGG 0.552767 5_1:-62227722 None:intergenic
TACTCCTAAGCTTTCTGGCG+GGG 0.553155 5_1:+62226386 Msa0742340:CDS
TGTGAAGCACATGGCACTGG+GGG 0.553756 5_1:+62229141 Msa0742340:CDS
TAATCTTCAGGTTTCATGAA+AGG 0.553861 5_1:-62226830 None:intergenic
ATGCTATGTTTCCACAAGAA+GGG 0.554606 5_1:+62226649 Msa0742340:CDS
CAAGCAACTTGTGGAGACTA+CGG 0.556291 5_1:+62227927 Msa0742340:CDS
ATCCGATATAGATGCACGGT+TGG 0.558893 5_1:+62228180 Msa0742340:intron
GATGCTATGTTTCCACAAGA+AGG 0.558947 5_1:+62226648 Msa0742340:CDS
GTAGCATCAATTACTCTCCC+TGG 0.558959 5_1:-62226273 None:intergenic
GAAGAGACAAAGATCAAGAT+GGG 0.562035 5_1:+62226422 Msa0742340:CDS
GGGAGAGGGATATTGAAGAG+AGG 0.562525 5_1:+62226598 Msa0742340:CDS
TCCTGGGAGGAGGAATAGGT+GGG 0.562941 5_1:+62226296 Msa0742340:CDS
CAGTGCAGGTAAAACTGTGA+AGG 0.563535 5_1:-62228942 None:intergenic
AAGAAGGAAGAGGAAGAAGC+CGG 0.565614 5_1:+62226123 Msa0742340:CDS
CGATACTCGTTCATCAGTGC+AGG 0.565716 5_1:-62228956 None:intergenic
CAACAGCAATCCTCGAAATG+AGG 0.566234 5_1:-62228427 None:intergenic
CCTTGTAAAGCACCAGGTGT+TGG 0.567740 5_1:-62226540 None:intergenic
GATGTTCCTAAAGAAGCTCC+TGG 0.568413 5_1:+62226800 Msa0742340:CDS
TTCATGAAAGGCAAACCACC+AGG 0.568802 5_1:-62226818 None:intergenic
GATGAAACACCTACTACTAT+GGG 0.568952 5_1:+62226444 Msa0742340:CDS
TTTCACCAATATACTCAAAG+AGG 0.569856 5_1:-62229027 None:intergenic
ACATGTTATAAATGCTGTGA+TGG 0.570251 5_1:+62229240 Msa0742340:CDS
CATGCTGCTGCTTATACACC+AGG 0.570621 5_1:+62226483 Msa0742340:CDS
GTAAAGATCGGCGTCGAAGG+TGG 0.571363 5_1:-62225748 None:intergenic
GAATAGGCATGAGAAAGTCC+AGG 0.573723 5_1:+62228643 Msa0742340:CDS
CCAGGTGTTACTCCTGTTGG+TGG 0.574354 5_1:+62226501 Msa0742340:CDS
CTAATCTCAGTAAAGCTGCT+GGG 0.576518 5_1:+62227230 Msa0742340:CDS
TACTCCTGGTGGTACAACTT+GGG 0.577114 5_1:+62226359 Msa0742340:CDS
ACTACTATGCCCGTGTTGAA+GGG 0.579026 5_1:+62227194 Msa0742340:CDS
TGACAAACAGCTTTCAAGAA+GGG 0.580821 5_1:-62227373 None:intergenic
CACAGAGGAAAACAGCTTTG+AGG 0.580944 5_1:+62226966 Msa0742340:CDS
GGAGAACTGTATTGACCTTG+TGG 0.582863 5_1:+62228664 Msa0742340:CDS
ATAATAAATCTCAGCAGAAG+AGG 0.583286 5_1:+62226160 Msa0742340:CDS
CTATGCCCGTGTTGAAGGGA+GGG 0.585454 5_1:+62227198 Msa0742340:CDS
TGCCATGAGGAACAATTGAT+GGG 0.585856 5_1:+62228461 Msa0742340:CDS
TCAAAACTTTCAATACCGTA+AGG 0.585959 5_1:-62227589 None:intergenic
TGTGATCAGAATCGGGAGGA+AGG 0.588038 5_1:+62226192 Msa0742340:CDS
GAGAACTGTATTGACCTTGT+GGG 0.588815 5_1:+62228665 Msa0742340:CDS
TTGATGCTACTCCTGGGAGG+AGG 0.589392 5_1:+62226286 Msa0742340:CDS
TAAAGATCGGCGTCGAAGGT+GGG 0.592374 5_1:-62225747 None:intergenic
AAGAAACTACAAGCAACTTG+TGG 0.594902 5_1:+62227918 Msa0742340:CDS
AAGCGAGTCCCCAAAGGCGT+AGG 0.595077 5_1:-62226741 None:intergenic
CGGAGCAGTATAATTTGTTG+AGG 0.596666 5_1:+62226574 Msa0742340:CDS
ACTGTATTGACCTTGTGGGT+AGG 0.597148 5_1:+62228669 Msa0742340:CDS
TATTAGGCAACACCGTGGTA+AGG 0.597389 5_1:+62227639 Msa0742340:CDS
GACCCATCAATTGTTCCTCA+TGG 0.598532 5_1:-62228463 None:intergenic
GTGTTGAAGCCACTGTGGAA+GGG 0.600203 5_1:+62227616 Msa0742340:CDS
TGAGGATGCTCTTATGGACA+GGG 0.601368 5_1:+62229087 Msa0742340:CDS
TCAGAATCAACCAATCTCCC+AGG 0.601870 5_1:-62226333 None:intergenic
TGCAGCATACCCTTCACTAG+AGG 0.602611 5_1:+62229411 Msa0742340:CDS
CTGTGAAGCACATGGCACTG+GGG 0.603322 5_1:+62229140 Msa0742340:CDS
TGTGCTCATCCTCTAGTGAA+GGG 0.603569 5_1:-62229420 None:intergenic
GGAAGCCATTGAAGGGATGA+GGG 0.604873 5_1:+62229261 Msa0742340:CDS
AGATTTGTGGTACTATCAAG+TGG 0.606090 5_1:+62228360 Msa0742340:intron
TCAAGTTCCTCATCAGTCAA+AGG 0.607714 5_1:-62226627 None:intergenic
ACAATAAGAGCGCAAAGGTG+AGG 0.609210 5_1:+62228390 Msa0742340:CDS
ATGATGTATTCAGTAAGTCT+CGG 0.610440 5_1:+62225898 Msa0742340:CDS
CTGATAAAGCGAGTCCCCAA+AGG 0.611552 5_1:-62226747 None:intergenic
CCACCAACAGGAGTAACACC+TGG 0.611971 5_1:-62226501 None:intergenic
GTTGAATGACGAGAACGAAG+AGG 0.612510 5_1:+62226871 Msa0742340:CDS
AAGAACAACAGCAGAACCCA+AGG 0.612888 5_1:-62229287 None:intergenic
ATAAATCTCAGCAGAAGAGG+AGG 0.612930 5_1:+62226163 Msa0742340:CDS
GTATATTGGTGAAATGGGAA+AGG 0.614596 5_1:+62229036 Msa0742340:CDS
ACTATGCCCGTGTTGAAGGG+AGG 0.615072 5_1:+62227197 Msa0742340:CDS
GAGTAATTGATGCTACTCCT+GGG 0.615877 5_1:+62226280 Msa0742340:CDS
TCAACCAATCTCCCAGGTGT+CGG 0.616198 5_1:-62226327 None:intergenic
GTATAAGCAGCAGCATGTAA+TGG 0.617708 5_1:-62226477 None:intergenic
TTATTTCCCTCCCTTCAACA+CGG 0.617901 5_1:-62227204 None:intergenic
CCTCATGGCAGCAATCATAG+TGG 0.618586 5_1:-62227257 None:intergenic
GAAAGCTAAGACTTCTGACT+GGG 0.618728 5_1:+62226224 Msa0742340:CDS
GCATCCCAAGTTGTACCACC+AGG 0.618799 5_1:-62226363 None:intergenic
AGTGCAGGTAAAACTGTGAA+GGG 0.621527 5_1:-62228941 None:intergenic
GCTACTCCTAAGCTTTCTGG+CGG 0.622984 5_1:+62226384 Msa0742340:CDS
GATTCGAACTCAATGACACC+AGG 0.623348 5_1:+62226255 Msa0742340:CDS
GCTGTGATGGAAGCCATTGA+AGG 0.626195 5_1:+62229253 Msa0742340:CDS
AAAGTAGGCTGCATAAGCAA+CGG 0.626821 5_1:-62227046 None:intergenic
CTACTTTGGAGGACCAAGAG+AGG 0.627256 5_1:+62227062 Msa0742340:CDS
AACGACCCTTGTAAAGCACC+AGG 0.628494 5_1:-62226546 None:intergenic
ATAAGAGCATCCTCAAGCAA+AGG 0.629993 5_1:-62229079 None:intergenic
