AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0745380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0745380 MtrunA17_Chr5g0448551 95.842 457 15 3 1 455 3 457 0.0 875
Msa0745380 MtrunA17_Chr7g0218811 31.935 429 270 10 1 420 11 426 5.63e-74 239
Msa0745380 MtrunA17_Chr7g0218821 30.137 438 277 8 1 420 1 427 2.73e-71 232
Msa0745380 MtrunA17_Chr7g0218831 30.000 440 282 11 4 432 5 429 4.32e-66 218
Msa0745380 MtrunA17_Chr7g0218841 29.932 441 282 12 4 432 5 430 1.50e-64 214
Msa0745380 MtrunA17_Chr7g0218791 31.121 437 275 12 1 422 1 426 8.22e-63 210
Msa0745380 MtrunA17_Chr3g0092641 30.612 441 270 14 4 415 11 444 5.33e-57 195
Msa0745380 MtrunA17_Chr8g0380531 30.140 428 268 12 6 415 11 425 2.82e-53 185
Msa0745380 MtrunA17_Chr6g0454401 28.315 445 285 14 2 415 7 448 4.14e-53 185
Msa0745380 MtrunA17_Chr3g0112761 31.849 449 259 18 6 428 9 436 4.81e-52 182
Msa0745380 MtrunA17_Chr3g0078841 27.447 470 293 13 3 443 8 458 2.64e-51 180
Msa0745380 MtrunA17_Chr6g0454191 27.703 444 289 12 2 415 7 448 2.66e-51 180
Msa0745380 MtrunA17_Chr8g0359821 28.345 441 287 11 2 415 7 445 5.37e-51 179
Msa0745380 MtrunA17_Chr6g0453951 27.912 455 289 14 2 421 54 504 1.91e-50 179
Msa0745380 MtrunA17_Chr6g0454211 27.703 444 288 11 2 415 294 734 2.48e-49 179
Msa0745380 MtrunA17_Chr6g0454211 26.460 291 154 10 115 380 3 258 1.50e-22 100
Msa0745380 MtrunA17_Chr6g0454321 27.716 451 290 12 2 423 7 450 2.77e-49 178
Msa0745380 MtrunA17_Chr5g0426431 28.702 439 277 15 6 415 13 444 3.01e-49 175
Msa0745380 MtrunA17_Chr3g0118701 26.577 444 291 11 2 415 12 450 5.69e-49 174
Msa0745380 MtrunA17_Chr6g0454181 26.386 451 298 12 2 423 7 452 7.04e-49 174
Msa0745380 MtrunA17_Chr6g0464921 28.409 440 273 12 4 429 10 421 8.57e-49 173
Msa0745380 MtrunA17_Chr3g0112771 29.861 432 272 12 6 421 13 429 9.76e-49 173
Msa0745380 MtrunA17_Chr6g0454261 26.637 443 294 10 2 415 7 447 1.21e-48 173
Msa0745380 MtrunA17_Chr6g0454341 26.726 449 297 11 2 423 7 450 1.88e-48 172
Msa0745380 MtrunA17_Chr6g0453961 27.928 444 286 12 3 415 17 457 2.70e-48 172
Msa0745380 MtrunA17_Chr3g0118671 26.818 440 285 10 7 415 8 441 3.32e-48 172
Msa0745380 MtrunA17_Chr6g0454301 27.765 443 287 11 2 415 260 698 1.14e-47 174
Msa0745380 MtrunA17_Chr6g0454301 32.143 196 120 4 230 415 5 197 2.87e-27 115
Msa0745380 MtrunA17_Chr2g0278711 26.316 437 284 13 2 407 8 437 2.35e-47 169
Msa0745380 MtrunA17_Chr6g0454131 27.111 450 293 13 3 423 8 451 3.23e-47 169
Msa0745380 MtrunA17_Chr8g0336331 25.835 449 300 10 2 423 7 449 5.68e-47 169
Msa0745380 MtrunA17_Chr6g0464881 29.291 437 260 15 4 415 10 422 7.23e-47 168
Msa0745380 MtrunA17_Chr3g0118711 26.923 442 283 12 2 410 10 444 1.20e-46 168
Msa0745380 MtrunA17_Chr3g0118691 25.799 438 293 10 2 410 12 446 2.09e-46 167
Msa0745380 MtrunA17_Chr6g0454141 26.549 452 293 13 2 418 7 454 2.51e-46 167
Msa0745380 MtrunA17_Chr6g0454331 26.906 446 289 12 3 415 5 446 2.64e-46 167
Msa0745380 MtrunA17_Chr4g0053501 28.051 467 298 13 6 455 12 457 7.00e-46 166
Msa0745380 MtrunA17_Chr5g0414321 29.808 416 253 13 6 407 12 402 1.86e-45 164
Msa0745380 MtrunA17_Chr7g0217881 27.842 431 269 12 2 406 7 421 2.25e-45 164
Msa0745380 MtrunA17_Chr6g0454361 28.315 445 282 13 3 415 9 448 2.45e-45 164
Msa0745380 MtrunA17_Chr5g0414331 29.398 415 256 12 6 407 14 404 3.12e-45 164
Msa0745380 MtrunA17_Chr6g0454121 26.457 446 288 12 3 415 8 446 1.21e-44 162
Msa0745380 MtrunA17_Chr4g0053321 27.828 442 280 13 6 420 27 456 1.66e-44 162
Msa0745380 MtrunA17_Chr6g0454291 26.923 442 292 11 3 415 5 444 2.23e-44 161
Msa0745380 MtrunA17_Chr3g0118661 25.747 435 287 11 2 406 10 438 2.26e-44 162
Msa0745380 MtrunA17_Chr3g0118771 24.116 481 325 14 2 448 18 492 2.30e-44 162
Msa0745380 MtrunA17_Chr6g0454201 26.327 452 295 13 3 423 9 453 1.14e-43 160
Msa0745380 MtrunA17_Chr7g0249931 28.205 468 280 18 9 446 44 485 2.31e-43 159
Msa0745380 MtrunA17_Chr4g0044511 30.655 473 261 23 6 430 41 494 6.31e-43 158
Msa0745380 MtrunA17_Chr3g0098111 26.637 443 272 16 6 414 10 433 2.33e-42 156
Msa0745380 MtrunA17_Chr5g0412111 25.597 461 306 9 1 432 1 453 2.94e-42 155
Msa0745380 MtrunA17_Chr6g0464841 29.500 400 245 13 7 389 13 392 5.45e-42 154
Msa0745380 MtrunA17_Chr8g0377921 29.306 447 260 17 6 424 5 423 6.92e-42 154
Msa0745380 MtrunA17_Chr4g0050341 25.503 447 294 11 3 415 17 458 8.36e-42 155
Msa0745380 MtrunA17_Chr1g0207861 28.941 425 241 17 6 394 9 408 1.10e-41 154
Msa0745380 MtrunA17_Chr6g0452771 26.211 454 295 15 2 423 7 452 1.64e-41 154
Msa0745380 MtrunA17_Chr4g0032331 28.736 435 252 18 6 410 9 415 2.12e-41 153
Msa0745380 MtrunA17_Chr6g0454151 25.393 445 295 12 2 415 7 445 2.37e-41 153
Msa0745380 MtrunA17_Chr5g0412131 26.667 420 284 10 4 403 11 426 2.53e-41 153
Msa0745380 MtrunA17_Chr6g0464871 29.040 396 252 9 7 389 25 404 2.68e-41 153
Msa0745380 MtrunA17_Chr6g0464861 28.676 408 243 13 4 389 10 391 4.04e-41 152
Msa0745380 MtrunA17_Chr6g0454351 25.771 454 283 15 2 421 9 442 4.97e-40 149
Msa0745380 MtrunA17_Chr7g0249981 27.941 408 257 13 1 389 15 404 1.14e-39 149
Msa0745380 MtrunA17_Chr5g0423981 26.106 452 288 14 3 435 8 432 2.41e-39 147
Msa0745380 MtrunA17_Chr6g0454251 27.778 396 251 12 2 366 4 395 4.93e-39 145
Msa0745380 MtrunA17_Chr8g0366391 29.899 495 265 22 5 444 10 477 2.10e-38 145
Msa0745380 MtrunA17_Chr1g0207981 26.512 430 276 12 6 406 14 432 4.22e-38 144
Msa0745380 MtrunA17_Chr5g0431441 26.415 424 284 11 6 418 19 425 1.11e-37 143
Msa0745380 MtrunA17_Chr5g0429711 27.882 373 242 11 74 429 87 449 3.82e-37 141
Msa0745380 MtrunA17_Chr8g0377941 27.169 438 275 15 6 415 8 429 5.38e-37 141
Msa0745380 MtrunA17_Chr5g0412101 25.000 420 292 9 4 403 11 427 6.14e-37 141
Msa0745380 MtrunA17_Chr8g0365811 26.402 428 265 17 2 397 491 900 8.71e-37 144
Msa0745380 MtrunA17_Chr8g0365811 26.450 431 256 17 6 397 10 418 1.89e-36 143
Msa0745380 MtrunA17_Chr8g0373301 32.081 346 189 12 104 422 112 438 1.00e-36 140
Msa0745380 MtrunA17_Chr5g0401721 26.846 447 283 15 6 418 9 445 1.19e-36 140
Msa0745380 MtrunA17_Chr8g0339601 37.075 294 139 14 161 422 23 302 1.44e-36 137
Msa0745380 MtrunA17_Chr4g0044501 28.604 444 263 16 6 410 11 439 2.04e-36 140
Msa0745380 MtrunA17_Chr3g0118751 22.689 476 309 15 2 448 3 448 2.49e-36 139
Msa0745380 MtrunA17_Chr7g0243681 27.094 406 261 13 6 388 12 405 2.90e-36 139
Msa0745380 MtrunA17_Chr4g0044481 31.527 406 219 18 6 388 28 397 4.76e-36 137
Msa0745380 MtrunA17_Chr5g0442541 26.824 466 273 14 1 421 1 443 7.59e-36 138
Msa0745380 MtrunA17_Chr1g0161351 26.824 425 250 17 6 394 38 437 1.11e-35 138
Msa0745380 MtrunA17_Chr1g0207971 25.173 433 284 13 6 418 9 421 1.27e-35 137
Msa0745380 MtrunA17_Chr1g0207951 27.316 421 252 15 6 397 657 1052 2.52e-35 139
Msa0745380 MtrunA17_Chr1g0207951 25.785 446 276 15 6 423 125 543 1.75e-34 137
Msa0745380 MtrunA17_Chr8g0339461 32.865 356 180 15 104 422 110 443 8.00e-35 135
Msa0745380 MtrunA17_Chr8g0336741 31.755 359 198 13 107 435 119 460 9.52e-35 135
Msa0745380 MtrunA17_Chr7g0275511 28.635 447 267 15 4 415 14 443 1.46e-34 134
Msa0745380 MtrunA17_Chr6g0463851 28.059 474 254 22 8 421 14 460 1.79e-34 134
Msa0745380 MtrunA17_Chr6g0462521 31.858 339 174 14 107 424 113 415 2.55e-34 133
Msa0745380 MtrunA17_Chr7g0265141 30.476 420 238 16 7 390 11 412 2.91e-34 134
Msa0745380 MtrunA17_Chr6g0462531 28.132 455 267 17 3 424 2 429 3.16e-34 133
Msa0745380 MtrunA17_Chr7g0250001 26.463 393 258 11 11 390 12 386 3.32e-34 133
Msa0745380 MtrunA17_Chr5g0426401 30.435 276 172 6 162 420 14 286 3.33e-34 130
Msa0745380 MtrunA17_Chr8g0339451 31.675 382 201 17 78 422 77 435 3.86e-34 133
Msa0745380 MtrunA17_Chr4g0066261 29.087 471 267 19 1 421 6 459 4.40e-34 133
Msa0745380 MtrunA17_Chr7g0232401 29.970 337 203 12 107 422 115 439 4.89e-34 133
