AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0865780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0865780 MtrunA17_Chr5g0447901 91.304 322 24 3 1 320 1 320 0.0 600
Msa0865780 MtrunA17_Chr2g0307811 63.683 391 136 2 4 389 2 391 0.0 511
Msa0865780 MtrunA17_Chr2g0307831 62.148 391 142 2 4 389 2 391 1.12e-179 506
Msa0865780 MtrunA17_Chr2g0307821 62.148 391 142 2 4 389 2 391 1.12e-179 506
Msa0865780 MtrunA17_Chr8g0348981 40.496 363 207 5 10 364 7 368 2.85e-86 267
Msa0865780 MtrunA17_Chr7g0230891 36.702 376 232 4 5 378 15 386 2.77e-83 259
Msa0865780 MtrunA17_Chr1g0195221 40.800 375 196 11 26 384 34 398 7.56e-83 259
Msa0865780 MtrunA17_Chr4g0067631 40.054 367 209 7 26 384 51 414 1.43e-80 253
Msa0865780 MtrunA17_Chr2g0303941 38.211 369 217 7 12 377 16 376 3.10e-78 246
Msa0865780 MtrunA17_Chr4g0043431 38.757 338 203 4 39 375 49 383 8.02e-77 243
Msa0865780 MtrunA17_Chr2g0295451 40.924 303 168 7 26 320 52 351 1.57e-72 231
Msa0865780 MtrunA17_Chr1g0173451 34.328 402 245 11 2 394 49 440 4.45e-71 230
Msa0865780 MtrunA17_Chr2g0330221 54.450 191 87 0 5 195 3 193 5.38e-71 221
Msa0865780 MtrunA17_Chr2g0332801 35.014 357 222 7 25 375 60 412 2.22e-69 225
Msa0865780 MtrunA17_Chr3g0121881 37.363 364 207 11 27 379 33 386 7.38e-68 220
Msa0865780 MtrunA17_Chr5g0425811 38.889 270 158 3 43 311 3 266 7.54e-68 216
Msa0865780 MtrunA17_Chr6g0449961 38.109 349 200 11 22 364 40 378 1.20e-66 217
Msa0865780 MtrunA17_Chr4g0043661 36.090 399 220 13 11 388 6 390 1.33e-66 216
Msa0865780 MtrunA17_Chr2g0291841 37.386 329 201 5 58 384 29 354 1.95e-66 215
Msa0865780 MtrunA17_Chr4g0020771 35.200 375 228 10 26 390 73 442 8.51e-66 216
Msa0865780 MtrunA17_Chr7g0270361 35.127 353 212 9 26 364 66 415 1.60e-64 213
Msa0865780 MtrunA17_Chr6g0461181 33.902 410 213 12 25 387 31 429 2.36e-64 212
Msa0865780 MtrunA17_Chr4g0052621 35.411 353 210 8 26 364 64 412 3.64e-64 212
Msa0865780 MtrunA17_Chr5g0413141 37.465 355 202 8 23 364 55 402 5.58e-64 211
Msa0865780 MtrunA17_Chr8g0365901 33.509 379 238 8 26 394 64 438 3.55e-63 209
Msa0865780 MtrunA17_Chr1g0194231 35.593 354 210 9 26 364 80 430 3.08e-62 207
Msa0865780 MtrunA17_Chr3g0121891 36.288 361 209 9 27 376 29 379 2.94e-61 202
Msa0865780 MtrunA17_Chr5g0418411 34.584 373 222 10 27 387 29 391 4.83e-60 199
Msa0865780 MtrunA17_Chr3g0093011 43.363 226 125 2 141 364 7 231 1.00e-59 194
Msa0865780 MtrunA17_Chr2g0332971 34.341 364 226 8 9 362 10 370 1.99e-59 198
Msa0865780 MtrunA17_Chr8g0337581 37.037 351 198 10 43 387 51 384 2.27e-59 197
Msa0865780 MtrunA17_Chr3g0089021 36.544 353 213 8 43 389 89 436 7.93e-59 197
Msa0865780 MtrunA17_Chr1g0150301 35.511 352 212 9 34 379 36 378 2.96e-58 194
Msa0865780 MtrunA17_Chr8g0337571 34.054 370 220 10 26 387 30 383 2.81e-57 192
Msa0865780 MtrunA17_Chr2g0293681 37.538 325 184 8 26 336 66 385 3.59e-57 192
Msa0865780 MtrunA17_Chr7g0257701 37.234 282 163 8 36 311 107 380 6.28e-57 191
Msa0865780 MtrunA17_Chr7g0228411 32.997 397 229 13 23 388 36 426 2.33e-56 191
Msa0865780 MtrunA17_Chr1g0150291 33.973 365 224 9 27 383 45 400 1.57e-55 188
Msa0865780 MtrunA17_Chr4g0018151 34.316 373 220 13 26 387 77 435 1.33e-54 186
Msa0865780 MtrunA17_Chr7g0257721 37.838 259 155 4 26 279 75 332 1.08e-53 181
Msa0865780 MtrunA17_Chr5g0413411 33.065 372 210 9 26 364 120 485 4.45e-53 184
Msa0865780 MtrunA17_Chr8g0365891 34.316 373 203 11 27 364 107 472 5.67e-52 181
Msa0865780 MtrunA17_Chr3g0100091 35.806 310 175 6 86 387 48 341 6.09e-50 172
Msa0865780 MtrunA17_Chr8g0336481 37.868 272 150 7 84 351 14 270 1.43e-45 158
Msa0865780 MtrunA17_Chr8g0337351 46.711 152 80 1 161 312 4 154 3.37e-41 143
Msa0865780 MtrunA17_Chr8g0337601 38.462 234 130 5 158 387 12 235 2.13e-39 140
Msa0865780 MtrunA17_Chr8g0337521 34.752 282 163 8 7 281 10 277 2.83e-39 142
Msa0865780 MtrunA17_Chr8g0337511 39.487 195 112 3 158 352 15 203 3.39e-37 135
Msa0865780 MtrunA17_Chr1g0149241 27.446 368 220 10 19 379 21 348 7.57e-32 124
Msa0865780 MtrunA17_Chr8g0337551 44.776 134 70 1 152 281 5 138 3.23e-29 110
Msa0865780 MtrunA17_Chr7g0273191 36.567 134 83 1 130 261 5 138 1.93e-24 98.2
Msa0865780 MtrunA17_Chr3g0093021 34.395 157 95 4 10 161 7 160 1.49e-22 93.6
Msa0865780 MtrunA17_Chr7g0257711 33.929 112 71 3 283 391 4 115 1.43e-13 67.0
Msa0865780 MtrunA17_Chr8g0337541 31.148 122 77 5 26 141 30 150 5.40e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0865780 AT3G07820.1 49.123 399 191 6 1 395 1 391 1.10e-134 391