CCACTATGATTGCTGCCATG+AGG 0.631101 5_1:+62227257 Msa0742340:CDS
TGTTTCTGCAACAATAGCAA+TGG 0.632422 5_1:-62228912 None:intergenic
CTGTGATGGAAGCCATTGAA+GGG 0.634079 5_1:+62229254 Msa0742340:CDS
AAACAGTGTGTGAGCACTGA+GGG 0.635126 5_1:+62227814 Msa0742340:CDS
TGCATCTGCTGTGAAGCACA+TGG 0.635478 5_1:+62229132 Msa0742340:CDS
GGAAGTATCTGGTTAAACAA+AGG 0.641476 5_1:-62227025 None:intergenic
GATCAGAATCGGGAGGAAGG+TGG 0.642321 5_1:+62226195 Msa0742340:CDS
GAATCGTCCTTTGACTGATG+AGG 0.646129 5_1:+62226620 Msa0742340:CDS
GAATTGGCTACTCCAACACC+TGG 0.650303 5_1:+62226528 Msa0742340:CDS
GGGATGAGACACCGACACCT+GGG 0.651390 5_1:+62226316 Msa0742340:CDS
TAGTCTTCGTCAATCAAAAG+GGG 0.651667 5_1:-62227175 None:intergenic
TTTGAGGCAGCTAACTGACA+AGG 0.652049 5_1:+62226982 Msa0742340:CDS
TCATGGCAAGCTCGGCACAC+CGG 0.653594 5_1:+62227406 Msa0742340:CDS
GATTCTGATGCTACTCCTGG+TGG 0.656969 5_1:+62226348 Msa0742340:CDS
CCCTGCCCGAAAAGTTAGGG+AGG 0.658573 5_1:+62229336 Msa0742340:CDS
TACGGTTGAGATAGCAAACA+AGG 0.658749 5_1:+62227945 Msa0742340:CDS
GGGTAGGATTGCTGATCGTG+GGG 0.665788 5_1:+62228685 Msa0742340:CDS
GTTAAACAATAAGAGCGCAA+AGG 0.665978 5_1:+62228385 Msa0742340:CDS
TGCCAATTAGGACACCTGCA+AGG 0.675865 5_1:+62226703 Msa0742340:intron
CAACACCTGGTGCTTTACAA+GGG 0.676164 5_1:+62226541 Msa0742340:CDS
TTTGTGGTACTATCAAGTGG+AGG 0.684064 5_1:+62228363 Msa0742340:CDS
GAATCGTGTATGCACTACTG+TGG 0.684488 5_1:+62228889 Msa0742340:CDS
TGCCTAATACCCTTCCACAG+TGG 0.684739 5_1:-62227625 None:intergenic
TCATCATTAGGATTGACGAT+CGG 0.686830 5_1:-62225879 None:intergenic
TTTGAATGATGAGAATCAGA+AGG 0.688179 5_1:+62227516 Msa0742340:CDS
GGAAGCAAATCCTTAATACG+TGG 0.689632 5_1:-62228599 None:intergenic
GTTCCTAAAGAAGCTCCTGG+TGG 0.695657 5_1:+62226803 Msa0742340:CDS
GTGAAGATGATTACCTGAGA+CGG 0.697582 5_1:+62225934 Msa0742340:CDS
GATCATCCGATATAGATGCA+CGG 0.702732 5_1:+62228176 Msa0742340:intron
ATGTATTCAGTAAGTCTCGG+AGG 0.708946 5_1:+62225901 Msa0742340:CDS
TAATTGATGCTACTCCTGGG+AGG 0.712647 5_1:+62226283 Msa0742340:CDS
TAGATGTGATCAGAATCGGG+AGG 0.712814 5_1:+62226188 Msa0742340:CDS
ACTCAGTGTTGAAGCCACTG+TGG 0.713505 5_1:+62227611 Msa0742340:CDS
GATCAGCAATCCTACCCACA+AGG 0.716041 5_1:-62228679 None:intergenic
ACGCAGCCAGCACCTTACCA+CGG 0.717063 5_1:-62227651 None:intergenic
CAGATTCCAGAAGAGAATCG+CGG 0.724942 5_1:+62226767 Msa0742340:CDS
ATTCGAACTCAATGACACCA+GGG 0.734795 5_1:+62226256 Msa0742340:CDS
TGTCATGAAGCAGTGCCATG+AGG 0.764533 5_1:+62228448 Msa0742340:CDS
GAAACAGTGTGTGAGCACTG+AGG 0.771981 5_1:+62227813 Msa0742340:CDS
AGAACGGTACGCCAACACAG+AGG 0.779805 5_1:+62226951 Msa0742340:CDS
AAGGGTATTAGGCAACACCG+TGG 0.809985 5_1:+62227634 Msa0742340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATAGAGTTCTTTATAAAT+TGG + chr5_1:62227105-62227124 Msa0742340:CDS 20.0%
!! TCTTTATAAATTGGATGAAT+TGG + chr5_1:62227114-62227133 Msa0742340:CDS 20.0%
!! ATAACATTGATGAATATGTT+AGG + chr5_1:62227290-62227309 Msa0742340:CDS 20.0%
!! AAGTTATGCTTATTCTAATT+CGG + chr5_1:62227740-62227759 Msa0742340:CDS 20.0%
!!! AATTTTCTTCATTTCTTCAT+CGG - chr5_1:62227779-62227798 None:intergenic 20.0%
!! NNNNNNNNNNGTCACTAACT+TGG + chr5_1:62228153-62228172 Msa0742340:intron 20.0%
!! NNNNNNNNNGTCACTAACTT+GGG + chr5_1:62228154-62228173 Msa0742340:intron 20.0%
!! AAGTCAATTGTTAATGTTAT+CGG + chr5_1:62228560-62228579 Msa0742340:CDS 20.0%
!! ATTTATAACTCACTGTATAT+TGG + chr5_1:62229370-62229389 Msa0742340:CDS 20.0%
! TTACTGAATACATCATCATT+AGG - chr5_1:62225894-62225913 None:intergenic 25.0%
!! CTGAAGATTATCAGTATTTT+GGG + chr5_1:62226843-62226862 Msa0742340:CDS 25.0%
!! TGAAGATTATCAGTATTTTG+GGG + chr5_1:62226844-62226863 Msa0742340:CDS 25.0%
! AGTTATGCTTATTCTAATTC+GGG + chr5_1:62227741-62227760 Msa0742340:CDS 25.0%
!! ATTTTCTTCATTTCTTCATC+GGG - chr5_1:62227778-62227797 None:intergenic 25.0%
! ATGTTAATGTGATGCTTAAT+GGG + chr5_1:62228257-62228276 Msa0742340:CDS 25.0%
! TTTGAGTATATTGGTGAAAT+GGG + chr5_1:62229031-62229050 Msa0742340:CDS 25.0%
ATTGTCTTCTTCTTCTTCTT+CGG - chr5_1:62225817-62225836 None:intergenic 30.0%
ATGATGTATTCAGTAAGTCT+CGG + chr5_1:62225898-62225917 Msa0742340:CDS 30.0%
TATGCTGATATTATGAGAGA+TGG + chr5_1:62226041-62226060 Msa0742340:intron 30.0%
ATAATAAATCTCAGCAGAAG+AGG + chr5_1:62226160-62226179 Msa0742340:CDS 30.0%
! TAATCTTCAGGTTTCATGAA+AGG - chr5_1:62226833-62226852 None:intergenic 30.0%
CCAAAATACTGATAATCTTC+AGG - chr5_1:62226845-62226864 None:intergenic 30.0%
! CCTGAAGATTATCAGTATTT+TGG + chr5_1:62226842-62226861 Msa0742340:CDS 30.0%
CTTCTTCTTAAAGTGAAGAA+CGG + chr5_1:62226935-62226954 Msa0742340:CDS 30.0%
ACAAGAATCTTATGCACATA+AGG - chr5_1:62227145-62227164 None:intergenic 30.0%
TCATCAATGTTATCTATGTC+AGG - chr5_1:62227283-62227302 None:intergenic 30.0%
TTTGTCAGAGTAAAAAGTCA+TGG + chr5_1:62227389-62227408 Msa0742340:CDS 30.0%
! TTCAAAAAGAGATCTGAGAT+GGG - chr5_1:62227482-62227501 None:intergenic 30.0%
TTTCAAAAAGAGATCTGAGA+TGG - chr5_1:62227483-62227502 None:intergenic 30.0%
!!! CTTTTTGAAATTATAGCGCA+TGG + chr5_1:62227493-62227512 Msa0742340:CDS 30.0%
TTTGAATGATGAGAATCAGA+AGG + chr5_1:62227516-62227535 Msa0742340:CDS 30.0%
