AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0744600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0744600 MtrunA17_Chr5g0447901 91.304 322 24 3 1 320 1 320 0.0 600
Msa0744600 MtrunA17_Chr2g0307811 63.939 391 135 2 4 389 2 391 0.0 513
Msa0744600 MtrunA17_Chr2g0307831 62.404 391 141 2 4 389 2 391 4.16e-180 507
Msa0744600 MtrunA17_Chr2g0307821 62.404 391 141 2 4 389 2 391 4.16e-180 507
Msa0744600 MtrunA17_Chr8g0348981 39.541 392 224 7 10 389 7 397 9.19e-87 268
Msa0744600 MtrunA17_Chr1g0195221 41.067 375 195 11 26 384 34 398 2.34e-83 260
Msa0744600 MtrunA17_Chr7g0230891 36.702 376 232 4 5 378 15 386 2.95e-83 259
Msa0744600 MtrunA17_Chr4g0067631 40.327 367 208 7 26 384 51 414 3.63e-81 255
Msa0744600 MtrunA17_Chr2g0303941 38.211 369 217 7 12 377 16 376 3.13e-78 246
Msa0744600 MtrunA17_Chr4g0043431 38.757 338 203 4 39 375 49 383 8.83e-77 243
Msa0744600 MtrunA17_Chr2g0295451 40.924 303 168 7 26 320 52 351 1.66e-72 231
Msa0744600 MtrunA17_Chr1g0173451 34.577 402 244 11 2 394 49 440 1.44e-71 231
Msa0744600 MtrunA17_Chr2g0330221 54.450 191 87 0 5 195 3 193 5.21e-71 221
Msa0744600 MtrunA17_Chr2g0332801 35.014 357 222 7 25 375 60 412 2.10e-69 225
Msa0744600 MtrunA17_Chr5g0425811 38.889 270 158 3 43 311 3 266 8.57e-68 216
Msa0744600 MtrunA17_Chr3g0121881 37.363 364 207 11 27 379 33 386 9.85e-68 219
Msa0744600 MtrunA17_Chr6g0449961 38.109 349 200 11 22 364 40 378 1.23e-66 217
Msa0744600 MtrunA17_Chr4g0043661 36.090 399 220 13 11 388 6 390 1.39e-66 216
Msa0744600 MtrunA17_Chr2g0291841 37.386 329 201 5 58 384 29 354 2.12e-66 215
Msa0744600 MtrunA17_Chr4g0020771 35.200 375 228 10 26 390 73 442 3.27e-66 217
Msa0744600 MtrunA17_Chr7g0270361 35.127 353 212 9 26 364 66 415 1.63e-64 213
Msa0744600 MtrunA17_Chr6g0461181 33.902 410 213 12 25 387 31 429 2.05e-64 212
Msa0744600 MtrunA17_Chr4g0052621 35.411 353 210 8 26 364 64 412 3.42e-64 212
Msa0744600 MtrunA17_Chr5g0413141 37.465 355 202 8 23 364 55 402 5.29e-64 211
Msa0744600 MtrunA17_Chr8g0365901 33.509 379 238 8 26 394 64 438 5.31e-63 209
Msa0744600 MtrunA17_Chr1g0194231 35.593 354 210 9 26 364 80 430 2.86e-62 207
Msa0744600 MtrunA17_Chr3g0121891 36.288 361 209 9 27 376 29 379 2.98e-61 202
Msa0744600 MtrunA17_Chr5g0418411 34.584 373 222 10 27 387 29 391 6.37e-60 199
Msa0744600 MtrunA17_Chr3g0093011 43.363 226 125 2 141 364 7 231 9.48e-60 194
Msa0744600 MtrunA17_Chr2g0332971 34.341 364 226 8 9 362 10 370 1.70e-59 198
Msa0744600 MtrunA17_Chr3g0089021 36.827 353 212 8 43 389 89 436 2.43e-59 199
Msa0744600 MtrunA17_Chr8g0337581 37.037 351 198 10 43 387 51 384 3.43e-59 197
Msa0744600 MtrunA17_Chr1g0150301 35.613 351 211 9 34 378 36 377 4.11e-58 194
Msa0744600 MtrunA17_Chr2g0293681 37.538 325 184 8 26 336 66 385 3.51e-57 192
Msa0744600 MtrunA17_Chr8g0337571 34.054 370 220 10 26 387 30 383 3.91e-57 191
Msa0744600 MtrunA17_Chr7g0257701 37.234 282 163 8 36 311 107 380 6.08e-57 191
Msa0744600 MtrunA17_Chr7g0228411 32.997 397 229 13 23 388 36 426 3.16e-56 190
Msa0744600 MtrunA17_Chr1g0150291 34.167 360 220 9 27 378 45 395 1.92e-55 187
Msa0744600 MtrunA17_Chr4g0018151 34.316 373 220 13 26 387 77 435 1.40e-54 186
Msa0744600 MtrunA17_Chr7g0257721 37.838 259 155 4 26 279 75 332 1.02e-53 181
Msa0744600 MtrunA17_Chr5g0413411 33.065 372 210 9 26 364 120 485 4.23e-53 184
Msa0744600 MtrunA17_Chr8g0365891 34.316 373 203 11 27 364 107 472 6.28e-52 181
Msa0744600 MtrunA17_Chr3g0100091 35.806 310 175 6 86 387 48 341 7.36e-50 171
Msa0744600 MtrunA17_Chr8g0336481 37.868 272 150 7 84 351 14 270 1.41e-45 158
Msa0744600 MtrunA17_Chr8g0337351 46.711 152 80 1 161 312 4 154 3.20e-41 143
Msa0744600 MtrunA17_Chr8g0337521 34.752 282 163 8 7 281 10 277 2.63e-39 142
Msa0744600 MtrunA17_Chr8g0337601 38.462 234 130 5 158 387 12 235 3.37e-39 140
Msa0744600 MtrunA17_Chr8g0337511 39.487 195 112 3 158 352 15 203 3.61e-37 135
Msa0744600 MtrunA17_Chr1g0149241 27.446 368 220 10 19 379 21 348 7.96e-32 124
Msa0744600 MtrunA17_Chr8g0337551 44.776 134 70 1 152 281 5 138 3.16e-29 110
Msa0744600 MtrunA17_Chr7g0273191 36.567 134 83 1 130 261 5 138 1.95e-24 98.2
Msa0744600 MtrunA17_Chr3g0093021 34.395 157 95 4 10 161 7 160 1.40e-22 93.6
Msa0744600 MtrunA17_Chr7g0257711 33.929 112 71 3 283 391 4 115 1.77e-13 66.6
Msa0744600 MtrunA17_Chr8g0337541 31.148 122 77 5 26 141 30 150 5.45e-12 63.5
