Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746190 | MCH79656.1 | 59.486 | 506 | 186 | 8 | 1 | 487 | 1 | 506 | 0.0 | 561 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746190 | A0A392LXJ4 | 59.486 | 506 | 186 | 8 | 1 | 487 | 1 | 506 | 0.0 | 561 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0746190 | Msa0812090 | 0.865430 | 5.940353e-65 | -8.615850e-47 |
| Msa0746190 | Msa0852330 | 0.884930 | 1.258825e-71 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746190 | MtrunA17_Chr7g0275031 | 57.895 | 494 | 195 | 6 | 1 | 487 | 1 | 488 | 0.0 | 542 |
| Msa0746190 | MtrunA17_Chr7g0273381 | 58.367 | 490 | 185 | 8 | 1 | 488 | 1 | 473 | 0.0 | 536 |
| Msa0746190 | MtrunA17_Chr1g0210341 | 54.790 | 334 | 144 | 5 | 158 | 488 | 9 | 338 | 8.82e-107 | 321 |
| Msa0746190 | MtrunA17_Chr7g0274761 | 58.400 | 250 | 95 | 3 | 1 | 246 | 1 | 245 | 4.52e-87 | 268 |
| Msa0746190 | MtrunA17_Chr5g0442431 | 60.248 | 161 | 64 | 0 | 96 | 256 | 6 | 166 | 4.09e-61 | 197 |
| Msa0746190 | MtrunA17_Chr6g0453901 | 32.792 | 308 | 170 | 8 | 2 | 305 | 5 | 279 | 1.14e-35 | 138 |
| Msa0746190 | MtrunA17_Chr6g0453821 | 32.792 | 308 | 170 | 8 | 2 | 305 | 5 | 279 | 3.17e-35 | 138 |
| Msa0746190 | MtrunA17_Chr7g0266931 | 31.126 | 302 | 183 | 7 | 6 | 304 | 35 | 314 | 2.05e-30 | 120 |
| Msa0746190 | MtrunA17_Chr7g0254311 | 30.667 | 300 | 175 | 9 | 7 | 304 | 10 | 278 | 1.32e-27 | 114 |
| Msa0746190 | MtrunA17_Chr7g0260121 | 33.871 | 248 | 141 | 7 | 7 | 254 | 12 | 236 | 1.16e-26 | 113 |
| Msa0746190 | MtrunA17_Chr7g0254851 | 28.205 | 390 | 226 | 12 | 6 | 369 | 9 | 370 | 1.59e-26 | 113 |
| Msa0746190 | MtrunA17_Chr7g0254851 | 26.641 | 259 | 169 | 9 | 196 | 443 | 292 | 540 | 8.74e-11 | 64.3 |
| Msa0746190 | MtrunA17_Chr7g0254771 | 29.766 | 299 | 181 | 7 | 6 | 304 | 9 | 278 | 6.18e-24 | 105 |
| Msa0746190 | MtrunA17_Chr7g0254771 | 27.509 | 269 | 163 | 8 | 207 | 467 | 305 | 549 | 1.37e-13 | 73.2 |
| Msa0746190 | MtrunA17_Chr2g0312391 | 31.873 | 251 | 154 | 6 | 2 | 252 | 13 | 246 | 1.05e-23 | 101 |
| Msa0746190 | MtrunA17_Chr7g0274771 | 70.690 | 58 | 17 | 0 | 387 | 444 | 1 | 58 | 7.07e-23 | 92.0 |
| Msa0746190 | MtrunA17_Chr3g0079861 | 29.960 | 247 | 150 | 5 | 8 | 254 | 16 | 239 | 2.54e-21 | 97.4 |
| Msa0746190 | MtrunA17_Chr7g0258241 | 29.078 | 282 | 162 | 8 | 91 | 347 | 24 | 292 | 7.20e-20 | 91.3 |
| Msa0746190 | MtrunA17_Chr7g0260261 | 29.600 | 250 | 149 | 6 | 8 | 254 | 16 | 241 | 9.57e-20 | 92.4 |
| Msa0746190 | MtrunA17_Chr7g0260261 | 26.562 | 320 | 198 | 12 | 193 | 487 | 296 | 603 | 5.94e-12 | 68.2 |
| Msa0746190 | MtrunA17_Chr7g0256081 | 31.518 | 257 | 137 | 12 | 6 | 254 | 45 | 270 | 3.12e-18 | 87.8 |
| Msa0746190 | MtrunA17_Chr7g0256081 | 26.573 | 286 | 175 | 9 | 193 | 467 | 324 | 585 | 5.77e-12 | 68.2 |
| Msa0746190 | MtrunA17_Chr7g0260111 | 34.359 | 195 | 109 | 6 | 7 | 200 | 11 | 187 | 4.19e-17 | 82.4 |
| Msa0746190 | MtrunA17_Chr7g0267251 | 26.493 | 268 | 165 | 9 | 209 | 468 | 37 | 280 | 6.22e-17 | 81.3 |
| Msa0746190 | MtrunA17_Chr6g0478831 | 29.508 | 183 | 110 | 4 | 6 | 188 | 9 | 172 | 9.80e-16 | 75.5 |
| Msa0746190 | MtrunA17_Chr2g0293781 | 29.502 | 261 | 112 | 9 | 88 | 284 | 20 | 272 | 2.08e-14 | 74.3 |
| Msa0746190 | MtrunA17_Chr8g0362281 | 25.616 | 406 | 260 | 16 | 90 | 478 | 89 | 469 | 1.66e-12 | 69.3 |
| Msa0746190 | MtrunA17_Chr2g0312381 | 27.419 | 186 | 122 | 6 | 289 | 466 | 1 | 181 | 8.31e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 99 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTTCAACTACGCAGTTTA+TGG | 0.130996 | 5_1:-68278577 | None:intergenic |
| GAGAAAGATGGGAGTGAATT+TGG | 0.132619 | 5_1:-68278350 | None:intergenic |
| AGTATCAATCTTCTCTTTCT+AGG | 0.199865 | 5_1:+68279615 | Msa0746190:CDS |
| TTGTGTCATCTCAAGATTAT+AGG | 0.236337 | 5_1:+68279933 | Msa0746190:CDS |
| GAACCTTACTCGAGATAAAA+TGG | 0.244158 | 5_1:+68279179 | Msa0746190:exon |
| ACTAAAAGTTTCTGCAAAAT+AGG | 0.249125 | 5_1:-68280428 | None:intergenic |
| TGGAATAAAGTCGCAATTAA+AGG | 0.262708 | 5_1:-68279760 | None:intergenic |
| AAACCAATGAACGTAGTTTA+AGG | 0.265682 | 5_1:-68280016 | None:intergenic |
| AAAACTTGAGCTAATAGTTC+TGG | 0.267352 | 5_1:+68284614 | Msa0746190:CDS |
| AGAAAGATGGGAGTGAATTT+GGG | 0.326547 | 5_1:-68278349 | None:intergenic |
| TTTCATGGTGAACTTTCATT+TGG | 0.327756 | 5_1:+68279530 | Msa0746190:CDS |
| GATCCTTCTTCTTCAGTTCA+TGG | 0.333547 | 5_1:+68278437 | Msa0746190:five_prime_UTR |
| TGGTTTACCGTGGATATATA+TGG | 0.340282 | 5_1:+68280033 | Msa0746190:CDS |
| AAGAGAGTCATCAATTTAGA+TGG | 0.344617 | 5_1:+68279438 | Msa0746190:CDS |
| TTGATGACTCTCTTTATAGT+AGG | 0.344969 | 5_1:-68279429 | None:intergenic |
| ACCTCATCCTTTCCTTGAGC+TGG | 0.349036 | 5_1:+68280345 | Msa0746190:CDS |
| TTTACAAGGAACCGTGGATA+TGG | 0.362010 | 5_1:-68284468 | None:intergenic |
| TAATAGTTCTGGGTCCCTAT+TGG | 0.365075 | 5_1:+68284625 | Msa0746190:CDS |
| AAGATCTTCATTGAATGAAA+TGG | 0.369470 | 5_1:-68280111 | None:intergenic |
| TGAGTCATTTCCTTCCCAAT+AGG | 0.369669 | 5_1:-68284640 | None:intergenic |
| TTGCCTTAAACTACGTTCAT+TGG | 0.380340 | 5_1:+68280013 | Msa0746190:CDS |
| CAAGATTATAGGGTGCTATA+TGG | 0.383951 | 5_1:+68279944 | Msa0746190:CDS |
| ATCGCTTGAAGAAGTAGAAT+TGG | 0.386166 | 5_1:+68279803 | Msa0746190:CDS |
| AAGGATCGTCGTAGAGAGAT+AGG | 0.387864 | 5_1:-68278421 | None:intergenic |
| GAGTCATTTCCTTCCCAATA+GGG | 0.390477 | 5_1:-68284639 | None:intergenic |
| AATAGTTCTGGGTCCCTATT+GGG | 0.394643 | 5_1:+68284626 | Msa0746190:CDS |
| TGGGAGGTTGCGTTGGCAAT+TGG | 0.402333 | 5_1:+68284550 | Msa0746190:CDS |
| CACAATCGTCGATTCTTTCA+TGG | 0.405260 | 5_1:+68279515 | Msa0746190:CDS |
| TGTGTCATCTCAAGATTATA+GGG | 0.410391 | 5_1:+68279934 | Msa0746190:CDS |
| CTTCATCTCTAAACCATCTT+CGG | 0.410662 | 5_1:+68279712 | Msa0746190:CDS |
| TGAGAAAGTTTGCTGGTGTT+GGG | 0.414595 | 5_1:-68278394 | None:intergenic |
| GGTGCAAGCTTTCTGCTCTA+AGG | 0.421048 | 5_1:+68279301 | Msa0746190:CDS |
| TCCATAAACTGCGTAGTTGA+AGG | 0.423422 | 5_1:+68278576 | Msa0746190:five_prime_UTR |
| TGGGAAGGAAATGACTCATT+GGG | 0.438232 | 5_1:+68284645 | Msa0746190:CDS |
| TTGGGAAGGAAATGACTCAT+TGG | 0.442797 | 5_1:+68284644 | Msa0746190:CDS |
| GTGAGAAAGTTTGCTGGTGT+TGG | 0.448865 | 5_1:-68278395 | None:intergenic |
| GGAATAAAGTCGCAATTAAA+GGG | 0.449804 | 5_1:-68279759 | None:intergenic |
| AAACTTGAGCTAATAGTTCT+GGG | 0.458817 | 5_1:+68284615 | Msa0746190:CDS |
| TTTCATATCTTCAATGTGCT+TGG | 0.462836 | 5_1:+68279336 | Msa0746190:CDS |
| TGAGTTCAAATCATCAAAGT+TGG | 0.467816 | 5_1:+68279893 | Msa0746190:CDS |
| AGGAAAGTGAGAAAGTTTGC+TGG | 0.474317 | 5_1:-68278401 | None:intergenic |
| AAGCCATCTTAGTATCTAGA+AGG | 0.479268 | 5_1:+68279277 | Msa0746190:CDS |
| AACTGTCTAAGATGTTTGAA+TGG | 0.490498 | 5_1:-68280320 | None:intergenic |
| TGGGAAATCTTAAATGATGT+AGG | 0.491001 | 5_1:+68280365 | Msa0746190:CDS |
| GTAGTTGAAGGCTGTTGAAA+AGG | 0.499081 | 5_1:+68278588 | Msa0746190:five_prime_UTR |
| AAGTCGATGCTCTTCACCAT+AGG | 0.501755 | 5_1:-68280086 | None:intergenic |
| GATCGTATGTGGTTTAAAAG+TGG | 0.503401 | 5_1:+68284678 | Msa0746190:CDS |
| TGATGACTCTCTTTATAGTA+GGG | 0.505641 | 5_1:-68279428 | None:intergenic |
| ATTTAAGATTTCCCAGCTCA+AGG | 0.507325 | 5_1:-68280357 | None:intergenic |
| CCTCATCCTTTCCTTGAGCT+GGG | 0.507544 | 5_1:+68280346 | Msa0746190:CDS |
| GGTTTAAAAGTGGGCGTGAA+AGG | 0.508005 | 5_1:+68284688 | Msa0746190:CDS |
| GGCTTTCGACAAATCTTCCA+TGG | 0.509166 | 5_1:-68279259 | None:intergenic |
| GCAAAATAGGAGAAGCTTGG+AGG | 0.510608 | 5_1:-68280415 | None:intergenic |
| TATCTTTACAACTTTATCCA+TGG | 0.510752 | 5_1:+68279242 | Msa0746190:CDS |
| ACATGCATAATCTCAAGTTC+AGG | 0.512733 | 5_1:-68280161 | None:intergenic |
| CAGCGCCGTCGAGAGAAAGA+TGG | 0.518583 | 5_1:-68278362 | None:intergenic |
| CACTCCCATCTTTCTCTCGA+CGG | 0.525816 | 5_1:+68278357 | Msa0746190:five_prime_UTR |
| CGTGAACATTAATACCCCTA+TGG | 0.529668 | 5_1:+68280070 | Msa0746190:CDS |
| AAAGCAACACTATTGATCAA+TGG | 0.531010 | 5_1:+68279562 | Msa0746190:CDS |
| AATTTCCCTATCACAAAACT+CGG | 0.531478 | 5_1:+68279399 | Msa0746190:CDS |
| TCAATCTTCTCTTTCTAGGA+AGG | 0.532385 | 5_1:+68279619 | Msa0746190:CDS |
| GATCGAATTCTGATCGTATG+TGG | 0.535765 | 5_1:+68284667 | Msa0746190:CDS |
| AGTCGATGCTCTTCACCATA+GGG | 0.541960 | 5_1:-68280085 | None:intergenic |
| TGGATATATATGGTGTGGAT+TGG | 0.542658 | 5_1:+68280043 | Msa0746190:CDS |
| CATAAGTTAAGAAGAGGGGA+AGG | 0.542713 | 5_1:+68278323 | None:intergenic |
| ATGCCATGAACTGAAGAAGA+AGG | 0.543298 | 5_1:-68278440 | None:intergenic |
| TCTGCAAAATAGGAGAAGCT+TGG | 0.545907 | 5_1:-68280418 | None:intergenic |
| TATAAGAAAGAAAGAATGAA+AGG | 0.546993 | 5_1:-68278527 | None:intergenic |
| ATATACGACAAGATGTCGTC+GGG | 0.547341 | 5_1:-68279222 | None:intergenic |
| GGGAAATCTTAAATGATGTA+GGG | 0.548239 | 5_1:+68280366 | Msa0746190:CDS |
| TTTGTCAGTTTCCATATCCA+CGG | 0.550868 | 5_1:+68284457 | Msa0746190:intron |
| ATCGTATGTGGTTTAAAAGT+GGG | 0.553312 | 5_1:+68284679 | Msa0746190:CDS |
| AGCGCCGTCGAGAGAAAGAT+GGG | 0.553518 | 5_1:-68278361 | None:intergenic |
| GAGAAAGTTTGCTGGTGTTG+GGG | 0.562287 | 5_1:-68278393 | None:intergenic |
| CCCAGCTCAAGGAAAGGATG+AGG | 0.567674 | 5_1:-68280346 | None:intergenic |
| TGTGCTTGGCAGCAGTGAGA+AGG | 0.571694 | 5_1:+68279350 | Msa0746190:CDS |
| TACCGTGGATATATATGGTG+TGG | 0.572259 | 5_1:+68280038 | Msa0746190:CDS |
| GAAAGAAAGAATGAAAGGAA+TGG | 0.576799 | 5_1:-68278522 | None:intergenic |
| GATATACGACAAGATGTCGT+CGG | 0.577491 | 5_1:-68279223 | None:intergenic |
| TAAAGTCGCAATTAAAGGGA+TGG | 0.580153 | 5_1:-68279755 | None:intergenic |
| AGGGAAATTCATGAGATACC+TGG | 0.588256 | 5_1:-68279385 | None:intergenic |
| AGAGAGTCATCAATTTAGAT+GGG | 0.590259 | 5_1:+68279439 | Msa0746190:CDS |
| GTTGAACTGGGAGGTTGCGT+TGG | 0.591594 | 5_1:+68284543 | Msa0746190:CDS |
| CTACGTTCATTGGTTTACCG+TGG | 0.595791 | 5_1:+68280023 | Msa0746190:CDS |
| CCACCTTCTAGATACTAAGA+TGG | 0.596886 | 5_1:-68279280 | None:intergenic |
| GCTTCAAGGCGAATTAGTAG+TGG | 0.601872 | 5_1:+68284722 | Msa0746190:CDS |
| ATTTCCCTATCACAAAACTC+GGG | 0.603170 | 5_1:+68279400 | Msa0746190:CDS |
| AGATTTCCCAGCTCAAGGAA+AGG | 0.605408 | 5_1:-68280352 | None:intergenic |
| GCATGTGGACATATATTCGA+CGG | 0.605548 | 5_1:+68280178 | Msa0746190:CDS |
| AGAAGGAACTACTACCAGCC+AGG | 0.609158 | 5_1:+68279367 | Msa0746190:CDS |
| TGAACTTGAGATTATGCATG+TGG | 0.623369 | 5_1:+68280163 | Msa0746190:CDS |
| ATCCACACCATATATATCCA+CGG | 0.625357 | 5_1:-68280040 | None:intergenic |
| CTTCAAGGCGAATTAGTAGT+GGG | 0.626117 | 5_1:+68284723 | Msa0746190:CDS |
| AAATTCATGAGATACCTGGC+TGG | 0.633407 | 5_1:-68279381 | None:intergenic |
| CCATCTTAGTATCTAGAAGG+TGG | 0.640967 | 5_1:+68279280 | Msa0746190:CDS |
| GTTCTGGGTCCCTATTGGGA+AGG | 0.647615 | 5_1:+68284630 | Msa0746190:CDS |
| GTCGATGCTCTTCACCATAG+GGG | 0.676683 | 5_1:-68280084 | None:intergenic |
| CCTTACTCGAGATAAAATGG+AGG | 0.698706 | 5_1:+68279182 | Msa0746190:exon |
| TGAAACATTCTCCCACAACG+AGG | 0.775786 | 5_1:+68284512 | Msa0746190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATGAATAACATTTTTT+TGG | - | chr5_1:68281105-68281124 | None:intergenic | 10.0% |
| !!! | ATGTCATAAAAAATTATTTT+AGG | - | chr5_1:68281152-68281171 | None:intergenic | 10.0% |
| !!! | ATTAATATTTGTTTTAGGTA+CGG | + | chr5_1:68278550-68278569 | Msa0746190:five_prime_UTR | 15.0% |
| !! | AAACATAGAAATAAATCAAT+AGG | - | chr5_1:68278630-68278649 | None:intergenic | 15.0% |
| !!! | TTGTTTCTATGTTATTATTA+AGG | + | chr5_1:68278728-68278747 | Msa0746190:intron | 15.0% |
| !!! | TTTTATATATTTGTATAGCT+TGG | - | chr5_1:68279051-68279070 | None:intergenic | 15.0% |
| !! | ATTCTACTTATATATATTTC+AGG | + | chr5_1:68279138-68279157 | Msa0746190:intron | 15.0% |
| !! | TAAAATTGATTGTGAATATA+TGG | - | chr5_1:68280596-68280615 | None:intergenic | 15.0% |
| !! | TAAGAAATAGGTATTTAAAT+AGG | - | chr5_1:68280784-68280803 | None:intergenic | 15.0% |
| !!! | TAAACTAGTTTATAAGAAAT+AGG | - | chr5_1:68280796-68280815 | None:intergenic | 15.0% |
| !!! | ATATTTAACATGACATTTTA+GGG | + | chr5_1:68280894-68280913 | Msa0746190:intron | 15.0% |
| !!! | CAGTAATTAAAACTTTTTTT+TGG | - | chr5_1:68281019-68281038 | None:intergenic | 15.0% |
| !! | AAAAATAAAAATAAAGAGAG+CGG | - | chr5_1:68281412-68281431 | None:intergenic | 15.0% |