TCAAAACTTTCAATACCGTA+AGG - chr5_1:62227592-62227611 None:intergenic 30.0%
AGTATAATAGCTGGCATATA+AGG - chr5_1:62227716-62227735 None:intergenic 30.0%
ATATGCCAGCTATTATACTA+AGG + chr5_1:62227717-62227736 Msa0742340:CDS 30.0%
AACTTCCTTAGTATAATAGC+TGG - chr5_1:62227725-62227744 None:intergenic 30.0%
!! GAAGAAAATTGTTCTGAAAG+TGG + chr5_1:62227789-62227808 Msa0742340:CDS 30.0%
! AGAAGTTTCTGAAAAACTCA+GGG - chr5_1:62227873-62227892 None:intergenic 30.0%
!! TGAGTTTTTCAGAAACTTCT+GGG + chr5_1:62227873-62227892 Msa0742340:CDS 30.0%
GATGTTAATGTGATGCTTAA+TGG + chr5_1:62228256-62228275 Msa0742340:CDS 30.0%
AAAATTGAACCTAGAACTTC+CGG - chr5_1:62228530-62228549 None:intergenic 30.0%
!!! GAAGTTCTAGGTTCAATTTT+GGG + chr5_1:62228530-62228549 Msa0742340:CDS 30.0%
!! TGACACCAATTTTGAAGAAT+AGG + chr5_1:62228627-62228646 Msa0742340:CDS 30.0%
TCATGCCTATTCTTCAAAAT+TGG - chr5_1:62228635-62228654 None:intergenic 30.0%
TCTTTCCTCTTTGAGTATAT+TGG + chr5_1:62229022-62229041 Msa0742340:CDS 30.0%
TTTCACCAATATACTCAAAG+AGG - chr5_1:62229030-62229049 None:intergenic 30.0%
CTTTGAGTATATTGGTGAAA+TGG + chr5_1:62229030-62229049 Msa0742340:CDS 30.0%
GGAGAAGTTTCAAATATGTT+TGG - chr5_1:62229220-62229239 None:intergenic 30.0%
ATCACAGCATTTATAACATG+TGG - chr5_1:62229241-62229260 None:intergenic 30.0%
ACATGTTATAAATGCTGTGA+TGG + chr5_1:62229240-62229259 Msa0742340:CDS 30.0%
ATCGTTATCGCTGTAAAGAT+CGG - chr5_1:62225763-62225782 None:intergenic 35.0%
TCATCATTAGGATTGACGAT+CGG - chr5_1:62225882-62225901 None:intergenic 35.0%
!! AGCAAAAGCATCATGTCTAT+CGG - chr5_1:62225982-62226001 None:intergenic 35.0%
TTCCAAGAAGAAGAAGAAGA+AGG + chr5_1:62226107-62226126 Msa0742340:CDS 35.0%
TTCCTTCTTCTTCTTCTTCT+TGG - chr5_1:62226112-62226131 None:intergenic 35.0%
GGAATAGATGTGATCAGAAT+CGG + chr5_1:62226184-62226203 Msa0742340:CDS 35.0%
GAATAGATGTGATCAGAATC+GGG + chr5_1:62226185-62226204 Msa0742340:CDS 35.0%
CATCTTGATCTTTGTCTCTT+CGG - chr5_1:62226423-62226442 None:intergenic 35.0%
GAAGAGACAAAGATCAAGAT+GGG + chr5_1:62226422-62226441 Msa0742340:CDS 35.0%
GATGAAACACCTACTACTAT+GGG + chr5_1:62226444-62226463 Msa0742340:CDS 35.0%
CTCAACAAATTATACTGCTC+CGG - chr5_1:62226576-62226595 None:intergenic 35.0%
!! AGCAGTATAATTTGTTGAGG+TGG + chr5_1:62226577-62226596 Msa0742340:CDS 35.0%
!! GCAGTATAATTTGTTGAGGT+GGG + chr5_1:62226578-62226597 Msa0742340:CDS 35.0%
ATGCTATGTTTCCACAAGAA+GGG + chr5_1:62226649-62226668 Msa0742340:CDS 35.0%
AAAACCTTATACCCTTCTTG+TGG - chr5_1:62226663-62226682 None:intergenic 35.0%
!! ACAAGAAGGGTATAAGGTTT+TGG + chr5_1:62226662-62226681 Msa0742340:intron 35.0%
CTAATTGGCACATAAGAAAC+AGG - chr5_1:62226693-62226712 None:intergenic 35.0%
! CTGTTTCTTATGTGCCAATT+AGG + chr5_1:62226691-62226710 Msa0742340:intron 35.0%
!! GGAAGTATCTGGTTAAACAA+AGG - chr5_1:62227028-62227047 None:intergenic 35.0%
TAACCAAAATATGCCTCTCT+TGG - chr5_1:62227078-62227097 None:intergenic 35.0%
!!! AGAGAGGCATATTTTGGTTA+AGG + chr5_1:62227078-62227097 Msa0742340:CDS 35.0%
TAGTCTTCGTCAATCAAAAG+GGG - chr5_1:62227178-62227197 None:intergenic 35.0%
GTAGTCTTCGTCAATCAAAA+GGG - chr5_1:62227179-62227198 None:intergenic 35.0%
AGTAGTCTTCGTCAATCAAA+AGG - chr5_1:62227180-62227199 None:intergenic 35.0%
TGACAAACAGCTTTCAAGAA+GGG - chr5_1:62227376-62227395 None:intergenic 35.0%
!!! CAGCAGATTGCTATTTTGAT+TGG + chr5_1:62227442-62227461 Msa0742340:CDS 35.0%
! TCAAAAAGAGATCTGAGATG+GGG - chr5_1:62227481-62227500 None:intergenic 35.0%
CGGGTTTATTATTCCATTGA+TGG + chr5_1:62227687-62227706 Msa0742340:CDS 35.0%
! CAGAAGTTTCTGAAAAACTC+AGG - chr5_1:62227874-62227893 None:intergenic 35.0%
!! CTGAGTTTTTCAGAAACTTC+TGG + chr5_1:62227872-62227891 Msa0742340:CDS 35.0%
! TTTTCAGAAACTTCTGGGTT+AGG + chr5_1:62227878-62227897 Msa0742340:CDS 35.0%
AAGAAACTACAAGCAACTTG+TGG + chr5_1:62227918-62227937 Msa0742340:CDS 35.0%
!! TTGGAAGAGCTTTTGATTGA+TGG + chr5_1:62228199-62228218 Msa0742340:CDS 35.0%
!! AATGTGATGCTTAATGGGTT+TGG + chr5_1:62228262-62228281 Msa0742340:CDS 35.0%
!! ATGGTTTTACCACAAATCTG+AGG - chr5_1:62228331-62228350 None:intergenic 35.0%
! TTGATAGTACCACAAATCTG+AGG - chr5_1:62228359-62228378 None:intergenic 35.0%
AGATTTGTGGTACTATCAAG+TGG + chr5_1:62228360-62228379 Msa0742340:intron 35.0%
! GTTAAACAATAAGAGCGCAA+AGG + chr5_1:62228385-62228404 Msa0742340:CDS 35.0%
GTTGTCTTGTATGAGTATCT+TGG + chr5_1:62228494-62228513 Msa0742340:CDS 35.0%
!!! GGAAGTTCTAGGTTCAATTT+TGG + chr5_1:62228529-62228548 Msa0742340:CDS 35.0%
!! TTCAAAATTGGTGTCAACCT+GGG - chr5_1:62228623-62228642 None:intergenic 35.0%
ATGCTTAAGGCACACAAAAA+GGG + chr5_1:62228761-62228780 Msa0742340:CDS 35.0%
! GGCTTTTGCAATATATCCAA+AGG - chr5_1:62228810-62228829 None:intergenic 35.0%
GGATATATTGCAAAAGCCAT+CGG + chr5_1:62228812-62228831 Msa0742340:intron 35.0%
! GTTGAATAATCTCAAGTTGC+AGG + chr5_1:62228859-62228878 Msa0742340:intron 35.0%
! TGTTTCTGCAACAATAGCAA+TGG - chr5_1:62228915-62228934 None:intergenic 35.0%
GTATATTGGTGAAATGGGAA+AGG + chr5_1:62229036-62229055 Msa0742340:CDS 35.0%
! AATACACCTCCCTAACTTTT+CGG - chr5_1:62229345-62229364 None:intergenic 35.0%
CAGCAATGTTTACAGTAGAT+TGG + chr5_1:62229441-62229460 Msa0742340:CDS 35.0%