Msa0744600 MtrunA17_Chr2g0295441 46.154 65 34 1 321 384 11 75 5.03e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0744600 AT3G07820.1 49.123 399 191 6 1 395 1 391 1.01e-134 391
Msa0744600 AT3G07840.1 48.387 403 186 6 5 395 7 399 7.62e-133 387
Msa0744600 AT5G48140.1 49.465 374 180 4 14 384 12 379 2.34e-128 375
Msa0744600 AT3G07830.1 46.632 386 198 4 1 384 1 380 1.05e-125 368
Msa0744600 AT3G14040.1 45.983 361 191 3 27 384 71 430 5.56e-111 332
Msa0744600 AT3G07850.1 48.338 331 167 3 57 384 100 429 3.55e-110 330
Msa0744600 AT4G18180.1 46.132 349 183 3 26 369 38 386 1.81e-107 323
Msa0744600 AT1G17150.1 43.590 390 210 5 11 391 14 402 1.95e-104 314
Msa0744600 AT2G33160.1 43.243 370 202 5 22 384 27 395 2.99e-100 311
Msa0744600 AT1G78400.1 42.703 370 205 4 26 389 34 402 1.06e-97 297
Msa0744600 AT4G13760.1 40.860 372 211 5 5 368 6 376 7.28e-96 292
Msa0744600 AT1G43080.1 40.625 384 216 6 6 378 7 389 7.93e-96 292
Msa0744600 AT1G43090.1 40.933 386 216 6 10 384 11 395 4.05e-95 292
Msa0744600 AT2G15460.1 40.220 363 211 4 11 368 15 376 1.85e-93 286
Msa0744600 AT1G43100.1 40.256 390 221 6 6 384 7 395 2.76e-93 287
Msa0744600 AT2G26620.1 41.341 358 206 3 14 368 18 374 5.76e-93 285
Msa0744600 AT2G15450.1 39.945 363 212 4 11 368 15 376 1.69e-92 284
Msa0744600 AT2G40310.1 39.370 381 222 5 12 384 16 395 3.48e-91 280
Msa0744600 AT2G15470.1 39.394 363 214 4 11 368 15 376 9.92e-91 279
Msa0744600 AT2G43890.1 38.421 380 224 5 11 384 9 384 3.04e-90 278
Msa0744600 AT1G05660.1 39.108 381 220 6 5 377 1 377 5.36e-90 277
Msa0744600 AT1G05650.1 38.978 372 219 6 10 377 10 377 4.40e-89 275
Msa0744600 AT1G02790.1 40.470 383 204 6 22 389 47 420 3.39e-87 271
Msa0744600 AT2G43870.1 38.743 382 225 7 7 384 1 377 3.43e-85 264
Msa0744600 AT2G43880.1 39.722 360 211 4 27 384 31 386 2.78e-81 254
Msa0744600 AT3G59850.1 38.810 353 208 6 27 375 23 371 4.28e-80 251
Msa0744600 AT3G59850.2 38.810 353 208 6 27 375 67 415 7.50e-80 252
Msa0744600 AT2G41850.1 35.677 384 231 9 16 391 57 432 3.81e-76 243
Msa0744600 AT1G65570.1 36.316 380 232 8 5 378 8 383 7.48e-74 236
Msa0744600 AT3G57510.1 34.884 387 238 9 11 390 52 431 1.09e-73 236
Msa0744600 AT1G80170.1 36.994 346 208 6 26 364 52 394 6.80e-72 232
Msa0744600 AT1G70500.1 36.872 358 215 7 25 375 65 418 6.03e-71 230
Msa0744600 AT2G43880.2 41.667 288 162 4 27 312 31 314 2.30e-70 224
Msa0744600 AT2G43860.1 36.856 369 221 9 15 377 21 383 7.20e-70 226
Msa0744600 AT1G48100.1 35.511 352 211 7 26 364 79 427 7.42e-69 225
Msa0744600 AT1G56710.1 35.750 400 218 11 1 364 1 397 8.91e-69 223
Msa0744600 AT3G07970.1 34.748 377 235 8 22 390 66 439 1.43e-68 223
Msa0744600 AT5G44840.1 35.904 376 223 9 11 378 10 375 4.33e-67 218
Msa0744600 AT1G23460.2 34.933 375 230 8 25 389 41 411 1.33e-66 218
Msa0744600 AT1G23460.1 34.933 375 230 8 25 389 65 435 2.31e-66 218
Msa0744600 AT3G15720.1 34.197 386 233 9 12 387 10 384 1.83e-64 213
Msa0744600 AT3G15720.3 34.197 386 233 9 12 387 9 383 2.33e-64 213
Msa0744600 AT4G35670.1 35.450 378 227 9 6 375 3 371 3.77e-64 210
Msa0744600 AT3G15720.2 34.456 386 229 9 12 387 9 380 7.82e-64 211
Msa0744600 AT5G27530.1 34.536 388 227 10 1 379 27 396 1.52e-63 211
Msa0744600 AT1G02460.1 34.358 358 212 11 26 364 88 441 1.51e-58 198
Msa0744600 AT5G44830.1 36.336 333 188 8 52 378 2 316 2.62e-58 193
Msa0744600 AT4G32380.1 33.594 384 227 11 10 375 5 378 4.04e-58 196
Msa0744600 AT3G26610.1 34.844 353 216 8 26 369 66 413 8.20e-58 196
Msa0744600 AT4G01890.1 33.983 359 212 12 26 364 64 417 8.26e-58 196
Msa0744600 AT5G14650.1 33.889 360 223 10 25 381 52 399 2.61e-57 194
Msa0744600 AT5G39910.1 31.926 379 176 8 25 379 34 354 5.43e-57 191
Msa0744600 AT3G15720.4 34.756 328 197 6 67 387 3 320 1.37e-55 188
Msa0744600 AT1G80170.2 37.500 264 157 5 26 282 52 314 7.04e-55 184
Msa0744600 AT1G60590.1 32.258 372 214 9 27 364 123 490 1.76e-54 189
Msa0744600 AT1G80140.1 35.987 314 183 8 60 365 4 307 4.01e-53 180
Msa0744600 AT5G17200.1 33.083 399 226 13 20 389 32 418 4.10e-52 179
Msa0744600 AT1G10640.1 32.615 371 215 8 25 364 117 483 5.12e-52 182
Msa0744600 AT4G35670.2 36.765 272 162 4 105 375 2 264 4.38e-50 171
Msa0744600 AT4G32375.1 32.847 274 173 4 105 375 13 278 5.06e-48 169
Msa0744600 AT4G32380.2 33.636 330 198 9 10 327 5 325 6.41e-48 168
Msa0744600 AT4G32370.1 33.333 324 190 10 2 310 10 322 1.14e-47 166
Msa0744600 AT5G14650.2 35.081 248 155 5 34 278 60 304 2.70e-40 145