Msa0865780 AT3G07840.1 48.387 403 186 6 5 395 7 399 6.13e-133 387
Msa0865780 AT5G48140.1 49.465 374 180 4 14 384 12 379 2.29e-128 375
Msa0865780 AT3G07830.1 46.632 386 198 4 1 384 1 380 2.38e-125 367
Msa0865780 AT3G14040.1 45.706 361 192 3 27 384 71 430 2.30e-110 331
Msa0865780 AT3G07850.1 48.036 331 168 3 57 384 100 429 1.32e-109 329
Msa0865780 AT4G18180.1 46.132 349 183 3 26 369 38 386 1.59e-107 323
Msa0865780 AT1G17150.1 43.590 390 210 5 11 391 14 402 8.19e-105 315
Msa0865780 AT2G33160.1 43.243 370 202 5 22 384 27 395 3.50e-100 311
Msa0865780 AT1G78400.1 42.703 370 205 4 26 389 34 402 1.15e-97 297
Msa0865780 AT1G43080.1 40.519 385 217 6 6 379 7 390 4.01e-96 293
Msa0865780 AT4G13760.1 40.860 372 211 5 5 368 6 376 7.20e-96 292
Msa0865780 AT1G43090.1 40.513 390 220 6 6 384 7 395 1.29e-95 293
Msa0865780 AT1G43100.1 40.256 390 221 6 6 384 7 395 7.55e-94 288
Msa0865780 AT2G15460.1 39.267 382 223 5 11 384 15 395 1.79e-93 286
Msa0865780 AT2G26620.1 41.341 358 206 3 14 368 18 374 5.52e-93 285
Msa0865780 AT2G15450.1 38.817 389 227 6 11 389 15 402 1.20e-92 284
Msa0865780 AT2G40310.1 39.370 381 222 5 12 384 16 395 1.36e-91 281
Msa0865780 AT2G15470.1 38.482 382 226 5 11 384 15 395 7.82e-91 280
Msa0865780 AT1G05660.1 39.108 381 220 6 5 377 1 377 5.84e-90 277
Msa0865780 AT2G43890.1 38.158 380 225 5 11 384 9 384 1.01e-89 276
Msa0865780 AT1G05650.1 38.978 372 219 6 10 377 10 377 3.63e-89 275
Msa0865780 AT1G02790.1 40.470 383 204 6 22 389 47 420 2.85e-87 271
Msa0865780 AT2G43870.1 38.743 382 225 7 7 384 1 377 3.70e-85 264
Msa0865780 AT2G43880.1 39.722 360 211 4 27 384 31 386 1.56e-81 255
Msa0865780 AT3G59850.1 38.810 353 208 6 27 375 23 371 4.19e-80 251
Msa0865780 AT3G59850.2 38.810 353 208 6 27 375 67 415 6.89e-80 252
Msa0865780 AT2G41850.1 35.677 384 231 9 16 391 57 432 3.42e-76 243
Msa0865780 AT1G65570.1 36.316 380 232 8 5 378 8 383 7.48e-74 236
Msa0865780 AT3G57510.1 34.625 387 239 9 11 390 52 431 4.00e-73 234
Msa0865780 AT1G80170.1 36.994 346 208 6 26 364 52 394 7.10e-72 232
Msa0865780 AT1G70500.1 36.267 375 225 8 25 389 65 435 1.45e-71 232
Msa0865780 AT2G43880.2 41.667 288 162 4 27 312 31 314 2.68e-70 224
Msa0865780 AT2G43860.1 36.856 369 221 9 15 377 21 383 7.84e-70 225
Msa0865780 AT1G48100.1 35.511 352 211 7 26 364 79 427 7.66e-69 225
Msa0865780 AT1G56710.1 35.750 400 218 11 1 364 1 397 9.01e-69 223
Msa0865780 AT3G07970.1 34.483 377 236 8 22 390 66 439 5.17e-68 222
Msa0865780 AT1G23460.2 35.200 375 229 8 25 389 41 411 2.78e-67 219
Msa0865780 AT1G23460.1 35.200 375 229 8 25 389 65 435 4.55e-67 220
Msa0865780 AT5G44840.1 35.904 376 223 9 11 378 10 375 4.56e-67 218
Msa0865780 AT4G35670.1 35.340 382 230 9 6 379 3 375 2.03e-64 211
Msa0865780 AT5G27530.1 34.987 383 222 10 6 379 32 396 3.79e-64 212
Msa0865780 AT3G15720.1 34.197 386 233 9 12 387 10 384 4.28e-64 212
Msa0865780 AT3G15720.3 34.197 386 233 9 12 387 9 383 5.27e-64 212
Msa0865780 AT3G15720.2 34.456 386 229 9 12 387 9 380 1.66e-63 210
Msa0865780 AT1G02460.1 34.358 358 212 11 26 364 88 441 1.61e-58 198
Msa0865780 AT5G44830.1 36.336 333 188 8 52 378 2 316 2.49e-58 193
Msa0865780 AT4G32380.1 33.594 384 227 11 10 375 5 378 4.00e-58 196
Msa0865780 AT4G01890.1 33.983 359 212 12 26 364 64 417 8.09e-58 196
Msa0865780 AT3G26610.1 34.844 353 216 8 26 369 66 413 8.92e-58 196
Msa0865780 AT5G14650.1 33.889 360 223 10 25 381 52 399 1.17e-57 194
Msa0865780 AT5G39910.1 32.951 349 167 7 25 364 34 324 1.74e-56 190
Msa0865780 AT3G15720.4 34.756 328 197 6 67 387 3 320 3.37e-55 187
Msa0865780 AT1G80170.2 37.500 264 157 5 26 282 52 314 7.19e-55 184
Msa0865780 AT1G60590.1 32.258 372 214 9 27 364 123 490 1.93e-54 189
Msa0865780 AT1G80140.1 35.987 314 183 8 60 365 4 307 3.89e-53 180
Msa0865780 AT5G17200.1 33.083 399 226 13 20 389 32 418 3.05e-52 180
Msa0865780 AT1G10640.1 32.615 371 215 8 25 364 117 483 5.22e-52 182
Msa0865780 AT4G35670.2 36.594 276 165 4 105 379 2 268 2.74e-50 171
Msa0865780 AT4G32375.1 32.847 274 173 4 105 375 13 278 5.56e-48 169
Msa0865780 AT4G32380.2 33.636 330 198 9 10 327 5 325 6.89e-48 168
Msa0865780 AT4G32370.1 33.333 324 190 10 2 310 10 322 1.18e-47 166
Msa0865780 AT5G14650.2 35.081 248 155 5 34 278 60 304 2.79e-40 145
Msa0865780 AT5G41870.1 26.042 288 168 11 26 277 44 322 5.33e-12 67.4
Msa0865780 AT3G48950.1 26.901 171 106 4 120 277 159 323 3.81e-11 65.1

Find 79 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGTTGCTCTTACATTTAA+TGG 0.122345 5_4:+66973419 Msa0865780:CDS
GCTTATCAATGGATTAAATT+TGG 0.144207 5_4:+66972121 Msa0865780:CDS
AAACTTTCATGTCAATGTTT+TGG 0.199633 5_4:+66972745 Msa0865780:CDS
TGTTCAACAGCTTCTTCTTT+TGG 0.257521 5_4:-66972995 None:intergenic
TTAACACATTTAGCGTTTAC+TGG 0.264248 5_4:-66973446 None:intergenic
TCTGCTGCAGTTGTGCATTT+AGG 0.268564 5_4:-66973497 None:intergenic
ATCTTTGATATAAAATCATT+TGG 0.321131 5_4:+66971615 Msa0865780:CDS
CTCGAACAATTGAATGCTTT+AGG 0.322592 5_4:-66972700 None:intergenic
CAGGTCCACAATTCACATTT+TGG 0.326679 5_4:-66972937 None:intergenic
TCAGTGTTTATGCTTGTAAC+TGG 0.338580 5_4:-66972809 None:intergenic
TCCTTATTGTTTGCAACGCT+TGG 0.346075 5_4:+66971576 Msa0865780:CDS
GGTCAATGATCACTGGGTTT+AGG 0.350968 5_4:-66973144 None:intergenic
TCCAAGCGTTGCAAACAATA+AGG 0.351732 5_4:-66971577 None:intergenic
CCTATTGAAGTTCAAGTTGA+TGG 0.376197 5_4:+66972058 Msa0865780:CDS
GGAATTAGTGTTGGAAGCTT+AGG 0.384131 5_4:+66972965 Msa0865780:CDS
TAAGCATCATTAAGTTCATC+AGG 0.384599 5_4:-66972103 None:intergenic
CAAGACCTGGCCTAGTTCTC+CGG 0.386266 5_4:+66973069 Msa0865780:CDS
TCAGTAATCGGAGACGTTCC+CGG 0.393664 5_4:-66973088 None:intergenic
TTGGAATCAATGCTCAAAAC+TGG 0.406184 5_4:+66973180 Msa0865780:CDS
ATGCATGCTGTAGATGTAAA+AGG 0.415509 5_4:+66972022 Msa0865780:CDS
CCATCAACTTGAACTTCAAT+AGG 0.415583 5_4:-66972058 None:intergenic
TCAAAATGCATATCAGTAAT+CGG 0.423258 5_4:-66973100 None:intergenic
AAGTTATCTTCAAGAACATC+AGG 0.426204 5_4:+66973321 Msa0865780:CDS
TTTCAATGTGAACAGAACTT+TGG 0.426227 5_4:+66972668 Msa0865780:intron
TGGAGATGATTGTGTCTCAT+TGG 0.430112 5_4:+66972889 Msa0865780:CDS
ATTAGGCCTTTACAAATGCT+TGG 0.431043 5_4:+66971939 Msa0865780:intron
TACTCTTGGTCAATGATCAC+TGG 0.438721 5_4:-66973151 None:intergenic
TGCATCTTGTATACCCCTCT+TGG 0.440904 5_4:-66972004 None:intergenic
AACTTAATGATGCTTATCAA+TGG 0.446303 5_4:+66972110 Msa0865780:CDS
GCTTGTAACTGGAGCAGTTA+TGG 0.462422 5_4:-66972798 None:intergenic
AATGTCGAGCCTATTCTTAC+CGG 0.477496 5_4:+66973467 Msa0865780:CDS
GGAGACGTTCCCGGAGAACT+AGG 0.494257 5_4:-66973079 None:intergenic
CTCAACACAAACATTGCTAC+TGG 0.495907 5_4:+66972869 Msa0865780:CDS
GATTCCAAGGACAATACTCT+TGG 0.504808 5_4:-66973165 None:intergenic
TATAAGAACCACTCCATCCT+TGG 0.505187 5_4:-66973357 None:intergenic
GGAGTCGGTCCGGTAAGAAT+AGG 0.510758 5_4:-66973476 None:intergenic
TGCTTTCCAAGCATTTGTAA+AGG 0.512646 5_4:-66971945 None:intergenic
TTGACCAAGAGTATTGTCCT+TGG 0.513299 5_4:+66973161 Msa0865780:CDS
ATGGTAATGGTGAAACTGCT+TGG 0.513617 5_4:+66972185 Msa0865780:CDS
TTTGATATAAAATCATTTGG+AGG 0.515308 5_4:+66971618 Msa0865780:CDS
AGATGTAAAAGGTCCTTGTA+AGG 0.526895 5_4:+66972033 Msa0865780:CDS
GGCACTTCAAAGACCAAGGA+TGG 0.536177 5_4:+66973344 Msa0865780:CDS
ACTTCAATAGGAGCCTTACA+AGG 0.540286 5_4:-66972046 None:intergenic
AAGACCTGGCCTAGTTCTCC+GGG 0.541102 5_4:+66973070 Msa0865780:CDS
GCAGTTGTGCATTTAGGAGT+CGG 0.541127 5_4:-66973491 None:intergenic
AACTAATAATCAACATGGAT+AGG 0.549661 5_4:+66971526 None:intergenic
GACACTATCAAATGTGAAGT+TGG 0.550914 5_4:-66972774 None:intergenic
GTGAATTGTGGACCTGGCCA+TGG 0.551852 5_4:+66972944 Msa0865780:CDS
GGAGATGATTGTGTCTCATT+GGG 0.552814 5_4:+66972890 Msa0865780:CDS
TGTGCATTTAGGAGTCGGTC+CGG 0.554007 5_4:-66973486 None:intergenic
CATTGTTATATCTGCATGAG+AGG 0.557573 5_4:-66971643 None:intergenic
GTTACAAGCATAAACACTGA+TGG 0.562557 5_4:+66972812 Msa0865780:CDS
AGCTTCCAACACTAATTCCA+TGG 0.570135 5_4:-66972961 None:intergenic
ACTCTTGGTCAATGATCACT+GGG 0.572903 5_4:-66973150 None:intergenic
AACACTGATGGAATACACAT+TGG 0.573807 5_4:+66972824 Msa0865780:CDS
CGTTCCCGGAGAACTAGGCC+AGG 0.584285 5_4:-66973074 None:intergenic
GCTTGGAGACAAAATGATTG+TGG 0.586530 5_4:+66972202 Msa0865780:CDS
CCTGGCCATGGAATTAGTGT+TGG 0.589051 5_4:+66972956 Msa0865780:CDS
AGCAAAGTTATGATTCCAAG+AGG 0.591832 5_4:+66971989 Msa0865780:CDS
CAAAATGTGAATTGTGGACC+TGG 0.593835 5_4:+66972938 Msa0865780:CDS
CCAACACTAATTCCATGGCC+AGG 0.596782 5_4:-66972956 None:intergenic
TTTAGCTCAACAGCATCACA+TGG 0.598331 5_4:-66973395 None:intergenic
GATTGTGTCTCATTGGGAGA+TGG 0.609787 5_4:+66972896 Msa0865780:CDS
AAGCATCATTAAGTTCATCA+GGG 0.611991 5_4:-66972102 None:intergenic
TTCAAAGACCAAGGATGGAG+TGG 0.613535 5_4:+66973349 Msa0865780:CDS
CACATGCAAGAGACGTTCCA+TGG 0.616857 5_4:+66972234 Msa0865780:CDS
CAAAGTTATGATTCCAAGAG+GGG 0.618993 5_4:+66971991 Msa0865780:CDS
GCAAAGTTATGATTCCAAGA+GGG 0.620573 5_4:+66971990 Msa0865780:CDS
ACCATCACAAATACTGACAA+TGG 0.631144 5_4:+66973037 Msa0865780:CDS
CATGGAACGTCTCTTGCATG+TGG 0.636591 5_4:-66972233 None:intergenic
AGTTATCTTCAAGAACATCA+GGG 0.642521 5_4:+66973322 Msa0865780:CDS
ACCATTGTCAGTATTTGTGA+TGG 0.650695 5_4:-66973038 None:intergenic
CTCTCATGCAGATATAACAA+TGG 0.652149 5_4:+66971644 Msa0865780:CDS
AATGCTTGGAAAGCAGCATG+TGG 0.653455 5_4:+66971953 Msa0865780:CDS
ATGGTGTGAGGATCAAGACC+TGG 0.668470 5_4:+66973056 Msa0865780:CDS
CAGGGGCACTTCAAAGACCA+AGG 0.672890 5_4:+66973340 Msa0865780:CDS
GTTATCTTCAAGAACATCAG+GGG 0.677796 5_4:+66973323 Msa0865780:CDS
CAAATACTGACAATGGTGTG+AGG 0.682831 5_4:+66973044 Msa0865780:CDS
ACTGTCCAAAATGTGAATTG+TGG 0.683587 5_4:+66972932 Msa0865780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAATAAAAATTATCAATT+TGG - chr5_4:66972539-66972558 None:intergenic 10.0%
!!! TATTATATATTATTTTTTCC+AGG + chr5_4:66973274-66973293 Msa0865780:intron 10.0%
!! AAGAATAAAAATTATCAATT+TGG - chr5_4:66972539-66972558 None:intergenic 10.0%
!!! TATTATATATTATTTTTTCC+AGG + chr5_4:66973274-66973293 Msa0865780:intron 10.0%
!!! GATTTTATATCAAAGATATT+AGG - chr5_4:66971612-66971631 None:intergenic 15.0%
!! ATCTTTGATATAAAATCATT+TGG + chr5_4:66971615-66971634 Msa0865780:CDS 15.0%
!! AAAAATTAGTGATTTCTATA+AGG + chr5_4:66971684-66971703 Msa0865780:intron 15.0%
!! AAAATTAGTGATTTCTATAA+GGG + chr5_4:66971685-66971704 Msa0865780:intron 15.0%
!! AAATTTGAACTTAGATAAAA+TGG - chr5_4:66971766-66971785 None:intergenic 15.0%
!!! TAAATTATTTTCATTTACCA+TGG - chr5_4:66972254-66972273 None:intergenic 15.0%
!! AAAATACACAAAAAACTATT+TGG - chr5_4:66972568-66972587 None:intergenic 15.0%
!!! TATTTTCTCAATAACTAATT+TGG + chr5_4:66972582-66972601 Msa0865780:intron 15.0%
!!! GATTTTATATCAAAGATATT+AGG - chr5_4:66971612-66971631 None:intergenic 15.0%
!! ATCTTTGATATAAAATCATT+TGG + chr5_4:66971615-66971634 Msa0865780:CDS 15.0%
!! AAAAATTAGTGATTTCTATA+AGG + chr5_4:66971684-66971703 Msa0865780:intron 15.0%
!! AAAATTAGTGATTTCTATAA+GGG + chr5_4:66971685-66971704 Msa0865780:intron 15.0%
!! AAATTTGAACTTAGATAAAA+TGG - chr5_4:66971766-66971785 None:intergenic 15.0%
!!! TAAATTATTTTCATTTACCA+TGG - chr5_4:66972254-66972273 None:intergenic 15.0%
!! AAAATACACAAAAAACTATT+TGG - chr5_4:66972568-66972587 None:intergenic 15.0%
!!! TATTTTCTCAATAACTAATT+TGG + chr5_4:66972582-66972601 Msa0865780:intron 15.0%
!! TTTGATATAAAATCATTTGG+AGG + chr5_4:66971618-66971637 Msa0865780:CDS 20.0%
!!! GTTCAAATTTTTTTTGTCTT+AGG + chr5_4:66971776-66971795 Msa0865780:intron 20.0%
!!! AATTTTAAGAGTGACATATT+TGG - chr5_4:66971850-66971869 None:intergenic 20.0%
!! ATGTTATCAATATCATTGTA+TGG + chr5_4:66971877-66971896 Msa0865780:intron 20.0%
!!! TATTTTACTTTATCAGGTAA+AGG + chr5_4:66972154-66972173 Msa0865780:CDS 20.0%
!! AGTAAATTTGATGTTGTATT+TGG + chr5_4:66972382-66972401 Msa0865780:intron 20.0%
!!! TTGCTAATCTTTATTTTTGA+TGG - chr5_4:66973302-66973321 None:intergenic 20.0%
!! TTTGATATAAAATCATTTGG+AGG + chr5_4:66971618-66971637 Msa0865780:CDS 20.0%
!!! GTTCAAATTTTTTTTGTCTT+AGG + chr5_4:66971776-66971795 Msa0865780:intron 20.0%
!!! AATTTTAAGAGTGACATATT+TGG - chr5_4:66971850-66971869 None:intergenic 20.0%
!! ATGTTATCAATATCATTGTA+TGG + chr5_4:66971877-66971896 Msa0865780:intron 20.0%
!!! TATTTTACTTTATCAGGTAA+AGG + chr5_4:66972154-66972173 Msa0865780:CDS 20.0%
!! AGTAAATTTGATGTTGTATT+TGG + chr5_4:66972382-66972401 Msa0865780:intron 20.0%
!!! TTGCTAATCTTTATTTTTGA+TGG - chr5_4:66973302-66973321 None:intergenic 20.0%
! TGAACTTAGATAAAATGGTA+TGG - chr5_4:66971761-66971780 None:intergenic 25.0%
! AACTTAATGATGCTTATCAA+TGG + chr5_4:66972110-66972129 Msa0865780:CDS 25.0%
!!! GCTTATCAATGGATTAAATT+TGG + chr5_4:66972121-66972140 Msa0865780:CDS 25.0%
!! GTTGACTATTTTACTTTATC+AGG + chr5_4:66972148-66972167 Msa0865780:CDS 25.0%
!! ATTTTCATTTCAATGCTACT+CGG + chr5_4:66972277-66972296 Msa0865780:intron 25.0%
! ATATGTAACATTGAAAATCG+AGG - chr5_4:66972358-66972377 None:intergenic 25.0%
! TCTCTTAAAATCTCAAATAC+CGG + chr5_4:66972428-66972447 Msa0865780:intron 25.0%
! CTATAAAAAACTATCTTGAC+CGG - chr5_4:66972450-66972469 None:intergenic 25.0%
!! AAACTTTCATGTCAATGTTT+TGG + chr5_4:66972745-66972764 Msa0865780:CDS 25.0%
!! AACTTTCATGTCAATGTTTT+GGG + chr5_4:66972746-66972765 Msa0865780:CDS 25.0%
! TCAAAATGCATATCAGTAAT+CGG - chr5_4:66973103-66973122 None:intergenic 25.0%
!!! GCATTTTGAAGATATTATCA+TGG + chr5_4:66973114-66973133 Msa0865780:CDS 25.0%
! AATGTTGCTCTTACATTTAA+TGG + chr5_4:66973419-66973438 Msa0865780:CDS 25.0%
! TGAACTTAGATAAAATGGTA+TGG - chr5_4:66971761-66971780 None:intergenic 25.0%
! AACTTAATGATGCTTATCAA+TGG + chr5_4:66972110-66972129 Msa0865780:CDS 25.0%
!!! GCTTATCAATGGATTAAATT+TGG + chr5_4:66972121-66972140 Msa0865780:CDS 25.0%
!! GTTGACTATTTTACTTTATC+AGG + chr5_4:66972148-66972167 Msa0865780:CDS 25.0%
!! ATTTTCATTTCAATGCTACT+CGG + chr5_4:66972277-66972296 Msa0865780:intron 25.0%
! ATATGTAACATTGAAAATCG+AGG - chr5_4:66972358-66972377 None:intergenic 25.0%
! TCTCTTAAAATCTCAAATAC+CGG + chr5_4:66972428-66972447 Msa0865780:intron 25.0%
! CTATAAAAAACTATCTTGAC+CGG - chr5_4:66972450-66972469 None:intergenic 25.0%
!! AAACTTTCATGTCAATGTTT+TGG + chr5_4:66972745-66972764 Msa0865780:CDS 25.0%
!! AACTTTCATGTCAATGTTTT+GGG + chr5_4:66972746-66972765 Msa0865780:CDS 25.0%
! TCAAAATGCATATCAGTAAT+CGG - chr5_4:66973103-66973122 None:intergenic 25.0%
!!! GCATTTTGAAGATATTATCA+TGG + chr5_4:66973114-66973133 Msa0865780:CDS 25.0%
! AATGTTGCTCTTACATTTAA+TGG + chr5_4:66973419-66973438 Msa0865780:CDS 25.0%
ATTAGTGATTTCTATAAGGG+TGG + chr5_4:66971688-66971707 Msa0865780:intron 30.0%
!!! TTTTTTTGTCTTAGGTCGAA+TGG + chr5_4:66971784-66971803 Msa0865780:intron 30.0%
GCTAATATGTTGTGTCAATT+AGG + chr5_4:66971922-66971941 Msa0865780:intron 30.0%
AAGCATCATTAAGTTCATCA+GGG - chr5_4:66972105-66972124 None:intergenic 30.0%
TAAGCATCATTAAGTTCATC+AGG - chr5_4:66972106-66972125 None:intergenic 30.0%
!!! AAAGGTGTTTTTGATGGTAA+TGG + chr5_4:66972172-66972191 Msa0865780:CDS 30.0%
TTTCAATGTGAACAGAACTT+TGG + chr5_4:66972668-66972687 Msa0865780:intron 30.0%
TTGAAACATTCAACATAGTG+AGG + chr5_4:66973251-66973270 Msa0865780:intron 30.0%
!!! TCTTTATTTTTGATGGAACC+TGG - chr5_4:66973295-66973314 None:intergenic 30.0%
AAGTTATCTTCAAGAACATC+AGG + chr5_4:66973321-66973340 Msa0865780:CDS 30.0%
AGTTATCTTCAAGAACATCA+GGG + chr5_4:66973322-66973341 Msa0865780:CDS 30.0%
TTAACACATTTAGCGTTTAC+TGG - chr5_4:66973449-66973468 None:intergenic 30.0%
ATTAGTGATTTCTATAAGGG+TGG + chr5_4:66971688-66971707 Msa0865780:intron 30.0%
!!! TTTTTTTGTCTTAGGTCGAA+TGG + chr5_4:66971784-66971803 Msa0865780:intron 30.0%
GCTAATATGTTGTGTCAATT+AGG + chr5_4:66971922-66971941 Msa0865780:intron 30.0%
AAGCATCATTAAGTTCATCA+GGG - chr5_4:66972105-66972124 None:intergenic 30.0%
TAAGCATCATTAAGTTCATC+AGG - chr5_4:66972106-66972125 None:intergenic 30.0%
!!! AAAGGTGTTTTTGATGGTAA+TGG + chr5_4:66972172-66972191 Msa0865780:CDS 30.0%
TTTCAATGTGAACAGAACTT+TGG + chr5_4:66972668-66972687 Msa0865780:intron 30.0%
TTGAAACATTCAACATAGTG+AGG + chr5_4:66973251-66973270 Msa0865780:intron 30.0%
!!! TCTTTATTTTTGATGGAACC+TGG - chr5_4:66973295-66973314 None:intergenic 30.0%
AAGTTATCTTCAAGAACATC+AGG + chr5_4:66973321-66973340 Msa0865780:CDS 30.0%
AGTTATCTTCAAGAACATCA+GGG + chr5_4:66973322-66973341 Msa0865780:CDS 30.0%
TTAACACATTTAGCGTTTAC+TGG - chr5_4:66973449-66973468 None:intergenic 30.0%
CATTGTTATATCTGCATGAG+AGG - chr5_4:66971646-66971665 None:intergenic 35.0%
CTCTCATGCAGATATAACAA+TGG + chr5_4:66971644-66971663 Msa0865780:CDS 35.0%
CAATTTATGCAGTACTGTAG+AGG + chr5_4:66971822-66971841 Msa0865780:intron 35.0%
ATTAGGCCTTTACAAATGCT+TGG + chr5_4:66971939-66971958 Msa0865780:intron 35.0%
TGCTTTCCAAGCATTTGTAA+AGG - chr5_4:66971948-66971967 None:intergenic 35.0%
AGCAAAGTTATGATTCCAAG+AGG + chr5_4:66971989-66972008 Msa0865780:CDS 35.0%
GCAAAGTTATGATTCCAAGA+GGG + chr5_4:66971990-66972009 Msa0865780:CDS 35.0%
CAAAGTTATGATTCCAAGAG+GGG + chr5_4:66971991-66972010 Msa0865780:CDS 35.0%
ATGCATGCTGTAGATGTAAA+AGG + chr5_4:66972022-66972041 Msa0865780:CDS 35.0%
AGATGTAAAAGGTCCTTGTA+AGG + chr5_4:66972033-66972052 Msa0865780:CDS 35.0%
CCATCAACTTGAACTTCAAT+AGG - chr5_4:66972061-66972080 None:intergenic 35.0%
!! CCTATTGAAGTTCAAGTTGA+TGG + chr5_4:66972058-66972077 Msa0865780:CDS 35.0%
! TTAAGTTCATCAGGGTTTTG+TGG - chr5_4:66972097-66972116 None:intergenic 35.0%
!!! TCAGGTAAAGGTGTTTTTGA+TGG + chr5_4:66972166-66972185 Msa0865780:CDS 35.0%
CTCGAACAATTGAATGCTTT+AGG - chr5_4:66972703-66972722 None:intergenic 35.0%
GACACTATCAAATGTGAAGT+TGG - chr5_4:66972777-66972796 None:intergenic 35.0%
TCAGTGTTTATGCTTGTAAC+TGG - chr5_4:66972812-66972831 None:intergenic 35.0%
GTTACAAGCATAAACACTGA+TGG + chr5_4:66972812-66972831 Msa0865780:CDS 35.0%
AACACTGATGGAATACACAT+TGG + chr5_4:66972824-66972843 Msa0865780:CDS 35.0%
ACTGTCCAAAATGTGAATTG+TGG + chr5_4:66972932-66972951 Msa0865780:CDS 35.0%
! TGTTCAACAGCTTCTTCTTT+TGG - chr5_4:66972998-66973017 None:intergenic 35.0%
ACCATCACAAATACTGACAA+TGG + chr5_4:66973037-66973056 Msa0865780:CDS 35.0%
ACCATTGTCAGTATTTGTGA+TGG - chr5_4:66973041-66973060 None:intergenic 35.0%
!!! AGTTTTGAGCATTGATTCCA+AGG - chr5_4:66973181-66973200 None:intergenic 35.0%
TTGGAATCAATGCTCAAAAC+TGG + chr5_4:66973180-66973199 Msa0865780:CDS 35.0%
GTTATCTTCAAGAACATCAG+GGG + chr5_4:66973323-66973342 Msa0865780:CDS 35.0%
CATTGTTATATCTGCATGAG+AGG - chr5_4:66971646-66971665 None:intergenic 35.0%
CTCTCATGCAGATATAACAA+TGG + chr5_4:66971644-66971663 Msa0865780:CDS 35.0%
CAATTTATGCAGTACTGTAG+AGG + chr5_4:66971822-66971841 Msa0865780:intron 35.0%
ATTAGGCCTTTACAAATGCT+TGG + chr5_4:66971939-66971958 Msa0865780:intron 35.0%
TGCTTTCCAAGCATTTGTAA+AGG - chr5_4:66971948-66971967 None:intergenic 35.0%
AGCAAAGTTATGATTCCAAG+AGG + chr5_4:66971989-66972008 Msa0865780:CDS 35.0%
GCAAAGTTATGATTCCAAGA+GGG + chr5_4:66971990-66972009 Msa0865780:CDS 35.0%
CAAAGTTATGATTCCAAGAG+GGG + chr5_4:66971991-66972010 Msa0865780:CDS 35.0%
ATGCATGCTGTAGATGTAAA+AGG + chr5_4:66972022-66972041 Msa0865780:CDS 35.0%
AGATGTAAAAGGTCCTTGTA+AGG + chr5_4:66972033-66972052 Msa0865780:CDS 35.0%
CCATCAACTTGAACTTCAAT+AGG - chr5_4:66972061-66972080 None:intergenic 35.0%
!! CCTATTGAAGTTCAAGTTGA+TGG + chr5_4:66972058-66972077 Msa0865780:CDS 35.0%
! TTAAGTTCATCAGGGTTTTG+TGG - chr5_4:66972097-66972116 None:intergenic 35.0%
!!! TCAGGTAAAGGTGTTTTTGA+TGG + chr5_4:66972166-66972185 Msa0865780:CDS 35.0%
CTCGAACAATTGAATGCTTT+AGG - chr5_4:66972703-66972722 None:intergenic 35.0%
GACACTATCAAATGTGAAGT+TGG - chr5_4:66972777-66972796 None:intergenic 35.0%
TCAGTGTTTATGCTTGTAAC+TGG - chr5_4:66972812-66972831 None:intergenic 35.0%
GTTACAAGCATAAACACTGA+TGG + chr5_4:66972812-66972831 Msa0865780:CDS 35.0%
AACACTGATGGAATACACAT+TGG + chr5_4:66972824-66972843 Msa0865780:CDS 35.0%
ACTGTCCAAAATGTGAATTG+TGG + chr5_4:66972932-66972951 Msa0865780:CDS 35.0%
! TGTTCAACAGCTTCTTCTTT+TGG - chr5_4:66972998-66973017 None:intergenic 35.0%
ACCATCACAAATACTGACAA+TGG + chr5_4:66973037-66973056 Msa0865780:CDS 35.0%
ACCATTGTCAGTATTTGTGA+TGG - chr5_4:66973041-66973060 None:intergenic 35.0%
!!! AGTTTTGAGCATTGATTCCA+AGG - chr5_4:66973181-66973200 None:intergenic 35.0%
TTGGAATCAATGCTCAAAAC+TGG + chr5_4:66973180-66973199 Msa0865780:CDS 35.0%
GTTATCTTCAAGAACATCAG+GGG + chr5_4:66973323-66973342 Msa0865780:CDS 35.0%
TCCTTATTGTTTGCAACGCT+TGG + chr5_4:66971576-66971595 Msa0865780:CDS 40.0%
! TCCAAGCGTTGCAAACAATA+AGG - chr5_4:66971580-66971599 None:intergenic 40.0%
ATAAGGGTGGCTCTTATGTT+AGG + chr5_4:66971701-66971720 Msa0865780:intron 40.0%
ACATCAAGTGCAGTGTTGTA+GGG - chr5_4:66971730-66971749 None:intergenic 40.0%
ACTTCAATAGGAGCCTTACA+AGG - chr5_4:66972049-66972068 None:intergenic 40.0%
!! ATGGTAATGGTGAAACTGCT+TGG + chr5_4:66972185-66972204 Msa0865780:CDS 40.0%
GCTTGGAGACAAAATGATTG+TGG + chr5_4:66972202-66972221 Msa0865780:CDS 40.0%
CTCAACACAAACATTGCTAC+TGG + chr5_4:66972869-66972888 Msa0865780:CDS 40.0%
TGGAGATGATTGTGTCTCAT+TGG + chr5_4:66972889-66972908 Msa0865780:CDS 40.0%
GGAGATGATTGTGTCTCATT+GGG + chr5_4:66972890-66972909 Msa0865780:CDS 40.0%
! CAGGTCCACAATTCACATTT+TGG - chr5_4:66972940-66972959 None:intergenic 40.0%
CAAAATGTGAATTGTGGACC+TGG + chr5_4:66972938-66972957 Msa0865780:CDS 40.0%
AGCTTCCAACACTAATTCCA+TGG - chr5_4:66972964-66972983 None:intergenic 40.0%
! GGAATTAGTGTTGGAAGCTT+AGG + chr5_4:66972965-66972984 Msa0865780:CDS 40.0%
CAAATACTGACAATGGTGTG+AGG + chr5_4:66973044-66973063 Msa0865780:CDS 40.0%
ACTCTTGGTCAATGATCACT+GGG - chr5_4:66973153-66973172 None:intergenic 40.0%
TACTCTTGGTCAATGATCAC+TGG - chr5_4:66973154-66973173 None:intergenic 40.0%
!! TTGACCAAGAGTATTGTCCT+TGG + chr5_4:66973161-66973180 Msa0865780:CDS 40.0%
GATTCCAAGGACAATACTCT+TGG - chr5_4:66973168-66973187 None:intergenic 40.0%
TATAAGAACCACTCCATCCT+TGG - chr5_4:66973360-66973379 None:intergenic 40.0%
! TTTAGCTCAACAGCATCACA+TGG - chr5_4:66973398-66973417 None:intergenic 40.0%
AATGTCGAGCCTATTCTTAC+CGG + chr5_4:66973467-66973486 Msa0865780:CDS 40.0%
TCCTTATTGTTTGCAACGCT+TGG + chr5_4:66971576-66971595 Msa0865780:CDS 40.0%
! TCCAAGCGTTGCAAACAATA+AGG - chr5_4:66971580-66971599 None:intergenic 40.0%
ATAAGGGTGGCTCTTATGTT+AGG + chr5_4:66971701-66971720 Msa0865780:intron 40.0%
ACATCAAGTGCAGTGTTGTA+GGG - chr5_4:66971730-66971749 None:intergenic 40.0%
ACTTCAATAGGAGCCTTACA+AGG - chr5_4:66972049-66972068 None:intergenic 40.0%
!! ATGGTAATGGTGAAACTGCT+TGG + chr5_4:66972185-66972204 Msa0865780:CDS 40.0%
GCTTGGAGACAAAATGATTG+TGG + chr5_4:66972202-66972221 Msa0865780:CDS 40.0%
CTCAACACAAACATTGCTAC+TGG + chr5_4:66972869-66972888 Msa0865780:CDS 40.0%
TGGAGATGATTGTGTCTCAT+TGG + chr5_4:66972889-66972908 Msa0865780:CDS 40.0%
GGAGATGATTGTGTCTCATT+GGG + chr5_4:66972890-66972909 Msa0865780:CDS 40.0%
! CAGGTCCACAATTCACATTT+TGG - chr5_4:66972940-66972959 None:intergenic 40.0%
CAAAATGTGAATTGTGGACC+TGG + chr5_4:66972938-66972957 Msa0865780:CDS 40.0%
AGCTTCCAACACTAATTCCA+TGG - chr5_4:66972964-66972983 None:intergenic 40.0%
! GGAATTAGTGTTGGAAGCTT+AGG + chr5_4:66972965-66972984 Msa0865780:CDS 40.0%
CAAATACTGACAATGGTGTG+AGG + chr5_4:66973044-66973063 Msa0865780:CDS 40.0%
ACTCTTGGTCAATGATCACT+GGG - chr5_4:66973153-66973172 None:intergenic 40.0%
TACTCTTGGTCAATGATCAC+TGG - chr5_4:66973154-66973173 None:intergenic 40.0%
!! TTGACCAAGAGTATTGTCCT+TGG + chr5_4:66973161-66973180 Msa0865780:CDS 40.0%
GATTCCAAGGACAATACTCT+TGG - chr5_4:66973168-66973187 None:intergenic 40.0%
TATAAGAACCACTCCATCCT+TGG - chr5_4:66973360-66973379 None:intergenic 40.0%
! TTTAGCTCAACAGCATCACA+TGG - chr5_4:66973398-66973417 None:intergenic 40.0%
AATGTCGAGCCTATTCTTAC+CGG + chr5_4:66973467-66973486 Msa0865780:CDS 40.0%
CATCAAGTGCAGTGTTGTAG+GGG - chr5_4:66971729-66971748 None:intergenic 45.0%
CACATCAAGTGCAGTGTTGT+AGG - chr5_4:66971731-66971750 None:intergenic 45.0%
CAACACTGCACTTGATGTGA+CGG + chr5_4:66971732-66971751 Msa0865780:intron 45.0%
CTGCATAAATTGCATGCAGC+AGG - chr5_4:66971814-66971833 None:intergenic 45.0%
AATGCTTGGAAAGCAGCATG+TGG + chr5_4:66971953-66971972 Msa0865780:CDS 45.0%
TGCATCTTGTATACCCCTCT+TGG - chr5_4:66972007-66972026 None:intergenic 45.0%
TGTGTACCAATCACTTGCGT+TGG + chr5_4:66972331-66972350 Msa0865780:intron 45.0%
GCTTGTAACTGGAGCAGTTA+TGG - chr5_4:66972801-66972820 None:intergenic 45.0%
GATTGTGTCTCATTGGGAGA+TGG + chr5_4:66972896-66972915 Msa0865780:CDS 45.0%
GGTCAATGATCACTGGGTTT+AGG - chr5_4:66973147-66973166 None:intergenic 45.0%
TTCAAAGACCAAGGATGGAG+TGG + chr5_4:66973349-66973368 Msa0865780:CDS 45.0%
GCAGTTGTGCATTTAGGAGT+CGG - chr5_4:66973494-66973513 None:intergenic 45.0%
TCTGCTGCAGTTGTGCATTT+AGG - chr5_4:66973500-66973519 None:intergenic 45.0%
CATCAAGTGCAGTGTTGTAG+GGG - chr5_4:66971729-66971748 None:intergenic 45.0%
CACATCAAGTGCAGTGTTGT+AGG - chr5_4:66971731-66971750 None:intergenic 45.0%
CAACACTGCACTTGATGTGA+CGG + chr5_4:66971732-66971751 Msa0865780:intron 45.0%
CTGCATAAATTGCATGCAGC+AGG - chr5_4:66971814-66971833 None:intergenic 45.0%
AATGCTTGGAAAGCAGCATG+TGG + chr5_4:66971953-66971972 Msa0865780:CDS 45.0%
TGCATCTTGTATACCCCTCT+TGG - chr5_4:66972007-66972026 None:intergenic 45.0%
TGTGTACCAATCACTTGCGT+TGG + chr5_4:66972331-66972350 Msa0865780:intron 45.0%
GCTTGTAACTGGAGCAGTTA+TGG - chr5_4:66972801-66972820 None:intergenic 45.0%
GATTGTGTCTCATTGGGAGA+TGG + chr5_4:66972896-66972915 Msa0865780:CDS 45.0%
GGTCAATGATCACTGGGTTT+AGG - chr5_4:66973147-66973166 None:intergenic 45.0%
TTCAAAGACCAAGGATGGAG+TGG + chr5_4:66973349-66973368 Msa0865780:CDS 45.0%
GCAGTTGTGCATTTAGGAGT+CGG - chr5_4:66973494-66973513 None:intergenic 45.0%
TCTGCTGCAGTTGTGCATTT+AGG - chr5_4:66973500-66973519 None:intergenic 45.0%
CATGGAACGTCTCTTGCATG+TGG - chr5_4:66972236-66972255 None:intergenic 50.0%
CACATGCAAGAGACGTTCCA+TGG + chr5_4:66972234-66972253 Msa0865780:CDS 50.0%
CCAACACTAATTCCATGGCC+AGG - chr5_4:66972959-66972978 None:intergenic 50.0%
CCTGGCCATGGAATTAGTGT+TGG + chr5_4:66972956-66972975 Msa0865780:CDS 50.0%
ATGGTGTGAGGATCAAGACC+TGG + chr5_4:66973056-66973075 Msa0865780:CDS 50.0%
TCAGTAATCGGAGACGTTCC+CGG - chr5_4:66973091-66973110 None:intergenic 50.0%
GGCACTTCAAAGACCAAGGA+TGG + chr5_4:66973344-66973363 Msa0865780:CDS 50.0%
TGTGCATTTAGGAGTCGGTC+CGG - chr5_4:66973489-66973508 None:intergenic 50.0%
CATGGAACGTCTCTTGCATG+TGG - chr5_4:66972236-66972255 None:intergenic 50.0%
CACATGCAAGAGACGTTCCA+TGG + chr5_4:66972234-66972253 Msa0865780:CDS 50.0%