AAGCAATTCGCATCTTTCAC+AGG + chr5_1:62225723-62225742 Msa0742340:CDS 40.0%
ATGTATTCAGTAAGTCTCGG+AGG + chr5_1:62225901-62225920 Msa0742340:CDS 40.0%
GTCTCAGGTAATCATCTTCA+CGG - chr5_1:62225935-62225954 None:intergenic 40.0%
GTGAAGATGATTACCTGAGA+CGG + chr5_1:62225934-62225953 Msa0742340:CDS 40.0%
!! GCAAAAGCATCATGTCTATC+GGG - chr5_1:62225981-62226000 None:intergenic 40.0%
TGAGAAAACGCTTGATCCTT+CGG + chr5_1:62226010-62226029 Msa0742340:CDS 40.0%
GAAGAAGAAGAAGAAGGAAG+AGG + chr5_1:62226113-62226132 Msa0742340:CDS 40.0%
ATAAATCTCAGCAGAAGAGG+AGG + chr5_1:62226163-62226182 Msa0742340:CDS 40.0%
AGAAAGCTAAGACTTCTGAC+TGG + chr5_1:62226223-62226242 Msa0742340:CDS 40.0%
GAAAGCTAAGACTTCTGACT+GGG + chr5_1:62226224-62226243 Msa0742340:CDS 40.0%
!! TGGTGTCATTGAGTTCGAAT+CGG - chr5_1:62226256-62226275 None:intergenic 40.0%
ATTCGAACTCAATGACACCA+GGG + chr5_1:62226256-62226275 Msa0742340:CDS 40.0%
AGAGTAATTGATGCTACTCC+TGG + chr5_1:62226279-62226298 Msa0742340:CDS 40.0%
GAGTAATTGATGCTACTCCT+GGG + chr5_1:62226280-62226299 Msa0742340:CDS 40.0%
GATCTTTGTCTCTTCGGAAT+TGG - chr5_1:62226417-62226436 None:intergenic 40.0%
CGAAGAGACAAAGATCAAGA+TGG + chr5_1:62226421-62226440 Msa0742340:CDS 40.0%
GGATGAAACACCTACTACTA+TGG + chr5_1:62226443-62226462 Msa0742340:CDS 40.0%
GTTACACTTCCCATAGTAGT+AGG - chr5_1:62226456-62226475 None:intergenic 40.0%
GTATAAGCAGCAGCATGTAA+TGG - chr5_1:62226480-62226499 None:intergenic 40.0%
TTTACAAGGGTCGTTTATGC+CGG + chr5_1:62226554-62226573 Msa0742340:CDS 40.0%
!! CGGAGCAGTATAATTTGTTG+AGG + chr5_1:62226574-62226593 Msa0742340:CDS 40.0%
!! ATAATTTGTTGAGGTGGGAG+AGG + chr5_1:62226583-62226602 Msa0742340:CDS 40.0%
!! TAATTTGTTGAGGTGGGAGA+GGG + chr5_1:62226584-62226603 Msa0742340:CDS 40.0%
TCAAGTTCCTCATCAGTCAA+AGG - chr5_1:62226630-62226649 None:intergenic 40.0%
GATGCTATGTTTCCACAAGA+AGG + chr5_1:62226648-62226667 Msa0742340:CDS 40.0%
! GTTTCCACAAGAAGGGTATA+AGG + chr5_1:62226656-62226675 Msa0742340:CDS 40.0%
TTGGCACATAAGAAACAGGA+GGG - chr5_1:62226689-62226708 None:intergenic 40.0%
ATTGGCACATAAGAAACAGG+AGG - chr5_1:62226690-62226709 None:intergenic 40.0%
!! AAAGCTGTTTTCCTCTGTGT+TGG - chr5_1:62226965-62226984 None:intergenic 40.0%
AAAGTAGGCTGCATAAGCAA+CGG - chr5_1:62227049-62227068 None:intergenic 40.0%
TTATTTCCCTCCCTTCAACA+CGG - chr5_1:62227207-62227226 None:intergenic 40.0%
TCTAATCTCAGTAAAGCTGC+TGG + chr5_1:62227229-62227248 Msa0742340:CDS 40.0%
CTAATCTCAGTAAAGCTGCT+GGG + chr5_1:62227230-62227249 Msa0742340:CDS 40.0%
TTCAAGAAGGGCAATAAAGC+AGG - chr5_1:62227364-62227383 None:intergenic 40.0%
CTGACAAACAGCTTTCAAGA+AGG - chr5_1:62227377-62227396 None:intergenic 40.0%
GTAAAAAGTCATGGCAAGCT+CGG + chr5_1:62227398-62227417 Msa0742340:CDS 40.0%
CTGCTGCACAATCTTAATAC+CGG - chr5_1:62227428-62227447 None:intergenic 40.0%
!! GCTGCGTTTTTGAAAGCAAT+CGG + chr5_1:62227667-62227686 Msa0742340:CDS 40.0%
!! CTGCGTTTTTGAAAGCAATC+GGG + chr5_1:62227668-62227687 Msa0742340:CDS 40.0%
GCATATAAGGCTTCCATCAA+TGG - chr5_1:62227703-62227722 None:intergenic 40.0%
! AGTTTCTGAAAAACTCAGGG+AGG - chr5_1:62227870-62227889 None:intergenic 40.0%
TACGGTTGAGATAGCAAACA+AGG + chr5_1:62227945-62227964 Msa0742340:CDS 40.0%
! GTCAGTGTTGCTGATATTGT+TGG + chr5_1:62227967-62227986 Msa0742340:CDS 40.0%
GGTCATGGAAACAATTGAGA+AGG + chr5_1:62228038-62228057 Msa0742340:intron 40.0%
GATCATCCGATATAGATGCA+CGG + chr5_1:62228176-62228195 Msa0742340:intron 40.0%
TTCCAACCGTGCATCTATAT+CGG - chr5_1:62228185-62228204 None:intergenic 40.0%
CCACAAATCTGAGGAAGATA+TGG - chr5_1:62228322-62228341 None:intergenic 40.0%
CCATATCTTCCTCAGATTTG+TGG + chr5_1:62228319-62228338 Msa0742340:intron 40.0%
CCACAAATCTGAGGAAGATA+TGG - chr5_1:62228322-62228341 None:intergenic 40.0%
CCATATCTTCCTCAGATTTG+TGG + chr5_1:62228319-62228338 Msa0742340:intron 40.0%
TTTGTGGTACTATCAAGTGG+AGG + chr5_1:62228363-62228382 Msa0742340:CDS 40.0%
TGCCATGAGGAACAATTGAT+GGG + chr5_1:62228461-62228480 Msa0742340:CDS 40.0%
! GAACAATTGATGGGTCATCT+TGG + chr5_1:62228470-62228489 Msa0742340:CDS 40.0%
!! GTATCTTGGAGAAGAGTATC+CGG + chr5_1:62228508-62228527 Msa0742340:CDS 40.0%
GAAGATGACTCCACGTATTA+AGG + chr5_1:62228589-62228608 Msa0742340:CDS 40.0%
GGAAGCAAATCCTTAATACG+TGG - chr5_1:62228602-62228621 None:intergenic 40.0%
! GTATTAAGGATTTGCTTCCC+AGG + chr5_1:62228603-62228622 Msa0742340:CDS 40.0%
!! CTTCAAAATTGGTGTCAACC+TGG - chr5_1:62228624-62228643 None:intergenic 40.0%
! GAGAACTGTATTGACCTTGT+GGG + chr5_1:62228665-62228684 Msa0742340:CDS 40.0%
ACAGATCCTTATCCATTCTC+TGG - chr5_1:62228726-62228745 None:intergenic 40.0%
TGAGCTTCTTGAGATGCTTA+AGG + chr5_1:62228748-62228767 Msa0742340:CDS 40.0%
GATGCTTAAGGCACACAAAA+AGG + chr5_1:62228760-62228779 Msa0742340:CDS 40.0%
! ATAATCTCAAGTTGCAGGAG+AGG + chr5_1:62228864-62228883 Msa0742340:intron 40.0%
AGTGCAGGTAAAACTGTGAA+GGG - chr5_1:62228944-62228963 None:intergenic 40.0%
! CCATTTTGCACATTAAGCTC+TGG - chr5_1:62228986-62229005 None:intergenic 40.0%
CCAGAGCTTAATGTGCAAAA+TGG + chr5_1:62228983-62229002 Msa0742340:CDS 40.0%
!! ATAAGAGCATCCTCAAGCAA+AGG - chr5_1:62229082-62229101 None:intergenic 40.0%
