Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0852330 | MCH79656.1 | 59.486 | 506 | 186 | 8 | 1 | 487 | 1 | 506 | 0.0 | 561 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0852330 | A0A392LXJ4 | 59.486 | 506 | 186 | 8 | 1 | 487 | 1 | 506 | 0.0 | 561 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0746190 | Msa0852330 | 0.884930 | 1.258825e-71 | -8.615850e-47 |
| Msa0812090 | Msa0852330 | 0.897437 | 1.407341e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0852330 | MtrunA17_Chr7g0275031 | 57.895 | 494 | 195 | 6 | 1 | 487 | 1 | 488 | 0.0 | 542 |
| Msa0852330 | MtrunA17_Chr7g0273381 | 58.367 | 490 | 185 | 8 | 1 | 488 | 1 | 473 | 0.0 | 536 |
| Msa0852330 | MtrunA17_Chr1g0210341 | 54.790 | 334 | 144 | 5 | 158 | 488 | 9 | 338 | 8.82e-107 | 321 |
| Msa0852330 | MtrunA17_Chr7g0274761 | 58.400 | 250 | 95 | 3 | 1 | 246 | 1 | 245 | 4.52e-87 | 268 |
| Msa0852330 | MtrunA17_Chr5g0442431 | 60.248 | 161 | 64 | 0 | 96 | 256 | 6 | 166 | 4.09e-61 | 197 |
| Msa0852330 | MtrunA17_Chr6g0453901 | 32.792 | 308 | 170 | 8 | 2 | 305 | 5 | 279 | 1.14e-35 | 138 |
| Msa0852330 | MtrunA17_Chr6g0453821 | 32.792 | 308 | 170 | 8 | 2 | 305 | 5 | 279 | 3.17e-35 | 138 |
| Msa0852330 | MtrunA17_Chr7g0266931 | 31.126 | 302 | 183 | 7 | 6 | 304 | 35 | 314 | 2.05e-30 | 120 |
| Msa0852330 | MtrunA17_Chr7g0254311 | 30.667 | 300 | 175 | 9 | 7 | 304 | 10 | 278 | 1.32e-27 | 114 |
| Msa0852330 | MtrunA17_Chr7g0260121 | 33.871 | 248 | 141 | 7 | 7 | 254 | 12 | 236 | 1.16e-26 | 113 |
| Msa0852330 | MtrunA17_Chr7g0254851 | 28.205 | 390 | 226 | 12 | 6 | 369 | 9 | 370 | 1.59e-26 | 113 |
| Msa0852330 | MtrunA17_Chr7g0254851 | 26.641 | 259 | 169 | 9 | 196 | 443 | 292 | 540 | 8.74e-11 | 64.3 |
| Msa0852330 | MtrunA17_Chr7g0254771 | 29.766 | 299 | 181 | 7 | 6 | 304 | 9 | 278 | 6.18e-24 | 105 |
| Msa0852330 | MtrunA17_Chr7g0254771 | 27.509 | 269 | 163 | 8 | 207 | 467 | 305 | 549 | 1.37e-13 | 73.2 |
| Msa0852330 | MtrunA17_Chr2g0312391 | 31.873 | 251 | 154 | 6 | 2 | 252 | 13 | 246 | 1.05e-23 | 101 |
| Msa0852330 | MtrunA17_Chr7g0274771 | 70.690 | 58 | 17 | 0 | 387 | 444 | 1 | 58 | 7.07e-23 | 92.0 |
| Msa0852330 | MtrunA17_Chr3g0079861 | 29.960 | 247 | 150 | 5 | 8 | 254 | 16 | 239 | 2.54e-21 | 97.4 |
| Msa0852330 | MtrunA17_Chr7g0258241 | 29.078 | 282 | 162 | 8 | 91 | 347 | 24 | 292 | 7.20e-20 | 91.3 |
| Msa0852330 | MtrunA17_Chr7g0260261 | 29.600 | 250 | 149 | 6 | 8 | 254 | 16 | 241 | 9.57e-20 | 92.4 |
| Msa0852330 | MtrunA17_Chr7g0260261 | 26.562 | 320 | 198 | 12 | 193 | 487 | 296 | 603 | 5.94e-12 | 68.2 |
| Msa0852330 | MtrunA17_Chr7g0256081 | 31.518 | 257 | 137 | 12 | 6 | 254 | 45 | 270 | 3.12e-18 | 87.8 |
| Msa0852330 | MtrunA17_Chr7g0256081 | 26.573 | 286 | 175 | 9 | 193 | 467 | 324 | 585 | 5.77e-12 | 68.2 |
| Msa0852330 | MtrunA17_Chr7g0260111 | 34.359 | 195 | 109 | 6 | 7 | 200 | 11 | 187 | 4.19e-17 | 82.4 |
| Msa0852330 | MtrunA17_Chr7g0267251 | 26.493 | 268 | 165 | 9 | 209 | 468 | 37 | 280 | 6.22e-17 | 81.3 |
| Msa0852330 | MtrunA17_Chr6g0478831 | 29.508 | 183 | 110 | 4 | 6 | 188 | 9 | 172 | 9.80e-16 | 75.5 |
| Msa0852330 | MtrunA17_Chr2g0293781 | 29.502 | 261 | 112 | 9 | 88 | 284 | 20 | 272 | 2.08e-14 | 74.3 |
| Msa0852330 | MtrunA17_Chr8g0362281 | 25.616 | 406 | 260 | 16 | 90 | 478 | 89 | 469 | 1.66e-12 | 69.3 |
| Msa0852330 | MtrunA17_Chr2g0312381 | 27.419 | 186 | 122 | 6 | 289 | 466 | 1 | 181 | 8.31e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 86 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTTCAACTACGCAGTTTA+TGG | 0.130996 | 5_4:+43361193 | None:intergenic |
| AGTATCAATCTTCTCTTTCT+AGG | 0.199865 | 5_4:-43360159 | Msa0852330:CDS |
| GAACCTTACTAGAGATAAAA+TGG | 0.237948 | 5_4:-43360595 | Msa0852330:exon |
| TTATGTCATCTCAAGATTAT+AGG | 0.238777 | 5_4:-43359841 | Msa0852330:CDS |
| ACTAAAAGTTTCTGCAAAAT+AGG | 0.249125 | 5_4:+43359346 | None:intergenic |
| TGGAATAAAGTCGCAATTAA+AGG | 0.262708 | 5_4:+43360014 | None:intergenic |
| AAACCAATGAACGTAGTTTA+AGG | 0.265682 | 5_4:+43359758 | None:intergenic |
| AAAACTTGAGCTAATAGTTC+TGG | 0.267352 | 5_4:-43354923 | Msa0852330:CDS |
| TTTCATGGTGAACTTTCATT+TGG | 0.327756 | 5_4:-43360244 | Msa0852330:CDS |
| TGGTTTACCGTGGATATATA+TGG | 0.340282 | 5_4:-43359741 | Msa0852330:CDS |
| AAGAGAGTCATCAATTTAGA+TGG | 0.344617 | 5_4:-43360336 | Msa0852330:CDS |
| TTGATGACTCTCTTTATAGT+AGG | 0.344969 | 5_4:+43360345 | None:intergenic |
| ACCTCATCCTTTCCTTGAGC+TGG | 0.349036 | 5_4:-43359429 | Msa0852330:CDS |
| TTTACAAGGAACCGTGGATA+TGG | 0.362010 | 5_4:+43355069 | None:intergenic |
| TAATAGTTCTGGGTCCCTAT+TGG | 0.365075 | 5_4:-43354912 | Msa0852330:CDS |
| AAGATCTTCATTGAATGAAA+TGG | 0.369470 | 5_4:+43359663 | None:intergenic |
| TGAGTCATTTCCTTCCCAAT+AGG | 0.369669 | 5_4:+43354897 | None:intergenic |
| TATGTCATCTCAAGATTATA+GGG | 0.379823 | 5_4:-43359840 | Msa0852330:CDS |
| TTGCCTTAAACTACGTTCAT+TGG | 0.380340 | 5_4:-43359761 | Msa0852330:CDS |
| CAAGATTATAGGGTGCTATA+TGG | 0.383951 | 5_4:-43359830 | Msa0852330:CDS |
| ATCGCTTGAAGAAGTAGAAT+TGG | 0.386166 | 5_4:-43359971 | Msa0852330:CDS |
| GAGTCATTTCCTTCCCAATA+GGG | 0.390477 | 5_4:+43354898 | None:intergenic |
| AATAGTTCTGGGTCCCTATT+GGG | 0.394643 | 5_4:-43354911 | Msa0852330:CDS |
| TGGGAGGTTGCGTTGGCAAT+TGG | 0.402333 | 5_4:-43354987 | Msa0852330:CDS |
| CACAATCGTCGATTCTTTCA+TGG | 0.405260 | 5_4:-43360259 | Msa0852330:CDS |
| CTTCATCTCTAAACCATCTT+CGG | 0.410662 | 5_4:-43360062 | Msa0852330:CDS |
| GGTGCAAGCTTTCTGCTCTA+AGG | 0.421048 | 5_4:-43360473 | Msa0852330:CDS |
| TCCATAAACTGCGTAGTTGA+AGG | 0.423422 | 5_4:-43361194 | Msa0852330:five_prime_UTR |
| TGGGAAGGAAATGACTCATT+GGG | 0.438232 | 5_4:-43354892 | Msa0852330:CDS |
| TTGGGAAGGAAATGACTCAT+TGG | 0.442797 | 5_4:-43354893 | Msa0852330:CDS |
| GGAATAAAGTCGCAATTAAA+GGG | 0.449804 | 5_4:+43360015 | None:intergenic |
| AAACTTGAGCTAATAGTTCT+GGG | 0.458817 | 5_4:-43354922 | Msa0852330:CDS |
| TTTCATATCTTCAATGTGCT+TGG | 0.462836 | 5_4:-43360438 | Msa0852330:CDS |
| TGAGTTCAAATCATCAAAGT+TGG | 0.467816 | 5_4:-43359881 | Msa0852330:CDS |
| AAGCCATCTTAGTATCTAGA+AGG | 0.479268 | 5_4:-43360497 | Msa0852330:CDS |
| AACTGTCTAAGATGTTTGAA+TGG | 0.490498 | 5_4:+43359454 | None:intergenic |
| TGGGAAATCTTAAATGATGT+AGG | 0.491001 | 5_4:-43359409 | Msa0852330:CDS |
| GTAGTTGAAGGCTGTTGAAA+AGG | 0.499081 | 5_4:-43361182 | Msa0852330:intron |
| AAGTCGATGCTCTTCACCAT+AGG | 0.501755 | 5_4:+43359688 | None:intergenic |
| GATCGTATGTGGTTTAAAAG+TGG | 0.503401 | 5_4:-43354859 | Msa0852330:CDS |
| TGATGACTCTCTTTATAGTA+GGG | 0.505641 | 5_4:+43360346 | None:intergenic |
| ATTTAAGATTTCCCAGCTCA+AGG | 0.507325 | 5_4:+43359417 | None:intergenic |
| CCTCATCCTTTCCTTGAGCT+GGG | 0.507544 | 5_4:-43359428 | Msa0852330:CDS |
| GGTTTAAAAGTGGGCGTGAA+AGG | 0.508005 | 5_4:-43354849 | Msa0852330:CDS |
| GGCTTTCGACAAATCTTCCA+TGG | 0.509166 | 5_4:+43360515 | None:intergenic |
| GCAAAATAGGAGAAGCTTGG+AGG | 0.510608 | 5_4:+43359359 | None:intergenic |
| TATCTTTACAACTTTATCCA+TGG | 0.510752 | 5_4:-43360532 | Msa0852330:CDS |
| ACATGCATAATCTCAAGTTC+AGG | 0.512733 | 5_4:+43359613 | None:intergenic |
| CGTGAACATTAATACCCCTA+TGG | 0.529668 | 5_4:-43359704 | Msa0852330:CDS |
| AAAGCAACACTATTGATCAA+TGG | 0.531010 | 5_4:-43360212 | Msa0852330:CDS |
| AATTTCCCTATCACAAAACT+CGG | 0.531478 | 5_4:-43360375 | Msa0852330:CDS |
| TCAATCTTCTCTTTCTAGGA+AGG | 0.532385 | 5_4:-43360155 | Msa0852330:CDS |
| GATCGAATTCTGATCGTATG+TGG | 0.535765 | 5_4:-43354870 | Msa0852330:CDS |
| AGTCGATGCTCTTCACCATA+GGG | 0.541960 | 5_4:+43359689 | None:intergenic |
| TGGATATATATGGTGTGGAT+TGG | 0.542658 | 5_4:-43359731 | Msa0852330:CDS |
| TCTGCAAAATAGGAGAAGCT+TGG | 0.545907 | 5_4:+43359356 | None:intergenic |
| TATAAGAAAGAAAGAATGAA+AGG | 0.546993 | 5_4:+43361243 | None:intergenic |
| ATATACGACAAGATGTCGTC+GGG | 0.547341 | 5_4:+43360552 | None:intergenic |
| GGGAAATCTTAAATGATGTA+GGG | 0.548239 | 5_4:-43359408 | Msa0852330:CDS |
| TTTGTCAGTTTCCATATCCA+CGG | 0.550868 | 5_4:-43355080 | Msa0852330:intron |
| ATCGTATGTGGTTTAAAAGT+GGG | 0.553312 | 5_4:-43354858 | Msa0852330:CDS |
| CCCAGCTCAAGGAAAGGATG+AGG | 0.567674 | 5_4:+43359428 | None:intergenic |
| TGTGCTTGGCAGCAGTGAGA+AGG | 0.571694 | 5_4:-43360424 | Msa0852330:CDS |
| TACCGTGGATATATATGGTG+TGG | 0.572259 | 5_4:-43359736 | Msa0852330:CDS |
| GAAAGAAAGAATGAAAGGAA+TGG | 0.576799 | 5_4:+43361248 | None:intergenic |
| GATATACGACAAGATGTCGT+CGG | 0.577491 | 5_4:+43360551 | None:intergenic |
| TAAAGTCGCAATTAAAGGGA+TGG | 0.580153 | 5_4:+43360019 | None:intergenic |
| AGGGAAATTCATGAGATACC+TGG | 0.588256 | 5_4:+43360389 | None:intergenic |
| AGAGAGTCATCAATTTAGAT+GGG | 0.590259 | 5_4:-43360335 | Msa0852330:CDS |
| GTTGAACTGGGAGGTTGCGT+TGG | 0.591594 | 5_4:-43354994 | Msa0852330:CDS |
| CTACGTTCATTGGTTTACCG+TGG | 0.595791 | 5_4:-43359751 | Msa0852330:CDS |
| CCACCTTCTAGATACTAAGA+TGG | 0.596886 | 5_4:+43360494 | None:intergenic |
| GCTTCAAGGCGAATTAGTAG+TGG | 0.601872 | 5_4:-43354815 | Msa0852330:CDS |
| ATTTCCCTATCACAAAACTC+GGG | 0.603170 | 5_4:-43360374 | Msa0852330:CDS |
| AGATTTCCCAGCTCAAGGAA+AGG | 0.605408 | 5_4:+43359422 | None:intergenic |
| GCATGTGGACATATATTCGA+CGG | 0.605548 | 5_4:-43359596 | Msa0852330:intron |
| AGAAGGAACTACTACCAGCC+AGG | 0.609158 | 5_4:-43360407 | Msa0852330:CDS |
| TGAACTTGAGATTATGCATG+TGG | 0.623369 | 5_4:-43359611 | Msa0852330:CDS |
| ATCCACACCATATATATCCA+CGG | 0.625357 | 5_4:+43359734 | None:intergenic |
| CTTCAAGGCGAATTAGTAGT+GGG | 0.626117 | 5_4:-43354814 | Msa0852330:CDS |
| AAATTCATGAGATACCTGGC+TGG | 0.633407 | 5_4:+43360393 | None:intergenic |
| CCATCTTAGTATCTAGAAGG+TGG | 0.640967 | 5_4:-43360494 | Msa0852330:CDS |
| GTTCTGGGTCCCTATTGGGA+AGG | 0.647615 | 5_4:-43354907 | Msa0852330:CDS |
| GTCGATGCTCTTCACCATAG+GGG | 0.676683 | 5_4:+43359690 | None:intergenic |
| CCTTACTAGAGATAAAATGG+AGG | 0.706202 | 5_4:-43360592 | Msa0852330:exon |
| TGAAACATTCTCCCACAACG+AGG | 0.775786 | 5_4:-43355025 | Msa0852330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAGTAATTAAAATTTTTTTT+TGG | + | chr5_4:43357222-43357241 | None:intergenic | 10.0% |
| !!! | AAATATGAATAACATTTTTT+TGG | + | chr5_4:43357308-43357327 | None:intergenic | 10.0% |
| !!! | ATGTCATAAAAAATTATTTT+AGG | + | chr5_4:43357355-43357374 | None:intergenic | 10.0% |
| !!! | ATTAATATTTGTTTTAGGTA+CGG | - | chr5_4:43354757-43354776 | Msa0852330:three_prime_UTR | 15.0% |
| !! | AAACATAGAAATAAATCAAT+AGG | + | chr5_4:43354837-43354856 | None:intergenic | 15.0% |
| !!! | TTGTTTCTATGTTATTATTA+AGG | - | chr5_4:43354931-43354950 | Msa0852330:CDS | 15.0% |
| !!! | TTTTATATATTTGTATAGCT+TGG | + | chr5_4:43355254-43355273 | None:intergenic | 15.0% |
| !! | ATTCTACTTATATATATTTC+AGG | - | chr5_4:43355341-43355360 | Msa0852330:intron | 15.0% |
| !! | TAAAATTGATTGTGAATATA+TGG | + | chr5_4:43356799-43356818 | None:intergenic | 15.0% |
| !! | TAAGAAATAGGTATTTAAAT+AGG | + | chr5_4:43356987-43357006 | None:intergenic | 15.0% |
| !!! | TAAACTAGTTTATAAGAAAT+AGG | + | chr5_4:43356999-43357018 | None:intergenic | 15.0% |
| !!! | ATATTTAACATGACATTTTA+GGG | - | chr5_4:43357097-43357116 | Msa0852330:intron | 15.0% |
| !!! | ATTAAAATTTTTTTTTGGAC+AGG | + | chr5_4:43357217-43357236 | None:intergenic | 15.0% |
| !! | AAAAATAAAAATAAAGAGAG+CGG | + | chr5_4:43357615-43357634 | None:intergenic | 15.0% |
| !!! | TATCAATCTATTTTATAACA+TGG | + | chr5_4:43357975-43357994 | None:intergenic | 15.0% |
| !!! | ATTTAATTTGTTTTACAGAT+TGG | + | chr5_4:43359571-43359590 | None:intergenic | 15.0% |
| !! | AACGTTATAGAATATAAAAT+AGG | - | chr5_4:43360129-43360148 | Msa0852330:CDS | 15.0% |
| !! | AACGTTATAGAATATAAAAT+AGG | - | chr5_4:43360129-43360148 | Msa0852330:CDS | 15.0% |
| !!! | TTTAAGCTTTGTGTTTTTTA+GGG | + | chr5_4:43354698-43354717 | None:intergenic | 20.0% |
| !!! | ATTTAAGCTTTGTGTTTTTT+AGG | + | chr5_4:43354699-43354718 | None:intergenic | 20.0% |
| !! | TATAAGAAAGAAAGAATGAA+AGG | + | chr5_4:43354737-43354756 | None:intergenic | 20.0% |
| !!! | TTTTAACACTTATGCTTAAT+TGG | - | chr5_4:43355211-43355230 | Msa0852330:intron | 20.0% |
| !! | TGGTATCCAATAATAAAAAT+CGG | - | chr5_4:43356167-43356186 | Msa0852330:intron | 20.0% |
| !!! | CATATGTTATGCATTTTTTA+TGG | - | chr5_4:43356681-43356700 | Msa0852330:intron | 20.0% |
| !! | AAGTGCAAATTTATTTATGA+AGG | + | chr5_4:43356731-43356750 | None:intergenic | 20.0% |
| !! | AAAATAGAGTTTAATCTCAT+TGG | + | chr5_4:43357068-43357087 | None:intergenic | 20.0% |
| !!! | GATATTTAACATGACATTTT+AGG | - | chr5_4:43357096-43357115 | Msa0852330:intron | 20.0% |
| !! | ATCATTTCAAAAGTTAGATT+TGG | + | chr5_4:43357516-43357535 | None:intergenic | 20.0% |
| !! | ATAACAAAACAAGAAAGAAT+AGG | + | chr5_4:43357854-43357873 | None:intergenic | 20.0% |
| !!! | TTTTTCATAAGCTCAAAAAT+AGG | + | chr5_4:43358287-43358306 | None:intergenic | 20.0% |
| !!! | TTTTTGAGCTTATGAAAAAT+AGG | - | chr5_4:43358288-43358307 | Msa0852330:intron | 20.0% |
| !!! | AGCGTTGAAAAATAAAAATT+GGG | + | chr5_4:43358732-43358751 | None:intergenic | 20.0% |
| !!! | AAGCGTTGAAAAATAAAAAT+TGG | + | chr5_4:43358733-43358752 | None:intergenic | 20.0% |
| !! | AAAACAATATCACAACAAAT+TGG | + | chr5_4:43359277-43359296 | None:intergenic | 20.0% |
| !! | AAAGTTTAACACTTCTTATT+GGG | + | chr5_4:43359462-43359481 | None:intergenic | 20.0% |
| !!! | CTGTTTCTAAGTATTTTTTT+TGG | + | chr5_4:43359645-43359664 | None:intergenic | 20.0% |
| !! | CAAAAAAAATACTTAGAAAC+AGG | - | chr5_4:43359643-43359662 | Msa0852330:CDS | 20.0% |
| !! | ACATGTGAATGATAAAAATA+AGG | - | chr5_4:43359796-43359815 | Msa0852330:CDS | 20.0% |
| !! | GTGAAATTGGAATATAAAAT+AGG | - | chr5_4:43359876-43359895 | Msa0852330:CDS | 20.0% |
| !!! | TTCTAATGTGATTTTTTTGT+TGG | + | chr5_4:43360039-43360058 | None:intergenic | 20.0% |
| !!! | AAAAGTTGAAATTTTAGAGT+TGG | - | chr5_4:43360064-43360083 | Msa0852330:CDS | 20.0% |
| !!! | TTCTAATGTGATTTTTTTGT+TGG | + | chr5_4:43360039-43360058 | None:intergenic | 20.0% |
| !!! | AAAAAGTTGAAATTTAGAGT+TGG | - | chr5_4:43360316-43360335 | Msa0852330:CDS | 20.0% |
| !!! | TTCTAATGTGATTTTTTTGT+TGG | + | chr5_4:43360039-43360058 | None:intergenic | 20.0% |
| !!! | AAAAAGTTGAAATTTAGAGT+TGG | - | chr5_4:43360316-43360335 | Msa0852330:CDS | 20.0% |
| !! | CATAATACAATGAGTTAAAA+TGG | - | chr5_4:43360672-43360691 | Msa0852330:intron | 20.0% |
| !!! | TTTGTGTTTTTTAGGGTTTT+TGG | + | chr5_4:43354691-43354710 | None:intergenic | 25.0% |
| !! | ATCTATAGCATCTTTTTATG+AGG | - | chr5_4:43355013-43355032 | Msa0852330:CDS | 25.0% |
| !! | TAGATGATATCATCATTTTC+TGG | - | chr5_4:43355038-43355057 | Msa0852330:CDS | 25.0% |
| ! | TATCTTTACAACTTTATCCA+TGG | - | chr5_4:43355445-43355464 | Msa0852330:intron | 25.0% |
| !! | AGAGATCTCAAATTTTTGAA+TGG | + | chr5_4:43355986-43356005 | None:intergenic | 25.0% |
| ! | TTATGTCATCTCAAGATTAT+AGG | - | chr5_4:43356136-43356155 | Msa0852330:intron | 25.0% |
| ! | TATGTCATCTCAAGATTATA+GGG | - | chr5_4:43356137-43356156 | Msa0852330:intron | 25.0% |
| ! | ATCCAATAATAAAAATCGGA+TGG | - | chr5_4:43356171-43356190 | Msa0852330:intron | 25.0% |
| !! | TTCCATCCGATTTTTATTAT+TGG | + | chr5_4:43356176-43356195 | None:intergenic | 25.0% |
| ! | AAGATCTTCATTGAATGAAA+TGG | + | chr5_4:43356317-43356336 | None:intergenic | 25.0% |
| ! | ACTAAAAGTTTCTGCAAAAT+AGG | + | chr5_4:43356634-43356653 | None:intergenic | 25.0% |
| !!! | CATTTTTTATGGTTATCGTT+TGG | - | chr5_4:43356692-43356711 | Msa0852330:intron | 25.0% |
| ! | ACTAGAGATCAAAATAGTTT+AGG | - | chr5_4:43356835-43356854 | Msa0852330:intron | 25.0% |
| ! | AATCTCCAAAAAATTAATGC+AGG | - | chr5_4:43357173-43357192 | Msa0852330:intron | 25.0% |
| !!! | ATTAGCCTGCATTAATTTTT+TGG | + | chr5_4:43357181-43357200 | None:intergenic | 25.0% |
| ! | AAATGAAATGACAATTAGTC+AGG | + | chr5_4:43357275-43357294 | None:intergenic | 25.0% |
| ! | GTTAGATTTGGAAAGATAAT+GGG | + | chr5_4:43357504-43357523 | None:intergenic | 25.0% |
| ! | AGTTAGATTTGGAAAGATAA+TGG | + | chr5_4:43357505-43357524 | None:intergenic | 25.0% |
| ! | CAAAAGAGAAAATTATGCAT+GGG | + | chr5_4:43357745-43357764 | None:intergenic | 25.0% |
| ! | TCAAAAGAGAAAATTATGCA+TGG | + | chr5_4:43357746-43357765 | None:intergenic | 25.0% |
| ! | ATTTATGAAATGTCAACATG+TGG | + | chr5_4:43357946-43357965 | None:intergenic | 25.0% |
| !!! | AGAAAAGCACTAAATCTAAT+GGG | - | chr5_4:43358035-43358054 | Msa0852330:intron | 25.0% |
| ! | TACTTTCATATTGTAGTTTG+TGG | + | chr5_4:43358074-43358093 | None:intergenic | 25.0% |
| ! | ACTGAAAATGATTCTTCAAT+TGG | + | chr5_4:43358859-43358878 | None:intergenic | 25.0% |
| ! | ATTATGTAAGATTGGAACAA+AGG | - | chr5_4:43359340-43359359 | Msa0852330:intron | 25.0% |
| ! | TTATGTAAGATTGGAACAAA+GGG | - | chr5_4:43359341-43359360 | Msa0852330:intron | 25.0% |
| ! | AAGTTTAACACTTCTTATTG+GGG | + | chr5_4:43359461-43359480 | None:intergenic | 25.0% |
| ! | CAAAGTTTAACACTTCTTAT+TGG | + | chr5_4:43359463-43359482 | None:intergenic | 25.0% |
| !!! | CAATAAGAAGTGTTAAACTT+TGG | - | chr5_4:43359461-43359480 | Msa0852330:CDS | 25.0% |
| !! | AAAACCTTTTATCATCTCAA+AGG | + | chr5_4:43359731-43359750 | None:intergenic | 25.0% |
| !! | ACATACACAAAACCTATTTT+TGG | + | chr5_4:43359907-43359926 | None:intergenic | 25.0% |
| ! | ATTCTATAACAAAACCATAC+CGG | + | chr5_4:43359986-43360005 | None:intergenic | 25.0% |
| !! | ACATACACAAAACCTATTTT+TGG | + | chr5_4:43359907-43359926 | None:intergenic | 25.0% |
| ! | ATTCTATAACAAAACCATAC+CGG | + | chr5_4:43359986-43360005 | None:intergenic | 25.0% |
| !! | ACATACACAAAACCTATTTT+TGG | + | chr5_4:43359907-43359926 | None:intergenic | 25.0% |
| ! | ATTCTATAACAAAACCATAC+CGG | + | chr5_4:43359986-43360005 | None:intergenic | 25.0% |
| ! | TGTATTATGAGTGAAATTTG+TGG | + | chr5_4:43360661-43360680 | None:intergenic | 25.0% |
| !!! | ATGTTTTGATTTGCATTCAT+TGG | - | chr5_4:43360831-43360850 | Msa0852330:intron | 25.0% |
| !!! | TGTTTTGATTTGCATTCATT+GGG | - | chr5_4:43360832-43360851 | Msa0852330:intron | 25.0% |
| ! | ACAAAATTCAAATCACAACA+TGG | + | chr5_4:43360882-43360901 | None:intergenic | 25.0% |
| !! | TGATATCTTTTTGCTTTACA+AGG | + | chr5_4:43360925-43360944 | None:intergenic | 25.0% |
| ! | TTGTAAAGCAAAAAGATATC+AGG | - | chr5_4:43360924-43360943 | Msa0852330:intron | 25.0% |
| ! | TGTAAAGCAAAAAGATATCA+GGG | - | chr5_4:43360925-43360944 | Msa0852330:intron | 25.0% |
| !! | AACTATTAGCTCAAGTTTTT+GGG | + | chr5_4:43361053-43361072 | None:intergenic | 25.0% |
| GAAAGAAAGAATGAAAGGAA+TGG | + | chr5_4:43354732-43354751 | None:intergenic | 30.0% | |
| GAACCTTACTAGAGATAAAA+TGG | - | chr5_4:43355382-43355401 | Msa0852330:intron | 30.0% | |
| TTTCATATCTTCAATGTGCT+TGG | - | chr5_4:43355539-43355558 | Msa0852330:intron | 30.0% | |
| AATTTCCCTATCACAAAACT+CGG | - | chr5_4:43355602-43355621 | Msa0852330:intron | 30.0% | |
| TGATGACTCTCTTTATAGTA+GGG | + | chr5_4:43355634-43355653 | None:intergenic | 30.0% | |
| ! | TTGATGACTCTCTTTATAGT+AGG | + | chr5_4:43355635-43355654 | None:intergenic | 30.0% |
| AAGAGAGTCATCAATTTAGA+TGG | - | chr5_4:43355641-43355660 | Msa0852330:intron | 30.0% | |
| AGAGAGTCATCAATTTAGAT+GGG | - | chr5_4:43355642-43355661 | Msa0852330:intron | 30.0% | |
| TTTCATGGTGAACTTTCATT+TGG | - | chr5_4:43355733-43355752 | Msa0852330:intron | 30.0% | |
| AAAGCAACACTATTGATCAA+TGG | - | chr5_4:43355765-43355784 | Msa0852330:intron | 30.0% | |
| AGTATCAATCTTCTCTTTCT+AGG | - | chr5_4:43355818-43355837 | Msa0852330:intron | 30.0% | |
| GGAATAAAGTCGCAATTAAA+GGG | + | chr5_4:43355965-43355984 | None:intergenic | 30.0% | |
| TGGAATAAAGTCGCAATTAA+AGG | + | chr5_4:43355966-43355985 | None:intergenic | 30.0% | |
| TGAGTTCAAATCATCAAAGT+TGG | - | chr5_4:43356096-43356115 | Msa0852330:intron | 30.0% | |
| ! | GGAAGTAAACTTGATTTTAC+TGG | - | chr5_4:43356192-43356211 | Msa0852330:intron | 30.0% |
| AAACCAATGAACGTAGTTTA+AGG | + | chr5_4:43356222-43356241 | None:intergenic | 30.0% | |
| !!! | TGAATGGTTGAGTTGTTTTT+GGG | + | chr5_4:43356510-43356529 | None:intergenic | 30.0% |
| !! | TTGAATGGTTGAGTTGTTTT+TGG | + | chr5_4:43356511-43356530 | None:intergenic | 30.0% |
| ! | AACTGTCTAAGATGTTTGAA+TGG | + | chr5_4:43356526-43356545 | None:intergenic | 30.0% |
| TGGGAAATCTTAAATGATGT+AGG | - | chr5_4:43356568-43356587 | Msa0852330:intron | 30.0% | |
| GGGAAATCTTAAATGATGTA+GGG | - | chr5_4:43356569-43356588 | Msa0852330:intron | 30.0% | |
| ! | TTTGCAGAAACTTTTAGTCA+TGG | - | chr5_4:43356636-43356655 | Msa0852330:intron | 30.0% |
| !!! | AATTTGCACTTTTGACTTAG+TGG | - | chr5_4:43356740-43356759 | Msa0852330:intron | 30.0% |
| !!! | ATTTGCACTTTTGACTTAGT+GGG | - | chr5_4:43356741-43356760 | Msa0852330:intron | 30.0% |
| !! | AGTTTTATAAGGCCTAATCT+TGG | - | chr5_4:43356866-43356885 | Msa0852330:intron | 30.0% |
| TTGGCATGGTCAAAAAATTT+AGG | - | chr5_4:43356885-43356904 | Msa0852330:intron | 30.0% | |
| !! | TTTAGGTTTGACCTTTTTGA+AGG | - | chr5_4:43356943-43356962 | Msa0852330:intron | 30.0% |
| GTCATATCAAACCTTCAAAA+AGG | + | chr5_4:43356957-43356976 | None:intergenic | 30.0% | |
| AGGTATTTAAATAGGCTAAG+AGG | + | chr5_4:43356979-43356998 | None:intergenic | 30.0% | |
| !! | ATCTCATTGGTTTACTAACT+TGG | + | chr5_4:43357055-43357074 | None:intergenic | 30.0% |
| ATTAAAATAGGCAGTCAAGT+AGG | - | chr5_4:43357329-43357348 | Msa0852330:intron | 30.0% | |
| TACTTGGCTAAAAAAAAGTC+AGG | + | chr5_4:43357384-43357403 | None:intergenic | 30.0% | |
| !!! | TGACTTTTTTTTAGCCAAGT+AGG | - | chr5_4:43357383-43357402 | Msa0852330:intron | 30.0% |
| TAATAAGAGTAGTCCTAGTT+GGG | - | chr5_4:43357410-43357429 | Msa0852330:intron | 30.0% | |
| !! | ATGATTGCTTTTCTCACATA+AGG | - | chr5_4:43357662-43357681 | Msa0852330:intron | 30.0% |
| AAATGACCAAAAAACTCCAA+CGG | + | chr5_4:43357788-43357807 | None:intergenic | 30.0% | |
| ! | TTTTAAGCAACTTCGTATGT+TGG | - | chr5_4:43357816-43357835 | Msa0852330:intron | 30.0% |
| ! | TTAGATTTAGTGCTTTTCTC+TGG | + | chr5_4:43358034-43358053 | None:intergenic | 30.0% |
| !! | GAGAAAAGCACTAAATCTAA+TGG | - | chr5_4:43358034-43358053 | Msa0852330:intron | 30.0% |
| TATTATTCATCAGCTTGTCA+AGG | + | chr5_4:43358401-43358420 | None:intergenic | 30.0% | |
| TTAAATATGCGTTCCAACAT+GGG | + | chr5_4:43358507-43358526 | None:intergenic | 30.0% | |
| AAGTAAGATTGTAACGATCA+AGG | - | chr5_4:43358570-43358589 | Msa0852330:intron | 30.0% | |
| ACATGGAAAAAATGGTACTT+AGG | + | chr5_4:43358678-43358697 | None:intergenic | 30.0% | |
| CAATAAACTCTGATACTATG+TGG | - | chr5_4:43358792-43358811 | Msa0852330:intron | 30.0% | |
| CTATGTGGAAAAATGTTTAG+AGG | - | chr5_4:43358807-43358826 | Msa0852330:intron | 30.0% | |
| !! | ATTGAATTCATTTCTGGAGT+CGG | - | chr5_4:43358901-43358920 | Msa0852330:intron | 30.0% |
| GTTATGCACCAAATAAAAGA+GGG | + | chr5_4:43359224-43359243 | None:intergenic | 30.0% | |
| AAAGATACATCTAACTGCAT+GGG | - | chr5_4:43359248-43359267 | Msa0852330:intron | 30.0% | |
| TGAGACCCGATTAATAATAT+AGG | - | chr5_4:43359415-43359434 | Msa0852330:CDS | 30.0% | |
| !! | AGGAGACATATAGTCATTTT+AGG | + | chr5_4:43359514-43359533 | None:intergenic | 30.0% |
| TTAGTCTCGGAAAAAAAAAG+AGG | - | chr5_4:43359544-43359563 | Msa0852330:intron | 30.0% | |
| TTCTATAACAAAACCATACC+GGG | + | chr5_4:43359985-43360004 | None:intergenic | 30.0% | |
| TTCTATAACAAAACCATACC+GGG | + | chr5_4:43359985-43360004 | None:intergenic | 30.0% | |
| TTCTATAACAAAACCATACC+GGG | + | chr5_4:43359985-43360004 | None:intergenic | 30.0% | |
| ! | AACAATTTTTACCTCGTTGT+GGG | + | chr5_4:43360966-43360985 | None:intergenic | 30.0% |
| GAGGTAAAAATTGTTGAACT+GGG | - | chr5_4:43360971-43360990 | Msa0852330:intron | 30.0% | |
| ! | GAACTATTAGCTCAAGTTTT+TGG | + | chr5_4:43361054-43361073 | None:intergenic | 30.0% |
| AAAACTTGAGCTAATAGTTC+TGG | - | chr5_4:43361054-43361073 | Msa0852330:intron | 30.0% | |
| AAACTTGAGCTAATAGTTCT+GGG | - | chr5_4:43361055-43361074 | Msa0852330:intron | 30.0% | |
| ATCGTATGTGGTTTAAAAGT+GGG | - | chr5_4:43361119-43361138 | Msa0852330:intron | 30.0% | |
| AGGATTAACAAAAAGCTTCA+AGG | - | chr5_4:43361148-43361167 | Msa0852330:intron | 30.0% | |
| CTAAAAACGAATTCCAGCAA+CGG | + | chr5_4:43354977-43354996 | None:intergenic | 35.0% | |
| GTGATATTTATATGCTTGCG+TGG | - | chr5_4:43355183-43355202 | Msa0852330:intron | 35.0% | |
| GCTAAAGCTATACAGAGTTA+CGG | - | chr5_4:43355310-43355329 | Msa0852330:intron | 35.0% | |
| ! | CCTCCATTTTATCTCTAGTA+AGG | + | chr5_4:43355388-43355407 | None:intergenic | 35.0% |
| CCTTACTAGAGATAAAATGG+AGG | - | chr5_4:43355385-43355404 | Msa0852330:intron | 35.0% | |
| AAGCCATCTTAGTATCTAGA+AGG | - | chr5_4:43355480-43355499 | Msa0852330:intron | 35.0% | |
| ATTTCCCTATCACAAAACTC+GGG | - | chr5_4:43355603-43355622 | Msa0852330:intron | 35.0% | |
| ! | TCAGTTCGTCAAGAATTTTC+AGG | - | chr5_4:43355694-43355713 | Msa0852330:intron | 35.0% |
| ! | CAGTTCGTCAAGAATTTTCA+GGG | - | chr5_4:43355695-43355714 | Msa0852330:intron | 35.0% |
| !! | GGATACTTTTTGCAATTGCA+AGG | - | chr5_4:43355786-43355805 | Msa0852330:intron | 35.0% |
| ! | TCAATCTTCTCTTTCTAGGA+AGG | - | chr5_4:43355822-43355841 | Msa0852330:intron | 35.0% |
| CTTCATCTCTAAACCATCTT+CGG | - | chr5_4:43355915-43355934 | Msa0852330:intron | 35.0% | |
| TAAAGTCGCAATTAAAGGGA+TGG | + | chr5_4:43355961-43355980 | None:intergenic | 35.0% | |
| ATCGCTTGAAGAAGTAGAAT+TGG | - | chr5_4:43356006-43356025 | Msa0852330:intron | 35.0% | |
| ! | CAAGATTATAGGGTGCTATA+TGG | - | chr5_4:43356147-43356166 | Msa0852330:intron | 35.0% |
| TTGCCTTAAACTACGTTCAT+TGG | - | chr5_4:43356216-43356235 | Msa0852330:intron | 35.0% | |
| TGGTTTACCGTGGATATATA+TGG | - | chr5_4:43356236-43356255 | Msa0852330:intron | 35.0% | |
| ATCCACACCATATATATCCA+CGG | + | chr5_4:43356246-43356265 | None:intergenic | 35.0% | |
| TGGATATATATGGTGTGGAT+TGG | - | chr5_4:43356246-43356265 | Msa0852330:intron | 35.0% | |
| ACATGCATAATCTCAAGTTC+AGG | + | chr5_4:43356367-43356386 | None:intergenic | 35.0% | |
| TGAACTTGAGATTATGCATG+TGG | - | chr5_4:43356366-43356385 | Msa0852330:intron | 35.0% | |
| !!! | GAATGGTTGAGTTGTTTTTG+GGG | + | chr5_4:43356509-43356528 | None:intergenic | 35.0% |
| ! | ATTTAAGATTTCCCAGCTCA+AGG | + | chr5_4:43356563-43356582 | None:intergenic | 35.0% |
| ! | ATGTAGGGTATGATCTTTTG+TGG | - | chr5_4:43356584-43356603 | Msa0852330:intron | 35.0% |
| !! | AGGCCAAGCTAAGTTTTATA+AGG | - | chr5_4:43356855-43356874 | Msa0852330:intron | 35.0% |
| ! | AGGCCTTATAAAACTTAGCT+TGG | + | chr5_4:43356861-43356880 | None:intergenic | 35.0% |
| ! | TTTTTGACCATGCCAAGATT+AGG | + | chr5_4:43356881-43356900 | None:intergenic | 35.0% |
| !! | CACGTCATAGGCTTATTTTT+AGG | - | chr5_4:43356926-43356945 | Msa0852330:intron | 35.0% |
| ACTCTTATTAGAAGCCTACT+TGG | + | chr5_4:43357400-43357419 | None:intergenic | 35.0% | |
| CTAATAAGAGTAGTCCTAGT+TGG | - | chr5_4:43357409-43357428 | Msa0852330:intron | 35.0% | |
| !! | AGATTTGGAAAGATAATGGG+TGG | + | chr5_4:43357501-43357520 | None:intergenic | 35.0% |
| !!! | CTTTTGAAATGATTCCTACG+CGG | - | chr5_4:43357523-43357542 | Msa0852330:intron | 35.0% |
| AAAATAAAGAGAGCGGACAT+AGG | + | chr5_4:43357608-43357627 | None:intergenic | 35.0% | |
| GCAATCATCAAAGAATAGAC+AGG | + | chr5_4:43357650-43357669 | None:intergenic | 35.0% | |
| !!! | TAACTACCGTTGGAGTTTTT+TGG | - | chr5_4:43357779-43357798 | Msa0852330:intron | 35.0% |
| CGAAGTTGCTTAAAAACACA+TGG | + | chr5_4:43357811-43357830 | None:intergenic | 35.0% | |
| !! | ATCTAATGGGCTTGCTTAAT+AGG | - | chr5_4:43358048-43358067 | Msa0852330:intron | 35.0% |
| ATATTCATTCGTCAGCTTGA+GGG | + | chr5_4:43358139-43358158 | None:intergenic | 35.0% | |
| AATCTCCATATACACCTCTA+AGG | - | chr5_4:43358246-43358265 | Msa0852330:intron | 35.0% | |
| ATCTCCATATACACCTCTAA+GGG | - | chr5_4:43358247-43358266 | Msa0852330:intron | 35.0% | |
| GTTAAATATGCGTTCCAACA+TGG | + | chr5_4:43358508-43358527 | None:intergenic | 35.0% | |
| CAGATGAATCTATCTAGACA+GGG | + | chr5_4:43358617-43358636 | None:intergenic | 35.0% | |
| ! | ATGAGAGCACATGGAAAAAA+TGG | + | chr5_4:43358686-43358705 | None:intergenic | 35.0% |
| TAAAAATTGGGTCCAAGCTA+TGG | + | chr5_4:43358720-43358739 | None:intergenic | 35.0% | |
| AACGCTTGTTCAATAGATGA+TGG | - | chr5_4:43358746-43358765 | Msa0852330:intron | 35.0% | |
| ACGCTTGTTCAATAGATGAT+GGG | - | chr5_4:43358747-43358766 | Msa0852330:intron | 35.0% | |
| GACACGATTGAATTCATTTC+TGG | - | chr5_4:43358895-43358914 | Msa0852330:intron | 35.0% | |
| CTATGAACAATTGTAGACTC+AGG | - | chr5_4:43358987-43359006 | Msa0852330:intron | 35.0% | |
| !! | ACTTTTGAGTCATTTTCGAC+TGG | - | chr5_4:43359179-43359198 | Msa0852330:intron | 35.0% |
| !! | CTTTTGAGTCATTTTCGACT+GGG | - | chr5_4:43359180-43359199 | Msa0852330:intron | 35.0% |
| ! | CATCTGTACCCTCTTTTATT+TGG | - | chr5_4:43359213-43359232 | Msa0852330:intron | 35.0% |
| GGTTATGCACCAAATAAAAG+AGG | + | chr5_4:43359225-43359244 | None:intergenic | 35.0% | |
| GCAGTTAGATGTATCTTTCT+AGG | + | chr5_4:43359246-43359265 | None:intergenic | 35.0% | |
| GAAAGATACATCTAACTGCA+TGG | - | chr5_4:43359247-43359266 | Msa0852330:intron | 35.0% | |
| AAGATACATCTAACTGCATG+GGG | - | chr5_4:43359249-43359268 | Msa0852330:intron | 35.0% | |
| ! | TAATCTCGAGTCTTGTGTAT+TGG | + | chr5_4:43359324-43359343 | None:intergenic | 35.0% |
| GACTCGAGATTATGTAAGAT+TGG | - | chr5_4:43359332-43359351 | Msa0852330:intron | 35.0% | |
| GGCTGCCTATATTATTAATC+GGG | + | chr5_4:43359423-43359442 | None:intergenic | 35.0% | |
| CGGCTGCCTATATTATTAAT+CGG | + | chr5_4:43359424-43359443 | None:intergenic | 35.0% | |
| AAACAGGAGAATGCTAACAA+AGG | - | chr5_4:43359659-43359678 | Msa0852330:CDS | 35.0% | |
| AACAGGAGAATGCTAACAAA+GGG | - | chr5_4:43359660-43359679 | Msa0852330:CDS | 35.0% | |
| TTTATCATCTCAAAGGAACG+CGG | + | chr5_4:43359724-43359743 | None:intergenic | 35.0% | |
| !! | CGTTCCTTTGAGATGATAAA+AGG | - | chr5_4:43359724-43359743 | Msa0852330:CDS | 35.0% |
| AAATAGGCTGCACCAAAAAT+AGG | - | chr5_4:43359892-43359911 | Msa0852330:CDS | 35.0% | |
| TGTACGTACGTACATACATA+CGG | - | chr5_4:43359924-43359943 | Msa0852330:CDS | 35.0% | |
| AAATAGGCTGCACCAAAAAT+AGG | - | chr5_4:43359892-43359911 | Msa0852330:CDS | 35.0% | |
| TGTACGTACGTACATACATA+CGG | - | chr5_4:43359924-43359943 | Msa0852330:CDS | 35.0% | |
| AAATAGGCTGCACCAAAAAT+AGG | - | chr5_4:43359892-43359911 | Msa0852330:CDS | 35.0% | |
| TGTACGTACGTACATACATA+CGG | - | chr5_4:43359924-43359943 | Msa0852330:CDS | 35.0% | |
| AAGCATGGGTACTTGTAAAA+CGG | + | chr5_4:43360757-43360776 | None:intergenic | 35.0% | |
| TTTGTCAGTTTCCATATCCA+CGG | - | chr5_4:43360897-43360916 | Msa0852330:intron | 35.0% | |
| ! | CAACAATTTTTACCTCGTTG+TGG | + | chr5_4:43360967-43360986 | None:intergenic | 35.0% |
| CGAGGTAAAAATTGTTGAAC+TGG | - | chr5_4:43360970-43360989 | Msa0852330:intron | 35.0% | |
| GTAAAAATTGTTGAACTGGG+AGG | - | chr5_4:43360974-43360993 | Msa0852330:intron | 35.0% | |
| GATCGTATGTGGTTTAAAAG+TGG | - | chr5_4:43361118-43361137 | Msa0852330:intron | 35.0% | |
| TCCATAAACTGCGTAGTTGA+AGG | - | chr5_4:43354783-43354802 | Msa0852330:exon | 40.0% | |
| GTAGTTGAAGGCTGTTGAAA+AGG | - | chr5_4:43354795-43354814 | Msa0852330:CDS | 40.0% | |
| ! | GATATTTCTATCACCGTTGC+TGG | - | chr5_4:43354961-43354980 | Msa0852330:CDS | 40.0% |
| ATATACGACAAGATGTCGTC+GGG | + | chr5_4:43355428-43355447 | None:intergenic | 40.0% | |
| GATATACGACAAGATGTCGT+CGG | + | chr5_4:43355429-43355448 | None:intergenic | 40.0% | |
| CCACCTTCTAGATACTAAGA+TGG | + | chr5_4:43355486-43355505 | None:intergenic | 40.0% | |
| CCATCTTAGTATCTAGAAGG+TGG | - | chr5_4:43355483-43355502 | Msa0852330:intron | 40.0% | |
| AAATTCATGAGATACCTGGC+TGG | + | chr5_4:43355587-43355606 | None:intergenic | 40.0% | |
| AGGGAAATTCATGAGATACC+TGG | + | chr5_4:43355591-43355610 | None:intergenic | 40.0% | |
| !! | GAAACCCGAGTTTTGTGATA+GGG | + | chr5_4:43355610-43355629 | None:intergenic | 40.0% |
| !! | AGAAACCCGAGTTTTGTGAT+AGG | + | chr5_4:43355611-43355630 | None:intergenic | 40.0% |
| !! | CACAATCGTCGATTCTTTCA+TGG | - | chr5_4:43355718-43355737 | Msa0852330:intron | 40.0% |
| !! | GACAATTTTCAAGCCGAAGA+TGG | + | chr5_4:43355931-43355950 | None:intergenic | 40.0% |
| TACCGTGGATATATATGGTG+TGG | - | chr5_4:43356241-43356260 | Msa0852330:intron | 40.0% | |
| CGTGAACATTAATACCCCTA+TGG | - | chr5_4:43356273-43356292 | Msa0852330:intron | 40.0% | |
| GCATGTGGACATATATTCGA+CGG | - | chr5_4:43356381-43356400 | Msa0852330:intron | 40.0% | |
| !! | GAGTCATACAAGTCTTGTTC+AGG | - | chr5_4:43356477-43356496 | Msa0852330:intron | 40.0% |
| TCTGCAAAATAGGAGAAGCT+TGG | + | chr5_4:43356624-43356643 | None:intergenic | 40.0% | |
| TTAGTCATGGTGAGTGAACA+AGG | - | chr5_4:43356649-43356668 | Msa0852330:intron | 40.0% | |
| TATAAGGCCTAATCTTGGCA+TGG | - | chr5_4:43356871-43356890 | Msa0852330:intron | 40.0% | |
| ! | TGGACTATTTTCACCTCCAT+TGG | - | chr5_4:43357471-43357490 | Msa0852330:intron | 40.0% |
| TCATCAAAGAATAGACAGGC+AGG | + | chr5_4:43357646-43357665 | None:intergenic | 40.0% | |
| ! | AATGACGCTTTTAACCCCAA+CGG | - | chr5_4:43357705-43357724 | Msa0852330:intron | 40.0% |
| ACAATAGTTAACTGCCGTTG+GGG | + | chr5_4:43357722-43357741 | None:intergenic | 40.0% | |
| GACAATAGTTAACTGCCGTT+GGG | + | chr5_4:43357723-43357742 | None:intergenic | 40.0% | |
| TATTCATTCGTCAGCTTGAG+GGG | + | chr5_4:43358138-43358157 | None:intergenic | 40.0% | |
| GATATTCATTCGTCAGCTTG+AGG | + | chr5_4:43358140-43358159 | None:intergenic | 40.0% | |
| ! | CGATCATTCCTAACTTGCAA+AGG | - | chr5_4:43358159-43358178 | Msa0852330:intron | 40.0% |
| ! | TTCCTAACTTGCAAAGGTCA+TGG | - | chr5_4:43358165-43358184 | Msa0852330:intron | 40.0% |
| ! | CTCTTGTTGCTTACTCTTGA+TGG | + | chr5_4:43358549-43358568 | None:intergenic | 40.0% |
| GCAGATGAATCTATCTAGAC+AGG | + | chr5_4:43358618-43358637 | None:intergenic | 40.0% | |
| CAAAGAGACAAGAAGTCAGT+TGG | + | chr5_4:43358643-43358662 | None:intergenic | 40.0% | |
| TTTCCTCATCATCCATAGCT+TGG | - | chr5_4:43358705-43358724 | Msa0852330:intron | 40.0% | |
| !! | AATTCATTTCTGGAGTCGGT+CGG | - | chr5_4:43358905-43358924 | Msa0852330:intron | 40.0% |
| TTTGCAAGAATCAACACCCT+CGG | + | chr5_4:43358950-43358969 | None:intergenic | 40.0% | |
| TTCTTGCAAACCGAAGACAT+TGG | - | chr5_4:43358960-43358979 | Msa0852330:intron | 40.0% | |
| TCATAGTCCTCCAATGTCTT+CGG | + | chr5_4:43358973-43358992 | None:intergenic | 40.0% | |
| ACAATTGTAGACTCAGGTTC+AGG | - | chr5_4:43358993-43359012 | Msa0852330:intron | 40.0% | |
| !! | AACTAGGACTGACTCGAAAT+AGG | - | chr5_4:43359021-43359040 | Msa0852330:intron | 40.0% |
| GAACATGGATGAATGCTCTA+GGG | - | chr5_4:43359067-43359086 | Msa0852330:intron | 40.0% | |
| AGGACCAAGGATCAGAAAAT+CGG | - | chr5_4:43359095-43359114 | Msa0852330:intron | 40.0% | |
| TAACACTTCTTATTGGGGTG+AGG | + | chr5_4:43359456-43359475 | None:intergenic | 40.0% | |
| !! | AAAGAGCGCTATAGAACTGT+CGG | + | chr5_4:43359764-43359783 | None:intergenic | 40.0% |
| ! | GTTGCATGTTACTTGATGCA+TGG | - | chr5_4:43359844-43359863 | Msa0852330:CDS | 40.0% |
| TACTTGATGCATGGAAGTTG+AGG | - | chr5_4:43359853-43359872 | Msa0852330:CDS | 40.0% | |
| ACTTGATGCATGGAAGTTGA+GGG | - | chr5_4:43359854-43359873 | Msa0852330:CDS | 40.0% | |
| ATGGAAGTTGAGGGTGAAAT+TGG | - | chr5_4:43359863-43359882 | Msa0852330:CDS | 40.0% | |
| ATGCCTATGTTGCATAGGTA+CGG | - | chr5_4:43359951-43359970 | Msa0852330:CDS | 40.0% | |
| ATGCCTATGTTGCATAGGTA+CGG | - | chr5_4:43359951-43359970 | Msa0852330:CDS | 40.0% | |
| ATGCCTATGTTGCATAGGTA+CGG | - | chr5_4:43359951-43359970 | Msa0852330:CDS | 40.0% | |
| ! | TGCATGCATATCTGAAGCAT+GGG | + | chr5_4:43360771-43360790 | None:intergenic | 40.0% |
| ! | ATGCATGCATATCTGAAGCA+TGG | + | chr5_4:43360772-43360791 | None:intergenic | 40.0% |
| TTTACAAGGAACCGTGGATA+TGG | + | chr5_4:43360911-43360930 | None:intergenic | 40.0% | |
| ! | TTTTGCTTTACAAGGAACCG+TGG | + | chr5_4:43360917-43360936 | None:intergenic | 40.0% |
| !! | TAATAGTTCTGGGTCCCTAT+TGG | - | chr5_4:43361065-43361084 | Msa0852330:intron | 40.0% |
| !! | AATAGTTCTGGGTCCCTATT+GGG | - | chr5_4:43361066-43361085 | Msa0852330:intron | 40.0% |
| GAGTCATTTCCTTCCCAATA+GGG | + | chr5_4:43361082-43361101 | None:intergenic | 40.0% | |
| TGAGTCATTTCCTTCCCAAT+AGG | + | chr5_4:43361083-43361102 | None:intergenic | 40.0% | |
| TTGGGAAGGAAATGACTCAT+TGG | - | chr5_4:43361084-43361103 | Msa0852330:intron | 40.0% | |
| TGGGAAGGAAATGACTCATT+GGG | - | chr5_4:43361085-43361104 | Msa0852330:intron | 40.0% | |
| GATCGAATTCTGATCGTATG+TGG | - | chr5_4:43361107-43361126 | Msa0852330:intron | 40.0% | |
| CTTCAAGGCGAATTAGTAGT+GGG | - | chr5_4:43361163-43361182 | Msa0852330:intron | 40.0% | |
| ! | GCAGCATTTTCATAACTCGT+TGG | - | chr5_4:43361258-43361277 | Msa0852330:five_prime_UTR | 40.0% |
| GCCTTCAACTACGCAGTTTA+TGG | + | chr5_4:43354787-43354806 | None:intergenic | 45.0% | |
| GGCTTTCGACAAATCTTCCA+TGG | + | chr5_4:43355465-43355484 | None:intergenic | 45.0% | |
| !! | CTACGTTCATTGGTTTACCG+TGG | - | chr5_4:43356226-43356245 | Msa0852330:intron | 45.0% |
| AGTCGATGCTCTTCACCATA+GGG | + | chr5_4:43356291-43356310 | None:intergenic | 45.0% | |
| AAGTCGATGCTCTTCACCAT+AGG | + | chr5_4:43356292-43356311 | None:intergenic | 45.0% | |
| ! | GACGGTTAGTCATAAAGTGC+TGG | - | chr5_4:43356399-43356418 | Msa0852330:intron | 45.0% |
| AGATTTCCCAGCTCAAGGAA+AGG | + | chr5_4:43356558-43356577 | None:intergenic | 45.0% | |
| GCAAAATAGGAGAAGCTTGG+AGG | + | chr5_4:43356621-43356640 | None:intergenic | 45.0% | |
| TTTGACCTGTAGCACGTCAT+AGG | - | chr5_4:43356914-43356933 | Msa0852330:intron | 45.0% | |
| ATAAGCCTATGACGTGCTAC+AGG | + | chr5_4:43356922-43356941 | None:intergenic | 45.0% | |
| AACCTACGTGAAACCCAACT+AGG | + | chr5_4:43357426-43357445 | None:intergenic | 45.0% | |
| AGTTGGGTTTCACGTAGGTT+AGG | - | chr5_4:43357426-43357445 | Msa0852330:intron | 45.0% | |
| TTTCACGTAGGTTAGGTCGT+AGG | - | chr5_4:43357433-43357452 | Msa0852330:intron | 45.0% | |
| AAATAGTCCAGCCGATCGAT+AGG | + | chr5_4:43357461-43357480 | None:intergenic | 45.0% | |
| !! | GATAATGGGTGGATGACCAA+TGG | + | chr5_4:43357490-43357509 | None:intergenic | 45.0% |
| GGACAATAGTTAACTGCCGT+TGG | + | chr5_4:43357724-43357743 | None:intergenic | 45.0% | |
| CAACGGTAGTTAACTACAGC+TGG | + | chr5_4:43357771-43357790 | None:intergenic | 45.0% | |
| CAGCTGTAGTTAACTACCGT+TGG | - | chr5_4:43357769-43357788 | Msa0852330:intron | 45.0% | |
| CACCATGACCTTTGCAAGTT+AGG | + | chr5_4:43358170-43358189 | None:intergenic | 45.0% | |
| TCCACCTGTGAGACTAAAGT+CGG | - | chr5_4:43358219-43358238 | Msa0852330:intron | 45.0% | |
| ! | CAGACCCTTAGAGGTGTATA+TGG | + | chr5_4:43358254-43358273 | None:intergenic | 45.0% |
| ! | TACACCTCTAAGGGTCTGTT+TGG | - | chr5_4:43358256-43358275 | Msa0852330:intron | 45.0% |
| CAATCCAAACAGACCCTTAG+AGG | + | chr5_4:43358263-43358282 | None:intergenic | 45.0% | |
| ! | GATGAGGAAATGAGAGCACA+TGG | + | chr5_4:43358695-43358714 | None:intergenic | 45.0% |
| TTGCAAACCGAAGACATTGG+AGG | - | chr5_4:43358963-43358982 | Msa0852330:intron | 45.0% | |
| !! | TCAGGTTCAGGTGTTGAACT+AGG | - | chr5_4:43359005-43359024 | Msa0852330:intron | 45.0% |
| GGAACATGGATGAATGCTCT+AGG | - | chr5_4:43359066-43359085 | Msa0852330:intron | 45.0% | |
| !! | ATGAATGCTCTAGGGATGCT+AGG | - | chr5_4:43359075-43359094 | Msa0852330:intron | 45.0% |
| ! | GAGTCCGATTTTCTGATCCT+TGG | + | chr5_4:43359102-43359121 | None:intergenic | 45.0% |
| CAGAAAATCGGACTCAGACT+TGG | - | chr5_4:43359107-43359126 | Msa0852330:intron | 45.0% | |
| ! | CCTTCACGACATGTTAGTCT+CGG | - | chr5_4:43359531-43359550 | Msa0852330:intron | 45.0% |
| GGAGAATGCTAACAAAGGGT+AGG | - | chr5_4:43359664-43359683 | Msa0852330:CDS | 45.0% | |
| GAACATGGGATAGAGAGTGA+AGG | + | chr5_4:43359702-43359721 | None:intergenic | 45.0% | |
| GATGCATGCCTATGTTGCAT+AGG | - | chr5_4:43359946-43359965 | Msa0852330:CDS | 45.0% | |
| TGCCTATGTTGCATAGGTAC+GGG | - | chr5_4:43359952-43359971 | Msa0852330:CDS | 45.0% | |
| TACCCGTACCTATGCAACAT+AGG | + | chr5_4:43359957-43359976 | None:intergenic | 45.0% | |
| ATGTTGCATAGGTACGGGTA+CGG | - | chr5_4:43359957-43359976 | Msa0852330:CDS | 45.0% | |
| GATGCATGCCTATGTTGCAT+AGG | - | chr5_4:43359946-43359965 | Msa0852330:CDS | 45.0% | |
| TGCCTATGTTGCATAGGTAC+GGG | - | chr5_4:43359952-43359971 | Msa0852330:CDS | 45.0% | |
| TACCCGTACCTATGCAACAT+AGG | + | chr5_4:43359957-43359976 | None:intergenic | 45.0% | |
| ATGTTGCATAGGTACGGGTA+CGG | - | chr5_4:43359957-43359976 | Msa0852330:CDS | 45.0% | |
| GATGCATGCCTATGTTGCAT+AGG | - | chr5_4:43359946-43359965 | Msa0852330:CDS | 45.0% | |
| TGCCTATGTTGCATAGGTAC+GGG | - | chr5_4:43359952-43359971 | Msa0852330:CDS | 45.0% | |
| TACCCGTACCTATGCAACAT+AGG | + | chr5_4:43359957-43359976 | None:intergenic | 45.0% | |
| ATGTTGCATAGGTACGGGTA+CGG | - | chr5_4:43359957-43359976 | Msa0852330:CDS | 45.0% | |
| ! | AAACGGTGAAGTACCAGTAC+CGG | + | chr5_4:43360740-43360759 | None:intergenic | 45.0% |
| TGAAACATTCTCCCACAACG+AGG | - | chr5_4:43360952-43360971 | Msa0852330:intron | 45.0% | |
| GGTTTAAAAGTGGGCGTGAA+AGG | - | chr5_4:43361128-43361147 | Msa0852330:intron | 45.0% | |
| GCTTCAAGGCGAATTAGTAG+TGG | - | chr5_4:43361162-43361181 | Msa0852330:intron | 45.0% | |
| !!! | TTATAATTAATATTTGTTTT+AGG | - | chr5_4:43354752-43354771 | Msa0852330:three_prime_UTR | 5.0% |
| !!! | TATTCATATTTTATTAAAAT+AGG | - | chr5_4:43357317-43357336 | Msa0852330:intron | 5.0% |
| GGTGCAAGCTTTCTGCTCTA+AGG | - | chr5_4:43355504-43355523 | Msa0852330:intron | 50.0% | |
| AGAAGGAACTACTACCAGCC+AGG | - | chr5_4:43355570-43355589 | Msa0852330:intron | 50.0% | |
| GTCGATGCTCTTCACCATAG+GGG | + | chr5_4:43356290-43356309 | None:intergenic | 50.0% | |
| ACCTCATCCTTTCCTTGAGC+TGG | - | chr5_4:43356548-43356567 | Msa0852330:intron | 50.0% | |
| CCTCATCCTTTCCTTGAGCT+GGG | - | chr5_4:43356549-43356568 | Msa0852330:intron | 50.0% | |
| GTCCTAGTTGGGTTTCACGT+AGG | - | chr5_4:43357421-43357440 | Msa0852330:intron | 50.0% | |
| AATGGGTGGATGACCAATGG+AGG | + | chr5_4:43357487-43357506 | None:intergenic | 50.0% | |
| TGCAAAGGTCATGGTGTGCT+TGG | - | chr5_4:43358174-43358193 | Msa0852330:intron | 50.0% | |
| GCAAAGGTCATGGTGTGCTT+GGG | - | chr5_4:43358175-43358194 | Msa0852330:intron | 50.0% | |
| TCTCACAGGTGGAACCAACA+AGG | + | chr5_4:43358212-43358231 | None:intergenic | 50.0% | |
| CCACCTGTGAGACTAAAGTC+GGG | - | chr5_4:43358220-43358239 | Msa0852330:intron | 50.0% | |
| CATGGGAACATGGGGACTTA+GGG | + | chr5_4:43358490-43358509 | None:intergenic | 50.0% | |
| ACATGGGAACATGGGGACTT+AGG | + | chr5_4:43358491-43358510 | None:intergenic | 50.0% | |
| AAGTCCCCATGTTCCCATGT+TGG | - | chr5_4:43358491-43358510 | Msa0852330:intron | 50.0% | |
| CGTTCCAACATGGGAACATG+GGG | + | chr5_4:43358498-43358517 | None:intergenic | 50.0% | |
| GCGTTCCAACATGGGAACAT+GGG | + | chr5_4:43358499-43358518 | None:intergenic | 50.0% | |
| TGCGTTCCAACATGGGAACA+TGG | + | chr5_4:43358500-43358519 | None:intergenic | 50.0% | |
| GGTCCAAGCTATGGATGATG+AGG | + | chr5_4:43358711-43358730 | None:intergenic | 50.0% | |
| GGTCGGTGATACATTGGAGT+TGG | - | chr5_4:43358922-43358941 | Msa0852330:intron | 50.0% | |
| !! | ATACATTGGAGTTGGTGCCG+AGG | - | chr5_4:43358930-43358949 | Msa0852330:intron | 50.0% |
| !! | TACATTGGAGTTGGTGCCGA+GGG | - | chr5_4:43358931-43358950 | Msa0852330:intron | 50.0% |
| CTCGAAATAGGCGACAACTC+AGG | - | chr5_4:43359033-43359052 | Msa0852330:intron | 50.0% | |
| ATAGGCGACAACTCAGGTTC+AGG | - | chr5_4:43359039-43359058 | Msa0852330:intron | 50.0% | |
| GACAACTCAGGTTCAGGAGT+GGG | - | chr5_4:43359045-43359064 | Msa0852330:intron | 50.0% | |
| TTGGGGTGAGGCAGTTCTTA+CGG | + | chr5_4:43359444-43359463 | None:intergenic | 50.0% | |
| CCGAGACTAACATGTCGTGA+AGG | + | chr5_4:43359534-43359553 | None:intergenic | 50.0% | |
| ATAGAGAGTGAAGGCGATGG+TGG | + | chr5_4:43359693-43359712 | None:intergenic | 50.0% | |
| CTCAAAGGAACGCGGAACAT+GGG | + | chr5_4:43359716-43359735 | None:intergenic | 50.0% | |
| TCTCAAAGGAACGCGGAACA+TGG | + | chr5_4:43359717-43359736 | None:intergenic | 50.0% | |
| ! | AACGGTGAAGTACCAGTACC+GGG | + | chr5_4:43360739-43360758 | None:intergenic | 50.0% |
| TGTGCTTGGCAGCAGTGAGA+AGG | - | chr5_4:43355553-43355572 | Msa0852330:intron | 55.0% | |
| CCCAGCTCAAGGAAAGGATG+AGG | + | chr5_4:43356552-43356571 | None:intergenic | 55.0% | |
| GGTCGTAGGCTCCTATCGAT+CGG | - | chr5_4:43357447-43357466 | Msa0852330:intron | 55.0% | |
| TACAAGTTGCGACTCCGCGT+AGG | + | chr5_4:43357540-43357559 | None:intergenic | 55.0% | |
| GGGCAAACGACACACCTTGT+TGG | - | chr5_4:43358195-43358214 | Msa0852330:intron | 55.0% | |
| CCCGACTTTAGTCTCACAGG+TGG | + | chr5_4:43358223-43358242 | None:intergenic | 55.0% | |
| TCGCCCGACTTTAGTCTCAC+AGG | + | chr5_4:43358226-43358245 | None:intergenic | 55.0% | |
| GGAGTCGGTCGGTGATACAT+TGG | - | chr5_4:43358916-43358935 | Msa0852330:intron | 55.0% | |
| CGACAACTCAGGTTCAGGAG+TGG | - | chr5_4:43359044-43359063 | Msa0852330:intron | 55.0% | |
| CAGGTTCAGGAGTGGGAACA+TGG | - | chr5_4:43359052-43359071 | Msa0852330:intron | 55.0% | |
| ! | CTCTAGGGATGCTAGGACCA+AGG | - | chr5_4:43359082-43359101 | Msa0852330:intron | 55.0% |
| CGGGTCTCATCTCGAGTGTT+AGG | + | chr5_4:43359404-43359423 | None:intergenic | 55.0% | |
| GGGATAGAGAGTGAAGGCGA+TGG | + | chr5_4:43359696-43359715 | None:intergenic | 55.0% | |
| ATAGGTACGGGTACGGTACC+CGG | - | chr5_4:43359964-43359983 | Msa0852330:CDS | 55.0% | |
| ATAGGTACGGGTACGGTACC+CGG | - | chr5_4:43359964-43359983 | Msa0852330:CDS | 55.0% | |
| ATAGGTACGGGTACGGTACC+CGG | - | chr5_4:43359964-43359983 | Msa0852330:CDS | 55.0% | |
| ! | ACGAGTATCGTACGCGTACC+CGG | - | chr5_4:43360701-43360720 | Msa0852330:intron | 55.0% |
| TATCGTACGCGTACCCGGTA+TGG | - | chr5_4:43360706-43360725 | Msa0852330:intron | 55.0% | |
| ATCGTACGCGTACCCGGTAT+GGG | - | chr5_4:43360707-43360726 | Msa0852330:intron | 55.0% | |
| TACCGGGTACACACCCATAC+CGG | + | chr5_4:43360723-43360742 | None:intergenic | 55.0% | |
| TATGGGTGTGTACCCGGTAC+TGG | - | chr5_4:43360724-43360743 | Msa0852330:intron | 55.0% | |
| GTTGAACTGGGAGGTTGCGT+TGG | - | chr5_4:43360983-43361002 | Msa0852330:intron | 55.0% | |
| ! | TGGGAGGTTGCGTTGGCAAT+TGG | - | chr5_4:43360990-43361009 | Msa0852330:intron | 55.0% |
| ! | GTTCTGGGTCCCTATTGGGA+AGG | - | chr5_4:43361070-43361089 | Msa0852330:intron | 55.0% |
| GTAGGCTCCTATCGATCGGC+TGG | - | chr5_4:43357451-43357470 | Msa0852330:intron | 60.0% | |
| TACGGGTACGGTACCCGGTA+TGG | - | chr5_4:43359969-43359988 | Msa0852330:CDS | 60.0% | |
| TACGGGTACGGTACCCGGTA+TGG | - | chr5_4:43359969-43359988 | Msa0852330:CDS | 60.0% | |
| TACGGGTACGGTACCCGGTA+TGG | - | chr5_4:43359969-43359988 | Msa0852330:CDS | 60.0% | |
| GGGTACGCGTACGATACTCG+TGG | + | chr5_4:43360702-43360721 | None:intergenic | 60.0% | |
| ACCCGGTATGGGTGTGTACC+CGG | - | chr5_4:43360718-43360737 | Msa0852330:intron | 60.0% | |
| ACCGGGTACACACCCATACC+GGG | + | chr5_4:43360722-43360741 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 43354667 | 43361332 | 43354667 | ID=Msa0852330;Name=Msa0852330 |
| chr5_4 | mRNA | 43354667 | 43361332 | 43354667 | ID=Msa0852330-mRNA-1;Parent=Msa0852330;Name=Msa0852330-mRNA-1;_AED=0.03;_eAED=0.03;_QI=188|1|1|1|0.33|0.25|4|122|488 |
| chr5_4 | exon | 43354667 | 43355094 | 43354667 | ID=Msa0852330-mRNA-1:exon:13695;Parent=Msa0852330-mRNA-1 |
| chr5_4 | exon | 43359342 | 43359500 | 43359342 | ID=Msa0852330-mRNA-1:exon:13694;Parent=Msa0852330-mRNA-1 |
| chr5_4 | exon | 43359597 | 43360636 | 43359597 | ID=Msa0852330-mRNA-1:exon:13693;Parent=Msa0852330-mRNA-1 |
| chr5_4 | exon | 43361183 | 43361332 | 43361183 | ID=Msa0852330-mRNA-1:exon:13692;Parent=Msa0852330-mRNA-1 |
| chr5_4 | five_prime_UTR | 43361183 | 43361332 | 43361183 | ID=Msa0852330-mRNA-1:five_prime_utr;Parent=Msa0852330-mRNA-1 |
| chr5_4 | five_prime_UTR | 43360599 | 43360636 | 43360599 | ID=Msa0852330-mRNA-1:five_prime_utr;Parent=Msa0852330-mRNA-1 |
| chr5_4 | CDS | 43359597 | 43360598 | 43359597 | ID=Msa0852330-mRNA-1:cds;Parent=Msa0852330-mRNA-1 |
| chr5_4 | CDS | 43359342 | 43359500 | 43359342 | ID=Msa0852330-mRNA-1:cds;Parent=Msa0852330-mRNA-1 |
| chr5_4 | CDS | 43354789 | 43355094 | 43354789 | ID=Msa0852330-mRNA-1:cds;Parent=Msa0852330-mRNA-1 |
| chr5_4 | three_prime_UTR | 43354667 | 43354788 | 43354667 | ID=Msa0852330-mRNA-1:three_prime_utr;Parent=Msa0852330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