Msa0744600 AT5G41870.1 26.042 288 168 11 26 277 44 322 5.63e-12 67.4
Msa0744600 AT3G48950.1 26.901 171 106 4 120 277 159 323 3.81e-11 65.1

Find 79 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGTTGCTCTTACATTTAA+TGG 0.122345 5_1:-65420017 Msa0744600:CDS
GCTTATCAATGGATTAAATT+TGG 0.144207 5_1:-65421313 Msa0744600:CDS
AAACTTTCATGTCAATGTTT+TGG 0.199633 5_1:-65420690 Msa0744600:CDS
TGTTCAACAGCTTCTTCTTT+TGG 0.257521 5_1:+65420440 None:intergenic
TTAACACATTTAGCGTTTAC+TGG 0.264248 5_1:+65419990 None:intergenic
TCTGCTGCAGTTGTGCATTT+AGG 0.268564 5_1:+65419939 None:intergenic
ATCTTTGATATAAAATCATT+TGG 0.321131 5_1:-65421819 Msa0744600:CDS
CTCGAACAATTGAATGCTTT+AGG 0.322592 5_1:+65420735 None:intergenic
CAGGTCCACAATTCACATTT+TGG 0.326679 5_1:+65420498 None:intergenic
TCAGTGTTTATGCTTGTAAC+TGG 0.338580 5_1:+65420626 None:intergenic
TCCTTATTGTTTGCAACGCT+TGG 0.346075 5_1:-65421858 Msa0744600:CDS
GGTCAATGATCACTGGGTTT+AGG 0.350968 5_1:+65420291 None:intergenic
TCCAAGCGTTGCAAACAATA+AGG 0.351732 5_1:+65421857 None:intergenic
CCTATTGAAGTTCAAGTTGA+TGG 0.376197 5_1:-65421376 Msa0744600:CDS
GGAATTAGTGTTGGAAGCTT+AGG 0.384131 5_1:-65420470 Msa0744600:CDS
TAAGCATCATTAAGTTCATC+AGG 0.384599 5_1:+65421331 None:intergenic
CAAGACCTGGCCTAGTTCTC+CGG 0.386266 5_1:-65420366 Msa0744600:CDS
TCAGTAATCGGAGACGTTCC+CGG 0.393664 5_1:+65420347 None:intergenic
AATGTCAAGCCTATTCTTAC+CGG 0.399141 5_1:-65419969 Msa0744600:CDS
TTGGAATCAATGCTCAAAAC+TGG 0.406184 5_1:-65420255 Msa0744600:intron
ATGCATGCTGTAGATGTAAA+AGG 0.415509 5_1:-65421412 Msa0744600:CDS
CCATCAACTTGAACTTCAAT+AGG 0.415583 5_1:+65421376 None:intergenic
TCAAAATGCATATCAGTAAT+CGG 0.423258 5_1:+65420335 None:intergenic
AAGTTATCTTCAAGAACATC+AGG 0.426204 5_1:-65420115 Msa0744600:CDS
TTTCAATGTGAACAGAACTT+TGG 0.426227 5_1:-65420767 Msa0744600:intron
TGGAGATGATTGTGTCTCAT+TGG 0.430112 5_1:-65420546 Msa0744600:CDS
ATTAGGCCTTTACAAATGCT+TGG 0.431043 5_1:-65421495 Msa0744600:intron
TACTCTTGGTCAATGATCAC+TGG 0.438721 5_1:+65420284 None:intergenic
TGCATCTTGTATACCCCTCT+TGG 0.440904 5_1:+65421430 None:intergenic
AACTTAATGATGCTTATCAA+TGG 0.446303 5_1:-65421324 Msa0744600:CDS
GGAGTCGGTCCGGTAAGAAT+AGG 0.456679 5_1:+65419960 None:intergenic
GCTTGTAACTGGAGCAGTTA+TGG 0.462422 5_1:+65420637 None:intergenic
GGAGACGTTCCCGGAGAACT+AGG 0.494257 5_1:+65420356 None:intergenic
CTCAACACAAACATTGCTAC+TGG 0.495907 5_1:-65420566 Msa0744600:CDS
GATTCCAAGGACAATACTCT+TGG 0.504808 5_1:+65420270 None:intergenic
TATAAGAACCACTCCATCCT+TGG 0.505187 5_1:+65420079 None:intergenic
TGCTTTCCAAGCATTTGTAA+AGG 0.512646 5_1:+65421489 None:intergenic
TTGACCAAGAGTATTGTCCT+TGG 0.513299 5_1:-65420274 Msa0744600:CDS
ATGGTAATGGTGAAACTGCT+TGG 0.513617 5_1:-65421249 Msa0744600:CDS
TTTGATATAAAATCATTTGG+AGG 0.515308 5_1:-65421816 Msa0744600:CDS
AGATGTAAAAGGTCCTTGTA+AGG 0.526895 5_1:-65421401 Msa0744600:CDS
GGCACTTCAAAGACCAAGGA+TGG 0.536177 5_1:-65420092 Msa0744600:CDS
ACTTCAATAGGAGCCTTACA+AGG 0.540286 5_1:+65421388 None:intergenic
AAGACCTGGCCTAGTTCTCC+GGG 0.541102 5_1:-65420365 Msa0744600:CDS
GCAGTTGTGCATTTAGGAGT+CGG 0.541127 5_1:+65419945 None:intergenic
AACTAATAATCAACATGGAT+AGG 0.549661 5_1:-65421908 None:intergenic
GACACTATCAAATGTGAAGT+TGG 0.550914 5_1:+65420661 None:intergenic
GTGAATTGTGGACCTGGCCA+TGG 0.551852 5_1:-65420491 Msa0744600:CDS
GGAGATGATTGTGTCTCATT+GGG 0.552814 5_1:-65420545 Msa0744600:CDS
TGTGCATTTAGGAGTCGGTC+CGG 0.554007 5_1:+65419950 None:intergenic
CATTGTTATATCTGCATGAG+AGG 0.557573 5_1:+65421791 None:intergenic
GTTACAAGCATAAACACTGA+TGG 0.562557 5_1:-65420623 Msa0744600:CDS
AGCTTCCAACACTAATTCCA+TGG 0.570135 5_1:+65420474 None:intergenic
ACTCTTGGTCAATGATCACT+GGG 0.572903 5_1:+65420285 None:intergenic
AACACTGATGGAATACACAT+TGG 0.573807 5_1:-65420611 Msa0744600:CDS
CGTTCCCGGAGAACTAGGCC+AGG 0.584285 5_1:+65420361 None:intergenic
GCTTGGAGACAAAATGATTG+TGG 0.586530 5_1:-65421232 Msa0744600:CDS
CCTGGCCATGGAATTAGTGT+TGG 0.589051 5_1:-65420479 Msa0744600:CDS
AGCAAAGTTATGATTCCAAG+AGG 0.591832 5_1:-65421445 Msa0744600:CDS
CAAAATGTGAATTGTGGACC+TGG 0.593835 5_1:-65420497 Msa0744600:CDS
CCAACACTAATTCCATGGCC+AGG 0.596782 5_1:+65420479 None:intergenic
TTTAGCTCAACAGCATCACA+TGG 0.598331 5_1:+65420041 None:intergenic
GATTGTGTCTCATTGGGAGA+TGG 0.609787 5_1:-65420539 Msa0744600:CDS
AAGCATCATTAAGTTCATCA+GGG 0.611991 5_1:+65421332 None:intergenic