TTTGCTTGAGGATGCTCTTA+TGG + chr5_1:62229081-62229100 Msa0742340:CDS 40.0%
! TCCATTTGCTGAACTATGTC+TGG + chr5_1:62229194-62229213 Msa0742340:CDS 40.0%
GTTCTTAGTTACTGTCTCCA+AGG + chr5_1:62229304-62229323 Msa0742340:CDS 40.0%
! ATACACCTCCCTAACTTTTC+GGG - chr5_1:62229344-62229363 None:intergenic 40.0%
! GAAAAGTTAGGGAGGTGTAT+TGG + chr5_1:62229344-62229363 Msa0742340:CDS 40.0%
ATCCAGAAGACGCAAGAAGT+TGG + chr5_1:62225698-62225717 Msa0742340:CDS 45.0%
TTCCAACTTCTTGCGTCTTC+TGG - chr5_1:62225703-62225722 None:intergenic 45.0%
TCTTCGGTAGCAGGAATTGA+AGG - chr5_1:62225801-62225820 None:intergenic 45.0%
TCTTCTTCTTCTTCGGTAGC+AGG - chr5_1:62225810-62225829 None:intergenic 45.0%
ACCTGAGACGGAGATTGAAT+CGG + chr5_1:62225946-62225965 Msa0742340:CDS 45.0%
AAACGCTTGATCCTTCGGTT+AGG + chr5_1:62226015-62226034 Msa0742340:intron 45.0%
TCAGCATAAGTCCTAACCGA+AGG - chr5_1:62226029-62226048 None:intergenic 45.0%
! AGCGTTGAAGAGAGAGAAAG+AGG + chr5_1:62226068-62226087 Msa0742340:CDS 45.0%
AAGAAGGAAGAGGAAGAAGC+CGG + chr5_1:62226123-62226142 Msa0742340:CDS 45.0%
TAGATGTGATCAGAATCGGG+AGG + chr5_1:62226188-62226207 Msa0742340:CDS 45.0%
!! GGTGTCATTGAGTTCGAATC+GGG - chr5_1:62226255-62226274 None:intergenic 45.0%
GATTCGAACTCAATGACACC+AGG + chr5_1:62226255-62226274 Msa0742340:CDS 45.0%
GTAGCATCAATTACTCTCCC+TGG - chr5_1:62226276-62226295 None:intergenic 45.0%
TAATTGATGCTACTCCTGGG+AGG + chr5_1:62226283-62226302 Msa0742340:CDS 45.0%
TCAGAATCAACCAATCTCCC+AGG - chr5_1:62226336-62226355 None:intergenic 45.0%
! GTTGATTCTGATGCTACTCC+TGG + chr5_1:62226345-62226364 Msa0742340:CDS 45.0%
TACTCCTGGTGGTACAACTT+GGG + chr5_1:62226359-62226378 Msa0742340:CDS 45.0%
GATGCTACTCCTAAGCTTTC+TGG + chr5_1:62226381-62226400 Msa0742340:CDS 45.0%
!! TCCTGTTGGTGGTGTTGAAT+TGG + chr5_1:62226512-62226531 Msa0742340:CDS 45.0%
CAACACCTGGTGCTTTACAA+GGG + chr5_1:62226541-62226560 Msa0742340:CDS 45.0%
GAATCGTCCTTTGACTGATG+AGG + chr5_1:62226620-62226639 Msa0742340:CDS 45.0%
TTCCTTGCAGGTGTCCTAAT+TGG - chr5_1:62226708-62226727 None:intergenic 45.0%
CAGATTCCAGAAGAGAATCG+CGG + chr5_1:62226767-62226786 Msa0742340:CDS 45.0%
GATGTTCCTAAAGAAGCTCC+TGG + chr5_1:62226800-62226819 Msa0742340:CDS 45.0%
AAACCACCAGGAGCTTCTTT+AGG - chr5_1:62226809-62226828 None:intergenic 45.0%
TTCATGAAAGGCAAACCACC+AGG - chr5_1:62226821-62226840 None:intergenic 45.0%
GTTGAATGACGAGAACGAAG+AGG + chr5_1:62226871-62226890 Msa0742340:CDS 45.0%
CACAGAGGAAAACAGCTTTG+AGG + chr5_1:62226966-62226985 Msa0742340:CDS 45.0%
! TTTGAGGCAGCTAACTGACA+AGG + chr5_1:62226982-62227001 Msa0742340:CDS 45.0%
!! GCATAAGCAACGGAAGTATC+TGG - chr5_1:62227039-62227058 None:intergenic 45.0%
GTTGCTTATGCAGCCTACTT+TGG + chr5_1:62227048-62227067 Msa0742340:CDS 45.0%
!! GGACCAAGAGAGGCATATTT+TGG + chr5_1:62227072-62227091 Msa0742340:CDS 45.0%
ACTACTATGCCCGTGTTGAA+GGG + chr5_1:62227194-62227213 Msa0742340:CDS 45.0%
TATTTCCCTCCCTTCAACAC+GGG - chr5_1:62227206-62227225 None:intergenic 45.0%
GTTATCTATGTCAGGCCTCA+TGG - chr5_1:62227275-62227294 None:intergenic 45.0%
! AGTGTTGTTGCATCTGCTCT+TGG + chr5_1:62227334-62227353 Msa0742340:CDS 45.0%
TATTAGGCAACACCGTGGTA+AGG + chr5_1:62227639-62227658 Msa0742340:CDS 45.0%
!! AAACAGTGTGTGAGCACTGA+GGG + chr5_1:62227814-62227833 Msa0742340:CDS 45.0%
! TCAGAAACTTCTGGGTTAGG+AGG + chr5_1:62227881-62227900 Msa0742340:CDS 45.0%
! AAACTTCTGGGTTAGGAGGA+TGG + chr5_1:62227885-62227904 Msa0742340:CDS 45.0%
CAAGCAACTTGTGGAGACTA+CGG + chr5_1:62227927-62227946 Msa0742340:CDS 45.0%
GAGTGAACCTTACAGACGAA+TGG + chr5_1:62228017-62228036 Msa0742340:intron 45.0%
ACCTTACAGACGAATGGTCA+TGG + chr5_1:62228023-62228042 Msa0742340:intron 45.0%
TCCATGACCATTCGTCTGTA+AGG - chr5_1:62228027-62228046 None:intergenic 45.0%
ATCCGATATAGATGCACGGT+TGG + chr5_1:62228180-62228199 Msa0742340:intron 45.0%
! ACAATAAGAGCGCAAAGGTG+AGG + chr5_1:62228390-62228409 Msa0742340:CDS 45.0%
CAACAGCAATCCTCGAAATG+AGG - chr5_1:62228430-62228449 None:intergenic 45.0%
GTGCCATGAGGAACAATTGA+TGG + chr5_1:62228460-62228479 Msa0742340:CDS 45.0%
GACCCATCAATTGTTCCTCA+TGG - chr5_1:62228466-62228485 None:intergenic 45.0%
!! GAAGAGTATCCGGAAGTTCT+AGG + chr5_1:62228518-62228537 Msa0742340:CDS 45.0%
GAATAGGCATGAGAAAGTCC+AGG + chr5_1:62228643-62228662 Msa0742340:CDS 45.0%
CAAGGTCAATACAGTTCTCC+TGG - chr5_1:62228664-62228683 None:intergenic 45.0%
! GGAGAACTGTATTGACCTTG+TGG + chr5_1:62228664-62228683 Msa0742340:CDS 45.0%
! ACTGTATTGACCTTGTGGGT+AGG + chr5_1:62228669-62228688 Msa0742340:CDS 45.0%
AGTTTGTACCTGCCAGAGAA+TGG + chr5_1:62228711-62228730 Msa0742340:CDS 45.0%
TACCTGCCAGAGAATGGATA+AGG + chr5_1:62228717-62228736 Msa0742340:CDS 45.0%
ATCCTTATCCATTCTCTGGC+AGG - chr5_1:62228722-62228741 None:intergenic 45.0%
AGAGCTACTGTGAACACCTT+TGG + chr5_1:62228791-62228810 Msa0742340:intron 45.0%
AGAGTTGCCAAGACATCCTA+TGG - chr5_1:62228839-62228858 None:intergenic 45.0%
GAATCGTGTATGCACTACTG+TGG + chr5_1:62228889-62228908 Msa0742340:CDS 45.0%
CAGTGCAGGTAAAACTGTGA+AGG - chr5_1:62228945-62228964 None:intergenic 45.0%
TTGAGGATGCTCTTATGGAC+AGG + chr5_1:62229086-62229105 Msa0742340:CDS 45.0%