| !!! | TATCAATCTATTTTATAACA+TGG | - | chr5_1:68281772-68281791 | None:intergenic | 15.0% |
| !!! | ATTTAATTTGTTTTACAGAT+TGG | - | chr5_1:68283386-68283405 | None:intergenic | 15.0% |
| !! | AACGTTATAGAATATAAAAT+AGG | + | chr5_1:68283941-68283960 | Msa0746190:intron | 15.0% |
| !!! | TTTAAGCTTTGTGTTTTTTA+GGG | - | chr5_1:68278491-68278510 | None:intergenic | 20.0% |
| !!! | ATTTAAGCTTTGTGTTTTTT+AGG | - | chr5_1:68278492-68278511 | None:intergenic | 20.0% |
| !! | TATAAGAAAGAAAGAATGAA+AGG | - | chr5_1:68278530-68278549 | None:intergenic | 20.0% |
| !! | TGGTATCCAATAATAAAAAT+CGG | + | chr5_1:68279964-68279983 | Msa0746190:CDS | 20.0% |
| !!! | CATATGTTATGCATTTTTTA+TGG | + | chr5_1:68280478-68280497 | Msa0746190:intron | 20.0% |
| !! | AAGTGCAAATTTATTTATGA+AGG | - | chr5_1:68280528-68280547 | None:intergenic | 20.0% |
| !! | AAAATAGAGTTTAATCTCAT+TGG | - | chr5_1:68280865-68280884 | None:intergenic | 20.0% |
| !!! | GATATTTAACATGACATTTT+AGG | + | chr5_1:68280893-68280912 | Msa0746190:intron | 20.0% |
| !!! | ATTAAAACTTTTTTTTGGAC+AGG | - | chr5_1:68281014-68281033 | None:intergenic | 20.0% |
| !! | ATCATTTCAAAAGTTAGATT+TGG | - | chr5_1:68281313-68281332 | None:intergenic | 20.0% |
| !! | ATAACAAAACAAGAAAGAAT+AGG | - | chr5_1:68281651-68281670 | None:intergenic | 20.0% |
| !!! | TTTTTCATAAGCTCAAAAAT+AGG | - | chr5_1:68282084-68282103 | None:intergenic | 20.0% |
| !!! | TTTTTGAGCTTATGAAAAAT+AGG | + | chr5_1:68282085-68282104 | Msa0746190:intron | 20.0% |
| !!! | AGCGTTGAAAAATAAAAATT+GGG | - | chr5_1:68282529-68282548 | None:intergenic | 20.0% |
| !!! | AAGCGTTGAAAAATAAAAAT+TGG | - | chr5_1:68282530-68282549 | None:intergenic | 20.0% |
| !! | AAAACAATATCACAACAAAT+TGG | - | chr5_1:68283092-68283111 | None:intergenic | 20.0% |
| !! | AAAGTTTAACACTTCTTATT+GGG | - | chr5_1:68283277-68283296 | None:intergenic | 20.0% |
| !!! | CTGTTTCTAAGTATTTTTTT+TGG | - | chr5_1:68283457-68283476 | None:intergenic | 20.0% |
| !! | CAAAAAAAATACTTAGAAAC+AGG | + | chr5_1:68283455-68283474 | Msa0746190:intron | 20.0% |
| !! | ACATGTGAATGATAAAAATA+AGG | + | chr5_1:68283608-68283627 | Msa0746190:intron | 20.0% |
| !! | GTGAAATTGGAATATAAAAT+AGG | + | chr5_1:68283688-68283707 | Msa0746190:intron | 20.0% |
| !!! | TTCTAATGTGATTTTTTTGT+TGG | - | chr5_1:68283851-68283870 | None:intergenic | 20.0% |
| !!! | AAAAGTTGAAATTTTAGAGT+TGG | + | chr5_1:68283876-68283895 | Msa0746190:intron | 20.0% |
| !!! | TTCTAATGTGATTTTTTTGT+TGG | - | chr5_1:68283851-68283870 | None:intergenic | 20.0% |
| !!! | AAAAAGTTGAAATTTAGAGT+TGG | + | chr5_1:68284128-68284147 | Msa0746190:intron | 20.0% |
| !! | CATAATACAATGAGTTAAAA+TGG | + | chr5_1:68284232-68284251 | Msa0746190:intron | 20.0% |
| !!! | TTTGTGTTTTTTAGGGTTTT+TGG | - | chr5_1:68278484-68278503 | None:intergenic | 25.0% |
| !! | ATCTATAGCATCTTTTTATG+AGG | + | chr5_1:68278810-68278829 | Msa0746190:intron | 25.0% |
| !! | TAGATGATATCATCATTTTC+TGG | + | chr5_1:68278835-68278854 | Msa0746190:intron | 25.0% |
| !! | TTTTAACACTTATGCTTAGT+TGG | + | chr5_1:68279008-68279027 | Msa0746190:intron | 25.0% |
| ! | TATCTTTACAACTTTATCCA+TGG | + | chr5_1:68279242-68279261 | Msa0746190:CDS | 25.0% |
| !! | AGAGATCTCAAATTTTTGAA+TGG | - | chr5_1:68279783-68279802 | None:intergenic | 25.0% |
| ! | ATCCAATAATAAAAATCGGA+TGG | + | chr5_1:68279968-68279987 | Msa0746190:CDS | 25.0% |
| !! | TTCCATCCGATTTTTATTAT+TGG | - | chr5_1:68279973-68279992 | None:intergenic | 25.0% |
| ! | AAGATCTTCATTGAATGAAA+TGG | - | chr5_1:68280114-68280133 | None:intergenic | 25.0% |
| ! | ACTAAAAGTTTCTGCAAAAT+AGG | - | chr5_1:68280431-68280450 | None:intergenic | 25.0% |
| !!! | CATTTTTTATGGTTATCGTT+TGG | + | chr5_1:68280489-68280508 | Msa0746190:intron | 25.0% |
| ! | ACTAGAGATCAAAATAGTTT+AGG | + | chr5_1:68280632-68280651 | Msa0746190:intron | 25.0% |
| ! | AATCTCCAAAAAATTAATGC+AGG | + | chr5_1:68280970-68280989 | Msa0746190:intron | 25.0% |
| !!! | ATTAGCCTGCATTAATTTTT+TGG | - | chr5_1:68280978-68280997 | None:intergenic | 25.0% |
| ! | AAATGAAATGACAATTAGTC+AGG | - | chr5_1:68281072-68281091 | None:intergenic | 25.0% |
| !!! | TAATAAGAGTAGTTCTAGTT+GGG | + | chr5_1:68281207-68281226 | Msa0746190:intron | 25.0% |
| ! | GTTAGATTTGGAAAGATAAT+GGG | - | chr5_1:68281301-68281320 | None:intergenic | 25.0% |
| ! | AGTTAGATTTGGAAAGATAA+TGG | - | chr5_1:68281302-68281321 | None:intergenic | 25.0% |
| ! | CAAAAGAGAAAATTATGCAT+GGG | - | chr5_1:68281542-68281561 | None:intergenic | 25.0% |
| ! | TCAAAAGAGAAAATTATGCA+TGG | - | chr5_1:68281543-68281562 | None:intergenic | 25.0% |
| ! | ATTTATGAAATGTCAACATG+TGG | - | chr5_1:68281743-68281762 | None:intergenic | 25.0% |
| !!! | AGAAAAGCACTAAATCTAAT+GGG | + | chr5_1:68281832-68281851 | Msa0746190:intron | 25.0% |
| ! | TACTTTCATATTGTAGTTTG+TGG | - | chr5_1:68281871-68281890 | None:intergenic | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | - | chr5_1:68282198-68282217 | None:intergenic | 25.0% |
| ! | ACTGAAAATGATTCTTCAAT+TGG | - | chr5_1:68282656-68282675 | None:intergenic | 25.0% |
| ! | AAAGATACATCTAACTACAT+GGG | + | chr5_1:68283045-68283064 | Msa0746190:intron | 25.0% |
| ! | ATTATGTAAGATTGGAACAA+AGG | + | chr5_1:68283155-68283174 | Msa0746190:intron | 25.0% |
| ! | TTATGTAAGATTGGAACAAA+GGG | + | chr5_1:68283156-68283175 | Msa0746190:intron | 25.0% |
| ! | AAGTTTAACACTTCTTATTG+GGG | - | chr5_1:68283276-68283295 | None:intergenic | 25.0% |
| ! | CAAAGTTTAACACTTCTTAT+TGG | - | chr5_1:68283278-68283297 | None:intergenic | 25.0% |
| !!! | CAATAAGAAGTGTTAAACTT+TGG | + | chr5_1:68283276-68283295 | Msa0746190:intron | 25.0% |
| !! | AAAACCTTTTATCATCTCAA+AGG | - | chr5_1:68283543-68283562 | None:intergenic | 25.0% |
| !! | ACATACACAAAACCTATTTT+TGG | - | chr5_1:68283719-68283738 | None:intergenic | 25.0% |
| ! | ATTCTATAACAAAACCATAC+CGG | - | chr5_1:68283798-68283817 | None:intergenic | 25.0% |
| !! | ACATACACAAAACCTATTTT+TGG | - | chr5_1:68283719-68283738 | None:intergenic | 25.0% |
| ! | TGTATTATGAGTGAAATTTG+TGG | - | chr5_1:68284221-68284240 | None:intergenic | 25.0% |