TTCAAAGACCAAGGATGGAG+TGG 0.613535 5_1:-65420087 Msa0744600:CDS
CACATGCAAGAGACGTTCCA+TGG 0.616857 5_1:-65421200 Msa0744600:intron
CAAAGTTATGATTCCAAGAG+GGG 0.618993 5_1:-65421443 Msa0744600:CDS
GCAAAGTTATGATTCCAAGA+GGG 0.620573 5_1:-65421444 Msa0744600:CDS
ACCATCACAAATACTGACAA+TGG 0.631144 5_1:-65420398 Msa0744600:CDS
CATGGAACGTCTCTTGCATG+TGG 0.636591 5_1:+65421201 None:intergenic
AGTTATCTTCAAGAACATCA+GGG 0.642521 5_1:-65420114 Msa0744600:CDS
ACCATTGTCAGTATTTGTGA+TGG 0.650695 5_1:+65420397 None:intergenic
CTCTCATGCAGATATAACAA+TGG 0.652149 5_1:-65421790 Msa0744600:intron
AATGCTTGGAAAGCAGCATG+TGG 0.653455 5_1:-65421481 Msa0744600:CDS
ATGGTGTGAGGATCAAGACC+TGG 0.668470 5_1:-65420379 Msa0744600:CDS
CAGGGGCACTTCAAAGACCA+AGG 0.672890 5_1:-65420096 Msa0744600:CDS
GTTATCTTCAAGAACATCAG+GGG 0.677796 5_1:-65420113 Msa0744600:CDS
CAAATACTGACAATGGTGTG+AGG 0.682831 5_1:-65420391 Msa0744600:CDS
ACTGTCCAAAATGTGAATTG+TGG 0.683587 5_1:-65420503 Msa0744600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAATAAAAATTATCAATT+TGG + chr5_1:65420931-65420950 None:intergenic 10.0%
!!! TATTATATATTATTTTTTCC+AGG - chr5_1:65421664-65421683 Msa0744600:intron 10.0%
!! AAGAATAAAAATTATCAATT+TGG + chr5_1:65420931-65420950 None:intergenic 10.0%
!!! TATTATATATTATTTTTTCC+AGG - chr5_1:65421664-65421683 Msa0744600:intron 10.0%
!!! GATTTTATATCAAAGATATT+AGG + chr5_1:65420004-65420023 None:intergenic 15.0%
!! ATCTTTGATATAAAATCATT+TGG - chr5_1:65420007-65420026 Msa0744600:CDS 15.0%
!! AAAAATTAGTGATTTCTATA+AGG - chr5_1:65420076-65420095 Msa0744600:CDS 15.0%
!! AAAATTAGTGATTTCTATAA+GGG - chr5_1:65420077-65420096 Msa0744600:CDS 15.0%
!! AAATTTGAACTTAGATAAAA+TGG + chr5_1:65420158-65420177 None:intergenic 15.0%
!!! TAAATTATTTTCATTTACCA+TGG + chr5_1:65420646-65420665 None:intergenic 15.0%
!!! TATTTTCTCAATAACTAATT+TGG - chr5_1:65420973-65420992 Msa0744600:intron 15.0%
!!! GATTTTATATCAAAGATATT+AGG + chr5_1:65420004-65420023 None:intergenic 15.0%
!! ATCTTTGATATAAAATCATT+TGG - chr5_1:65420007-65420026 Msa0744600:CDS 15.0%
!! AAAAATTAGTGATTTCTATA+AGG - chr5_1:65420076-65420095 Msa0744600:CDS 15.0%
!! AAAATTAGTGATTTCTATAA+GGG - chr5_1:65420077-65420096 Msa0744600:CDS 15.0%
!! AAATTTGAACTTAGATAAAA+TGG + chr5_1:65420158-65420177 None:intergenic 15.0%
!!! TAAATTATTTTCATTTACCA+TGG + chr5_1:65420646-65420665 None:intergenic 15.0%
!!! TATTTTCTCAATAACTAATT+TGG - chr5_1:65420973-65420992 Msa0744600:intron 15.0%
!! TTTGATATAAAATCATTTGG+AGG - chr5_1:65420010-65420029 Msa0744600:CDS 20.0%
!!! GTTCAAATTTTTTTTGTCTT+AGG - chr5_1:65420168-65420187 Msa0744600:intron 20.0%
!!! AATTTTAAGAGTGACATATT+TGG + chr5_1:65420242-65420261 None:intergenic 20.0%
!! ATGTTATCAATATCATTGTA+TGG - chr5_1:65420269-65420288 Msa0744600:CDS 20.0%
!!! TATTTTACTTTATCAGGTAA+AGG - chr5_1:65420546-65420565 Msa0744600:CDS 20.0%
!! AGTAAATTTGATGTTGTATT+TGG - chr5_1:65420774-65420793 Msa0744600:intron 20.0%
!! GAAAATACACAAAAACTATT+TGG + chr5_1:65420960-65420979 None:intergenic 20.0%
!!! TTGCTAATCTTTATTTTTGA+TGG + chr5_1:65421692-65421711 None:intergenic 20.0%
!! TTTGATATAAAATCATTTGG+AGG - chr5_1:65420010-65420029 Msa0744600:CDS 20.0%
!!! GTTCAAATTTTTTTTGTCTT+AGG - chr5_1:65420168-65420187 Msa0744600:intron 20.0%
!!! AATTTTAAGAGTGACATATT+TGG + chr5_1:65420242-65420261 None:intergenic 20.0%
!! ATGTTATCAATATCATTGTA+TGG - chr5_1:65420269-65420288 Msa0744600:CDS 20.0%
!!! TATTTTACTTTATCAGGTAA+AGG - chr5_1:65420546-65420565 Msa0744600:CDS 20.0%
!! AGTAAATTTGATGTTGTATT+TGG - chr5_1:65420774-65420793 Msa0744600:intron 20.0%
!! GAAAATACACAAAAACTATT+TGG + chr5_1:65420960-65420979 None:intergenic 20.0%
!!! TTGCTAATCTTTATTTTTGA+TGG + chr5_1:65421692-65421711 None:intergenic 20.0%
! TGAACTTAGATAAAATGGTA+TGG + chr5_1:65420153-65420172 None:intergenic 25.0%
! AACTTAATGATGCTTATCAA+TGG - chr5_1:65420502-65420521 Msa0744600:CDS 25.0%
!!! GCTTATCAATGGATTAAATT+TGG - chr5_1:65420513-65420532 Msa0744600:CDS 25.0%
!! GTTGACTATTTTACTTTATC+AGG - chr5_1:65420540-65420559 Msa0744600:CDS 25.0%
!! ATTTTCATTTCAATGCTACT+CGG - chr5_1:65420669-65420688 Msa0744600:CDS 25.0%
! ATATGTAACATTGAAAATCG+AGG + chr5_1:65420750-65420769 None:intergenic 25.0%
! TCTCTTAAAATCTCAAATAC+CGG - chr5_1:65420820-65420839 Msa0744600:intron 25.0%
! CTATAAAAAACTATCTTGAC+CGG + chr5_1:65420842-65420861 None:intergenic 25.0%
!! AAACTTTCATGTCAATGTTT+TGG - chr5_1:65421136-65421155 Msa0744600:intron 25.0%