TGAGGATGCTCTTATGGACA+GGG + chr5_1:62229087-62229106 Msa0742340:CDS 45.0%
TGCTCTTATGGACAGGGATT+TGG + chr5_1:62229093-62229112 Msa0742340:CDS 45.0%
! TGGACAGGGATTTGGTTCAT+AGG + chr5_1:62229101-62229120 Msa0742340:CDS 45.0%
GCCAGACATAGTTCAGCAAA+TGG - chr5_1:62229198-62229217 None:intergenic 45.0%
! CTGTGATGGAAGCCATTGAA+GGG + chr5_1:62229254-62229273 Msa0742340:CDS 45.0%
AAGAACAACAGCAGAACCCA+AGG - chr5_1:62229290-62229309 None:intergenic 45.0%
CTCACTGTATATTGGAGCTC+AGG + chr5_1:62229378-62229397 Msa0742340:CDS 45.0%
TGTGCTCATCCTCTAGTGAA+GGG - chr5_1:62229423-62229442 None:intergenic 45.0%
! TAAAGATCGGCGTCGAAGGT+GGG - chr5_1:62225750-62225769 None:intergenic 50.0%
! TGTTTCTGCGAGAAGCTTCG+TGG - chr5_1:62225842-62225861 None:intergenic 50.0%
TCCGATTCAATCTCCGTCTC+AGG - chr5_1:62225950-62225969 None:intergenic 50.0%
! CATGATGCTTTTGCTGCTGC+TGG + chr5_1:62225987-62226006 Msa0742340:CDS 50.0%
ATTATCCTTCTCCAGCGCAC+CGG - chr5_1:62226145-62226164 None:intergenic 50.0%
TGTGATCAGAATCGGGAGGA+AGG + chr5_1:62226192-62226211 Msa0742340:CDS 50.0%
TCAACCAATCTCCCAGGTGT+CGG - chr5_1:62226330-62226349 None:intergenic 50.0%
GATTCTGATGCTACTCCTGG+TGG + chr5_1:62226348-62226367 Msa0742340:CDS 50.0%
CTACTCCTGGTGGTACAACT+TGG + chr5_1:62226358-62226377 Msa0742340:CDS 50.0%
GCTACTCCTAAGCTTTCTGG+CGG + chr5_1:62226384-62226403 Msa0742340:CDS 50.0%
! CTACTCCTAAGCTTTCTGGC+GGG + chr5_1:62226385-62226404 Msa0742340:CDS 50.0%
! TACTCCTAAGCTTTCTGGCG+GGG + chr5_1:62226386-62226405 Msa0742340:CDS 50.0%
! CATGCTGCTGCTTATACACC+AGG + chr5_1:62226483-62226502 Msa0742340:CDS 50.0%
!! ACACCAGGTGTTACTCCTGT+TGG + chr5_1:62226498-62226517 Msa0742340:CDS 50.0%
GCCAATTCAACACCACCAAC+AGG - chr5_1:62226516-62226535 None:intergenic 50.0%
GAATTGGCTACTCCAACACC+TGG + chr5_1:62226528-62226547 Msa0742340:CDS 50.0%
! CCTTGTAAAGCACCAGGTGT+TGG - chr5_1:62226543-62226562 None:intergenic 50.0%
CCAACACCTGGTGCTTTACA+AGG + chr5_1:62226540-62226559 Msa0742340:CDS 50.0%
! AACGACCCTTGTAAAGCACC+AGG - chr5_1:62226549-62226568 None:intergenic 50.0%
GGGAGAGGGATATTGAAGAG+AGG + chr5_1:62226598-62226617 Msa0742340:CDS 50.0%
TGCCAATTAGGACACCTGCA+AGG + chr5_1:62226703-62226722 Msa0742340:intron 50.0%
GTAGCAAGAAGCTTCCTTGC+AGG - chr5_1:62226720-62226739 None:intergenic 50.0%
CTGATAAAGCGAGTCCCCAA+AGG - chr5_1:62226750-62226769 None:intergenic 50.0%
GTTCCTAAAGAAGCTCCTGG+TGG + chr5_1:62226803-62226822 Msa0742340:CDS 50.0%
GAACGAAGAGGAGTTGTCTC+TGG + chr5_1:62226883-62226902 Msa0742340:CDS 50.0%
ACTGACAAGGCTTGCGAGTT+TGG + chr5_1:62226995-62227014 Msa0742340:CDS 50.0%
GCTTATGCAGCCTACTTTGG+AGG + chr5_1:62227051-62227070 Msa0742340:CDS 50.0%
CTCTCTTGGTCCTCCAAAGT+AGG - chr5_1:62227064-62227083 None:intergenic 50.0%
! CTACTTTGGAGGACCAAGAG+AGG + chr5_1:62227062-62227081 Msa0742340:CDS 50.0%
GACTACTATGCCCGTGTTGA+AGG + chr5_1:62227193-62227212 Msa0742340:CDS 50.0%
TCTCAGTAAAGCTGCTGGGT+TGG + chr5_1:62227234-62227253 Msa0742340:CDS 50.0%
CCTCATGGCAGCAATCATAG+TGG - chr5_1:62227260-62227279 None:intergenic 50.0%
CCACTATGATTGCTGCCATG+AGG + chr5_1:62227257-62227276 Msa0742340:CDS 50.0%
! ACTCAGTGTTGAAGCCACTG+TGG + chr5_1:62227611-62227630 Msa0742340:CDS 50.0%
! AGTGTTGAAGCCACTGTGGA+AGG + chr5_1:62227615-62227634 Msa0742340:CDS 50.0%
GTGTTGAAGCCACTGTGGAA+GGG + chr5_1:62227616-62227635 Msa0742340:CDS 50.0%
!! AGCCACTGTGGAAGGGTATT+AGG + chr5_1:62227623-62227642 Msa0742340:CDS 50.0%
TGCCTAATACCCTTCCACAG+TGG - chr5_1:62227628-62227647 None:intergenic 50.0%
!! AAGGGTATTAGGCAACACCG+TGG + chr5_1:62227634-62227653 Msa0742340:CDS 50.0%
! GAAACAGTGTGTGAGCACTG+AGG + chr5_1:62227813-62227832 Msa0742340:CDS 50.0%
ATCGCTGATCTGCTCTTGGA+AGG - chr5_1:62228236-62228255 None:intergenic 50.0%
CATCATCGCTGATCTGCTCT+TGG - chr5_1:62228240-62228259 None:intergenic 50.0%
AAGCAGCAGACCTCATTTCG+AGG + chr5_1:62228417-62228436 Msa0742340:CDS 50.0%
TGTCATGAAGCAGTGCCATG+AGG + chr5_1:62228448-62228467 Msa0742340:CDS 50.0%
GATCAGCAATCCTACCCACA+AGG - chr5_1:62228682-62228701 None:intergenic 50.0%
TGGGTAGGATTGCTGATCGT+GGG + chr5_1:62228684-62228703 Msa0742340:CDS 50.0%
TGCAAAAGCCATCGGACCAT+AGG + chr5_1:62228820-62228839 Msa0742340:intron 50.0%
CAAGACATCCTATGGTCCGA+TGG - chr5_1:62228831-62228850 None:intergenic 50.0%
CATCGGACCATAGGATGTCT+TGG + chr5_1:62228829-62228848 Msa0742340:intron 50.0%
CGATACTCGTTCATCAGTGC+AGG - chr5_1:62228959-62228978 None:intergenic 50.0%
TGCTGTGACTCCTTTGCTTG+AGG + chr5_1:62229069-62229088 Msa0742340:CDS 50.0%
TGCATCTGCTGTGAAGCACA+TGG + chr5_1:62229132-62229151 Msa0742340:CDS 50.0%
!! TTTGGGTTCTGAAGATGCGC+TGG + chr5_1:62229171-62229190 Msa0742340:CDS 50.0%
! GCTGTGATGGAAGCCATTGA+AGG + chr5_1:62229253-62229272 Msa0742340:CDS 50.0%
TGGAAGCCATTGAAGGGATG+AGG + chr5_1:62229260-62229279 Msa0742340:CDS 50.0%
GGAAGCCATTGAAGGGATGA+GGG + chr5_1:62229261-62229280 Msa0742340:CDS 50.0%
TGCAGCATACCCTTCACTAG+AGG + chr5_1:62229411-62229430 Msa0742340:CDS 50.0%
CTGTGCTCATCCTCTAGTGA+AGG - chr5_1:62229424-62229443 None:intergenic 50.0%
! GTAAAGATCGGCGTCGAAGG+TGG - chr5_1:62225751-62225770 None:intergenic 55.0%
! GCTGTAAAGATCGGCGTCGA+AGG - chr5_1:62225754-62225773 None:intergenic 55.0%