Msa0745380 MtrunA17_Chr4g0060511 28.910 422 242 18 6 388 12 414 4.90e-34 133
Msa0745380 MtrunA17_Chr7g0243861 28.571 413 252 16 6 388 15 414 6.33e-34 133
Msa0745380 MtrunA17_Chr7g0275681 27.198 489 291 19 4 443 11 483 1.43e-33 132
Msa0745380 MtrunA17_Chr7g0243771 27.427 412 254 16 6 388 7 402 1.69e-33 132
Msa0745380 MtrunA17_Chr7g0243631 27.751 418 252 17 6 390 14 414 3.53e-33 131
Msa0745380 MtrunA17_Chr7g0243801 27.494 411 255 15 6 388 8 403 3.56e-33 130
Msa0745380 MtrunA17_Chr8g0339631 33.621 348 185 15 104 422 110 440 3.67e-33 130
Msa0745380 MtrunA17_Chr6g0462551 28.969 359 207 12 90 426 99 431 5.88e-33 130
Msa0745380 MtrunA17_Chr6g0462571 29.178 353 209 10 90 424 97 426 5.90e-33 130
Msa0745380 MtrunA17_Chr4g0066221 26.483 472 262 17 8 421 14 458 7.92e-33 130
Msa0745380 MtrunA17_Chr8g0361371 25.714 455 276 14 2 421 4 431 1.08e-32 129
Msa0745380 MtrunA17_Chr2g0294921 26.170 470 276 16 1 420 155 603 1.33e-32 130
Msa0745380 MtrunA17_Chr6g0462541 31.176 340 183 14 107 424 118 428 1.69e-32 129
Msa0745380 MtrunA17_Chr8g0374941 27.922 462 251 18 9 414 15 450 1.71e-32 131
Msa0745380 MtrunA17_Chr8g0374941 27.293 458 259 17 9 414 480 915 1.23e-29 122
Msa0745380 MtrunA17_Chr8g0374941 27.273 462 254 19 9 414 953 1388 5.45e-29 120
Msa0745380 MtrunA17_Chr8g0336731 31.548 336 188 11 107 415 138 458 2.04e-32 129
Msa0745380 MtrunA17_Chr7g0265041 26.482 506 292 22 4 449 10 495 2.61e-32 128
Msa0745380 MtrunA17_Chr5g0419761 27.527 465 267 19 7 427 11 449 2.86e-32 128
Msa0745380 MtrunA17_Chr1g0153451 31.118 331 186 11 107 410 112 427 3.37e-32 127
Msa0745380 MtrunA17_Chr7g0243951 27.578 417 250 17 6 388 12 410 3.38e-32 128
Msa0745380 MtrunA17_Chr7g0232331 37.209 215 106 7 231 425 235 440 4.50e-32 127
Msa0745380 MtrunA17_Chr5g0442491 26.353 425 260 14 1 390 1 407 6.34e-32 127
Msa0745380 MtrunA17_Chr3g0118721 27.273 297 193 9 174 453 4 294 6.64e-32 123
Msa0745380 MtrunA17_Chr7g0243931 27.751 418 249 17 6 388 18 417 1.03e-31 127
Msa0745380 MtrunA17_Chr8g0336651 31.138 334 187 10 107 412 112 430 1.16e-31 129
Msa0745380 MtrunA17_Chr8g0336651 37.963 216 101 9 225 415 1004 1211 2.27e-26 112
Msa0745380 MtrunA17_Chr8g0336651 32.083 240 126 7 184 410 523 738 1.63e-24 107
Msa0745380 MtrunA17_Chr5g0442601 26.327 471 280 17 1 421 400 853 1.36e-31 128
Msa0745380 MtrunA17_Chr5g0442601 27.164 335 190 10 77 386 31 336 5.40e-22 99.4
Msa0745380 MtrunA17_Chr6g0486251 32.922 243 129 7 193 410 195 428 1.71e-31 125
Msa0745380 MtrunA17_Chr6g0486201 32.922 243 129 7 193 410 195 428 1.71e-31 125
Msa0745380 MtrunA17_Chr4g0014061 27.529 425 246 18 3 392 6 403 2.22e-31 125
Msa0745380 MtrunA17_Chr7g0265151 26.087 460 279 17 2 414 4 449 2.28e-31 125
Msa0745380 MtrunA17_Chr5g0429681 27.401 354 215 12 80 411 136 469 2.76e-31 125
Msa0745380 MtrunA17_Chr4g0044521 27.594 453 271 17 6 420 10 443 3.29e-31 125
Msa0745380 MtrunA17_Chr7g0232391 33.208 265 137 9 200 433 196 451 3.70e-31 125
Msa0745380 MtrunA17_Chr8g0347281 25.223 448 268 15 4 416 17 432 4.24e-31 124
Msa0745380 MtrunA17_Chr6g0454271 31.020 245 149 9 177 406 7 246 4.41e-31 121
Msa0745380 MtrunA17_Chr5g0393591 23.690 477 287 17 6 454 18 445 4.50e-31 124
Msa0745380 MtrunA17_Chr8g0374931 27.140 479 294 18 1 446 6 462 4.91e-31 124
Msa0745380 MtrunA17_Chr1g0207831 25.917 409 261 12 6 390 9 399 5.43e-31 124
Msa0745380 MtrunA17_Chr1g0207931 39.130 184 88 6 222 390 260 434 6.15e-31 124
Msa0745380 MtrunA17_Chr7g0265051 27.178 482 264 21 2 420 4 461 6.46e-31 124
Msa0745380 MtrunA17_Chr8g0339441 39.683 189 88 6 256 422 217 401 7.17e-31 123
Msa0745380 MtrunA17_Chr5g0442561 27.163 416 268 9 1 391 1 406 7.87e-31 124
Msa0745380 MtrunA17_Chr8g0334831 25.270 463 276 14 2 421 3 438 8.51e-31 124
Msa0745380 MtrunA17_Chr6g0454221 33.333 198 118 4 229 415 4 198 1.12e-30 120
Msa0745380 MtrunA17_Chr5g0419771 27.212 452 269 17 6 410 37 475 1.21e-30 124
Msa0745380 MtrunA17_Chr8g0382021 36.634 202 105 6 232 420 261 452 1.51e-30 123
Msa0745380 MtrunA17_Chr7g0265101 26.653 484 266 23 2 420 4 463 1.58e-30 123
Msa0745380 MtrunA17_Chr7g0243781 27.252 444 259 21 6 407 10 431 2.01e-30 123
Msa0745380 MtrunA17_Chr5g0431371 25.057 439 285 12 6 423 11 426 2.97e-30 122
Msa0745380 MtrunA17_Chr5g0431401 23.853 436 286 12 6 418 11 423 3.12e-30 122
Msa0745380 MtrunA17_Chr8g0374901 26.797 459 260 17 8 414 15 449 4.28e-30 122
Msa0745380 MtrunA17_Chr2g0294931 27.489 462 268 17 6 429 12 444 4.62e-30 122
Msa0745380 MtrunA17_Chr7g0249961 38.922 167 87 4 232 389 37 197 5.63e-30 117
Msa0745380 MtrunA17_Chr5g0428081 27.253 455 247 17 8 407 14 439 5.94e-30 121
Msa0745380 MtrunA17_Chr8g0336691 30.383 339 190 10 107 415 1025 1347 5.99e-30 124
Msa0745380 MtrunA17_Chr8g0336691 30.120 332 191 10 107 410 119 437 7.37e-29 120
Msa0745380 MtrunA17_Chr8g0336691 39.062 192 92 8 230 415 708 880 5.53e-24 105
Msa0745380 MtrunA17_Chr5g0442581 25.708 424 266 13 1 390 1 409 6.11e-30 122
Msa0745380 MtrunA17_Chr4g0011051 26.360 478 272 20 4 420 6 464 6.17e-30 121
Msa0745380 MtrunA17_Chr5g0416741 26.018 442 288 12 6 420 14 443 7.55e-30 121
Msa0745380 MtrunA17_Chr8g0350881 26.496 468 267 18 1 414 7 451 7.64e-30 121
Msa0745380 MtrunA17_Chr5g0431421 24.194 434 287 11 6 418 11 423 9.63e-30 120
Msa0745380 MtrunA17_Chr4g0066151 25.855 468 267 18 6 424 19 455 1.07e-29 120
Msa0745380 MtrunA17_Chr4g0066131 26.328 433 249 15 6 397 14 417 1.20e-29 120
Msa0745380 MtrunA17_Chr4g0066171 27.195 467 259 21 1 429 16 439 1.37e-29 120
Msa0745380 MtrunA17_Chr7g0232341 33.977 259 132 9 193 420 192 442 1.38e-29 120
Msa0745380 MtrunA17_Chr1g0173121 37.755 196 96 7 256 428 256 448 2.29e-29 119
Msa0745380 MtrunA17_Chr8g0335161 25.056 443 285 15 2 416 3 426 2.55e-29 119
Msa0745380 MtrunA17_Chr8g0374971 25.330 454 278 15 1 410 7 443 2.88e-29 119
Msa0745380 MtrunA17_Chr5g0448521 24.583 480 286 18 1 429 1 455 3.10e-29 119
Msa0745380 MtrunA17_Chr6g0449931 27.225 382 225 12 78 427 84 444 4.31e-29 119
Msa0745380 MtrunA17_Chr4g0072761 32.680 306 174 13 142 432 146 434 4.36e-29 119
Msa0745380 MtrunA17_Chr5g0442521 26.804 485 283 19 1 432 1 466 6.34e-29 118
Msa0745380 MtrunA17_Chr3g0122001 26.049 453 273 18 7 424 8 433 1.25e-28 119
Msa0745380 MtrunA17_Chr3g0122001 25.664 452 275 19 7 424 488 912 2.43e-27 115
Msa0745380 MtrunA17_Chr7g0218311 26.667 465 269 17 1 415 11 453 2.32e-28 117
Msa0745380 MtrunA17_Chr6g0459311 35.961 203 103 6 229 416 241 431 3.71e-28 116
Msa0745380 MtrunA17_Chr6g0463891 25.806 434 264 12 6 398 13 429 4.31e-28 116
Msa0745380 MtrunA17_Chr1g0159551 37.714 175 87 5 255 410 252 423 6.04e-28 115
Msa0745380 MtrunA17_Chr7g0232411 33.198 247 125 9 200 415 196 433 6.66e-28 115
Msa0745380 MtrunA17_Chr8g0355011 25.938 320 193 7 104 415 46 329 6.80e-28 114
Msa0745380 MtrunA17_Chr2g0329111 26.619 417 252 17 2 382 4 402 8.04e-28 115
Msa0745380 MtrunA17_Chr4g0072771 25.679 405 260 13 6 391 26 408 9.31e-28 115
Msa0745380 MtrunA17_Chr1g0179901 26.813 455 268 19 6 410 17 456 1.50e-27 115
Msa0745380 MtrunA17_Chr8g0334861 35.443 237 116 10 221 429 225 452 1.82e-27 114
Msa0745380 MtrunA17_Chr8g0347271 23.043 447 279 13 4 416 18 433 2.89e-27 114
Msa0745380 MtrunA17_Chr3g0121991 25.635 433 272 15 7 407 81 495 3.07e-27 114
Msa0745380 MtrunA17_Chr7g0235051 27.078 421 230 18 6 396 12 385 3.55e-27 113
Msa0745380 MtrunA17_Chr5g0431361 22.126 461 319 12 6 445 13 454 4.97e-27 112
Msa0745380 MtrunA17_Chr3g0106231 23.890 473 304 16 6 453 19 460 8.83e-27 112
Msa0745380 MtrunA17_Chr5g0416821 26.237 465 264 19 6 420 15 450 9.83e-27 112
Msa0745380 MtrunA17_Chr7g0243871 24.757 412 263 16 6 390 10 401 1.38e-26 112
Msa0745380 MtrunA17_Chr4g0066201 28.671 429 233 20 1 392 13 405 1.40e-26 112
Msa0745380 MtrunA17_Chr7g0243761 23.853 436 286 16 6 410 12 432 3.27e-26 110
Msa0745380 MtrunA17_Chr8g0334851 27.838 370 207 16 88 418 96 444 3.32e-26 110
Msa0745380 MtrunA17_Chr2g0294941 30.097 309 177 12 107 392 18 310 3.90e-26 109
Msa0745380 MtrunA17_Chr4g0066281 26.464 461 252 21 8 428 15 428 5.00e-26 110
Msa0745380 MtrunA17_Chr7g0265111 28.501 407 236 18 7 376 41 429 5.39e-26 110
Msa0745380 MtrunA17_Chr5g0409591 25.000 472 263 17 6 411 5 451 6.48e-26 110
Msa0745380 MtrunA17_Chr6g0463861 25.602 457 269 19 8 428 14 435 6.50e-26 110
Msa0745380 MtrunA17_Chr7g0232311 30.108 279 153 9 168 422 169 429 6.92e-26 109
Msa0745380 MtrunA17_Chr5g0442511 25.786 477 266 19 1 429 45 481 1.04e-25 109
Msa0745380 MtrunA17_Chr1g0196851 24.885 434 274 15 6 410 50 460 3.48e-25 107
Msa0745380 MtrunA17_Chr5g0410941 26.144 459 282 17 6 424 24 465 4.79e-25 107
Msa0745380 MtrunA17_Chr6g0454171 31.980 197 105 5 229 415 100 277 6.64e-25 104
Msa0745380 MtrunA17_Chr1g0153461 37.079 178 89 5 254 410 1 176 7.97e-25 102
Msa0745380 MtrunA17_Chr8g0335141 34.826 201 103 7 232 416 240 428 9.41e-25 106
Msa0745380 MtrunA17_Chr4g0029131 26.802 444 262 20 6 415 13 427 1.10e-24 107
Msa0745380 MtrunA17_Chr1g0165701 25.056 447 278 15 7 418 17 441 1.70e-24 105
Msa0745380 MtrunA17_Chr8g0355221 23.265 490 304 20 7 444 17 486 2.99e-24 105
Msa0745380 MtrunA17_Chr5g0440421 32.877 219 112 8 256 446 284 495 4.07e-24 104
Msa0745380 MtrunA17_Chr7g0243851 24.505 404 238 13 6 388 12 369 9.21e-24 103
Msa0745380 MtrunA17_Chr5g0401851 23.956 455 282 16 7 420 12 443 9.29e-24 103
Msa0745380 MtrunA17_Chr7g0232351 35.437 206 97 8 178 359 179 372 9.65e-24 102
Msa0745380 MtrunA17_Chr4g0029151 25.397 441 272 18 6 415 21 435 3.53e-23 101
Msa0745380 MtrunA17_Chr2g0302991 26.882 372 216 16 109 446 115 464 5.22e-23 101
Msa0745380 MtrunA17_Chr2g0302961 24.502 502 288 26 1 446 1 467 7.24e-23 100
Msa0745380 MtrunA17_Chr8g0361411 26.303 422 250 17 10 400 13 404 1.65e-22 99.8
Msa0745380 MtrunA17_Chr8g0369341 26.376 436 243 18 2 390 5 409 2.44e-22 99.4
Msa0745380 MtrunA17_Chr8g0367221 27.818 417 239 20 6 387 13 402 2.85e-22 100
Msa0745380 MtrunA17_Chr8g0367221 36.905 168 93 5 222 382 1514 1675 1.19e-21 98.6
Msa0745380 MtrunA17_Chr8g0367221 34.804 204 109 8 222 410 1024 1218 3.31e-20 94.4
Msa0745380 MtrunA17_Chr7g0241781 26.154 455 256 20 2 427 6 409 2.86e-22 99.0
Msa0745380 MtrunA17_Chr8g0357361 38.095 147 80 6 256 398 117 256 2.99e-22 95.9
Msa0745380 MtrunA17_Chr7g0243611 28.283 297 168 13 111 388 1 271 1.37e-21 94.7
Msa0745380 MtrunA17_Chr7g0243811 27.098 417 231 20 17 393 1 384 2.80e-21 95.5
Msa0745380 MtrunA17_Chr4g0040711 38.068 176 94 7 259 422 261 433 3.61e-21 95.9
Msa0745380 MtrunA17_Chr8g0336261 33.077 130 82 2 285 412 6 132 4.86e-21 89.0
Msa0745380 MtrunA17_Chr3g0079731 25.705 319 180 9 108 388 117 416 5.91e-21 95.1
Msa0745380 MtrunA17_Chr7g0243911 37.063 143 82 4 252 388 17 157 9.74e-21 90.5
Msa0745380 MtrunA17_Chr5g0403641 31.641 256 121 11 198 410 222 466 1.42e-20 94.4
Msa0745380 MtrunA17_Chr2g0283041 34.314 204 113 8 257 447 256 451 1.60e-20 94.0
Msa0745380 MtrunA17_Chr8g0336251 34.171 199 119 7 255 444 267 462 2.13e-20 93.6
Msa0745380 MtrunA17_Chr8g0370941 33.537 164 79 3 255 389 260 422 2.38e-20 93.6
Msa0745380 MtrunA17_Chr8g0336321 34.171 199 119 7 255 444 267 462 3.63e-20 92.8
Msa0745380 MtrunA17_Chr5g0420801 26.050 357 224 13 107 449 116 446 4.45e-20 92.4
Msa0745380 MtrunA17_Chr2g0278721 34.872 195 111 8 226 410 753 941 9.69e-20 92.4
Msa0745380 MtrunA17_Chr2g0278721 35.156 128 75 5 259 382 274 397 4.62e-14 74.7
Msa0745380 MtrunA17_Chr7g0243711 37.226 137 80 3 257 388 108 243 1.21e-19 89.7
Msa0745380 MtrunA17_Chr7g0241801 26.879 439 240 23 2 410 6 393 1.54e-19 90.5
Msa0745380 MtrunA17_Chr5g0432731 26.087 276 171 8 162 427 6 258 6.54e-19 87.0
Msa0745380 MtrunA17_Chr4g0040691 33.333 207 113 8 222 414 229 424 6.80e-19 89.0
Msa0745380 MtrunA17_Chr2g0307961 34.177 158 92 4 259 415 280 426 1.92e-18 87.4
Msa0745380 MtrunA17_Chr6g0454371 31.034 145 87 4 285 423 6 143 3.59e-18 82.0
Msa0745380 MtrunA17_Chr7g0231631 29.469 207 121 5 224 420 28 219 6.47e-18 83.6
Msa0745380 MtrunA17_Chr5g0427571 38.346 133 75 4 255 382 101 231 1.07e-17 83.6
Msa0745380 MtrunA17_Chr7g0250021 27.160 324 207 12 9 318 16 324 1.63e-17 83.6
Msa0745380 MtrunA17_Chr1g0207881 45.333 75 41 0 316 390 247 321 2.13e-17 84.0
Msa0745380 MtrunA17_Chr4g0066141 42.593 108 51 3 311 407 200 307 5.61e-17 82.0
Msa0745380 MtrunA17_Chr4g0042931 32.386 176 95 6 258 420 263 427 6.76e-17 82.8
Msa0745380 MtrunA17_Chr2g0319761 26.959 434 264 18 6 409 9 419 9.55e-17 82.4
Msa0745380 MtrunA17_Chr3g0106251 27.155 232 155 5 162 390 8 228 1.79e-16 80.1
Msa0745380 MtrunA17_Chr4g0042891 36.306 157 84 6 257 401 265 417 2.46e-16 81.3
Msa0745380 MtrunA17_Chr3g0092031 38.655 119 65 5 259 373 6 120 2.58e-16 77.4
Msa0745380 MtrunA17_Chr6g0454231 27.604 192 93 6 229 414 30 181 2.69e-16 80.9
Msa0745380 MtrunA17_Chr2g0319791 34.146 205 105 9 222 410 229 419 8.15e-16 79.3
Msa0745380 MtrunA17_Chr6g0464091 31.892 185 103 8 254 432 274 441 8.45e-16 79.3
Msa0745380 MtrunA17_Chr2g0302851 33.750 160 91 7 222 373 232 384 1.30e-15 79.0
Msa0745380 MtrunA17_Chr5g0431431 22.251 382 225 12 6 383 11 324 1.64e-15 77.8
Msa0745380 MtrunA17_Chr4g0039881 38.136 118 67 4 259 373 246 360 2.31e-15 77.8
Msa0745380 MtrunA17_Chr2g0319751 39.869 153 78 6 257 402 734 879 2.50e-15 78.6
Msa0745380 MtrunA17_Chr2g0319751 32.000 175 88 7 257 422 257 409 1.91e-13 72.8
Msa0745380 MtrunA17_Chr3g0079711 32.105 190 94 9 283 442 2 186 2.80e-15 74.3
Msa0745380 MtrunA17_Chr6g0466841 30.508 177 107 8 222 390 234 402 6.85e-15 76.6
Msa0745380 MtrunA17_Chr6g0466831 30.508 177 107 8 222 390 234 402 1.21e-14 75.9
Msa0745380 MtrunA17_Chr4g0069611 32.919 161 95 6 259 410 269 425 2.29e-14 75.1
Msa0745380 MtrunA17_Chr8g0337381 35.821 134 76 5 326 450 2 134 4.85e-14 68.9
Msa0745380 MtrunA17_Chr2g0278741 35.156 128 75 5 259 382 356 479 6.19e-14 73.9
Msa0745380 MtrunA17_Chr2g0319731 32.597 181 105 7 259 425 276 453 6.24e-14 73.6
Msa0745380 MtrunA17_Chr6g0453981 26.829 205 134 7 114 304 2 204 8.50e-14 70.9
Msa0745380 MtrunA17_Chr2g0321331 34.545 165 85 8 266 422 93 242 3.25e-13 69.7
Msa0745380 MtrunA17_Chr6g0482061 27.444 266 167 10 163 408 181 440 5.61e-13 70.9
Msa0745380 MtrunA17_Chr5g0442501 26.994 326 205 15 1 310 1 309 1.88e-12 68.2
Msa0745380 MtrunA17_Chr2g0319801 31.492 181 107 7 259 425 259 436 8.99e-12 67.0
Msa0745380 MtrunA17_Chr5g0426411 26.667 165 110 5 3 157 10 173 3.33e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0745380 AT3G22250.1 53.047 443 183 8 2 424 5 442 4.89e-166 476
Msa0745380 AT3G02100.1 32.976 467 267 17 1 449 9 447 1.26e-65 218
Msa0745380 AT1G22400.1 28.764 445 280 14 2 415 10 448 1.79e-57 197
Msa0745380 AT3G11340.1 29.176 449 280 14 3 432 7 436 4.40e-55 190
Msa0745380 AT1G22340.1 27.386 482 311 15 2 449 10 486 1.02e-53 187
Msa0745380 AT1G22360.1 27.922 462 299 13 2 433 7 464 7.58e-53 185
Msa0745380 AT5G59590.1 28.833 437 282 12 1 422 6 428 1.79e-52 183
Msa0745380 AT1G22380.1 28.118 441 287 10 2 415 10 447 3.02e-52 183
Msa0745380 AT1G22370.2 27.273 418 269 12 2 392 10 419 2.49e-51 181
Msa0745380 AT5G05870.1 29.890 455 274 16 6 432 9 446 5.28e-51 179
Msa0745380 AT2G31790.1 28.972 428 267 9 2 407 5 417 3.34e-50 177
Msa0745380 AT1G22360.2 28.878 419 266 12 2 392 7 421 3.76e-50 177
Msa0745380 AT5G59580.1 28.913 460 298 13 3 448 7 451 1.81e-49 175
Msa0745380 AT2G23250.1 28.750 400 259 14 14 407 7 386 1.03e-46 167
Msa0745380 AT2G43820.1 30.118 425 247 15 2 407 4 397 5.14e-46 166
Msa0745380 AT3G46670.1 27.640 445 283 15 6 429 10 436 1.02e-45 165
Msa0745380 AT1G78270.1 26.351 444 291 14 2 415 10 447 1.31e-44 162
Msa0745380 AT1G05675.1 29.176 425 257 14 6 407 7 410 2.62e-44 161
Msa0745380 AT2G43840.2 27.506 429 255 14 6 407 8 407 2.84e-44 161
Msa0745380 AT1G05680.1 27.660 423 275 11 6 410 7 416 3.38e-44 161
Msa0745380 AT3G55700.1 29.284 461 263 18 6 431 9 441 3.73e-44 161
Msa0745380 AT2G36970.1 28.297 417 259 14 2 390 7 411 8.72e-44 160
Msa0745380 AT4G14090.1 26.180 466 299 14 2 443 10 454 1.13e-43 159
Msa0745380 AT2G43840.1 27.273 429 256 14 6 407 8 407 1.96e-43 159
Msa0745380 AT2G28080.1 26.606 436 286 13 9 418 22 449 2.64e-43 159
Msa0745380 AT2G31750.2 28.306 484 294 20 2 455 6 466 4.21e-43 159
Msa0745380 AT2G31750.1 29.103 457 275 18 2 429 6 442 4.59e-43 158
Msa0745380 AT2G26480.1 27.195 467 302 15 1 447 4 452 1.06e-42 157
Msa0745380 AT3G46660.1 27.002 437 282 14 6 422 15 434 1.58e-42 156
Msa0745380 AT3G46700.1 26.623 462 305 16 1 447 5 447 5.20e-42 155
Msa0745380 AT2G23260.1 27.628 409 267 13 6 400 11 404 1.27e-41 154
Msa0745380 AT3G55710.1 29.571 443 263 14 3 418 7 427 1.37e-41 154
Msa0745380 AT4G15490.1 25.052 479 308 17 6 449 9 471 2.05e-39 148
Msa0745380 AT3G46680.1 26.852 432 296 10 2 422 6 428 6.96e-39 146
Msa0745380 AT1G24100.1 27.536 414 240 13 6 389 12 395 9.78e-39 146
Msa0745380 AT5G05880.1 25.446 448 297 14 6 432 9 440 2.31e-38 145
Msa0745380 AT3G46720.1 26.047 430 293 11 2 422 6 419 4.13e-38 144
Msa0745380 AT5G05900.1 27.009 448 289 14 6 432 9 439 4.17e-38 144
Msa0745380 AT5G05860.1 25.346 434 290 12 6 422 10 426 7.39e-38 143
Msa0745380 AT2G15490.3 27.635 427 245 14 6 390 8 412 7.95e-37 141
Msa0745380 AT2G15480.2 28.169 426 244 15 6 390 11 415 1.05e-36 141
Msa0745380 AT1G05530.1 27.578 446 268 15 1 414 1 423 1.05e-36 140
Msa0745380 AT2G15480.1 29.176 425 241 16 6 390 11 415 1.32e-36 140
Msa0745380 AT3G21560.1 25.508 443 274 16 4 415 11 428 2.68e-36 140
Msa0745380 AT4G15550.1 26.712 438 268 16 4 411 12 426 4.54e-36 139
Msa0745380 AT5G38040.1 26.882 465 274 19 13 444 18 449 5.15e-36 138
Msa0745380 AT1G05560.1 24.689 482 310 15 1 452 1 459 7.77e-36 138
Msa0745380 AT4G34135.1 29.412 425 246 19 2 390 8 414 8.61e-36 138
Msa0745380 AT3G46690.1 26.420 405 266 12 1 390 5 392 9.42e-36 137
Msa0745380 AT1G05560.2 24.843 479 307 15 1 449 51 506 1.22e-35 138
Msa0745380 AT4G34131.1 27.103 428 257 14 2 392 7 416 1.73e-35 137
Msa0745380 AT4G15480.1 26.437 435 277 15 6 416 20 435 2.21e-35 137
Msa0745380 AT2G15490.1 27.209 430 246 14 6 390 8 415 3.26e-35 137
Msa0745380 AT3G46650.1 27.354 446 269 16 3 428 8 418 9.84e-35 134
Msa0745380 AT1G22370.1 30.364 247 151 7 162 392 8 249 2.59e-34 130
Msa0745380 AT2G36800.1 31.517 422 229 22 7 389 14 414 4.94e-34 134
Msa0745380 AT5G38010.1 28.319 452 259 16 6 422 11 432 5.30e-34 133
Msa0745380 AT4G01070.1 26.866 469 291 15 2 432 5 459 8.19e-34 133
Msa0745380 AT3G21760.1 26.625 477 284 16 6 429 5 468 8.38e-34 133
Msa0745380 AT2G30140.1 26.364 440 274 13 6 420 14 428 8.59e-34 132
Msa0745380 AT2G36770.1 27.291 502 284 24 7 448 16 496 1.46e-33 132
Msa0745380 AT3G21790.1 25.249 503 305 18 6 455 5 489 1.48e-33 132
Msa0745380 AT3G53160.1 29.148 446 248 21 7 413 10 426 2.89e-33 131
Msa0745380 AT4G15500.1 25.170 441 290 16 4 420 8 432 3.05e-33 131
Msa0745380 AT2G30140.2 26.196 439 275 13 6 420 14 427 6.88e-33 130
Msa0745380 AT1G01390.1 27.893 484 276 18 4 438 7 466 7.51e-32 127
Msa0745380 AT5G17050.1 27.208 419 272 17 6 406 13 416 8.84e-32 127
Msa0745380 AT1G01390.2 27.686 484 277 17 4 438 24 483 1.04e-31 127
Msa0745380 AT3G21800.1 25.502 498 298 19 1 446 1 477 1.39e-31 126
Msa0745380 AT2G36760.1 26.747 501 288 22 7 448 16 496 1.93e-31 126
Msa0745380 AT3G21750.1 25.615 488 290 18 6 444 5 468 5.59e-31 124
Msa0745380 AT2G29740.1 28.972 428 238 18 6 391 9 412 8.10e-31 124
Msa0745380 AT2G30150.2 27.014 422 272 12 6 416 14 410 1.25e-30 123
Msa0745380 AT3G53150.1 25.882 425 263 18 2 390 19 427 1.61e-30 124
Msa0745380 AT2G30150.1 27.078 421 267 13 9 416 1 394 4.49e-30 121
Msa0745380 AT2G36780.1 27.823 496 284 20 7 446 16 493 7.03e-30 122
Msa0745380 AT5G05890.1 23.841 453 302 13 6 432 9 444 7.64e-30 121
Msa0745380 AT4G15280.1 23.589 496 299 17 6 446 5 475 2.15e-29 120
Msa0745380 AT4G15280.2 23.589 496 299 17 6 446 37 507 2.86e-29 120
Msa0745380 AT4G34138.1 26.651 424 252 18 7 391 13 416 2.98e-29 120
Msa0745380 AT5G17030.1 34.146 205 121 7 209 406 218 415 5.04e-29 119
Msa0745380 AT3G21780.1 25.567 485 303 18 6 449 5 472 8.34e-29 118
Msa0745380 AT1G01420.1 26.526 475 280 19 4 432 7 458 1.53e-28 118
Msa0745380 AT1G01420.2 26.526 475 280 19 4 432 10 461 1.75e-28 117
Msa0745380 AT2G36750.1 27.123 424 243 19 7 389 12 410 1.84e-28 117
Msa0745380 AT2G36790.1 28.628 503 275 25 7 448 15 494 2.47e-28 117
Msa0745380 AT5G03490.1 27.231 437 274 19 2 414 16 432 2.49e-28 117
Msa0745380 AT2G29750.1 30.769 338 197 16 104 426 125 440 2.82e-28 117
Msa0745380 AT4G15260.1 25.606 371 226 12 111 446 1 356 3.71e-28 115
Msa0745380 AT1G07260.1 25.223 448 282 17 6 420 7 434 5.53e-28 116
Msa0745380 AT5G17040.2 37.255 153 91 3 256 406 148 297 2.23e-27 112
Msa0745380 AT5G17040.1 33.158 190 116 5 256 437 250 436 3.82e-27 113
Msa0745380 AT5G12890.1 36.275 204 106 7 230 415 250 447 1.91e-26 112
Msa0745380 AT1G10400.1 25.576 434 282 14 1 407 3 422 1.92e-26 111
Msa0745380 AT1G30530.1 38.312 154 88 4 256 408 261 408 2.59e-26 111
Msa0745380 AT3G16520.1 25.373 335 219 11 103 418 112 434 2.79e-25 108
Msa0745380 AT5G49690.1 37.629 194 105 7 222 408 233 417 2.88e-25 108
Msa0745380 AT1G07250.1 34.975 203 118 6 190 382 203 401 3.12e-25 108
Msa0745380 AT3G16520.2 25.373 335 219 11 103 418 112 434 3.14e-25 108
Msa0745380 AT3G16520.3 25.373 335 219 11 103 418 112 434 4.16e-25 107
Msa0745380 AT5G66690.1 33.478 230 114 7 230 429 234 454 6.35e-25 107
Msa0745380 AT2G29730.1 37.500 168 91 5 229 390 239 398 3.08e-24 105
Msa0745380 AT2G18560.1 35.349 215 106 8 230 422 148 351 6.96e-24 103
Msa0745380 AT3G50740.1 33.333 231 113 9 230 428 239 460 8.46e-24 104
Msa0745380 AT2G18570.1 33.766 231 115 9 230 432 238 458 1.10e-23 103
Msa0745380 AT1G73880.1 33.333 243 142 9 196 426 206 440 2.41e-23 102
Msa0745380 AT5G65550.1 38.961 154 87 4 222 373 236 384 3.66e-23 102
Msa0745380 AT5G26310.1 33.171 205 104 7 230 410 234 429 3.93e-23 102
Msa0745380 AT2G16890.2 24.550 444 288 18 6 424 10 431 5.65e-23 101
Msa0745380 AT2G29710.1 36.095 169 93 5 229 390 238 398 7.49e-23 101
Msa0745380 AT1G51210.1 35.593 177 95 6 257 432 269 427 7.87e-23 100
Msa0745380 AT2G16890.3 24.694 409 270 15 6 391 10 403 1.33e-22 100
Msa0745380 AT4G36770.1 24.731 465 253 16 8 415 7 431 4.72e-22 98.6
Msa0745380 AT2G22590.1 33.668 199 110 8 226 410 244 434 5.13e-22 98.6
Msa0745380 AT1G07240.1 28.163 245 154 7 190 420 202 438 7.19e-22 98.6
Msa0745380 AT4G27560.1 24.777 448 255 20 6 413 8 413 3.52e-21 96.3
Msa0745380 AT5G54010.1 23.934 422 284 13 10 413 11 413 8.21e-21 95.1
Msa0745380 AT4G27570.1 24.661 442 263 18 6 413 8 413 9.60e-21 94.7
Msa0745380 AT2G22930.1 24.026 462 291 19 10 447 11 436 7.01e-20 92.0
Msa0745380 AT5G54060.1 25.000 456 273 17 6 421 14 440 1.04e-19 91.7
Msa0745380 AT5G14860.1 26.036 338 220 12 99 424 120 439 1.18e-19 91.7
Msa0745380 AT1G06000.1 24.516 465 271 18 2 432 7 425 1.16e-18 88.6
Msa0745380 AT5G37950.2 25.641 273 176 10 95 358 76 330 7.47e-17 82.0
Msa0745380 AT5G53990.1 29.268 205 122 7 222 413 213 407 1.04e-16 82.4
Msa0745380 AT5G37950.1 25.725 276 178 10 95 358 76 336 1.85e-16 80.9
Msa0745380 AT1G64920.1 22.199 473 264 20 1 422 1 420 7.27e-16 80.1
Msa0745380 AT4G09500.2 23.355 471 290 19 10 449 11 441 7.29e-16 80.1
Msa0745380 AT1G64910.1 22.897 428 275 18 10 413 11 407 9.68e-16 79.7
Msa0745380 AT4G01070.2 24.581 358 227 12 2 332 5 346 2.02e-14 74.7
Msa0745380 AT1G50580.1 22.148 447 274 16 10 422 11 417 3.14e-14 75.1
Msa0745380 AT3G29630.2 27.751 209 128 8 259 452 220 420 1.76e-13 72.4
Msa0745380 AT3G29630.1 27.751 209 128 8 259 452 246 446 1.88e-13 72.4
Msa0745380 AT4G09500.1 28.155 206 125 8 259 449 219 416 5.79e-13 70.9

Find 131 sgRNAs with CRISPR-Local

Find 239 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAAATGGTTTGGCATTA+TGG 0.150471 5_1:+66857430 None:intergenic
CAAGTGACTGGCTTCTTTAT+TGG 0.171232 5_1:+66854348 None:intergenic
CAAGGTAAATCATAAATATT+TGG 0.188355 5_1:-66854529 Msa0745380:three_prime_UTR
CAAGATTTACCATGGCTTAT+TGG 0.196864 5_1:-66855463 Msa0745380:CDS
AATTCACCAAAAGCCATTTA+AGG 0.201087 5_1:+66855377 None:intergenic
GGAAAGCAAGATTTAAGTTT+TGG 0.219532 5_1:-66855426 Msa0745380:CDS
TCACTAAAACTCTCAGCTTT+TGG 0.227580 5_1:-66855264 Msa0745380:CDS
GGAAAGGCTTGGTTGTTTCT+TGG 0.240759 5_1:-66855024 Msa0745380:CDS
ATAGTTTACCTTTATTAAAA+AGG 0.244399 5_1:-66854126 Msa0745380:three_prime_UTR
TTTGAAGGAATTCTTCAAAA+TGG 0.256444 5_1:+66857417 None:intergenic
GAAAGGCTTGGTTGTTTCTT+GGG 0.266617 5_1:-66855023 Msa0745380:CDS
GTATCCCTACTGCTGGGTTT+TGG 0.274904 5_1:-66857316 Msa0745380:CDS
AAGAAACCTTAAATGGCTTT+TGG 0.280756 5_1:-66855383 Msa0745380:CDS
GGTAACACAACAATTTCTTT+TGG 0.290243 5_1:+66854912 None:intergenic
AAAGATCAAGAAACCTTAAA+TGG 0.295250 5_1:-66855390 Msa0745380:CDS
TTCAAATTTGATTCACCAAT+TGG 0.306544 5_1:+66855157 None:intergenic
GCTTCTTTATTGGATCATAA+TGG 0.325994 5_1:+66854358 None:intergenic
CTACAATGAGACCTTTCATT+TGG 0.330926 5_1:-66855111 Msa0745380:CDS
GTGATGGAAGATAAGGAAAT+AGG 0.334917 5_1:-66854779 Msa0745380:CDS
TTTGGTGGTGGTTGACTTGT+TGG 0.337073 5_1:-66857372 Msa0745380:CDS
TCAGTTGTTTATGTCTCATT+TGG 0.337928 5_1:-66855193 Msa0745380:CDS
TTCCTTCAAAATCAAAATCT+TGG 0.344532 5_1:-66857404 Msa0745380:CDS
CCATGGCTTATTGGAACAAT+TGG 0.346602 5_1:-66855454 Msa0745380:CDS
GGTTGACTTGTTGGCATCTT+GGG 0.347603 5_1:-66857363 Msa0745380:CDS
ATACAAGTGGCAAGCAAGTT+TGG 0.354288 5_1:-66857338 Msa0745380:CDS
TCAAAAGAATGATGAGTTGT+AGG 0.356322 5_1:+66854453 None:intergenic
AAACTTGCTTGCCACTTGTA+TGG 0.364744 5_1:+66857340 None:intergenic
TGAATTACTAATACTAACTT+TGG 0.368535 5_1:+66855339 None:intergenic
TTTATGTCTCATTTGGAAGT+TGG 0.370337 5_1:-66855186 Msa0745380:CDS
ATTTACCTTGTTTGTTGAAA+AGG 0.371474 5_1:+66854542 None:intergenic
GATCATCAAGTGGGTTGCTT+TGG 0.372181 5_1:-66857516 Msa0745380:CDS
TGGTTGACTTGTTGGCATCT+TGG 0.374518 5_1:-66857364 Msa0745380:CDS
AGGAATTCTTCAAAATGGTT+TGG 0.383346 5_1:+66857422 None:intergenic
AAGATTTGAGTTGCTTGAAA+TGG 0.388844 5_1:-66855237 Msa0745380:CDS
TTATGTCTCATTTGGAAGTT+GGG 0.388975 5_1:-66855185 Msa0745380:CDS
GATTCAATGGCAAAGAAATC+TGG 0.391010 5_1:+66857464 None:intergenic
ATACTAACTTTGGTTTCATT+CGG 0.393586 5_1:+66855349 None:intergenic
TCTCCATACCTCAACAATAT+AGG 0.401342 5_1:+66854859 None:intergenic
TGGCGTCAAGGATTACCAAT+TGG 0.403955 5_1:-66855073 Msa0745380:CDS
AAACAACTGAGTTAGTCTTT+TGG 0.407317 5_1:+66855206 None:intergenic
TTTCATATAATGTCATTAAC+CGG 0.409159 5_1:+66854753 None:intergenic
GAAAGAATCATGGGAATAGA+TGG 0.410738 5_1:-66854734 Msa0745380:CDS
TACAATGAGACCTTTCATTT+GGG 0.415374 5_1:-66855110 Msa0745380:CDS
GACATTATATGAAAGAATCA+TGG 0.417966 5_1:-66854744 Msa0745380:CDS
CTATAGGACCTATTTGTAGT+AGG 0.418997 5_1:-66855297 Msa0745380:CDS
ACAATGTAATTATATATTGA+TGG 0.420871 5_1:+66854595 None:intergenic
AAGTTTGGTATCCCTACTGC+TGG 0.421359 5_1:-66857323 Msa0745380:CDS
GGCGTCAAGGATTACCAATT+GGG 0.424425 5_1:-66855072 Msa0745380:CDS
CTACTACAAATAGGTCCTAT+AGG 0.427104 5_1:+66855298 None:intergenic
GGAAAGAGACGAGAATAGAT+AGG 0.433748 5_1:-66854105 Msa0745380:three_prime_UTR
TATAGGCACAATTCACAAAC+TGG 0.442144 5_1:+66854876 None:intergenic
AGAGTTGGTTTGAGACTCAA+TGG 0.447428 5_1:-66854839 Msa0745380:CDS
AGTGTCAAAATGAATTGCTT+TGG 0.448689 5_1:+66854416 None:intergenic
AAATCTTGGTGATGTATGTT+TGG 0.449308 5_1:-66857390 Msa0745380:CDS
TCACAAAGTGTGTTGCCTAT+AGG 0.453455 5_1:-66855313 Msa0745380:CDS
GCATTTGAGGCCATGTGTAT+TGG 0.454045 5_1:-66854497 Msa0745380:three_prime_UTR
TCATTAGGCCTACTACAAAT+AGG 0.456291 5_1:+66855289 None:intergenic
GGAAGTTGGGTCAATCCAAT+TGG 0.458893 5_1:-66855172 Msa0745380:CDS
AAGTGGGTTGCTTTGGCAGA+TGG 0.462755 5_1:-66857509 Msa0745380:CDS
GGTCTCCATGGATGATTCAA+TGG 0.470693 5_1:+66857451 None:intergenic
AGATATGAAGCAAGCATGGC+TGG 0.471333 5_1:+66857293 None:intergenic
ATTGTTGAGGTATGGAGAGT+TGG 0.473233 5_1:-66854854 Msa0745380:CDS
CTATCACGGCTTCAAATCCT+TGG 0.474044 5_1:+66857600 None:intergenic
AACATGTCCTTGTGCGGGAT+AGG 0.474993 5_1:+66857658 None:intergenic
TCTTCTTATGAACATGTTGA+GGG 0.479179 5_1:+66857573 None:intergenic
ACTCAATGGGTTTGGTGAAA+AGG 0.480140 5_1:-66854825 Msa0745380:CDS
TGGTGATGTATGTTTGGTGG+TGG 0.482122 5_1:-66857384 Msa0745380:CDS
GTTCCACAAAGGATTTCAAA+AGG 0.482478 5_1:+66854687 None:intergenic
ATCTTCTTATGAACATGTTG+AGG 0.482842 5_1:+66857572 None:intergenic
CAGCCATACCTCAGATGCTT+CGG 0.484580 5_1:-66857262 Msa0745380:CDS
CTTTGCCATTGAATCATCCA+TGG 0.489962 5_1:-66857456 Msa0745380:CDS
GGTTTGAGACTCAATGGGTT+TGG 0.492442 5_1:-66854833 Msa0745380:CDS
TTGGCTTGTATGTGCATTTG+AGG 0.497543 5_1:-66854510 Msa0745380:three_prime_UTR
ACTGGACTCATCTCTGATAC+AGG 0.498998 5_1:-66857239 Msa0745380:intron
TGCAAAGGTGATGGAAGATA+AGG 0.499828 5_1:-66854786 Msa0745380:CDS
GGTGAAAAGGATGTTGAAGA+AGG 0.504331 5_1:-66854812 Msa0745380:CDS
GCTTCTGTCTTTGTAAGCCA+AGG 0.505317 5_1:-66857617 Msa0745380:CDS
ACATGTCCTTGTGCGGGATA+GGG 0.509278 5_1:+66857659 None:intergenic
AAATCTTGTGTTGAAACTAC+AGG 0.510910 5_1:+66855478 None:intergenic
TTGTTGTGTTACCCTGTGGC+TGG 0.513828 5_1:-66854902 Msa0745380:CDS
GAATCTAGCATTGGCTCTTG+AGG 0.515286 5_1:-66855134 Msa0745380:CDS
ACAAAGGATTTCAAAAGGAA+AGG 0.519875 5_1:+66854692 None:intergenic
TTGAGGTCTTCTTGGCGTCA+AGG 0.520016 5_1:-66855085 Msa0745380:CDS
AACTTTGGTTTCATTCGGAA+AGG 0.524017 5_1:+66855354 None:intergenic
GGTTGCTTTGGCAGATGGAA+TGG 0.533478 5_1:-66857504 Msa0745380:CDS
AGTCCGAAGCATCTGAGGTA+TGG 0.536142 5_1:+66857259 None:intergenic
AAAATGCTTGAGACATTACT+AGG 0.540558 5_1:-66854309 Msa0745380:three_prime_UTR
ACATTATATGAAAGAATCAT+GGG 0.544809 5_1:-66854743 Msa0745380:CDS
GTGCCTATATTGTTGAGGTA+TGG 0.548817 5_1:-66854862 Msa0745380:CDS
GAGTTGGTTTGAGACTCAAT+GGG 0.549961 5_1:-66854838 Msa0745380:CDS
AGTTTGGTATCCCTACTGCT+GGG 0.551378 5_1:-66857322 Msa0745380:CDS
TTTCAAGCAAGGGAAAGGCT+TGG 0.553354 5_1:-66855035 Msa0745380:CDS
TTTGGCAGATGGAATGGAAG+AGG 0.556332 5_1:-66857498 Msa0745380:CDS
GCTGGCCAAAACCCAGCAGT+AGG 0.559312 5_1:+66857311 None:intergenic
CAAAAGATATGAAGCAAGCA+TGG 0.561363 5_1:+66857289 None:intergenic
AAATTTGAAGAATCTAGCAT+TGG 0.561755 5_1:-66855143 Msa0745380:CDS
ACTACTTAAGTTGTTTGACA+TGG 0.562297 5_1:+66854248 None:intergenic
GGACTAACATGTCCTTGTGC+GGG 0.565243 5_1:+66857653 None:intergenic
ATACCTCAGATGCTTCGGAC+TGG 0.566457 5_1:-66857257 Msa0745380:CDS
GACCTCAAAACCCAAATGAA+AGG 0.569510 5_1:+66855100 None:intergenic
GTTGAAACTACAGGCAATGC+AGG 0.571217 5_1:+66855487 None:intergenic
TGCTTGAGACATTACTAGGA+TGG 0.574184 5_1:-66854305 Msa0745380:three_prime_UTR
TCTTGGTGATGTATGTTTGG+TGG 0.580096 5_1:-66857387 Msa0745380:CDS
GTTTGGCATTATGGTCTCCA+TGG 0.581445 5_1:+66857439 None:intergenic
CATGGACTCTGCTGAAGATG+TGG 0.586835 5_1:+66854266 None:intergenic
AGAAGGACTTGCAAAGGTGA+TGG 0.587499 5_1:-66854795 Msa0745380:CDS
GTAGGGCTTCCCCAACATGA+AGG 0.588624 5_1:-66855526 Msa0745380:intron
TTTGTTCCCTATCCCGCACA+AGG 0.588723 5_1:-66857665 Msa0745380:CDS
CAATCTTTATCCAATACACA+TGG 0.594894 5_1:+66854487 None:intergenic
TTGTGGTTGGAATTCTACAT+TGG 0.600715 5_1:-66854948 Msa0745380:CDS
AGTCCAGTCCGAAGCATCTG+AGG 0.601208 5_1:+66857254 None:intergenic
GGGACTAACATGTCCTTGTG+CGG 0.601302 5_1:+66857652 None:intergenic
CTGGCCAAAACCCAGCAGTA+GGG 0.604840 5_1:+66857312 None:intergenic
TTTCAACACAAGATTTACCA+TGG 0.606852 5_1:-66855471 Msa0745380:CDS
AGAATCATGGGAATAGATGG+TGG 0.607191 5_1:-66854731 Msa0745380:CDS
AAGATAAGGAAATAGGTAGC+CGG 0.608978 5_1:-66854772 Msa0745380:CDS
GGCATCTTGGGCCATACAAG+TGG 0.610717 5_1:-66857351 Msa0745380:CDS
TACAGGCAATGCAGGTACAA+AGG 0.613001 5_1:+66855495 None:intergenic
GAATTGTGCCTATATTGTTG+AGG 0.616273 5_1:-66854867 Msa0745380:CDS
TTATTGGAACAATTGGTGCA+AGG 0.617442 5_1:-66855447 Msa0745380:CDS
CCAATTGTTCCAATAAGCCA+TGG 0.621867 5_1:+66855454 None:intergenic
TAGGGCTTCCCCAACATGAA+GGG 0.624127 5_1:-66855525 Msa0745380:CDS
TTGAGCTAGCTGTTCCACAA+AGG 0.627552 5_1:+66854676 None:intergenic
TGTTGAAGAAGGACTTGCAA+AGG 0.629631 5_1:-66854801 Msa0745380:CDS
TCTTATGAACATGTTGAGGG+AGG 0.640018 5_1:+66857576 None:intergenic
GATGGTGGTAACTATAAGAG+TGG 0.645698 5_1:-66854716 Msa0745380:CDS
ATGATGATAAGATCATCAAG+TGG 0.657079 5_1:-66857526 Msa0745380:CDS
ATGTTGAGGGAGGACTATCA+CGG 0.666547 5_1:+66857586 None:intergenic
CAAACTGGTCTCCAGCCACA+GGG 0.668092 5_1:+66854891 None:intergenic
TGATGATAAGATCATCAAGT+GGG 0.728728 5_1:-66857525 Msa0745380:CDS
GAAATTGTTGTGTTACCCTG+TGG 0.746774 5_1:-66854906 Msa0745380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAGTAAAAAG+AGG - chr5_1:66854859-66854878 Msa0745380:CDS 10.0%
!!! AATTTTATCTTCTTTTTTTA+AGG + chr5_1:66854907-66854926 None:intergenic 10.0%
!!! TTTTCAAAAGAAAAATATTT+AGG + chr5_1:66855315-66855334 None:intergenic 10.0%
!!! ATATATGTTGATAATTTAAA+AGG + chr5_1:66856179-66856198 None:intergenic 10.0%
!! TCACTAATAAAAAAAAAATT+AGG + chr5_1:66857550-66857569 None:intergenic 10.0%
!! GATATAAATACTTTATACTT+TGG - chr5_1:66854653-66854672 Msa0745380:CDS 15.0%
!! AAATGAAAATATGATATTAG+AGG - chr5_1:66854794-66854813 Msa0745380:CDS 15.0%
!!! TCAAATATATTTTTCCATTT+GGG + chr5_1:66855591-66855610 None:intergenic 15.0%
!!! TTCAAATATATTTTTCCATT+TGG + chr5_1:66855592-66855611 None:intergenic 15.0%
!!! TTTATTTGTTATATATCGAT+AGG - chr5_1:66855874-66855893 Msa0745380:intron 15.0%
!!! TTATTTGTTATATATCGATA+GGG - chr5_1:66855875-66855894 Msa0745380:intron 15.0%
!! AATTCTTGAACATTAATAAT+TGG + chr5_1:66855952-66855971 None:intergenic 15.0%
!!! ATATTTTATGTTCTTTCTTT+TGG - chr5_1:66856140-66856159 Msa0745380:intron 15.0%
!!! TATTTTATGTTCTTTCTTTT+GGG - chr5_1:66856141-66856160 Msa0745380:intron 15.0%
!! ATTTATGATGTTATATGTAT+TGG - chr5_1:66856197-66856216 Msa0745380:intron 15.0%
!!! TTAACTAAAATTTTGATGAA+TGG + chr5_1:66857112-66857131 None:intergenic 15.0%
!!! AATTTTAGTTAAATCTTCAT+TGG - chr5_1:66857120-66857139 Msa0745380:intron 15.0%
!! ACAATGTAATTATATATTGA+TGG + chr5_1:66857159-66857178 None:intergenic 15.0%
!! ATAGTTTACCTTTATTAAAA+AGG - chr5_1:66857625-66857644 Msa0745380:CDS 15.0%
!! TAAATTTGGCAAAACTATAT+TGG + chr5_1:66854701-66854720 None:intergenic 20.0%
!!! ATATAGTTTTGCCAAATTTA+CGG - chr5_1:66854701-66854720 Msa0745380:CDS 20.0%
!! ATATTTAGGTATTAATGAGT+TGG + chr5_1:66855301-66855320 None:intergenic 20.0%
!!! TTTTCTTTTGCATGATTTTT+TGG + chr5_1:66855487-66855506 None:intergenic 20.0%
!!! TGAATGTTTTTAAAGATCAT+GGG + chr5_1:66855517-66855536 None:intergenic 20.0%
!!! ATGAATGTTTTTAAAGATCA+TGG + chr5_1:66855518-66855537 None:intergenic 20.0%
!! TTGAAGTTAAAATGCATAAA+AGG + chr5_1:66855679-66855698 None:intergenic 20.0%
!! TAATATAGTTGTTAGCATAT+TGG - chr5_1:66855841-66855860 Msa0745380:intron 20.0%
!! TTGTCTATCAAGAAATAAAA+TGG - chr5_1:66856039-66856058 Msa0745380:intron 20.0%
!!! AATAAAATGGAAGTATTTGA+AGG - chr5_1:66856052-66856071 Msa0745380:intron 20.0%
!! TGAATTACTAATACTAACTT+TGG + chr5_1:66856415-66856434 None:intergenic 20.0%
!! TTTCATATAATGTCATTAAC+CGG + chr5_1:66857001-66857020 None:intergenic 20.0%
!! ACATTATATGAAAGAATCAT+GGG - chr5_1:66857008-66857027 Msa0745380:intron 20.0%
!! CAAGGTAAATCATAAATATT+TGG - chr5_1:66857222-66857241 Msa0745380:intron 20.0%
!! AAGCAAAAATTAAGTAACAT+CGG + chr5_1:66857592-66857611 None:intergenic 20.0%
! TTTGAAGGAATTCTTCAAAA+TGG + chr5_1:66854337-66854356 None:intergenic 25.0%
! TTCCTTCAAAATCAAAATCT+TGG - chr5_1:66854347-66854366 Msa0745380:three_prime_UTR 25.0%
! AAAACTTCTTTCCTTATTGT+GGG - chr5_1:66854555-66854574 Msa0745380:three_prime_UTR 25.0%
!!! TATAGTTTTGCCAAATTTAC+GGG - chr5_1:66854702-66854721 Msa0745380:CDS 25.0%
!! TTCAGTAGTCTTAATCATTT+GGG + chr5_1:66854941-66854960 None:intergenic 25.0%
!! ATTCAGTAGTCTTAATCATT+TGG + chr5_1:66854942-66854961 None:intergenic 25.0%
! TATATGATGTCATTACTTGT+TGG + chr5_1:66855019-66855038 None:intergenic 25.0%
! TTTCACTTATCTCATTTAGT+GGG + chr5_1:66855255-66855274 None:intergenic 25.0%
! ATTTCACTTATCTCATTTAG+TGG + chr5_1:66855256-66855275 None:intergenic 25.0%
!!! GAATGTTTTTAAAGATCATG+GGG + chr5_1:66855516-66855535 None:intergenic 25.0%
!! GATGTTATATGTATTGGTAT+TGG - chr5_1:66856203-66856222 Msa0745380:intron 25.0%
!!! TTATATGTATTGGTATTGGT+AGG - chr5_1:66856207-66856226 Msa0745380:intron 25.0%
!!! TATATGTATTGGTATTGGTA+GGG - chr5_1:66856208-66856227 Msa0745380:intron 25.0%
! AAAGATCAAGAAACCTTAAA+TGG - chr5_1:66856361-66856380 Msa0745380:intron 25.0%
!! ATACTAACTTTGGTTTCATT+CGG + chr5_1:66856405-66856424 None:intergenic 25.0%
!!! AGAGTTTTAGTGAAATCATT+AGG + chr5_1:66856480-66856499 None:intergenic 25.0%
! TTCAAATTTGATTCACCAAT+TGG + chr5_1:66856597-66856616 None:intergenic 25.0%
! AAATTTGAAGAATCTAGCAT+TGG - chr5_1:66856608-66856627 Msa0745380:intron 25.0%
! GACATTATATGAAAGAATCA+TGG - chr5_1:66857007-66857026 Msa0745380:intron 25.0%
!! ATTTACCTTGTTTGTTGAAA+AGG + chr5_1:66857212-66857231 None:intergenic 25.0%
!! CAAACAACTTAAGTAGTTTT+TGG - chr5_1:66857509-66857528 Msa0745380:CDS 25.0%
!!! GTTTTTGGACTTATATTTTG+AGG - chr5_1:66857524-66857543 Msa0745380:CDS 25.0%
!! GTCTCTTTCCTTTTTAATAA+AGG + chr5_1:66857636-66857655 None:intergenic 25.0%
TAGGGAACAAAAACGATTAT+TGG + chr5_1:66854077-66854096 None:intergenic 30.0%
TCTTCTTATGAACATGTTGA+GGG + chr5_1:66854181-66854200 None:intergenic 30.0%
ATCTTCTTATGAACATGTTG+AGG + chr5_1:66854182-66854201 None:intergenic 30.0%
ATGATGATAAGATCATCAAG+TGG - chr5_1:66854225-66854244 Msa0745380:three_prime_UTR 30.0%
TGATGATAAGATCATCAAGT+GGG - chr5_1:66854226-66854245 Msa0745380:three_prime_UTR 30.0%
! TTCAAAATGGTTTGGCATTA+TGG + chr5_1:66854324-66854343 None:intergenic 30.0%
AGGAATTCTTCAAAATGGTT+TGG + chr5_1:66854332-66854351 None:intergenic 30.0%
!!! CACCAAGATTTTGATTTTGA+AGG + chr5_1:66854352-66854371 None:intergenic 30.0%
!! AAATCTTGGTGATGTATGTT+TGG - chr5_1:66854361-66854380 Msa0745380:three_prime_UTR 30.0%
CAAAACTTCTTTCCTTATTG+TGG - chr5_1:66854554-66854573 Msa0745380:three_prime_UTR 30.0%
AAACTTCTTTCCTTATTGTG+GGG - chr5_1:66854556-66854575 Msa0745380:three_prime_UTR 30.0%
! CGATGAAATTCTTTGAGTTA+TGG - chr5_1:66854606-66854625 Msa0745380:three_prime_UTR 30.0%
TTATCTCATTTAGTGGGATA+AGG + chr5_1:66855249-66855268 None:intergenic 30.0%
! TAATGAGTTGGATCAAAACA+TGG + chr5_1:66855289-66855308 None:intergenic 30.0%
TCTTCAACGTGAAAAATTAG+TGG - chr5_1:66855461-66855480 Msa0745380:CDS 30.0%
CAATTCGAGGAACTAATTAA+TGG + chr5_1:66855567-66855586 None:intergenic 30.0%
TTAAAAAGTTTGCATTCCTG+TGG - chr5_1:66855737-66855756 Msa0745380:intron 30.0%
TTATAAAGTGCATATGCCAA+GGG + chr5_1:66855787-66855806 None:intergenic 30.0%
AAGGAGTAGTTTAGTCATAA+GGG - chr5_1:66856071-66856090 Msa0745380:intron 30.0%
!! GTCATAAGGGTTGATATTAA+AGG - chr5_1:66856084-66856103 Msa0745380:intron 30.0%
AAATCTTGTGTTGAAACTAC+AGG + chr5_1:66856276-66856295 None:intergenic 30.0%
TTTCAACACAAGATTTACCA+TGG - chr5_1:66856280-66856299 Msa0745380:intron 30.0%
!! GGAAAGCAAGATTTAAGTTT+TGG - chr5_1:66856325-66856344 Msa0745380:intron 30.0%
!!! TAAGTTTTGGATGAGAACAT+TGG - chr5_1:66856338-66856357 Msa0745380:intron 30.0%
! AAGAAACCTTAAATGGCTTT+TGG - chr5_1:66856368-66856387 Msa0745380:intron 30.0%
AATTCACCAAAAGCCATTTA+AGG + chr5_1:66856377-66856396 None:intergenic 30.0%
!! AAGATTTGAGTTGCTTGAAA+TGG - chr5_1:66856514-66856533 Msa0745380:intron 30.0%
!!! AAACAACTGAGTTAGTCTTT+TGG + chr5_1:66856548-66856567 None:intergenic 30.0%
TCAGTTGTTTATGTCTCATT+TGG - chr5_1:66856558-66856577 Msa0745380:intron 30.0%
TTTATGTCTCATTTGGAAGT+TGG - chr5_1:66856565-66856584 Msa0745380:intron 30.0%
TTATGTCTCATTTGGAAGTT+GGG - chr5_1:66856566-66856585 Msa0745380:intron 30.0%
TACAATGAGACCTTTCATTT+GGG - chr5_1:66856641-66856660 Msa0745380:intron 30.0%
! TTGCAAAATCTCTTTTTGTG+GGG + chr5_1:66856754-66856773 None:intergenic 30.0%
! GTTGCAAAATCTCTTTTTGT+GGG + chr5_1:66856755-66856774 None:intergenic 30.0%
! TGTTGCAAAATCTCTTTTTG+TGG + chr5_1:66856756-66856775 None:intergenic 30.0%
! ATTTTGCAACACAATTCTGT+AGG - chr5_1:66856765-66856784 Msa0745380:intron 30.0%
! GGTAACACAACAATTTCTTT+TGG + chr5_1:66856842-66856861 None:intergenic 30.0%
ACAAAGGATTTCAAAAGGAA+AGG + chr5_1:66857062-66857081 None:intergenic 30.0%
!!! TTTCCTTTTGAAATCCTTTG+TGG - chr5_1:66857061-66857080 Msa0745380:intron 30.0%
CAATCTTTATCCAATACACA+TGG + chr5_1:66857267-66857286 None:intergenic 30.0%
TCAAAAGAATGATGAGTTGT+AGG + chr5_1:66857301-66857320 None:intergenic 30.0%
AGTGTCAAAATGAATTGCTT+TGG + chr5_1:66857338-66857357 None:intergenic 30.0%
!! CAATTCATTTTGACACTCAA+TGG - chr5_1:66857341-66857360 Msa0745380:CDS 30.0%
GCTTCTTTATTGGATCATAA+TGG + chr5_1:66857396-66857415 None:intergenic 30.0%
AAAATGCTTGAGACATTACT+AGG - chr5_1:66857442-66857461 Msa0745380:CDS 30.0%
! ACTACTTAAGTTGTTTGACA+TGG + chr5_1:66857506-66857525 None:intergenic 30.0%
! ACAGAAGCTAGATTTTGCAT+GGG + chr5_1:66854122-66854141 None:intergenic 35.0%
GATTCAATGGCAAAGAAATC+TGG + chr5_1:66854290-66854309 None:intergenic 35.0%
CAAAAGATATGAAGCAAGCA+TGG + chr5_1:66854465-66854484 None:intergenic 35.0%
TGAGTTATGGTGAATCAATC+TGG - chr5_1:66854619-66854638 Msa0745380:three_prime_UTR 35.0%
GAGTTATGGTGAATCAATCT+GGG - chr5_1:66854620-66854639 Msa0745380:three_prime_UTR 35.0%
TGGAGAGCTCAACAAAATTA+CGG - chr5_1:66854673-66854692 Msa0745380:CDS 35.0%
GTTTGAATGACCCGTAAATT+TGG + chr5_1:66854715-66854734 None:intergenic 35.0%
GTTATAAAGTGCATATGCCA+AGG + chr5_1:66855788-66855807 None:intergenic 35.0%
GAAGGAGTAGTTTAGTCATA+AGG - chr5_1:66856070-66856089 Msa0745380:intron 35.0%
! GTAATTTTCCCTTCATGTTG+GGG + chr5_1:66856237-66856256 None:intergenic 35.0%
! GGTAATTTTCCCTTCATGTT+GGG + chr5_1:66856238-66856257 None:intergenic 35.0%
! AGGTAATTTTCCCTTCATGT+TGG + chr5_1:66856239-66856258 None:intergenic 35.0%
CAAGATTTACCATGGCTTAT+TGG - chr5_1:66856288-66856307 Msa0745380:intron 35.0%
TTATTGGAACAATTGGTGCA+AGG - chr5_1:66856304-66856323 Msa0745380:intron 35.0%
! AACTTTGGTTTCATTCGGAA+AGG + chr5_1:66856400-66856419 None:intergenic 35.0%
CTACTACAAATAGGTCCTAT+AGG + chr5_1:66856456-66856475 None:intergenic 35.0%
CTATAGGACCTATTTGTAGT+AGG - chr5_1:66856454-66856473 Msa0745380:intron 35.0%
TCATTAGGCCTACTACAAAT+AGG + chr5_1:66856465-66856484 None:intergenic 35.0%
! TCACTAAAACTCTCAGCTTT+TGG - chr5_1:66856487-66856506 Msa0745380:intron 35.0%
! CACTAAAACTCTCAGCTTTT+GGG - chr5_1:66856488-66856507 Msa0745380:intron 35.0%
CTACAATGAGACCTTTCATT+TGG - chr5_1:66856640-66856659 Msa0745380:intron 35.0%
! AGGATTACCAATTGGGTTTT+TGG - chr5_1:66856686-66856705 Msa0745380:intron 35.0%
!! GGTTGTTTTATCACTCATTG+TGG - chr5_1:66856786-66856805 Msa0745380:intron 35.0%
! GTTTTATCACTCATTGTGGT+TGG - chr5_1:66856790-66856809 Msa0745380:intron 35.0%
TTGTGGTTGGAATTCTACAT+TGG - chr5_1:66856803-66856822 Msa0745380:intron 35.0%
TATAGGCACAATTCACAAAC+TGG + chr5_1:66856878-66856897 None:intergenic 35.0%
GAATTGTGCCTATATTGTTG+AGG - chr5_1:66856884-66856903 Msa0745380:intron 35.0%
TCTCCATACCTCAACAATAT+AGG + chr5_1:66856895-66856914 None:intergenic 35.0%
! GTGATGGAAGATAAGGAAAT+AGG - chr5_1:66856972-66856991 Msa0745380:intron 35.0%
AAGATAAGGAAATAGGTAGC+CGG - chr5_1:66856979-66856998 Msa0745380:intron 35.0%
GAAAGAATCATGGGAATAGA+TGG - chr5_1:66857017-66857036 Msa0745380:intron 35.0%
GTTCCACAAAGGATTTCAAA+AGG + chr5_1:66857067-66857086 None:intergenic 35.0%
! AGAGTCCTTTTCAACAAACA+AGG - chr5_1:66857204-66857223 Msa0745380:intron 35.0%
!! GTTTTTCAATCACAAGTGAC+TGG + chr5_1:66857418-66857437 None:intergenic 35.0%
! GACAGAAGCTAGATTTTGCA+TGG + chr5_1:66854123-66854142 None:intergenic 40.0%
TCTTATGAACATGTTGAGGG+AGG + chr5_1:66854178-66854197 None:intergenic 40.0%
CTTTGCCATTGAATCATCCA+TGG - chr5_1:66854295-66854314 Msa0745380:three_prime_UTR 40.0%
!! TCTTGGTGATGTATGTTTGG+TGG - chr5_1:66854364-66854383 Msa0745380:three_prime_UTR 40.0%
! AAACTTGCTTGCCACTTGTA+TGG + chr5_1:66854414-66854433 None:intergenic 40.0%
ATACAAGTGGCAAGCAAGTT+TGG - chr5_1:66854413-66854432 Msa0745380:three_prime_UTR 40.0%
GAAAATGAGTCCCCACAATA+AGG + chr5_1:66854569-66854588 None:intergenic 40.0%
GAGGTTTAGGTGATTTCAAC+AGG + chr5_1:66855433-66855452 None:intergenic 40.0%
GAAGACATGTTGAGAGGTTT+AGG + chr5_1:66855446-66855465 None:intergenic 40.0%
! TTTCCATTTGGGACAATTCG+AGG + chr5_1:66855580-66855599 None:intergenic 40.0%
!!! TATAGTTTTGGTTGCTCCAC+AGG + chr5_1:66855756-66855775 None:intergenic 40.0%
! AGGGCTATGCACTATAGTTT+TGG + chr5_1:66855768-66855787 None:intergenic 40.0%
AAACTATAGTGCATAGCCCT+TGG - chr5_1:66855768-66855787 Msa0745380:intron 40.0%
! CATGCATCTTTGACTTTCTG+TGG + chr5_1:66855906-66855925 None:intergenic 40.0%
CCAATTGTTCCAATAAGCCA+TGG + chr5_1:66856300-66856319 None:intergenic 40.0%
CCATGGCTTATTGGAACAAT+TGG - chr5_1:66856297-66856316 Msa0745380:intron 40.0%
TCACAAAGTGTGTTGCCTAT+AGG - chr5_1:66856438-66856457 Msa0745380:intron 40.0%
!! GACCTTTCATTTGGGTTTTG+AGG - chr5_1:66856649-66856668 Msa0745380:intron 40.0%
GACCTCAAAACCCAAATGAA+AGG + chr5_1:66856654-66856673 None:intergenic 40.0%
!!! TTTGGGTTTTGAGGTCTTCT+TGG - chr5_1:66856658-66856677 Msa0745380:intron 40.0%
!! TACCAATTGGGTTTTTGGAG+AGG - chr5_1:66856691-66856710 Msa0745380:intron 40.0%
!! ACCAATTGGGTTTTTGGAGA+GGG - chr5_1:66856692-66856711 Msa0745380:intron 40.0%
!! GAAAGGCTTGGTTGTTTCTT+GGG - chr5_1:66856728-66856747 Msa0745380:intron 40.0%
GAAATTGTTGTGTTACCCTG+TGG - chr5_1:66856845-66856864 Msa0745380:intron 40.0%
GTGCCTATATTGTTGAGGTA+TGG - chr5_1:66856889-66856908 Msa0745380:intron 40.0%
ATTGTTGAGGTATGGAGAGT+TGG - chr5_1:66856897-66856916 Msa0745380:intron 40.0%
!! AGAGTTGGTTTGAGACTCAA+TGG - chr5_1:66856912-66856931 Msa0745380:intron 40.0%
!! GAGTTGGTTTGAGACTCAAT+GGG - chr5_1:66856913-66856932 Msa0745380:intron 40.0%
!! ACTCAATGGGTTTGGTGAAA+AGG - chr5_1:66856926-66856945 Msa0745380:intron 40.0%
GGTGAAAAGGATGTTGAAGA+AGG - chr5_1:66856939-66856958 Msa0745380:intron 40.0%
TGTTGAAGAAGGACTTGCAA+AGG - chr5_1:66856950-66856969 Msa0745380:intron 40.0%
!! TGCAAAGGTGATGGAAGATA+AGG - chr5_1:66856965-66856984 Msa0745380:intron 40.0%
AGAATCATGGGAATAGATGG+TGG - chr5_1:66857020-66857039 Msa0745380:intron 40.0%
! GATGGTGGTAACTATAAGAG+TGG - chr5_1:66857035-66857054 Msa0745380:intron 40.0%
!! TTGGCTTGTATGTGCATTTG+AGG - chr5_1:66857241-66857260 Msa0745380:CDS 40.0%
!! CAAGTGACTGGCTTCTTTAT+TGG + chr5_1:66857406-66857425 None:intergenic 40.0%
TGCTTGAGACATTACTAGGA+TGG - chr5_1:66857446-66857465 Msa0745380:CDS 40.0%
GGAAAGAGACGAGAATAGAT+AGG - chr5_1:66857646-66857665 Msa0745380:CDS 40.0%
GCTTCTGTCTTTGTAAGCCA+AGG - chr5_1:66854134-66854153 Msa0745380:three_prime_UTR 45.0%
CTATCACGGCTTCAAATCCT+TGG + chr5_1:66854154-66854173 None:intergenic 45.0%
ATGTTGAGGGAGGACTATCA+CGG + chr5_1:66854168-66854187 None:intergenic 45.0%
!! GATCATCAAGTGGGTTGCTT+TGG - chr5_1:66854235-66854254 Msa0745380:three_prime_UTR 45.0%
TTTGGCAGATGGAATGGAAG+AGG - chr5_1:66854253-66854272 Msa0745380:three_prime_UTR 45.0%
GGTCTCCATGGATGATTCAA+TGG + chr5_1:66854303-66854322 None:intergenic 45.0%
GTTTGGCATTATGGTCTCCA+TGG + chr5_1:66854315-66854334 None:intergenic 45.0%
! TGGTGATGTATGTTTGGTGG+TGG - chr5_1:66854367-66854386 Msa0745380:three_prime_UTR 45.0%
!! TTTGGTGGTGGTTGACTTGT+TGG - chr5_1:66854379-66854398 Msa0745380:three_prime_UTR 45.0%
!! TGGTTGACTTGTTGGCATCT+TGG - chr5_1:66854387-66854406 Msa0745380:three_prime_UTR 45.0%
!! GGTTGACTTGTTGGCATCTT+GGG - chr5_1:66854388-66854407 Msa0745380:three_prime_UTR 45.0%
AAGTTTGGTATCCCTACTGC+TGG - chr5_1:66854428-66854447 Msa0745380:three_prime_UTR 45.0%
AGTTTGGTATCCCTACTGCT+GGG - chr5_1:66854429-66854448 Msa0745380:three_prime_UTR 45.0%
AGATATGAAGCAAGCATGGC+TGG + chr5_1:66854461-66854480 None:intergenic 45.0%
ACTGGACTCATCTCTGATAC+AGG - chr5_1:66854512-66854531 Msa0745380:three_prime_UTR 45.0%
TGGTGAGGATAAGGGACATA+AGG + chr5_1:66854983-66855002 None:intergenic 45.0%
TATGTCCCTTATCCTCACCA+TGG - chr5_1:66854983-66855002 Msa0745380:CDS 45.0%
ATGTCCCTTATCCTCACCAT+GGG - chr5_1:66854984-66855003 Msa0745380:CDS 45.0%
! TTGTTGGTGTTTACCTCCCA+TGG + chr5_1:66855003-66855022 None:intergenic 45.0%
CACGTTGAAGACATGTTGAG+AGG + chr5_1:66855452-66855471 None:intergenic 45.0%
GTTCCTCGAATTGTCCCAAA+TGG - chr5_1:66855574-66855593 Msa0745380:intron 45.0%
TACAGGCAATGCAGGTACAA+AGG + chr5_1:66856259-66856278 None:intergenic 45.0%
GTTGAAACTACAGGCAATGC+AGG + chr5_1:66856267-66856286 None:intergenic 45.0%
GGAAGTTGGGTCAATCCAAT+TGG - chr5_1:66856579-66856598 Msa0745380:intron 45.0%
!! GAATCTAGCATTGGCTCTTG+AGG - chr5_1:66856617-66856636 Msa0745380:intron 45.0%
TGGCGTCAAGGATTACCAAT+TGG - chr5_1:66856678-66856697 Msa0745380:intron 45.0%
GGCGTCAAGGATTACCAATT+GGG - chr5_1:66856679-66856698 Msa0745380:intron 45.0%
ACCCTCTCCAAAAACCCAAT+TGG + chr5_1:66856696-66856715 None:intergenic 45.0%
!! TTGGAGAGGGTTTTCAAGCA+AGG - chr5_1:66856705-66856724 Msa0745380:intron 45.0%
!! TGGAGAGGGTTTTCAAGCAA+GGG - chr5_1:66856706-66856725 Msa0745380:intron 45.0%
!! AGGGTTTTCAAGCAAGGGAA+AGG - chr5_1:66856711-66856730 Msa0745380:intron 45.0%
TTTCAAGCAAGGGAAAGGCT+TGG - chr5_1:66856716-66856735 Msa0745380:intron 45.0%
!! GGAAAGGCTTGGTTGTTTCT+TGG - chr5_1:66856727-66856746 Msa0745380:intron 45.0%
! GGTTTGAGACTCAATGGGTT+TGG - chr5_1:66856918-66856937 Msa0745380:intron 45.0%
AGAAGGACTTGCAAAGGTGA+TGG - chr5_1:66856956-66856975 Msa0745380:intron 45.0%
TTGAGCTAGCTGTTCCACAA+AGG + chr5_1:66857078-66857097 None:intergenic 45.0%
! GCATTTGAGGCCATGTGTAT+TGG - chr5_1:66857254-66857273 Msa0745380:CDS 45.0%
!!! TATAACAAATAAAATTTTAA+AGG + chr5_1:66855867-66855886 None:intergenic 5.0%
TTTGTTCCCTATCCCGCACA+AGG - chr5_1:66854086-66854105 Msa0745380:three_prime_UTR 50.0%
ACATGTCCTTGTGCGGGATA+GGG + chr5_1:66854095-66854114 None:intergenic 50.0%
AACATGTCCTTGTGCGGGAT+AGG + chr5_1:66854096-66854115 None:intergenic 50.0%
GGACTAACATGTCCTTGTGC+GGG + chr5_1:66854101-66854120 None:intergenic 50.0%
GGGACTAACATGTCCTTGTG+CGG + chr5_1:66854102-66854121 None:intergenic 50.0%
!! AAGTGGGTTGCTTTGGCAGA+TGG - chr5_1:66854242-66854261 Msa0745380:three_prime_UTR 50.0%
! GGTTGCTTTGGCAGATGGAA+TGG - chr5_1:66854247-66854266 Msa0745380:three_prime_UTR 50.0%
! GTATCCCTACTGCTGGGTTT+TGG - chr5_1:66854435-66854454 Msa0745380:three_prime_UTR 50.0%
CAGCCATACCTCAGATGCTT+CGG - chr5_1:66854489-66854508 Msa0745380:three_prime_UTR 50.0%
! AGTCCGAAGCATCTGAGGTA+TGG + chr5_1:66854495-66854514 None:intergenic 50.0%
ATACCTCAGATGCTTCGGAC+TGG - chr5_1:66854494-66854513 Msa0745380:three_prime_UTR 50.0%
ACCTCCCATGGTGAGGATAA+GGG + chr5_1:66854991-66855010 None:intergenic 50.0%
TACCTCCCATGGTGAGGATA+AGG + chr5_1:66854992-66855011 None:intergenic 50.0%
TAGGGCTTCCCCAACATGAA+GGG - chr5_1:66856226-66856245 Msa0745380:intron 50.0%
TTGAGGTCTTCTTGGCGTCA+AGG - chr5_1:66856666-66856685 Msa0745380:intron 50.0%
TTGTTGTGTTACCCTGTGGC+TGG - chr5_1:66856849-66856868 Msa0745380:intron 50.0%
CATGGACTCTGCTGAAGATG+TGG + chr5_1:66857488-66857507 None:intergenic 50.0%
GGCATCTTGGGCCATACAAG+TGG - chr5_1:66854400-66854419 Msa0745380:three_prime_UTR 55.0%
CTGGCCAAAACCCAGCAGTA+GGG + chr5_1:66854442-66854461 None:intergenic 55.0%
! AGTCCAGTCCGAAGCATCTG+AGG + chr5_1:66854500-66854519 None:intergenic 55.0%
TCCCTTATCCTCACCATGGG+AGG - chr5_1:66854987-66855006 Msa0745380:CDS 55.0%
GGTGTTTACCTCCCATGGTG+AGG + chr5_1:66854998-66855017 None:intergenic 55.0%
GTAGGGCTTCCCCAACATGA+AGG - chr5_1:66856225-66856244 Msa0745380:intron 55.0%
! CAAACTGGTCTCCAGCCACA+GGG + chr5_1:66856863-66856882 None:intergenic 55.0%
! ACAAACTGGTCTCCAGCCAC+AGG + chr5_1:66856864-66856883 None:intergenic 55.0%
GCTGGCCAAAACCCAGCAGT+AGG + chr5_1:66854443-66854462 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 66854065 66857708 66854065 ID=Msa0745380;Name=Msa0745380
chr5_1 mRNA 66854065 66857708 66854065 ID=Msa0745380-mRNA-1;Parent=Msa0745380;Name=Msa0745380-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.5|1|1|1|2|581|455
chr5_1 exon 66854065 66855544 66854065 ID=Msa0745380-mRNA-1:exon:19835;Parent=Msa0745380-mRNA-1
chr5_1 exon 66857240 66857708 66857240 ID=Msa0745380-mRNA-1:exon:19834;Parent=Msa0745380-mRNA-1
chr5_1 CDS 66857240 66857708 66857240 ID=Msa0745380-mRNA-1:cds;Parent=Msa0745380-mRNA-1
chr5_1 CDS 66854646 66855544 66854646 ID=Msa0745380-mRNA-1:cds;Parent=Msa0745380-mRNA-1
chr5_1 three_prime_UTR 66854065 66854645 66854065 ID=Msa0745380-mRNA-1:three_prime_utr;Parent=Msa0745380-mRNA-1
Gene Sequence

>Msa0745380

ATGAAGAAGCCAATAATCGTTTTTGTTCCCTATCCCGCACAAGGACATGTTAGTCCCATGCAAAATCTAGCTTCTGTCTTTGTAAGCCAAGGATTTGAAGCCGTGATAGTCCTCCCTCAACATGTTCATAAGAAGATTAATAATAATAATGATGATGATGATGATGATAAGATCATCAAGTGGGTTGCTTTGGCAGATGGAATGGAAGAGGATAGTACAACACCAGATTTCTTTGCCATTGAATCATCCATGGAGACCATAATGCCAAACCATTTTGAAGAATTCCTTCAAAATCAAAATCTTGGTGATGTATGTTTGGTGGTGGTTGACTTGTTGGCATCTTGGGCCATACAAGTGGCAAGCAAGTTTGGTATCCCTACTGCTGGGTTTTGGCCAGCCATGCTTGCTTCATATCTTTTGATTGCAGCCATACCTCAGATGCTTCGGACTGGACTCATCTCTGATACAGGGCTTCCCCAACATGAAGGGAAAATTACCTTTGTACCTGCATTGCCTGTAGTTTCAACACAAGATTTACCATGGCTTATTGGAACAATTGGTGCAAGGAAAGCAAGATTTAAGTTTTGGATGAGAACATTGGAAAGATCAAGAAACCTTAAATGGCTTTTGGTGAATTCCTTTCCGAATGAAACCAAAGTTAGTATTAGTAATTCACATTCACAAAGTGTGTTGCCTATAGGACCTATTTGTAGTAGGCCTAATGATTTCACTAAAACTCTCAGCTTTTGGGAACAAGATTTGAGTTGCTTGAAATGGCTAGCAAACCAAAAGACTAACTCAGTTGTTTATGTCTCATTTGGAAGTTGGGTCAATCCAATTGGTGAATCAAATTTGAAGAATCTAGCATTGGCTCTTGAGGCTACAATGAGACCTTTCATTTGGGTTTTGAGGTCTTCTTGGCGTCAAGGATTACCAATTGGGTTTTTGGAGAGGGTTTTCAAGCAAGGGAAAGGCTTGGTTGTTTCTTGGGCCCCACAAAAAGAGATTTTGCAACACAATTCTGTAGGTTGTTTTATCACTCATTGTGGTTGGAATTCTACATTGGAAGCATTACAATTCCAAAAGAAATTGTTGTGTTACCCTGTGGCTGGAGACCAGTTTGTGAATTGTGCCTATATTGTTGAGGTATGGAGAGTTGGTTTGAGACTCAATGGGTTTGGTGAAAAGGATGTTGAAGAAGGACTTGCAAAGGTGATGGAAGATAAGGAAATAGGTAGCCGGTTAATGACATTATATGAAAGAATCATGGGAATAGATGGTGGTAACTATAAGAGTGGTCCTTTCCTTTTGAAATCCTTTGTGGAACAGCTAGCTCAAGAAAACATCTACCATTCATCAAAATTTTAG
Protein sequence

>Msa0745380

MKKPIIVFVPYPAQGHVSPMQNLASVFVSQGFEAVIVLPQHVHKKINNNNDDDDDDKIIKWVALADGMEEDSTTPDFFAIESSMETIMPNHFEEFLQNQNLGDVCLVVVDLLASWAIQVASKFGIPTAGFWPAMLASYLLIAAIPQMLRTGLISDTGLPQHEGKITFVPALPVVSTQDLPWLIGTIGARKARFKFWMRTLERSRNLKWLLVNSFPNETKVSISNSHSQSVLPIGPICSRPNDFTKTLSFWEQDLSCLKWLANQKTNSVVYVSFGSWVNPIGESNLKNLALALEATMRPFIWVLRSSWRQGLPIGFLERVFKQGKGLVVSWAPQKEILQHNSVGCFITHCGWNSTLEALQFQKKLLCYPVAGDQFVNCAYIVEVWRVGLRLNGFGEKDVEEGLAKVMEDKEIGSRLMTLYERIMGIDGGNYKSGPFLLKSFVEQLAQENIYHSSKF*