| !!! | ATGTTTTGATTTGCATTCAT+TGG | + | chr5_1:68284391-68284410 | Msa0746190:intron | 25.0% |
| !!! | TGTTTTGATTTGCATTCATT+GGG | + | chr5_1:68284392-68284411 | Msa0746190:intron | 25.0% |
| ! | ACAAAATTCAAATCACAACA+TGG | - | chr5_1:68284442-68284461 | None:intergenic | 25.0% |
| !! | TGATATCTTTTTGCTTTACA+AGG | - | chr5_1:68284485-68284504 | None:intergenic | 25.0% |
| ! | TTGTAAAGCAAAAAGATATC+AGG | + | chr5_1:68284484-68284503 | Msa0746190:CDS | 25.0% |
| ! | TGTAAAGCAAAAAGATATCA+GGG | + | chr5_1:68284485-68284504 | Msa0746190:CDS | 25.0% |
| !! | AACTATTAGCTCAAGTTTTT+GGG | - | chr5_1:68284613-68284632 | None:intergenic | 25.0% |
| GAAAGAAAGAATGAAAGGAA+TGG | - | chr5_1:68278525-68278544 | None:intergenic | 30.0% | |
| TTTCATATCTTCAATGTGCT+TGG | + | chr5_1:68279336-68279355 | Msa0746190:CDS | 30.0% | |
| AATTTCCCTATCACAAAACT+CGG | + | chr5_1:68279399-68279418 | Msa0746190:CDS | 30.0% | |
| TGATGACTCTCTTTATAGTA+GGG | - | chr5_1:68279431-68279450 | None:intergenic | 30.0% | |
| ! | TTGATGACTCTCTTTATAGT+AGG | - | chr5_1:68279432-68279451 | None:intergenic | 30.0% |
| AAGAGAGTCATCAATTTAGA+TGG | + | chr5_1:68279438-68279457 | Msa0746190:CDS | 30.0% | |
| AGAGAGTCATCAATTTAGAT+GGG | + | chr5_1:68279439-68279458 | Msa0746190:CDS | 30.0% | |
| TTTCATGGTGAACTTTCATT+TGG | + | chr5_1:68279530-68279549 | Msa0746190:CDS | 30.0% | |
| AAAGCAACACTATTGATCAA+TGG | + | chr5_1:68279562-68279581 | Msa0746190:CDS | 30.0% | |
| AGTATCAATCTTCTCTTTCT+AGG | + | chr5_1:68279615-68279634 | Msa0746190:CDS | 30.0% | |
| GGAATAAAGTCGCAATTAAA+GGG | - | chr5_1:68279762-68279781 | None:intergenic | 30.0% | |
| TGGAATAAAGTCGCAATTAA+AGG | - | chr5_1:68279763-68279782 | None:intergenic | 30.0% | |
| TGAGTTCAAATCATCAAAGT+TGG | + | chr5_1:68279893-68279912 | Msa0746190:CDS | 30.0% | |
| TTGTGTCATCTCAAGATTAT+AGG | + | chr5_1:68279933-68279952 | Msa0746190:CDS | 30.0% | |
| TGTGTCATCTCAAGATTATA+GGG | + | chr5_1:68279934-68279953 | Msa0746190:CDS | 30.0% | |
| ! | GGAAGTAAACTTGATTTTAC+TGG | + | chr5_1:68279989-68280008 | Msa0746190:CDS | 30.0% |
| AAACCAATGAACGTAGTTTA+AGG | - | chr5_1:68280019-68280038 | None:intergenic | 30.0% | |
| !!! | TGAATGGTTGAGTTGTTTTT+GGG | - | chr5_1:68280307-68280326 | None:intergenic | 30.0% |
| !! | TTGAATGGTTGAGTTGTTTT+TGG | - | chr5_1:68280308-68280327 | None:intergenic | 30.0% |
| ! | AACTGTCTAAGATGTTTGAA+TGG | - | chr5_1:68280323-68280342 | None:intergenic | 30.0% |
| TGGGAAATCTTAAATGATGT+AGG | + | chr5_1:68280365-68280384 | Msa0746190:CDS | 30.0% | |
| GGGAAATCTTAAATGATGTA+GGG | + | chr5_1:68280366-68280385 | Msa0746190:CDS | 30.0% | |
| ! | TTTGCAGAAACTTTTAGTCA+TGG | + | chr5_1:68280433-68280452 | Msa0746190:CDS | 30.0% |
| !!! | AATTTGCACTTTTGACTTAG+TGG | + | chr5_1:68280537-68280556 | Msa0746190:intron | 30.0% |
| !!! | ATTTGCACTTTTGACTTAGT+GGG | + | chr5_1:68280538-68280557 | Msa0746190:intron | 30.0% |
| !! | AGTTTTATAAGGCCTAATCT+TGG | + | chr5_1:68280663-68280682 | Msa0746190:intron | 30.0% |
| TTGGCATGGTCAAAAAATTT+AGG | + | chr5_1:68280682-68280701 | Msa0746190:intron | 30.0% | |
| !! | TTTAGGTTTGACCTTTTTGA+AGG | + | chr5_1:68280740-68280759 | Msa0746190:intron | 30.0% |
| GTCATATCAAACCTTCAAAA+AGG | - | chr5_1:68280754-68280773 | None:intergenic | 30.0% | |
| AGGTATTTAAATAGGCTAAG+AGG | - | chr5_1:68280776-68280795 | None:intergenic | 30.0% | |
| !! | ATCTCATTGGTTTACTAACT+TGG | - | chr5_1:68280852-68280871 | None:intergenic | 30.0% |
| ATTAAAATAGGCAGTCAAGT+AGG | + | chr5_1:68281126-68281145 | Msa0746190:intron | 30.0% | |
| TACTTGGCTAAAAAAAAGTC+AGG | - | chr5_1:68281181-68281200 | None:intergenic | 30.0% | |
| !!! | TGACTTTTTTTTAGCCAAGT+AGG | + | chr5_1:68281180-68281199 | Msa0746190:intron | 30.0% |
| !! | CTAATAAGAGTAGTTCTAGT+TGG | + | chr5_1:68281206-68281225 | Msa0746190:intron | 30.0% |
| !! | ATGATTGCTTTTCTCACATA+AGG | + | chr5_1:68281459-68281478 | Msa0746190:intron | 30.0% |
| AAATGACCAAAAAACTCCAA+CGG | - | chr5_1:68281585-68281604 | None:intergenic | 30.0% | |
| ! | TTTTAAGCAACTTCGTATGT+TGG | + | chr5_1:68281613-68281632 | Msa0746190:intron | 30.0% |
| ! | TTAGATTTAGTGCTTTTCTC+TGG | - | chr5_1:68281831-68281850 | None:intergenic | 30.0% |
| !! | GAGAAAAGCACTAAATCTAA+TGG | + | chr5_1:68281831-68281850 | Msa0746190:intron | 30.0% |
| TTAAATATGCGTTCCAACAT+GGG | - | chr5_1:68282304-68282323 | None:intergenic | 30.0% | |
| AAGTAAGATTGTAACGATCA+AGG | + | chr5_1:68282367-68282386 | Msa0746190:intron | 30.0% | |
| TGGTACTTAGGATATTGTTA+AGG | - | chr5_1:68282463-68282482 | None:intergenic | 30.0% | |
| ACATGGAAAAAATGGTACTT+AGG | - | chr5_1:68282475-68282494 | None:intergenic | 30.0% | |
| CAATAAACTCTGATACTATG+TGG | + | chr5_1:68282589-68282608 | Msa0746190:intron | 30.0% | |
| CTATGTGGAAAAATGTTTAG+AGG | + | chr5_1:68282604-68282623 | Msa0746190:intron | 30.0% | |
| !! | ATTGAATTCATTTCTGGAGT+CGG | + | chr5_1:68282698-68282717 | Msa0746190:intron | 30.0% |
| GTTATGCACCAAATAAAAGA+GGG | - | chr5_1:68283021-68283040 | None:intergenic | 30.0% | |
| GTAGTTAGATGTATCTTTCT+AGG | - | chr5_1:68283043-68283062 | None:intergenic | 30.0% | |
| GAAAGATACATCTAACTACA+TGG | + | chr5_1:68283044-68283063 | Msa0746190:intron | 30.0% | |
| AAGATACATCTAACTACATG+GGG | + | chr5_1:68283046-68283065 | Msa0746190:intron | 30.0% | |
| TGAGACCCGATTAATAATAT+AGG | + | chr5_1:68283230-68283249 | Msa0746190:intron | 30.0% | |
| !! | AGGAGACATATAGTCATTTT+AGG | - | chr5_1:68283329-68283348 | None:intergenic | 30.0% |
| TTAGTCTCGGAAAAAAAAAG+AGG | + | chr5_1:68283359-68283378 | Msa0746190:intron | 30.0% | |
| TTCTATAACAAAACCATACC+GGG | - | chr5_1:68283797-68283816 | None:intergenic | 30.0% | |
| ! | AACAATTTTTACCTCGTTGT+GGG | - | chr5_1:68284526-68284545 | None:intergenic | 30.0% |
| GAGGTAAAAATTGTTGAACT+GGG | + | chr5_1:68284531-68284550 | Msa0746190:CDS | 30.0% | |
| ! | GAACTATTAGCTCAAGTTTT+TGG | - | chr5_1:68284614-68284633 | None:intergenic | 30.0% |
| AAAACTTGAGCTAATAGTTC+TGG | + | chr5_1:68284614-68284633 | Msa0746190:CDS | 30.0% | |
| AAACTTGAGCTAATAGTTCT+GGG | + | chr5_1:68284615-68284634 | Msa0746190:CDS | 30.0% | |
| ATCGTATGTGGTTTAAAAGT+GGG | + | chr5_1:68284679-68284698 | Msa0746190:CDS | 30.0% | |
| AGGATTAACAAAAAGCTTCA+AGG | + | chr5_1:68284708-68284727 | Msa0746190:CDS | 30.0% | |
| AGAAAGATGGGAGTGAATTT+GGG | - | chr5_1:68278352-68278371 | None:intergenic | 35.0% | |
| CTAAAAACGAATTCCAGCAA+CGG | - | chr5_1:68278774-68278793 | None:intergenic | 35.0% | |
| GTGATATTTATATGCTTGCG+TGG | + | chr5_1:68278980-68278999 | Msa0746190:intron | 35.0% | |
| GCTAAAGCTATACAGAGTTA+CGG | + | chr5_1:68279107-68279126 | Msa0746190:intron | 35.0% | |
| GAACCTTACTCGAGATAAAA+TGG | + | chr5_1:68279179-68279198 | Msa0746190:exon | 35.0% | |
| AAGCCATCTTAGTATCTAGA+AGG | + | chr5_1:68279277-68279296 | Msa0746190:CDS | 35.0% | |
| ATTTCCCTATCACAAAACTC+GGG | + | chr5_1:68279400-68279419 | Msa0746190:CDS | 35.0% | |
| ! | TCAGTTCGTCAAGAATTTTC+AGG | + | chr5_1:68279491-68279510 | Msa0746190:CDS | 35.0% |
| ! | CAGTTCGTCAAGAATTTTCA+GGG | + | chr5_1:68279492-68279511 | Msa0746190:CDS | 35.0% |
| !! | GGATACTTTTTGCAATTGCA+AGG | + | chr5_1:68279583-68279602 | Msa0746190:CDS | 35.0% |
| ! | TCAATCTTCTCTTTCTAGGA+AGG | + | chr5_1:68279619-68279638 | Msa0746190:CDS | 35.0% |
| CTTCATCTCTAAACCATCTT+CGG | + | chr5_1:68279712-68279731 | Msa0746190:CDS | 35.0% | |
| TAAAGTCGCAATTAAAGGGA+TGG | - | chr5_1:68279758-68279777 | None:intergenic | 35.0% | |
| ATCGCTTGAAGAAGTAGAAT+TGG | + | chr5_1:68279803-68279822 | Msa0746190:CDS | 35.0% | |
| ! | CAAGATTATAGGGTGCTATA+TGG | + | chr5_1:68279944-68279963 | Msa0746190:CDS | 35.0% |
| TTGCCTTAAACTACGTTCAT+TGG | + | chr5_1:68280013-68280032 | Msa0746190:CDS | 35.0% | |
| TGGTTTACCGTGGATATATA+TGG | + | chr5_1:68280033-68280052 | Msa0746190:CDS | 35.0% | |
| ATCCACACCATATATATCCA+CGG | - | chr5_1:68280043-68280062 | None:intergenic | 35.0% | |
| TGGATATATATGGTGTGGAT+TGG | + | chr5_1:68280043-68280062 | Msa0746190:CDS | 35.0% | |
| ACATGCATAATCTCAAGTTC+AGG | - | chr5_1:68280164-68280183 | None:intergenic | 35.0% | |
| TGAACTTGAGATTATGCATG+TGG | + | chr5_1:68280163-68280182 | Msa0746190:CDS | 35.0% | |
| !!! | GAATGGTTGAGTTGTTTTTG+GGG | - | chr5_1:68280306-68280325 | None:intergenic | 35.0% |
| ! | ATTTAAGATTTCCCAGCTCA+AGG | - | chr5_1:68280360-68280379 | None:intergenic | 35.0% |
| ! | ATGTAGGGTATGATCTTTTG+TGG | + | chr5_1:68280381-68280400 | Msa0746190:CDS | 35.0% |
| !! | AGGCCAAGCTAAGTTTTATA+AGG | + | chr5_1:68280652-68280671 | Msa0746190:intron | 35.0% |
| ! | AGGCCTTATAAAACTTAGCT+TGG | - | chr5_1:68280658-68280677 | None:intergenic | 35.0% |
| ! | TTTTTGACCATGCCAAGATT+AGG | - | chr5_1:68280678-68280697 | None:intergenic | 35.0% |
| !! | CACGTCATAGGCTTATTTTT+AGG | + | chr5_1:68280723-68280742 | Msa0746190:intron | 35.0% |
| ACTCTTATTAGAAGCCTACT+TGG | - | chr5_1:68281197-68281216 | None:intergenic | 35.0% | |
| !! | AGATTTGGAAAGATAATGGG+TGG | - | chr5_1:68281298-68281317 | None:intergenic | 35.0% |
| !!! | CTTTTGAAATGATTCCTACG+CGG | + | chr5_1:68281320-68281339 | Msa0746190:intron | 35.0% |
| AAAATAAAGAGAGCGGACAT+AGG | - | chr5_1:68281405-68281424 | None:intergenic | 35.0% | |
| GCAATCATCAAAGAATAGAC+AGG | - | chr5_1:68281447-68281466 | None:intergenic | 35.0% | |
| !!! | TAACTACCGTTGGAGTTTTT+TGG | + | chr5_1:68281576-68281595 | Msa0746190:intron | 35.0% |
| CGAAGTTGCTTAAAAACACA+TGG | - | chr5_1:68281608-68281627 | None:intergenic | 35.0% | |
| !! | ATCTAATGGGCTTGCTTAAT+AGG | + | chr5_1:68281845-68281864 | Msa0746190:intron | 35.0% |
| ATATTCATTCGTCAGCTTGA+GGG | - | chr5_1:68281936-68281955 | None:intergenic | 35.0% | |
| ATCTCCATATACACCTCTAA+CGG | + | chr5_1:68282044-68282063 | Msa0746190:intron | 35.0% | |
| GTTAAATATGCGTTCCAACA+TGG | - | chr5_1:68282305-68282324 | None:intergenic | 35.0% | |
| CAGATGAATCTATCTAGACA+GGG | - | chr5_1:68282414-68282433 | None:intergenic | 35.0% | |
| ! | ATGAGAGCACATGGAAAAAA+TGG | - | chr5_1:68282483-68282502 | None:intergenic | 35.0% |
| TAAAAATTGGGTCCAAGCTA+TGG | - | chr5_1:68282517-68282536 | None:intergenic | 35.0% | |
| AACGCTTGTTCAATAGATGA+TGG | + | chr5_1:68282543-68282562 | Msa0746190:intron | 35.0% | |
| ACGCTTGTTCAATAGATGAT+GGG | + | chr5_1:68282544-68282563 | Msa0746190:intron | 35.0% | |
| GACACGATTGAATTCATTTC+TGG | + | chr5_1:68282692-68282711 | Msa0746190:intron | 35.0% | |
| CTATGAACAATTGTAGACTC+AGG | + | chr5_1:68282784-68282803 | Msa0746190:intron | 35.0% | |
| !! | ACTTTTGAGTCATTTTCGAC+TGG | + | chr5_1:68282976-68282995 | Msa0746190:intron | 35.0% |
| !! | CTTTTGAGTCATTTTCGACT+GGG | + | chr5_1:68282977-68282996 | Msa0746190:intron | 35.0% |
| ! | CATCTGTACCCTCTTTTATT+TGG | + | chr5_1:68283010-68283029 | Msa0746190:intron | 35.0% |
| GGTTATGCACCAAATAAAAG+AGG | - | chr5_1:68283022-68283041 | None:intergenic | 35.0% | |
| ! | TAATCTCGAGTCTTGTGTAT+TGG | - | chr5_1:68283139-68283158 | None:intergenic | 35.0% |
| GACTCGAGATTATGTAAGAT+TGG | + | chr5_1:68283147-68283166 | Msa0746190:intron | 35.0% | |
| CGCTGCCTATATTATTAATC+GGG | - | chr5_1:68283238-68283257 | None:intergenic | 35.0% | |
| CCGCTGCCTATATTATTAAT+CGG | - | chr5_1:68283239-68283258 | None:intergenic | 35.0% | |
| CCGATTAATAATATAGGCAG+CGG | + | chr5_1:68283236-68283255 | Msa0746190:intron | 35.0% | |
| AAACAGGAGAATGCTAACAA+AGG | + | chr5_1:68283471-68283490 | Msa0746190:intron | 35.0% | |
| AACAGGAGAATGCTAACAAA+GGG | + | chr5_1:68283472-68283491 | Msa0746190:intron | 35.0% | |
| TTTATCATCTCAAAGGAACG+CGG | - | chr5_1:68283536-68283555 | None:intergenic | 35.0% | |
| !! | CGTTCCTTTGAGATGATAAA+AGG | + | chr5_1:68283536-68283555 | Msa0746190:intron | 35.0% |
| AAATAGGCTGCACCAAAAAT+AGG | + | chr5_1:68283704-68283723 | Msa0746190:intron | 35.0% | |
| TGTACGTACGTACATACATA+CGG | + | chr5_1:68283736-68283755 | Msa0746190:intron | 35.0% | |
| AAATAGGCTGCACCAAAAAT+AGG | + | chr5_1:68283704-68283723 | Msa0746190:intron | 35.0% | |
| TGTACGTACGTACATACATA+CGG | + | chr5_1:68283736-68283755 | Msa0746190:intron | 35.0% | |
| ATGCCTATATTGCATAGGTA+CGG | + | chr5_1:68284016-68284035 | Msa0746190:intron | 35.0% | |
| AAGCATGGGTACTTGTAAAA+CGG | - | chr5_1:68284317-68284336 | None:intergenic | 35.0% | |
| TTTGTCAGTTTCCATATCCA+CGG | + | chr5_1:68284457-68284476 | Msa0746190:intron | 35.0% | |
| ! | CAACAATTTTTACCTCGTTG+TGG | - | chr5_1:68284527-68284546 | None:intergenic | 35.0% |
| CGAGGTAAAAATTGTTGAAC+TGG | + | chr5_1:68284530-68284549 | Msa0746190:CDS | 35.0% | |
| GTAAAAATTGTTGAACTGGG+AGG | + | chr5_1:68284534-68284553 | Msa0746190:CDS | 35.0% | |
| GATCGTATGTGGTTTAAAAG+TGG | + | chr5_1:68284678-68284697 | Msa0746190:CDS | 35.0% | |
| GAGAAAGATGGGAGTGAATT+TGG | - | chr5_1:68278353-68278372 | None:intergenic | 40.0% | |
| !! | TGAGAAAGTTTGCTGGTGTT+GGG | - | chr5_1:68278397-68278416 | None:intergenic | 40.0% |
| AGGAAAGTGAGAAAGTTTGC+TGG | - | chr5_1:68278404-68278423 | None:intergenic | 40.0% | |
| GATCCTTCTTCTTCAGTTCA+TGG | + | chr5_1:68278437-68278456 | Msa0746190:five_prime_UTR | 40.0% | |
| ATGCCATGAACTGAAGAAGA+AGG | - | chr5_1:68278443-68278462 | None:intergenic | 40.0% | |
| TCCATAAACTGCGTAGTTGA+AGG | + | chr5_1:68278576-68278595 | Msa0746190:five_prime_UTR | 40.0% | |
| GTAGTTGAAGGCTGTTGAAA+AGG | + | chr5_1:68278588-68278607 | Msa0746190:five_prime_UTR | 40.0% | |
| ! | GATATTTCTATCACCGTTGC+TGG | + | chr5_1:68278758-68278777 | Msa0746190:intron | 40.0% |
| ! | CCTCCATTTTATCTCGAGTA+AGG | - | chr5_1:68279185-68279204 | None:intergenic | 40.0% |
| CCTTACTCGAGATAAAATGG+AGG | + | chr5_1:68279182-68279201 | Msa0746190:exon | 40.0% | |
| ATATACGACAAGATGTCGTC+GGG | - | chr5_1:68279225-68279244 | None:intergenic | 40.0% | |
| GATATACGACAAGATGTCGT+CGG | - | chr5_1:68279226-68279245 | None:intergenic | 40.0% | |
| CCACCTTCTAGATACTAAGA+TGG | - | chr5_1:68279283-68279302 | None:intergenic | 40.0% | |
| CCATCTTAGTATCTAGAAGG+TGG | + | chr5_1:68279280-68279299 | Msa0746190:CDS | 40.0% | |
| AAATTCATGAGATACCTGGC+TGG | - | chr5_1:68279384-68279403 | None:intergenic | 40.0% | |
| AGGGAAATTCATGAGATACC+TGG | - | chr5_1:68279388-68279407 | None:intergenic | 40.0% | |
| !! | GAAACCCGAGTTTTGTGATA+GGG | - | chr5_1:68279407-68279426 | None:intergenic | 40.0% |
| !! | AGAAACCCGAGTTTTGTGAT+AGG | - | chr5_1:68279408-68279427 | None:intergenic | 40.0% |
| !! | CACAATCGTCGATTCTTTCA+TGG | + | chr5_1:68279515-68279534 | Msa0746190:CDS | 40.0% |
| !! | GACAATTTTCAAGCCGAAGA+TGG | - | chr5_1:68279728-68279747 | None:intergenic | 40.0% |
| TACCGTGGATATATATGGTG+TGG | + | chr5_1:68280038-68280057 | Msa0746190:CDS | 40.0% | |
| CGTGAACATTAATACCCCTA+TGG | + | chr5_1:68280070-68280089 | Msa0746190:CDS | 40.0% | |
| GCATGTGGACATATATTCGA+CGG | + | chr5_1:68280178-68280197 | Msa0746190:CDS | 40.0% | |
| !! | GAGTCATACAAGTCTTGTTC+AGG | + | chr5_1:68280274-68280293 | Msa0746190:intron | 40.0% |
| TCTGCAAAATAGGAGAAGCT+TGG | - | chr5_1:68280421-68280440 | None:intergenic | 40.0% | |
| TTAGTCATGGTGAGTGAACA+AGG | + | chr5_1:68280446-68280465 | Msa0746190:intron | 40.0% | |
| TATAAGGCCTAATCTTGGCA+TGG | + | chr5_1:68280668-68280687 | Msa0746190:intron | 40.0% | |
| ! | TGGACTATTTTCACCTCCAT+TGG | + | chr5_1:68281268-68281287 | Msa0746190:intron | 40.0% |
| TCATCAAAGAATAGACAGGC+AGG | - | chr5_1:68281443-68281462 | None:intergenic | 40.0% | |
| ! | AATGACGCTTTTAACCCCAA+CGG | + | chr5_1:68281502-68281521 | Msa0746190:intron | 40.0% |
| ACAATAGTTAACTGCCGTTG+GGG | - | chr5_1:68281519-68281538 | None:intergenic | 40.0% | |
| GACAATAGTTAACTGCCGTT+GGG | - | chr5_1:68281520-68281539 | None:intergenic | 40.0% | |
| TATTCATTCGTCAGCTTGAG+GGG | - | chr5_1:68281935-68281954 | None:intergenic | 40.0% | |
| GATATTCATTCGTCAGCTTG+AGG | - | chr5_1:68281937-68281956 | None:intergenic | 40.0% | |
| ! | CGATCATTCCTAACTTGCAA+AGG | + | chr5_1:68281956-68281975 | Msa0746190:intron | 40.0% |
| ! | TTCCTAACTTGCAAAGGTCA+TGG | + | chr5_1:68281962-68281981 | Msa0746190:intron | 40.0% |
| ! | CTCTTGTTGCTTACTCTTGA+TGG | - | chr5_1:68282346-68282365 | None:intergenic | 40.0% |
| GCAGATGAATCTATCTAGAC+AGG | - | chr5_1:68282415-68282434 | None:intergenic | 40.0% | |
| CAAAGAGACAAGAAGTCAGT+TGG | - | chr5_1:68282440-68282459 | None:intergenic | 40.0% | |
| TTTCCTCATCATCCATAGCT+TGG | + | chr5_1:68282502-68282521 | Msa0746190:intron | 40.0% | |
| TTTGCAAGAATCAACACCCT+CGG | - | chr5_1:68282747-68282766 | None:intergenic | 40.0% | |
| TTCTTGCAAACCGAAGACAT+TGG | + | chr5_1:68282757-68282776 | Msa0746190:intron | 40.0% | |
| TCATAGTCCTCCAATGTCTT+CGG | - | chr5_1:68282770-68282789 | None:intergenic | 40.0% | |
| ACAATTGTAGACTCAGGTTC+AGG | + | chr5_1:68282790-68282809 | Msa0746190:intron | 40.0% | |
| !! | AACTAGGACTGACTCGAAAT+AGG | + | chr5_1:68282818-68282837 | Msa0746190:intron | 40.0% |
| GAACATGGATGAATGCTCTA+GGG | + | chr5_1:68282864-68282883 | Msa0746190:intron | 40.0% | |
| AGGACCAAGGATCAGAAAAT+CGG | + | chr5_1:68282892-68282911 | Msa0746190:intron | 40.0% | |
| !! | ATGGGGATCCAATTTGTTGT+GGG | + | chr5_1:68283063-68283082 | Msa0746190:intron | 40.0% |
| ATTGGATCCCCACAACAAAT+TGG | - | chr5_1:68283074-68283093 | None:intergenic | 40.0% | |
| TAACACTTCTTATTGGGGTG+AGG | - | chr5_1:68283271-68283290 | None:intergenic | 40.0% | |
| !! | AAAGAGCGCTATAGAACTGT+CGG | - | chr5_1:68283576-68283595 | None:intergenic | 40.0% |
| ! | GTTGCATGTTACTTGATGCA+TGG | + | chr5_1:68283656-68283675 | Msa0746190:intron | 40.0% |
| TACTTGATGCATGGAAGTTG+AGG | + | chr5_1:68283665-68283684 | Msa0746190:intron | 40.0% | |
| ACTTGATGCATGGAAGTTGA+GGG | + | chr5_1:68283666-68283685 | Msa0746190:intron | 40.0% | |
| ATGGAAGTTGAGGGTGAAAT+TGG | + | chr5_1:68283675-68283694 | Msa0746190:intron | 40.0% | |
| ATGCCTATGTTGCATAGGTA+CGG | + | chr5_1:68283763-68283782 | Msa0746190:intron | 40.0% | |
| GATGCATGCCTATATTGCAT+AGG | + | chr5_1:68284011-68284030 | Msa0746190:intron | 40.0% | |
| TGCCTATATTGCATAGGTAC+GGG | + | chr5_1:68284017-68284036 | Msa0746190:intron | 40.0% | |
| TACCCGTACCTATGCAATAT+AGG | - | chr5_1:68284022-68284041 | None:intergenic | 40.0% | |
| ATATTGCATAGGTACGGGTA+CGG | + | chr5_1:68284022-68284041 | Msa0746190:intron | 40.0% | |
| ! | TGCATGCATATCTGAAGCAT+GGG | - | chr5_1:68284331-68284350 | None:intergenic | 40.0% |
| ! | ATGCATGCATATCTGAAGCA+TGG | - | chr5_1:68284332-68284351 | None:intergenic | 40.0% |
| TTTACAAGGAACCGTGGATA+TGG | - | chr5_1:68284471-68284490 | None:intergenic | 40.0% | |
| ! | TTTTGCTTTACAAGGAACCG+TGG | - | chr5_1:68284477-68284496 | None:intergenic | 40.0% |
| !! | TAATAGTTCTGGGTCCCTAT+TGG | + | chr5_1:68284625-68284644 | Msa0746190:CDS | 40.0% |
| !! | AATAGTTCTGGGTCCCTATT+GGG | + | chr5_1:68284626-68284645 | Msa0746190:CDS | 40.0% |
| GAGTCATTTCCTTCCCAATA+GGG | - | chr5_1:68284642-68284661 | None:intergenic | 40.0% | |
| TGAGTCATTTCCTTCCCAAT+AGG | - | chr5_1:68284643-68284662 | None:intergenic | 40.0% | |
| TTGGGAAGGAAATGACTCAT+TGG | + | chr5_1:68284644-68284663 | Msa0746190:CDS | 40.0% | |
| TGGGAAGGAAATGACTCATT+GGG | + | chr5_1:68284645-68284664 | Msa0746190:CDS | 40.0% | |
| GATCGAATTCTGATCGTATG+TGG | + | chr5_1:68284667-68284686 | Msa0746190:CDS | 40.0% | |
| CTTCAAGGCGAATTAGTAGT+GGG | + | chr5_1:68284723-68284742 | Msa0746190:CDS | 40.0% | |
| ! | GCAGCATTTTCATAACTCGT+TGG | + | chr5_1:68284818-68284837 | Msa0746190:three_prime_UTR | 40.0% |
| !! | GAGAAAGTTTGCTGGTGTTG+GGG | - | chr5_1:68278396-68278415 | None:intergenic | 45.0% |
| !! | GTGAGAAAGTTTGCTGGTGT+TGG | - | chr5_1:68278398-68278417 | None:intergenic | 45.0% |
| AAGGATCGTCGTAGAGAGAT+AGG | - | chr5_1:68278424-68278443 | None:intergenic | 45.0% | |
| GCCTTCAACTACGCAGTTTA+TGG | - | chr5_1:68278580-68278599 | None:intergenic | 45.0% | |
| GGCTTTCGACAAATCTTCCA+TGG | - | chr5_1:68279262-68279281 | None:intergenic | 45.0% | |
| !! | CTACGTTCATTGGTTTACCG+TGG | + | chr5_1:68280023-68280042 | Msa0746190:CDS | 45.0% |
| AGTCGATGCTCTTCACCATA+GGG | - | chr5_1:68280088-68280107 | None:intergenic | 45.0% | |
| AAGTCGATGCTCTTCACCAT+AGG | - | chr5_1:68280089-68280108 | None:intergenic | 45.0% | |
| ! | GACGGTTAGTCATAAAGTGC+TGG | + | chr5_1:68280196-68280215 | Msa0746190:intron | 45.0% |
| AGATTTCCCAGCTCAAGGAA+AGG | - | chr5_1:68280355-68280374 | None:intergenic | 45.0% | |
| GCAAAATAGGAGAAGCTTGG+AGG | - | chr5_1:68280418-68280437 | None:intergenic | 45.0% | |
| TTTGACCTGTAGCACGTCAT+AGG | + | chr5_1:68280711-68280730 | Msa0746190:intron | 45.0% | |
| ATAAGCCTATGACGTGCTAC+AGG | - | chr5_1:68280719-68280738 | None:intergenic | 45.0% | |
| ! | GTTCTAGTTGGGTTTCACGT+AGG | + | chr5_1:68281218-68281237 | Msa0746190:intron | 45.0% |
| AGTTGGGTTTCACGTAGGTT+AGG | + | chr5_1:68281223-68281242 | Msa0746190:intron | 45.0% | |
| TTTCACGTAGGTTAGGTCGT+AGG | + | chr5_1:68281230-68281249 | Msa0746190:intron | 45.0% | |
| AAATAGTCCAGCCGATCGAT+AGG | - | chr5_1:68281258-68281277 | None:intergenic | 45.0% | |
| !! | GATAATGGGTGGATGACCAA+TGG | - | chr5_1:68281287-68281306 | None:intergenic | 45.0% |
| GGACAATAGTTAACTGCCGT+TGG | - | chr5_1:68281521-68281540 | None:intergenic | 45.0% | |
| CAACGGTAGTTAACTACAGC+TGG | - | chr5_1:68281568-68281587 | None:intergenic | 45.0% | |
| CAGCTGTAGTTAACTACCGT+TGG | + | chr5_1:68281566-68281585 | Msa0746190:intron | 45.0% | |
| CACCATGACCTTTGCAAGTT+AGG | - | chr5_1:68281967-68281986 | None:intergenic | 45.0% | |
| TCCACCTGTGAGACTAAAGT+CGG | + | chr5_1:68282016-68282035 | Msa0746190:intron | 45.0% | |
| ! | CAGACCGTTAGAGGTGTATA+TGG | - | chr5_1:68282051-68282070 | None:intergenic | 45.0% |
| TACACCTCTAACGGTCTGTT+TGG | + | chr5_1:68282053-68282072 | Msa0746190:intron | 45.0% | |
| CAATCCAAACAGACCGTTAG+AGG | - | chr5_1:68282060-68282079 | None:intergenic | 45.0% | |
| ! | GATGAGGAAATGAGAGCACA+TGG | - | chr5_1:68282492-68282511 | None:intergenic | 45.0% |
| GGTCGTTGATACATTGGAGT+TGG | + | chr5_1:68282719-68282738 | Msa0746190:intron | 45.0% | |
| TTGCAAACCGAAGACATTGG+AGG | + | chr5_1:68282760-68282779 | Msa0746190:intron | 45.0% | |
| !! | TCAGGTTCAGGTGTTGAACT+AGG | + | chr5_1:68282802-68282821 | Msa0746190:intron | 45.0% |
| GGAACATGGATGAATGCTCT+AGG | + | chr5_1:68282863-68282882 | Msa0746190:intron | 45.0% | |
| !! | ATGAATGCTCTAGGGATGCT+AGG | + | chr5_1:68282872-68282891 | Msa0746190:intron | 45.0% |
| ! | GAGTCCGATTTTCTGATCCT+TGG | - | chr5_1:68282899-68282918 | None:intergenic | 45.0% |
| CAGAAAATCGGACTCAGACT+TGG | + | chr5_1:68282904-68282923 | Msa0746190:intron | 45.0% | |
| !! | CATGGGGATCCAATTTGTTG+TGG | + | chr5_1:68283062-68283081 | Msa0746190:intron | 45.0% |
| !! | TGGGGATCCAATTTGTTGTG+GGG | + | chr5_1:68283064-68283083 | Msa0746190:intron | 45.0% |
| ! | CCTTCACGACATGTTAGTCT+CGG | + | chr5_1:68283346-68283365 | Msa0746190:intron | 45.0% |
| GGAGAATGCTAACAAAGGGT+AGG | + | chr5_1:68283476-68283495 | Msa0746190:intron | 45.0% | |
| GAACATGGGATAGAGAGTGA+AGG | - | chr5_1:68283514-68283533 | None:intergenic | 45.0% | |
| GATGCATGCCTATGTTGCAT+AGG | + | chr5_1:68283758-68283777 | Msa0746190:intron | 45.0% | |
| TGCCTATGTTGCATAGGTAC+GGG | + | chr5_1:68283764-68283783 | Msa0746190:intron | 45.0% | |
| TACCCGTACCTATGCAACAT+AGG | - | chr5_1:68283769-68283788 | None:intergenic | 45.0% | |
| ATGTTGCATAGGTACGGGTA+CGG | + | chr5_1:68283769-68283788 | Msa0746190:intron | 45.0% | |
| ! | AAACGGTGAAGTACCAGTAC+CGG | - | chr5_1:68284300-68284319 | None:intergenic | 45.0% |
| TGAAACATTCTCCCACAACG+AGG | + | chr5_1:68284512-68284531 | Msa0746190:CDS | 45.0% | |
| GGTTTAAAAGTGGGCGTGAA+AGG | + | chr5_1:68284688-68284707 | Msa0746190:CDS | 45.0% | |
| GCTTCAAGGCGAATTAGTAG+TGG | + | chr5_1:68284722-68284741 | Msa0746190:CDS | 45.0% | |
| !!! | TTATAATTAATATTTGTTTT+AGG | + | chr5_1:68278545-68278564 | Msa0746190:five_prime_UTR | 5.0% |
| !!! | TATTCATATTTTATTAAAAT+AGG | + | chr5_1:68281114-68281133 | Msa0746190:intron | 5.0% |
| CACTCCCATCTTTCTCTCGA+CGG | + | chr5_1:68278357-68278376 | Msa0746190:five_prime_UTR | 50.0% | |
| GGTGCAAGCTTTCTGCTCTA+AGG | + | chr5_1:68279301-68279320 | Msa0746190:CDS | 50.0% | |
| AGAAGGAACTACTACCAGCC+AGG | + | chr5_1:68279367-68279386 | Msa0746190:CDS | 50.0% | |
| GTCGATGCTCTTCACCATAG+GGG | - | chr5_1:68280087-68280106 | None:intergenic | 50.0% | |
| ACCTCATCCTTTCCTTGAGC+TGG | + | chr5_1:68280345-68280364 | Msa0746190:CDS | 50.0% | |
| CCTCATCCTTTCCTTGAGCT+GGG | + | chr5_1:68280346-68280365 | Msa0746190:CDS | 50.0% | |
| AATGGGTGGATGACCAATGG+AGG | - | chr5_1:68281284-68281303 | None:intergenic | 50.0% | |
| TGCAAAGGTCATGGTGTGCT+TGG | + | chr5_1:68281971-68281990 | Msa0746190:intron | 50.0% | |
| GCAAAGGTCATGGTGTGCTT+GGG | + | chr5_1:68281972-68281991 | Msa0746190:intron | 50.0% | |
| TCTCACAGGTGGAACCAACA+AGG | - | chr5_1:68282009-68282028 | None:intergenic | 50.0% | |
| CCACCTGTGAGACTAAAGTC+GGG | + | chr5_1:68282017-68282036 | Msa0746190:intron | 50.0% | |
| CATGGGAACATGGGGACTTA+GGG | - | chr5_1:68282287-68282306 | None:intergenic | 50.0% | |
| ACATGGGAACATGGGGACTT+AGG | - | chr5_1:68282288-68282307 | None:intergenic | 50.0% | |
| AAGTCCCCATGTTCCCATGT+TGG | + | chr5_1:68282288-68282307 | Msa0746190:intron | 50.0% | |
| CGTTCCAACATGGGAACATG+GGG | - | chr5_1:68282295-68282314 | None:intergenic | 50.0% | |
| GCGTTCCAACATGGGAACAT+GGG | - | chr5_1:68282296-68282315 | None:intergenic | 50.0% | |
| TGCGTTCCAACATGGGAACA+TGG | - | chr5_1:68282297-68282316 | None:intergenic | 50.0% | |
| GGTCCAAGCTATGGATGATG+AGG | - | chr5_1:68282508-68282527 | None:intergenic | 50.0% | |
| GGAGTCGGTCGTTGATACAT+TGG | + | chr5_1:68282713-68282732 | Msa0746190:intron | 50.0% | |
| !! | ATACATTGGAGTTGGTGCCG+AGG | + | chr5_1:68282727-68282746 | Msa0746190:intron | 50.0% |
| !! | TACATTGGAGTTGGTGCCGA+GGG | + | chr5_1:68282728-68282747 | Msa0746190:intron | 50.0% |
| CTCGAAATAGGCGACAACTC+AGG | + | chr5_1:68282830-68282849 | Msa0746190:intron | 50.0% | |
| ATAGGCGACAACTCAGGTTC+AGG | + | chr5_1:68282836-68282855 | Msa0746190:intron | 50.0% | |
| GACAACTCAGGTTCAGGAGT+GGG | + | chr5_1:68282842-68282861 | Msa0746190:intron | 50.0% | |
| CCGAGACTAACATGTCGTGA+AGG | - | chr5_1:68283349-68283368 | None:intergenic | 50.0% | |
| ATAGAGAGTGAAGGCGATGG+TGG | - | chr5_1:68283505-68283524 | None:intergenic | 50.0% | |
| CTCAAAGGAACGCGGAACAT+GGG | - | chr5_1:68283528-68283547 | None:intergenic | 50.0% | |
| TCTCAAAGGAACGCGGAACA+TGG | - | chr5_1:68283529-68283548 | None:intergenic | 50.0% | |
| ! | AACGGTGAAGTACCAGTACC+GGG | - | chr5_1:68284299-68284318 | None:intergenic | 50.0% |
| AGCGCCGTCGAGAGAAAGAT+GGG | - | chr5_1:68278364-68278383 | None:intergenic | 55.0% | |
| TGTGCTTGGCAGCAGTGAGA+AGG | + | chr5_1:68279350-68279369 | Msa0746190:CDS | 55.0% | |
| CCCAGCTCAAGGAAAGGATG+AGG | - | chr5_1:68280349-68280368 | None:intergenic | 55.0% | |
| GGTCGTAGGCTCCTATCGAT+CGG | + | chr5_1:68281244-68281263 | Msa0746190:intron | 55.0% | |
| TACAAGTTGCGACTCCGCGT+AGG | - | chr5_1:68281337-68281356 | None:intergenic | 55.0% | |
| GGGCAAACGACACACCTTGT+TGG | + | chr5_1:68281992-68282011 | Msa0746190:intron | 55.0% | |
| CCCGACTTTAGTCTCACAGG+TGG | - | chr5_1:68282020-68282039 | None:intergenic | 55.0% | |
| TCGCCCGACTTTAGTCTCAC+AGG | - | chr5_1:68282023-68282042 | None:intergenic | 55.0% | |
| CGACAACTCAGGTTCAGGAG+TGG | + | chr5_1:68282841-68282860 | Msa0746190:intron | 55.0% | |
| CAGGTTCAGGAGTGGGAACA+TGG | + | chr5_1:68282849-68282868 | Msa0746190:intron | 55.0% | |
| ! | CTCTAGGGATGCTAGGACCA+AGG | + | chr5_1:68282879-68282898 | Msa0746190:intron | 55.0% |
| CGGGTCTCATCTCGAGTGTT+AGG | - | chr5_1:68283219-68283238 | None:intergenic | 55.0% | |
| GGGATAGAGAGTGAAGGCGA+TGG | - | chr5_1:68283508-68283527 | None:intergenic | 55.0% | |
| ATAGGTACGGGTACGGTACC+CGG | + | chr5_1:68283776-68283795 | Msa0746190:intron | 55.0% | |
| ATAGGTACGGGTACGGTACG+CGG | + | chr5_1:68284029-68284048 | Msa0746190:intron | 55.0% | |
| ! | ACGAGTATCGTACGCGTACC+CGG | + | chr5_1:68284261-68284280 | Msa0746190:intron | 55.0% |
| TATCGTACGCGTACCCGGTA+TGG | + | chr5_1:68284266-68284285 | Msa0746190:intron | 55.0% | |
| ATCGTACGCGTACCCGGTAT+GGG | + | chr5_1:68284267-68284286 | Msa0746190:intron | 55.0% | |
| TACCGGGTACACACCCATAC+CGG | - | chr5_1:68284283-68284302 | None:intergenic | 55.0% | |
| TATGGGTGTGTACCCGGTAC+TGG | + | chr5_1:68284284-68284303 | Msa0746190:intron | 55.0% | |
| GTTGAACTGGGAGGTTGCGT+TGG | + | chr5_1:68284543-68284562 | Msa0746190:CDS | 55.0% | |
| ! | TGGGAGGTTGCGTTGGCAAT+TGG | + | chr5_1:68284550-68284569 | Msa0746190:CDS | 55.0% |
| ! | GTTCTGGGTCCCTATTGGGA+AGG | + | chr5_1:68284630-68284649 | Msa0746190:CDS | 55.0% |
| CAGCGCCGTCGAGAGAAAGA+TGG | - | chr5_1:68278365-68278384 | None:intergenic | 60.0% | |
| GTAGGCTCCTATCGATCGGC+TGG | + | chr5_1:68281248-68281267 | Msa0746190:intron | 60.0% | |
| TACGGGTACGGTACCCGGTA+TGG | + | chr5_1:68283781-68283800 | Msa0746190:intron | 60.0% | |
| TACGGGTACGGTACGCGGTA+TGG | + | chr5_1:68284034-68284053 | Msa0746190:intron | 60.0% | |
| GGGTACGCGTACGATACTCG+TGG | - | chr5_1:68284262-68284281 | None:intergenic | 60.0% | |
| ACCCGGTATGGGTGTGTACC+CGG | + | chr5_1:68284278-68284297 | Msa0746190:intron | 60.0% | |
| ACCGGGTACACACCCATACC+GGG | - | chr5_1:68284282-68284301 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 68278338 | 68284892 | 68278338 | ID=Msa0746190;Name=Msa0746190 |
| chr5_1 | mRNA | 68278338 | 68284892 | 68278338 | ID=Msa0746190-mRNA-1;Parent=Msa0746190;Name=Msa0746190-mRNA-1;_AED=0.03;_eAED=0.03;_QI=310|1|1|1|0.33|0.25|4|122|488 |
| chr5_1 | exon | 68278338 | 68278609 | 68278338 | ID=Msa0746190-mRNA-1:exon:20313;Parent=Msa0746190-mRNA-1 |
| chr5_1 | exon | 68279160 | 68280199 | 68279160 | ID=Msa0746190-mRNA-1:exon:20314;Parent=Msa0746190-mRNA-1 |
| chr5_1 | exon | 68280296 | 68280454 | 68280296 | ID=Msa0746190-mRNA-1:exon:20315;Parent=Msa0746190-mRNA-1 |
| chr5_1 | exon | 68284465 | 68284892 | 68284465 | ID=Msa0746190-mRNA-1:exon:20316;Parent=Msa0746190-mRNA-1 |
| chr5_1 | five_prime_UTR | 68278338 | 68278609 | 68278338 | ID=Msa0746190-mRNA-1:five_prime_utr;Parent=Msa0746190-mRNA-1 |
| chr5_1 | five_prime_UTR | 68279160 | 68279197 | 68279160 | ID=Msa0746190-mRNA-1:five_prime_utr;Parent=Msa0746190-mRNA-1 |
| chr5_1 | CDS | 68279198 | 68280199 | 68279198 | ID=Msa0746190-mRNA-1:cds;Parent=Msa0746190-mRNA-1 |
| chr5_1 | CDS | 68280296 | 68280454 | 68280296 | ID=Msa0746190-mRNA-1:cds;Parent=Msa0746190-mRNA-1 |
| chr5_1 | CDS | 68284465 | 68284770 | 68284465 | ID=Msa0746190-mRNA-1:cds;Parent=Msa0746190-mRNA-1 |
| chr5_1 | three_prime_UTR | 68284771 | 68284892 | 68284771 | ID=Msa0746190-mRNA-1:three_prime_utr;Parent=Msa0746190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