GATCAGAATCGGGAGGAAGG+TGG + chr5_1:62226195-62226214 Msa0742340:CDS 55.0%
TTGATGCTACTCCTGGGAGG+AGG + chr5_1:62226286-62226305 Msa0742340:CDS 55.0%
CTACTCCTGGGAGGAGGAAT+AGG + chr5_1:62226292-62226311 Msa0742340:CDS 55.0%
TCCTGGGAGGAGGAATAGGT+GGG + chr5_1:62226296-62226315 Msa0742340:CDS 55.0%
GCATCCCAAGTTGTACCACC+AGG - chr5_1:62226366-62226385 None:intergenic 55.0%
GTAACCCCGCCAGAAAGCTT+AGG - chr5_1:62226393-62226412 None:intergenic 55.0%
CCACCAACAGGAGTAACACC+TGG - chr5_1:62226504-62226523 None:intergenic 55.0%
!! CCAGGTGTTACTCCTGTTGG+TGG + chr5_1:62226501-62226520 Msa0742340:CDS 55.0%
TCTTGCTACGCCTACGCCTT+TGG + chr5_1:62226731-62226750 Msa0742340:CDS 55.0%
CTTGCTACGCCTACGCCTTT+GGG + chr5_1:62226732-62226751 Msa0742340:CDS 55.0%
TTGCTACGCCTACGCCTTTG+GGG + chr5_1:62226733-62226752 Msa0742340:CDS 55.0%
TGCTGACCGCGATTCTCTTC+TGG - chr5_1:62226776-62226795 None:intergenic 55.0%
AGAACGGTACGCCAACACAG+AGG + chr5_1:62226951-62226970 Msa0742340:CDS 55.0%
!! AAGGCTTGCGAGTTTGGTGC+TGG + chr5_1:62227001-62227020 Msa0742340:CDS 55.0%
ACTATGCCCGTGTTGAAGGG+AGG + chr5_1:62227197-62227216 Msa0742340:CDS 55.0%
CTATGCCCGTGTTGAAGGGA+GGG + chr5_1:62227198-62227217 Msa0742340:CDS 55.0%
! CTGGGTTAGGAGGATGGCTT+TGG + chr5_1:62227891-62227910 Msa0742340:CDS 55.0%
GGCGCCATTGTAAACTCGCT+CGG + chr5_1:62228283-62228302 Msa0742340:intron 55.0%
GCGCCATTGTAAACTCGCTC+GGG + chr5_1:62228284-62228303 Msa0742340:intron 55.0%
CTGCCCGAGCGAGTTTACAA+TGG - chr5_1:62228290-62228309 None:intergenic 55.0%
GTGGGTAGGATTGCTGATCG+TGG + chr5_1:62228683-62228702 Msa0742340:CDS 55.0%
GGGTAGGATTGCTGATCGTG+GGG + chr5_1:62228685-62228704 Msa0742340:CDS 55.0%
TGCTGTGAAGCACATGGCAC+TGG + chr5_1:62229138-62229157 Msa0742340:CDS 55.0%
GCTGTGAAGCACATGGCACT+GGG + chr5_1:62229139-62229158 Msa0742340:CDS 55.0%
CTGTGAAGCACATGGCACTG+GGG + chr5_1:62229140-62229159 Msa0742340:CDS 55.0%
! TGTGAAGCACATGGCACTGG+GGG + chr5_1:62229141-62229160 Msa0742340:CDS 55.0%
GGCTACCCTCATCCCTTCAA+TGG - chr5_1:62229269-62229288 None:intergenic 55.0%
TGAAGGGATGAGGGTAGCCT+TGG + chr5_1:62229270-62229289 Msa0742340:CDS 55.0%
GAAGGGATGAGGGTAGCCTT+GGG + chr5_1:62229271-62229290 Msa0742340:CDS 55.0%
TCCACCCTGCCCGAAAAGTT+AGG + chr5_1:62229332-62229351 Msa0742340:CDS 55.0%
CCACCCTGCCCGAAAAGTTA+GGG + chr5_1:62229333-62229352 Msa0742340:CDS 55.0%
!! CCTCCCTAACTTTTCGGGCA+GGG - chr5_1:62229339-62229358 None:intergenic 55.0%
!! ACCTCCCTAACTTTTCGGGC+AGG - chr5_1:62229340-62229359 None:intergenic 55.0%
CTCCTGGGAGGAGGAATAGG+TGG + chr5_1:62226295-62226314 Msa0742340:CDS 60.0%
TCCCACCTATTCCTCCTCCC+AGG - chr5_1:62226300-62226319 None:intergenic 60.0%
TGGGATGAGACACCGACACC+TGG + chr5_1:62226315-62226334 Msa0742340:CDS 60.0%
GGGATGAGACACCGACACCT+GGG + chr5_1:62226316-62226335 Msa0742340:CDS 60.0%
GACACCGACACCTGGGAGAT+TGG + chr5_1:62226323-62226342 Msa0742340:CDS 60.0%
! AAGCGAGTCCCCAAAGGCGT+AGG - chr5_1:62226744-62226763 None:intergenic 60.0%
TCATGGCAAGCTCGGCACAC+CGG + chr5_1:62227406-62227425 Msa0742340:CDS 60.0%
GTCTCTTGCCGCTCTTGCTG+AGG + chr5_1:62227558-62227577 Msa0742340:CDS 60.0%
AGCAGCAGCCTCAGCAAGAG+CGG - chr5_1:62227569-62227588 None:intergenic 60.0%
GCTGAGGCTGCTGCTCCTTA+CGG + chr5_1:62227574-62227593 Msa0742340:CDS 60.0%
GCAACACCGTGGTAAGGTGC+TGG + chr5_1:62227645-62227664 Msa0742340:CDS 60.0%
ACGCAGCCAGCACCTTACCA+CGG - chr5_1:62227654-62227673 None:intergenic 60.0%
!! GTGTGTGAGCACTGAGGGTG+TGG + chr5_1:62227819-62227838 Msa0742340:CDS 60.0%
!! CCCTAACTTTTCGGGCAGGG+TGG - chr5_1:62229336-62229355 None:intergenic 60.0%
CCCTGCCCGAAAAGTTAGGG+AGG + chr5_1:62229336-62229355 Msa0742340:CDS 60.0%
AGAGGAAGAAGCCGGTGCGC+TGG + chr5_1:62226131-62226150 Msa0742340:CDS 65.0%
AGAAGCCGGTGCGCTGGAGA+AGG + chr5_1:62226137-62226156 Msa0742340:CDS 65.0%
! GAAGCACATGGCACTGGGGG+TGG + chr5_1:62229144-62229163 Msa0742340:CDS 65.0%
!! GCACTGGGGGTGGCTGGTTT+GGG + chr5_1:62229154-62229173 Msa0742340:CDS 65.0%
GGGCAGGGTGGAACAGTCCT+TGG - chr5_1:62229324-62229343 None:intergenic 65.0%
! CACATGGCACTGGGGGTGGC+TGG + chr5_1:62229148-62229167 Msa0742340:CDS 70.0%
! GGCACTGGGGGTGGCTGGTT+TGG + chr5_1:62229153-62229172 Msa0742340:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 62225693 62229483 62225693 ID=Msa0742340;Name=Msa0742340
chr5_1 mRNA 62225693 62229483 62225693 ID=Msa0742340-mRNA-1;Parent=Msa0742340;Name=Msa0742340-mRNA-1;_AED=0.15;_eAED=0.16;_QI=0|0|0|1|1|1|6|0|1134
chr5_1 exon 62225693 62226031 62225693 ID=Msa0742340-mRNA-1:exon:18231;Parent=Msa0742340-mRNA-1
chr5_1 exon 62226060 62226677 62226060 ID=Msa0742340-mRNA-1:exon:18232;Parent=Msa0742340-mRNA-1
chr5_1 exon 62226713 62228018 62226713 ID=Msa0742340-mRNA-1:exon:18233;Parent=Msa0742340-mRNA-1
chr5_1 exon 62228191 62228291 62228191 ID=Msa0742340-mRNA-1:exon:18234;Parent=Msa0742340-mRNA-1
chr5_1 exon 62228362 62228799 62228362 ID=Msa0742340-mRNA-1:exon:18235;Parent=Msa0742340-mRNA-1
chr5_1 exon 62228881 62229483 62228881 ID=Msa0742340-mRNA-1:exon:18236;Parent=Msa0742340-mRNA-1
chr5_1 CDS 62225693 62226031 62225693 ID=Msa0742340-mRNA-1:cds;Parent=Msa0742340-mRNA-1