!! AACTTTCATGTCAATGTTTT+GGG - chr5_1:65421137-65421156 Msa0744600:intron 25.0%
! TCAAAATGCATATCAGTAAT+CGG + chr5_1:65421494-65421513 None:intergenic 25.0%
!!! GCATTTTGAAGATATTATCA+TGG - chr5_1:65421505-65421524 Msa0744600:intron 25.0%
! AATGTTGCTCTTACATTTAA+TGG - chr5_1:65421809-65421828 Msa0744600:CDS 25.0%
! TGAACTTAGATAAAATGGTA+TGG + chr5_1:65420153-65420172 None:intergenic 25.0%
! AACTTAATGATGCTTATCAA+TGG - chr5_1:65420502-65420521 Msa0744600:CDS 25.0%
!!! GCTTATCAATGGATTAAATT+TGG - chr5_1:65420513-65420532 Msa0744600:CDS 25.0%
!! GTTGACTATTTTACTTTATC+AGG - chr5_1:65420540-65420559 Msa0744600:CDS 25.0%
!! ATTTTCATTTCAATGCTACT+CGG - chr5_1:65420669-65420688 Msa0744600:CDS 25.0%
! ATATGTAACATTGAAAATCG+AGG + chr5_1:65420750-65420769 None:intergenic 25.0%
! TCTCTTAAAATCTCAAATAC+CGG - chr5_1:65420820-65420839 Msa0744600:intron 25.0%
! CTATAAAAAACTATCTTGAC+CGG + chr5_1:65420842-65420861 None:intergenic 25.0%
!! AAACTTTCATGTCAATGTTT+TGG - chr5_1:65421136-65421155 Msa0744600:intron 25.0%
!! AACTTTCATGTCAATGTTTT+GGG - chr5_1:65421137-65421156 Msa0744600:intron 25.0%
! TCAAAATGCATATCAGTAAT+CGG + chr5_1:65421494-65421513 None:intergenic 25.0%
!!! GCATTTTGAAGATATTATCA+TGG - chr5_1:65421505-65421524 Msa0744600:intron 25.0%
! AATGTTGCTCTTACATTTAA+TGG - chr5_1:65421809-65421828 Msa0744600:CDS 25.0%
ATTAGTGATTTCTATAAGGG+TGG - chr5_1:65420080-65420099 Msa0744600:CDS 30.0%
!!! TTTTTTTGTCTTAGGTCGAA+TGG - chr5_1:65420176-65420195 Msa0744600:intron 30.0%
GCTAATATGTTGTGTCAATT+AGG - chr5_1:65420314-65420333 Msa0744600:CDS 30.0%
AAGCATCATTAAGTTCATCA+GGG + chr5_1:65420497-65420516 None:intergenic 30.0%
TAAGCATCATTAAGTTCATC+AGG + chr5_1:65420498-65420517 None:intergenic 30.0%
!!! AAAGGTGTTTTTGATGGTAA+TGG - chr5_1:65420564-65420583 Msa0744600:CDS 30.0%
TTTCAATGTGAACAGAACTT+TGG - chr5_1:65421059-65421078 Msa0744600:intron 30.0%
TTGAAACATTCAACATAGTG+AGG - chr5_1:65421641-65421660 Msa0744600:intron 30.0%
!!! TCTTTATTTTTGATGGAACC+TGG + chr5_1:65421685-65421704 None:intergenic 30.0%
AAGTTATCTTCAAGAACATC+AGG - chr5_1:65421711-65421730 Msa0744600:intron 30.0%
AGTTATCTTCAAGAACATCA+GGG - chr5_1:65421712-65421731 Msa0744600:intron 30.0%
TTAACACATTTAGCGTTTAC+TGG + chr5_1:65421839-65421858 None:intergenic 30.0%
ATTAGTGATTTCTATAAGGG+TGG - chr5_1:65420080-65420099 Msa0744600:CDS 30.0%
!!! TTTTTTTGTCTTAGGTCGAA+TGG - chr5_1:65420176-65420195 Msa0744600:intron 30.0%
GCTAATATGTTGTGTCAATT+AGG - chr5_1:65420314-65420333 Msa0744600:CDS 30.0%
AAGCATCATTAAGTTCATCA+GGG + chr5_1:65420497-65420516 None:intergenic 30.0%
TAAGCATCATTAAGTTCATC+AGG + chr5_1:65420498-65420517 None:intergenic 30.0%
!!! AAAGGTGTTTTTGATGGTAA+TGG - chr5_1:65420564-65420583 Msa0744600:CDS 30.0%
TTTCAATGTGAACAGAACTT+TGG - chr5_1:65421059-65421078 Msa0744600:intron 30.0%
TTGAAACATTCAACATAGTG+AGG - chr5_1:65421641-65421660 Msa0744600:intron 30.0%
!!! TCTTTATTTTTGATGGAACC+TGG + chr5_1:65421685-65421704 None:intergenic 30.0%
AAGTTATCTTCAAGAACATC+AGG - chr5_1:65421711-65421730 Msa0744600:intron 30.0%
AGTTATCTTCAAGAACATCA+GGG - chr5_1:65421712-65421731 Msa0744600:intron 30.0%
TTAACACATTTAGCGTTTAC+TGG + chr5_1:65421839-65421858 None:intergenic 30.0%
CATTGTTATATCTGCATGAG+AGG + chr5_1:65420038-65420057 None:intergenic 35.0%
CTCTCATGCAGATATAACAA+TGG - chr5_1:65420036-65420055 Msa0744600:CDS 35.0%
CAATTTATGCAGTACTGTAG+AGG - chr5_1:65420214-65420233 Msa0744600:intron 35.0%
ATTAGGCCTTTACAAATGCT+TGG - chr5_1:65420331-65420350 Msa0744600:CDS 35.0%
TGCTTTCCAAGCATTTGTAA+AGG + chr5_1:65420340-65420359 None:intergenic 35.0%
AGCAAAGTTATGATTCCAAG+AGG - chr5_1:65420381-65420400 Msa0744600:CDS 35.0%
GCAAAGTTATGATTCCAAGA+GGG - chr5_1:65420382-65420401 Msa0744600:CDS 35.0%
CAAAGTTATGATTCCAAGAG+GGG - chr5_1:65420383-65420402 Msa0744600:CDS 35.0%
ATGCATGCTGTAGATGTAAA+AGG - chr5_1:65420414-65420433 Msa0744600:CDS 35.0%
AGATGTAAAAGGTCCTTGTA+AGG - chr5_1:65420425-65420444 Msa0744600:CDS 35.0%
CCATCAACTTGAACTTCAAT+AGG + chr5_1:65420453-65420472 None:intergenic 35.0%
!! CCTATTGAAGTTCAAGTTGA+TGG - chr5_1:65420450-65420469 Msa0744600:CDS 35.0%
! TTAAGTTCATCAGGGTTTTG+TGG + chr5_1:65420489-65420508 None:intergenic 35.0%
!!! TCAGGTAAAGGTGTTTTTGA+TGG - chr5_1:65420558-65420577 Msa0744600:CDS 35.0%
CTCGAACAATTGAATGCTTT+AGG + chr5_1:65421094-65421113 None:intergenic 35.0%
GACACTATCAAATGTGAAGT+TGG + chr5_1:65421168-65421187 None:intergenic 35.0%
TCAGTGTTTATGCTTGTAAC+TGG + chr5_1:65421203-65421222 None:intergenic 35.0%
GTTACAAGCATAAACACTGA+TGG - chr5_1:65421203-65421222 Msa0744600:CDS 35.0%
AACACTGATGGAATACACAT+TGG - chr5_1:65421215-65421234 Msa0744600:CDS 35.0%
ACTGTCCAAAATGTGAATTG+TGG - chr5_1:65421323-65421342 Msa0744600:CDS 35.0%
! TGTTCAACAGCTTCTTCTTT+TGG + chr5_1:65421389-65421408 None:intergenic 35.0%
ACCATCACAAATACTGACAA+TGG - chr5_1:65421428-65421447 Msa0744600:CDS 35.0%
ACCATTGTCAGTATTTGTGA+TGG + chr5_1:65421432-65421451 None:intergenic 35.0%
!!! AGTTTTGAGCATTGATTCCA+AGG + chr5_1:65421572-65421591 None:intergenic 35.0%
TTGGAATCAATGCTCAAAAC+TGG - chr5_1:65421571-65421590 Msa0744600:intron 35.0%
GTTATCTTCAAGAACATCAG+GGG - chr5_1:65421713-65421732 Msa0744600:intron 35.0%
AATGTCAAGCCTATTCTTAC+CGG - chr5_1:65421857-65421876 Msa0744600:CDS 35.0%
CATTGTTATATCTGCATGAG+AGG + chr5_1:65420038-65420057 None:intergenic 35.0%
CTCTCATGCAGATATAACAA+TGG - chr5_1:65420036-65420055 Msa0744600:CDS 35.0%
CAATTTATGCAGTACTGTAG+AGG - chr5_1:65420214-65420233 Msa0744600:intron 35.0%
ATTAGGCCTTTACAAATGCT+TGG - chr5_1:65420331-65420350 Msa0744600:CDS 35.0%
TGCTTTCCAAGCATTTGTAA+AGG + chr5_1:65420340-65420359 None:intergenic 35.0%
AGCAAAGTTATGATTCCAAG+AGG - chr5_1:65420381-65420400 Msa0744600:CDS 35.0%
GCAAAGTTATGATTCCAAGA+GGG - chr5_1:65420382-65420401 Msa0744600:CDS 35.0%
CAAAGTTATGATTCCAAGAG+GGG - chr5_1:65420383-65420402 Msa0744600:CDS 35.0%
ATGCATGCTGTAGATGTAAA+AGG - chr5_1:65420414-65420433 Msa0744600:CDS 35.0%
AGATGTAAAAGGTCCTTGTA+AGG - chr5_1:65420425-65420444 Msa0744600:CDS 35.0%
CCATCAACTTGAACTTCAAT+AGG + chr5_1:65420453-65420472 None:intergenic 35.0%
!! CCTATTGAAGTTCAAGTTGA+TGG - chr5_1:65420450-65420469 Msa0744600:CDS 35.0%
! TTAAGTTCATCAGGGTTTTG+TGG + chr5_1:65420489-65420508 None:intergenic 35.0%
!!! TCAGGTAAAGGTGTTTTTGA+TGG - chr5_1:65420558-65420577 Msa0744600:CDS 35.0%
CTCGAACAATTGAATGCTTT+AGG + chr5_1:65421094-65421113 None:intergenic 35.0%
GACACTATCAAATGTGAAGT+TGG + chr5_1:65421168-65421187 None:intergenic 35.0%
TCAGTGTTTATGCTTGTAAC+TGG + chr5_1:65421203-65421222 None:intergenic 35.0%
GTTACAAGCATAAACACTGA+TGG - chr5_1:65421203-65421222 Msa0744600:CDS 35.0%
AACACTGATGGAATACACAT+TGG - chr5_1:65421215-65421234 Msa0744600:CDS 35.0%
ACTGTCCAAAATGTGAATTG+TGG - chr5_1:65421323-65421342 Msa0744600:CDS 35.0%
! TGTTCAACAGCTTCTTCTTT+TGG + chr5_1:65421389-65421408 None:intergenic 35.0%
ACCATCACAAATACTGACAA+TGG - chr5_1:65421428-65421447 Msa0744600:CDS 35.0%
ACCATTGTCAGTATTTGTGA+TGG + chr5_1:65421432-65421451 None:intergenic 35.0%
!!! AGTTTTGAGCATTGATTCCA+AGG + chr5_1:65421572-65421591 None:intergenic 35.0%
TTGGAATCAATGCTCAAAAC+TGG - chr5_1:65421571-65421590 Msa0744600:intron 35.0%
GTTATCTTCAAGAACATCAG+GGG - chr5_1:65421713-65421732 Msa0744600:intron 35.0%
AATGTCAAGCCTATTCTTAC+CGG - chr5_1:65421857-65421876 Msa0744600:CDS 35.0%
TCCTTATTGTTTGCAACGCT+TGG - chr5_1:65419968-65419987 Msa0744600:CDS 40.0%
! TCCAAGCGTTGCAAACAATA+AGG + chr5_1:65419972-65419991 None:intergenic 40.0%
ATAAGGGTGGCTCTTATGTT+AGG - chr5_1:65420093-65420112 Msa0744600:CDS 40.0%
ACATCAAGTGCAGTGTTGTA+GGG + chr5_1:65420122-65420141 None:intergenic 40.0%
ACTTCAATAGGAGCCTTACA+AGG + chr5_1:65420441-65420460 None:intergenic 40.0%
!! ATGGTAATGGTGAAACTGCT+TGG - chr5_1:65420577-65420596 Msa0744600:CDS 40.0%
GCTTGGAGACAAAATGATTG+TGG - chr5_1:65420594-65420613 Msa0744600:CDS 40.0%
CTCAACACAAACATTGCTAC+TGG - chr5_1:65421260-65421279 Msa0744600:CDS 40.0%
TGGAGATGATTGTGTCTCAT+TGG - chr5_1:65421280-65421299 Msa0744600:CDS 40.0%
GGAGATGATTGTGTCTCATT+GGG - chr5_1:65421281-65421300 Msa0744600:CDS 40.0%
! CAGGTCCACAATTCACATTT+TGG + chr5_1:65421331-65421350 None:intergenic 40.0%
CAAAATGTGAATTGTGGACC+TGG - chr5_1:65421329-65421348 Msa0744600:CDS 40.0%
AGCTTCCAACACTAATTCCA+TGG + chr5_1:65421355-65421374 None:intergenic 40.0%
! GGAATTAGTGTTGGAAGCTT+AGG - chr5_1:65421356-65421375 Msa0744600:CDS 40.0%
CAAATACTGACAATGGTGTG+AGG - chr5_1:65421435-65421454 Msa0744600:CDS 40.0%
ACTCTTGGTCAATGATCACT+GGG + chr5_1:65421544-65421563 None:intergenic 40.0%
TACTCTTGGTCAATGATCAC+TGG + chr5_1:65421545-65421564 None:intergenic 40.0%
!! TTGACCAAGAGTATTGTCCT+TGG - chr5_1:65421552-65421571 Msa0744600:intron 40.0%
GATTCCAAGGACAATACTCT+TGG + chr5_1:65421559-65421578 None:intergenic 40.0%
TATAAGAACCACTCCATCCT+TGG + chr5_1:65421750-65421769 None:intergenic 40.0%
! TTTAGCTCAACAGCATCACA+TGG + chr5_1:65421788-65421807 None:intergenic 40.0%
TCCTTATTGTTTGCAACGCT+TGG - chr5_1:65419968-65419987 Msa0744600:CDS 40.0%
! TCCAAGCGTTGCAAACAATA+AGG + chr5_1:65419972-65419991 None:intergenic 40.0%
ATAAGGGTGGCTCTTATGTT+AGG - chr5_1:65420093-65420112 Msa0744600:CDS 40.0%
ACATCAAGTGCAGTGTTGTA+GGG + chr5_1:65420122-65420141 None:intergenic 40.0%
ACTTCAATAGGAGCCTTACA+AGG + chr5_1:65420441-65420460 None:intergenic 40.0%
!! ATGGTAATGGTGAAACTGCT+TGG - chr5_1:65420577-65420596 Msa0744600:CDS 40.0%
GCTTGGAGACAAAATGATTG+TGG - chr5_1:65420594-65420613 Msa0744600:CDS 40.0%
CTCAACACAAACATTGCTAC+TGG - chr5_1:65421260-65421279 Msa0744600:CDS 40.0%
TGGAGATGATTGTGTCTCAT+TGG - chr5_1:65421280-65421299 Msa0744600:CDS 40.0%
GGAGATGATTGTGTCTCATT+GGG - chr5_1:65421281-65421300 Msa0744600:CDS 40.0%
! CAGGTCCACAATTCACATTT+TGG + chr5_1:65421331-65421350 None:intergenic 40.0%
CAAAATGTGAATTGTGGACC+TGG - chr5_1:65421329-65421348 Msa0744600:CDS 40.0%
AGCTTCCAACACTAATTCCA+TGG + chr5_1:65421355-65421374 None:intergenic 40.0%
! GGAATTAGTGTTGGAAGCTT+AGG - chr5_1:65421356-65421375 Msa0744600:CDS 40.0%
CAAATACTGACAATGGTGTG+AGG - chr5_1:65421435-65421454 Msa0744600:CDS 40.0%
ACTCTTGGTCAATGATCACT+GGG + chr5_1:65421544-65421563 None:intergenic 40.0%
TACTCTTGGTCAATGATCAC+TGG + chr5_1:65421545-65421564 None:intergenic 40.0%
!! TTGACCAAGAGTATTGTCCT+TGG - chr5_1:65421552-65421571 Msa0744600:intron 40.0%
GATTCCAAGGACAATACTCT+TGG + chr5_1:65421559-65421578 None:intergenic 40.0%
TATAAGAACCACTCCATCCT+TGG + chr5_1:65421750-65421769 None:intergenic 40.0%
! TTTAGCTCAACAGCATCACA+TGG + chr5_1:65421788-65421807 None:intergenic 40.0%
CATCAAGTGCAGTGTTGTAG+GGG + chr5_1:65420121-65420140 None:intergenic 45.0%
CACATCAAGTGCAGTGTTGT+AGG + chr5_1:65420123-65420142 None:intergenic 45.0%
CAACACTGCACTTGATGTGA+CGG - chr5_1:65420124-65420143 Msa0744600:CDS 45.0%
CTGCATAAATTGCATGCAGC+AGG + chr5_1:65420206-65420225 None:intergenic 45.0%
AATGCTTGGAAAGCAGCATG+TGG - chr5_1:65420345-65420364 Msa0744600:CDS 45.0%
TGCATCTTGTATACCCCTCT+TGG + chr5_1:65420399-65420418 None:intergenic 45.0%
TGTGTACCAATCACTTGCGT+TGG - chr5_1:65420723-65420742 Msa0744600:CDS 45.0%
GCTTGTAACTGGAGCAGTTA+TGG + chr5_1:65421192-65421211 None:intergenic 45.0%
GATTGTGTCTCATTGGGAGA+TGG - chr5_1:65421287-65421306 Msa0744600:CDS 45.0%
GGTCAATGATCACTGGGTTT+AGG + chr5_1:65421538-65421557 None:intergenic 45.0%
TTCAAAGACCAAGGATGGAG+TGG - chr5_1:65421739-65421758 Msa0744600:intron 45.0%
GCAGTTGTGCATTTAGGAGT+CGG + chr5_1:65421884-65421903 None:intergenic 45.0%
TCTGCTGCAGTTGTGCATTT+AGG + chr5_1:65421890-65421909 None:intergenic 45.0%
CATCAAGTGCAGTGTTGTAG+GGG + chr5_1:65420121-65420140 None:intergenic 45.0%
CACATCAAGTGCAGTGTTGT+AGG + chr5_1:65420123-65420142 None:intergenic 45.0%
CAACACTGCACTTGATGTGA+CGG - chr5_1:65420124-65420143 Msa0744600:CDS 45.0%
CTGCATAAATTGCATGCAGC+AGG + chr5_1:65420206-65420225 None:intergenic 45.0%
AATGCTTGGAAAGCAGCATG+TGG - chr5_1:65420345-65420364 Msa0744600:CDS 45.0%
TGCATCTTGTATACCCCTCT+TGG + chr5_1:65420399-65420418 None:intergenic 45.0%
TGTGTACCAATCACTTGCGT+TGG - chr5_1:65420723-65420742 Msa0744600:CDS 45.0%
GCTTGTAACTGGAGCAGTTA+TGG + chr5_1:65421192-65421211 None:intergenic 45.0%
GATTGTGTCTCATTGGGAGA+TGG - chr5_1:65421287-65421306 Msa0744600:CDS 45.0%
GGTCAATGATCACTGGGTTT+AGG + chr5_1:65421538-65421557 None:intergenic 45.0%
TTCAAAGACCAAGGATGGAG+TGG - chr5_1:65421739-65421758 Msa0744600:intron 45.0%
GCAGTTGTGCATTTAGGAGT+CGG + chr5_1:65421884-65421903 None:intergenic 45.0%
TCTGCTGCAGTTGTGCATTT+AGG + chr5_1:65421890-65421909 None:intergenic 45.0%
CATGGAACGTCTCTTGCATG+TGG + chr5_1:65420628-65420647 None:intergenic 50.0%
CACATGCAAGAGACGTTCCA+TGG - chr5_1:65420626-65420645 Msa0744600:CDS 50.0%
CCAACACTAATTCCATGGCC+AGG + chr5_1:65421350-65421369 None:intergenic 50.0%
CCTGGCCATGGAATTAGTGT+TGG - chr5_1:65421347-65421366 Msa0744600:CDS 50.0%
ATGGTGTGAGGATCAAGACC+TGG - chr5_1:65421447-65421466 Msa0744600:CDS 50.0%
TCAGTAATCGGAGACGTTCC+CGG + chr5_1:65421482-65421501 None:intergenic 50.0%
GGCACTTCAAAGACCAAGGA+TGG - chr5_1:65421734-65421753 Msa0744600:intron 50.0%
TGTGCATTTAGGAGTCGGTC+CGG + chr5_1:65421879-65421898 None:intergenic 50.0%
CATGGAACGTCTCTTGCATG+TGG + chr5_1:65420628-65420647 None:intergenic 50.0%
CACATGCAAGAGACGTTCCA+TGG - chr5_1:65420626-65420645 Msa0744600:CDS 50.0%
CCAACACTAATTCCATGGCC+AGG + chr5_1:65421350-65421369 None:intergenic 50.0%
CCTGGCCATGGAATTAGTGT+TGG - chr5_1:65421347-65421366 Msa0744600:CDS 50.0%
ATGGTGTGAGGATCAAGACC+TGG - chr5_1:65421447-65421466 Msa0744600:CDS 50.0%
TCAGTAATCGGAGACGTTCC+CGG + chr5_1:65421482-65421501 None:intergenic 50.0%
GGCACTTCAAAGACCAAGGA+TGG - chr5_1:65421734-65421753 Msa0744600:intron 50.0%
TGTGCATTTAGGAGTCGGTC+CGG + chr5_1:65421879-65421898 None:intergenic 50.0%
CGAGGTCCAACGCAAGTGAT+TGG + chr5_1:65420732-65420751 None:intergenic 55.0%
GTGAATTGTGGACCTGGCCA+TGG - chr5_1:65421335-65421354 Msa0744600:CDS 55.0%
! CAAGACCTGGCCTAGTTCTC+CGG - chr5_1:65421460-65421479 Msa0744600:CDS 55.0%
! AAGACCTGGCCTAGTTCTCC+GGG - chr5_1:65421461-65421480 Msa0744600:CDS 55.0%
!! CAGGGGCACTTCAAAGACCA+AGG - chr5_1:65421730-65421749 Msa0744600:intron 55.0%
GGAGTCGGTCCGGTAAGAAT+AGG + chr5_1:65421869-65421888 None:intergenic 55.0%
CGAGGTCCAACGCAAGTGAT+TGG + chr5_1:65420732-65420751 None:intergenic 55.0%
GTGAATTGTGGACCTGGCCA+TGG - chr5_1:65421335-65421354 Msa0744600:CDS 55.0%
! CAAGACCTGGCCTAGTTCTC+CGG - chr5_1:65421460-65421479 Msa0744600:CDS 55.0%
! AAGACCTGGCCTAGTTCTCC+GGG - chr5_1:65421461-65421480 Msa0744600:CDS 55.0%
!! CAGGGGCACTTCAAAGACCA+AGG - chr5_1:65421730-65421749 Msa0744600:intron 55.0%
GGAGTCGGTCCGGTAAGAAT+AGG + chr5_1:65421869-65421888 None:intergenic 55.0%
GGAGACGTTCCCGGAGAACT+AGG + chr5_1:65421473-65421492 None:intergenic 60.0%
GGAGACGTTCCCGGAGAACT+AGG + chr5_1:65421473-65421492 None:intergenic 60.0%
CGTTCCCGGAGAACTAGGCC+AGG + chr5_1:65421468-65421487 None:intergenic 65.0%
CGTTCCCGGAGAACTAGGCC+AGG + chr5_1:65421468-65421487 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 65419932 65421916 65419932 ID=Msa0744600;Name=Msa0744600
chr5_1 mRNA 65419932 65421916 65419932 ID=Msa0744600-mRNA-1;Parent=Msa0744600;Name=Msa0744600-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|4|0|395
chr5_1 exon 65421791 65421916 65421791 ID=Msa0744600-mRNA-1:exon:19446;Parent=Msa0744600-mRNA-1
chr5_1 exon 65421201 65421512 65421201 ID=Msa0744600-mRNA-1:exon:19445;Parent=Msa0744600-mRNA-1
chr5_1 exon 65420256 65420774 65420256 ID=Msa0744600-mRNA-1:exon:19444;Parent=Msa0744600-mRNA-1
chr5_1 exon 65419932 65420162 65419932 ID=Msa0744600-mRNA-1:exon:19443;Parent=Msa0744600-mRNA-1
chr5_1 CDS 65421791 65421916 65421791 ID=Msa0744600-mRNA-1:cds;Parent=Msa0744600-mRNA-1
chr5_1 CDS 65421201 65421512 65421201 ID=Msa0744600-mRNA-1:cds;Parent=Msa0744600-mRNA-1
chr5_1 CDS 65420256 65420774 65420256 ID=Msa0744600-mRNA-1:cds;Parent=Msa0744600-mRNA-1
chr5_1 CDS 65419932 65420162 65419932 ID=Msa0744600-mRNA-1:cds;Parent=Msa0744600-mRNA-1
Gene Sequence

>Msa0744600

ATGGATAGGAAATTAAGTATTACAACAATTGTTTTATCCTTATTGTTTGCAACGCTTGGAATAGCTCAACCTAATATCTTTGATATAAAATCATTTGGAGGAGCCTCTCATGCAGATATAACAATGGCCTTTACAAATGCTTGGAAAGCAGCATGTGGATCAACAACTGCAAGCAAAGTTATGATTCCAAGAGGGGTATACAAGATGCATGCTGTAGATGTAAAAGGTCCTTGTAAGGCTCCTATTGAAGTTCAAGTTGATGGCACAATTCAAGCACCACAAAACCCTGATGAACTTAATGATGCTTATCAATGGATTAAATTTGGATATGTTGACTATTTTACTTTATCAGGTAAAGGTGTTTTTGATGGTAATGGTGAAACTGCTTGGAGACAAAATGATTGTGGAAAAAACTCCACATGCAAGAGACGTTCCATGAACTTTGGTTTTAATTTCCTAAAGCATTCAATTGTTCGAGACATAACTTCAAAAGACAGCAAAAACTTTCATGTCAATGTTTTGGGTTGCACCAACTTCACATTTGATAGTGTCACCATAACTGCTCCAGTTACAAGCATAAACACTGATGGAATACACATTGGAAGATCAACTGATGTGAAAGTTCTCAACACAAACATTGCTACTGGAGATGATTGTGTCTCATTGGGAGATGGAAGCAGACAAATAACTGTCCAAAATGTGAATTGTGGACCTGGCCATGGAATTAGTGTTGGAAGCTTAGGAAAGTATCCAAAAGAAGAAGCTGTTGAACACGTTCTAGTCAAGAATTGCACCATCACAAATACTGACAATGGTGTGAGGATCAAGACCTGGCCTAGTTCTCCGGGAACGTCTCCGATTACTGATATGCATTTTGAAGATATTATCATGGTTAATGTCCTAAACCCAGTGATCATTGACCAAGAGTATTGTCCTTGGAATCAATGCTCAAAACTGGTTCCATCAAAAATAAAGATTAGCAAAGTTATCTTCAAGAACATCAGGGGCACTTCAAAGACCAAGGATGGAGTGGTTCTTATATGTAGCAAGAGTTTTCCATGTGATGCTGTTGAGCTAAATAATGTTGCTCTTACATTTAATGGAGCTCCAGTAAACGCTAAATGTGTTAATGTCAAGCCTATTCTTACCGGACCGACTCCTAAATGCACAACTGCAGCAGAAGCTTAG
Protein sequence

>Msa0744600

MDRKLSITTIVLSLLFATLGIAQPNIFDIKSFGGASHADITMAFTNAWKAACGSTTASKVMIPRGVYKMHAVDVKGPCKAPIEVQVDGTIQAPQNPDELNDAYQWIKFGYVDYFTLSGKGVFDGNGETAWRQNDCGKNSTCKRRSMNFGFNFLKHSIVRDITSKDSKNFHVNVLGCTNFTFDSVTITAPVTSINTDGIHIGRSTDVKVLNTNIATGDDCVSLGDGSRQITVQNVNCGPGHGISVGSLGKYPKEEAVEHVLVKNCTITNTDNGVRIKTWPSSPGTSPITDMHFEDIIMVNVLNPVIIDQEYCPWNQCSKLVPSKIKISKVIFKNIRGTSKTKDGVVLICSKSFPCDAVELNNVALTFNGAPVNAKCVNVKPILTGPTPKCTTAAEA*