CCAACACTAATTCCATGGCC+AGG - chr5_4:66972959-66972978 None:intergenic 50.0%
CCTGGCCATGGAATTAGTGT+TGG + chr5_4:66972956-66972975 Msa0865780:CDS 50.0%
ATGGTGTGAGGATCAAGACC+TGG + chr5_4:66973056-66973075 Msa0865780:CDS 50.0%
TCAGTAATCGGAGACGTTCC+CGG - chr5_4:66973091-66973110 None:intergenic 50.0%
GGCACTTCAAAGACCAAGGA+TGG + chr5_4:66973344-66973363 Msa0865780:CDS 50.0%
TGTGCATTTAGGAGTCGGTC+CGG - chr5_4:66973489-66973508 None:intergenic 50.0%
CGAGGTCCAACGCAAGTGAT+TGG - chr5_4:66972340-66972359 None:intergenic 55.0%
GTGAATTGTGGACCTGGCCA+TGG + chr5_4:66972944-66972963 Msa0865780:CDS 55.0%
! CAAGACCTGGCCTAGTTCTC+CGG + chr5_4:66973069-66973088 Msa0865780:CDS 55.0%
! AAGACCTGGCCTAGTTCTCC+GGG + chr5_4:66973070-66973089 Msa0865780:CDS 55.0%
!! CAGGGGCACTTCAAAGACCA+AGG + chr5_4:66973340-66973359 Msa0865780:CDS 55.0%
GGAGTCGGTCCGGTAAGAAT+AGG - chr5_4:66973479-66973498 None:intergenic 55.0%
CGAGGTCCAACGCAAGTGAT+TGG - chr5_4:66972340-66972359 None:intergenic 55.0%
GTGAATTGTGGACCTGGCCA+TGG + chr5_4:66972944-66972963 Msa0865780:CDS 55.0%
! CAAGACCTGGCCTAGTTCTC+CGG + chr5_4:66973069-66973088 Msa0865780:CDS 55.0%
! AAGACCTGGCCTAGTTCTCC+GGG + chr5_4:66973070-66973089 Msa0865780:CDS 55.0%
!! CAGGGGCACTTCAAAGACCA+AGG + chr5_4:66973340-66973359 Msa0865780:CDS 55.0%
GGAGTCGGTCCGGTAAGAAT+AGG - chr5_4:66973479-66973498 None:intergenic 55.0%
GGAGACGTTCCCGGAGAACT+AGG - chr5_4:66973082-66973101 None:intergenic 60.0%
GGAGACGTTCCCGGAGAACT+AGG - chr5_4:66973082-66973101 None:intergenic 60.0%
CGTTCCCGGAGAACTAGGCC+AGG - chr5_4:66973077-66973096 None:intergenic 65.0%
CGTTCCCGGAGAACTAGGCC+AGG - chr5_4:66973077-66973096 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 66971540 66973526 66971540 ID=Msa0865780;Name=Msa0865780
chr5_4 mRNA 66971540 66973526 66971540 ID=Msa0865780-mRNA-1;Parent=Msa0865780;Name=Msa0865780-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|4|0|395
chr5_4 exon 66971540 66971665 66971540 ID=Msa0865780-mRNA-1:exon:21070;Parent=Msa0865780-mRNA-1
chr5_4 exon 66971944 66972255 66971944 ID=Msa0865780-mRNA-1:exon:21071;Parent=Msa0865780-mRNA-1
chr5_4 exon 66972683 66973201 66972683 ID=Msa0865780-mRNA-1:exon:21072;Parent=Msa0865780-mRNA-1
chr5_4 exon 66973296 66973526 66973296 ID=Msa0865780-mRNA-1:exon:21073;Parent=Msa0865780-mRNA-1
chr5_4 CDS 66971540 66971665 66971540 ID=Msa0865780-mRNA-1:cds;Parent=Msa0865780-mRNA-1
chr5_4 CDS 66971944 66972255 66971944 ID=Msa0865780-mRNA-1:cds;Parent=Msa0865780-mRNA-1
chr5_4 CDS 66972683 66973201 66972683 ID=Msa0865780-mRNA-1:cds;Parent=Msa0865780-mRNA-1
chr5_4 CDS 66973296 66973526 66973296 ID=Msa0865780-mRNA-1:cds;Parent=Msa0865780-mRNA-1
Gene Sequence

>Msa0865780

ATGGATAGGAAATTAAGTATTACAACAATTGTTTTATCCTTATTGTTTGCAACGCTTGGAATAGCTCAACCTAATATCTTTGATATAAAATCATTTGGAGGAGCCTCTCATGCAGATATAACAATGGCCTTTACAAATGCTTGGAAAGCAGCATGTGGATCAACAACTGCAAGCAAAGTTATGATTCCAAGAGGGGTATACAAGATGCATGCTGTAGATGTAAAAGGTCCTTGTAAGGCTCCTATTGAAGTTCAAGTTGATGGCACAATTCAAGCACCACAAAACCCTGATGAACTTAATGATGCTTATCAATGGATTAAATTTGGATATGTTGACTATTTTACTTTATCAGGTAAAGGTGTTTTTGATGGTAATGGTGAAACTGCTTGGAGACAAAATGATTGTGGAAAAAACTCCACATGCAAGAGACGTTCCATGAACTTTGGTTTTAATTTCCTAAAGCATTCAATTGTTCGAGACATAACTTCAAAAGACAGCAAAAACTTTCATGTCAATGTTTTGGGTTGCACCAACTTCACATTTGATAGTGTCACCATAACTGCTCCAGTTACAAGCATAAACACTGATGGAATACACATTGGAAGATCAACTGATGTGAAAGTTCTCAACACAAACATTGCTACTGGAGATGATTGTGTCTCATTGGGAGATGGAAGCAGACAAATAACTGTCCAAAATGTGAATTGTGGACCTGGCCATGGAATTAGTGTTGGAAGCTTAGGAAAGTATCCAAAAGAAGAAGCTGTTGAACACGTTCTAGTCAAGAATTGCACCATCACAAATACTGACAATGGTGTGAGGATCAAGACCTGGCCTAGTTCTCCGGGAACGTCTCCGATTACTGATATGCATTTTGAAGATATTATCATGGTTAATGTCCTAAACCCAGTGATCATTGACCAAGAGTATTGTCCTTGGAATCAATGCTCAAAACTGGTTCCATCAAAAATAAAGATTAGCAAAGTTATCTTCAAGAACATCAGGGGCACTTCAAAGACCAAGGATGGAGTGGTTCTTATATGTAGCAAGAGTTTTCCATGTGATGCTGTTGAGCTAAATAATGTTGCTCTTACATTTAATGGAGCTCCAGTAAACGCTAAATGTGTTAATGTCGAGCCTATTCTTACCGGACCGACTCCTAAATGCACAACTGCAGCAGAAGCTTAG
Protein sequence

>Msa0865780

MDRKLSITTIVLSLLFATLGIAQPNIFDIKSFGGASHADITMAFTNAWKAACGSTTASKVMIPRGVYKMHAVDVKGPCKAPIEVQVDGTIQAPQNPDELNDAYQWIKFGYVDYFTLSGKGVFDGNGETAWRQNDCGKNSTCKRRSMNFGFNFLKHSIVRDITSKDSKNFHVNVLGCTNFTFDSVTITAPVTSINTDGIHIGRSTDVKVLNTNIATGDDCVSLGDGSRQITVQNVNCGPGHGISVGSLGKYPKEEAVEHVLVKNCTITNTDNGVRIKTWPSSPGTSPITDMHFEDIIMVNVLNPVIIDQEYCPWNQCSKLVPSKIKISKVIFKNIRGTSKTKDGVVLICSKSFPCDAVELNNVALTFNGAPVNAKCVNVEPILTGPTPKCTTAAEA*