chr5_1 CDS 62226060 62226677 62226060 ID=Msa0742340-mRNA-1:cds;Parent=Msa0742340-mRNA-1
chr5_1 CDS 62226713 62228018 62226713 ID=Msa0742340-mRNA-1:cds;Parent=Msa0742340-mRNA-1
chr5_1 CDS 62228191 62228291 62228191 ID=Msa0742340-mRNA-1:cds;Parent=Msa0742340-mRNA-1
chr5_1 CDS 62228362 62228799 62228362 ID=Msa0742340-mRNA-1:cds;Parent=Msa0742340-mRNA-1
chr5_1 CDS 62228881 62229483 62228881 ID=Msa0742340-mRNA-1:cds;Parent=Msa0742340-mRNA-1
Gene Sequence

>Msa0742340

ATGAAATCCAGAAGACGCAAGAAGTTGGAAAAGCAATTCGCATCTTTCACAGGACCCACCTTCGACGCCGATCTTTACAGCGATAACGATAAAGCTTCATGCTATCCTTCAATTCCTGCTACCGAAGAAGAAGAAGAAGACAATCTCCACGAAGCTTCTCGCAGAAACAACTCGTCATTCTTTGTTCCGATCGTCAATCCTAATGATGATGTATTCAGTAAGTCTCGGAGGATAATTGACCGTGAAGATGATTACCTGAGACGGAGATTGAATCGGATTCTTTCGCCCGATAGACATGATGCTTTTGCTGCTGCTGGTGAGAAAACGCTTGATCCTTCGATGGATGAAGCGTTGAAGAGAGAGAAAGAGGAAACACTGAGAGCAATTTCCAAGAAGAAGAAGAAGAAGGAAGAGGAAGAAGCCGGTGCGCTGGAGAAGGATAATAAATCTCAGCAGAAGAGGAGGAATAGATGTGATCAGAATCGGGAGGAAGGTGGTGTCAAGAAAGCTAAGACTTCTGACTGGGATGCACCCGATTCGAACTCAATGACACCAGGGAGAGTAATTGATGCTACTCCTGGGAGGAGGAATAGGTGGGATGAGACACCGACACCTGGGAGATTGGTTGATTCTGATGCTACTCCTGGTGGTACAACTTGGGATGCTACTCCTAAGCTTTCTGGCGGGGTTACTCCAATTCCGAAGAGACAAAGATCAAGATGGGATGAAACACCTACTACTATGGGAAGTGTAACACCATTACATGCTGCTGCTTATACACCAGGTGTTACTCCTGTTGGTGGTGTTGAATTGGCTACTCCAACACCTGGTGCTTTACAAGGGTCGTTTATGCCGGAGCAGTATAATTTGTTGAGGTGGGAGAGGGATATTGAAGAGAGGAATCGTCCTTTGACTGATGAGGAACTTGATGCTATGTTTCCACAAGAAGGGTATAAGGACACCTGCAAGGAAGCTTCTTGCTACGCCTACGCCTTTGGGGACTCGCTTTATCAGATTCCAGAAGAGAATCGCGGTCAGCAGTTTGATGTTCCTAAAGAAGCTCCTGGTGGTTTGCCTTTCATGAAACCTGAAGATTATCAGTATTTTGGGGCTTTGTTGAATGACGAGAACGAAGAGGAGTTGTCTCTGGATGATCAGAAAGAGAGAAAGATTATGAAGCTTCTTCTTAAAGTGAAGAACGGTACGCCAACACAGAGGAAAACAGCTTTGAGGCAGCTAACTGACAAGGCTTGCGAGTTTGGTGCTGGTCCTTTGTTTAACCAGATACTTCCGTTGCTTATGCAGCCTACTTTGGAGGACCAAGAGAGGCATATTTTGGTTAAGGTAATTGATAGAGTTCTTTATAAATTGGATGAATTGGTTCGACCTTATGTGCATAAGATTCTTGTTGTTATTGAGCCCCTTTTGATTGACGAAGACTACTATGCCCGTGTTGAAGGGAGGGAAATAATATCTAATCTCAGTAAAGCTGCTGGGTTGGCCACTATGATTGCTGCCATGAGGCCTGACATAGATAACATTGATGAATATGTTAGGAATACTACTGCTAGAGCATTCAGTGTTGTTGCATCTGCTCTTGGTATTCCTGCTTTATTGCCCTTCTTGAAAGCTGTTTGTCAGAGTAAAAAGTCATGGCAAGCTCGGCACACCGGTATTAAGATTGTGCAGCAGATTGCTATTTTGATTGGCTGTGCTGTGTTGCCCCATCTCAGATCTCTTTTTGAAATTATAGCGCATGGTTTGAATGATGAGAATCAGAAGGTGAGAACAATTACTGCTTTGTCTCTTGCCGCTCTTGCTGAGGCTGCTGCTCCTTACGGTATTGAAAGTTTTGACTCAGTGTTGAAGCCACTGTGGAAGGGTATTAGGCAACACCGTGGTAAGGTGCTGGCTGCGTTTTTGAAAGCAATCGGGTTTATTATTCCATTGATGGAAGCCTTATATGCCAGCTATTATACTAAGGAAGTTATGCTTATTCTAATTCGGGAGTTTCAGTCACCCGATGAAGAAATGAAGAAAATTGTTCTGAAAGTGGTGAAACAGTGTGTGAGCACTGAGGGTGTGGAAGCTGAGTATATTAGAACTGATATCCTCCCTGAGTTTTTCAGAAACTTCTGGGTTAGGAGGATGGCTTTGGATAGAAGAAACTACAAGCAACTTGTGGAGACTACGGTTGAGATAGCAAACAAGGTCAGTGTTGCTGATATTGTTGGAAGAATCGTTGAAGATCTTAAAGATGAGAATGCACGGTTGGAAGAGCTTTTGATTGATGGTATTCTTTATGCCTTCCAAGAGCAGATCAGCGATGATGTTAATGTGATGCTTAATGGGTTTGGCGCCATTATTTGTGGTACTATCAAGTGGAGGTTAAACAATAAGAGCGCAAAGGTGAGGCAGCAAGCAGCAGACCTCATTTCGAGGATTGCTGTTGTCATGAAGCAGTGCCATGAGGAACAATTGATGGGTCATCTTGGTGTTGTCTTGTATGAGTATCTTGGAGAAGAGTATCCGGAAGTTCTAGGTTCAATTTTGGGTGCTCTCAAGTCAATTGTTAATGTTATCGGTATGACGAAGATGACTCCACGTATTAAGGATTTGCTTCCCAGGTTGACACCAATTTTGAAGAATAGGCATGAGAAAGTCCAGGAGAACTGTATTGACCTTGTGGGTAGGATTGCTGATCGTGGGGCTGAGTTTGTACCTGCCAGAGAATGGATAAGGATCTGTTTTGAGCTTCTTGAGATGCTTAAGGCACACAAAAAGGGAATTCGTAGAGCTACTGAGAGGCAGAATCGTGTATGCACTACTGTGGCCATTGCTATTGTTGCAGAAACATGTTCACCCTTCACAGTTTTACCTGCACTGATGAACGAGTATCGTGTACCAGAGCTTAATGTGCAAAATGGTGTGCTCAAATCTCTTTCTTTCCTCTTTGAGTATATTGGTGAAATGGGAAAGGACTACATCTATGCTGTGACTCCTTTGCTTGAGGATGCTCTTATGGACAGGGATTTGGTTCATAGGCAGACAGCTGCATCTGCTGTGAAGCACATGGCACTGGGGGTGGCTGGTTTGGGTTCTGAAGATGCGCTGGTCCATTTGCTGAACTATGTCTGGCCAAACATATTTGAAACTTCTCCACATGTTATAAATGCTGTGATGGAAGCCATTGAAGGGATGAGGGTAGCCTTGGGTTCTGCTGTTGTTCTTAGTTACTGTCTCCAAGGACTGTTCCACCCTGCCCGAAAAGTTAGGGAGGTGTATTGGAAGATTTATAACTCACTGTATATTGGAGCTCAGGATGCTCTTGTTGCAGCATACCCTTCACTAGAGGATGAGCACAGCAATGTTTACAGTAGATTGGAGTTGATGATTTTTATTTAG
Protein sequence

>Msa0742340

MKSRRRKKLEKQFASFTGPTFDADLYSDNDKASCYPSIPATEEEEEDNLHEASRRNNSSFFVPIVNPNDDVFSKSRRIIDREDDYLRRRLNRILSPDRHDAFAAAGEKTLDPSMDEALKREKEETLRAISKKKKKKEEEEAGALEKDNKSQQKRRNRCDQNREEGGVKKAKTSDWDAPDSNSMTPGRVIDATPGRRNRWDETPTPGRLVDSDATPGGTTWDATPKLSGGVTPIPKRQRSRWDETPTTMGSVTPLHAAAYTPGVTPVGGVELATPTPGALQGSFMPEQYNLLRWERDIEERNRPLTDEELDAMFPQEGYKDTCKEASCYAYAFGDSLYQIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNDENEEELSLDDQKERKIMKLLLKVKNGTPTQRKTALRQLTDKACEFGAGPLFNQILPLLMQPTLEDQERHILVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLFEIIAHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIPLMEALYASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRTDILPEFFRNFWVRRMALDRRNYKQLVETTVEIANKVSVADIVGRIVEDLKDENARLEELLIDGILYAFQEQISDDVNVMLNGFGAIICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKSIVNVIGMTKMTPRIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWIRICFELLEMLKAHKKGIRRATERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGSEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGSAVVLSYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPSLEDEHSNVYSRLELMIFI*