AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0748080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0748080 MtrunA17_Chr5g0401271 94.618 353 18 1 1 352 1 353 0.0 656
Msa0748080 MtrunA17_Chr3g0134781 37.963 324 172 6 11 332 1 297 5.55e-61 198
Msa0748080 MtrunA17_Chr4g0054011 39.465 299 157 7 53 344 32 313 3.49e-56 186
Msa0748080 MtrunA17_Chr4g0041721 39.901 203 106 5 100 293 90 285 3.45e-38 139
Msa0748080 MtrunA17_Chr8g0364521 41.414 198 111 3 100 293 92 288 8.01e-37 136
Msa0748080 MtrunA17_Chr5g0414271 33.110 299 170 8 9 303 9 281 1.28e-36 135
Msa0748080 MtrunA17_Chr3g0133211 38.235 204 118 3 101 299 96 296 3.56e-35 131
Msa0748080 MtrunA17_Chr5g0412471 31.227 269 160 7 38 300 40 289 5.04e-32 122
Msa0748080 MtrunA17_Chr3g0134261 38.596 171 95 4 98 260 81 249 1.21e-31 122
Msa0748080 MtrunA17_Chr1g0208231 34.158 202 122 5 98 291 103 301 1.67e-30 119
Msa0748080 MtrunA17_Chr4g0053381 37.037 162 97 2 98 254 78 239 3.66e-30 118
Msa0748080 MtrunA17_Chr5g0427191 34.314 204 117 5 100 293 86 282 3.29e-27 110
Msa0748080 MtrunA17_Chr2g0323361 33.333 189 118 3 112 293 59 246 2.67e-26 106
Msa0748080 MtrunA17_Chr2g0280941 30.556 216 145 4 98 312 37 248 1.27e-24 100
Msa0748080 MtrunA17_Chr8g0367661 34.161 161 100 3 102 256 108 268 1.35e-21 94.7
Msa0748080 MtrunA17_Chr8g0370671 29.193 161 104 5 100 256 205 359 9.58e-15 75.1
Msa0748080 MtrunA17_Chr3g0103471 26.768 198 129 5 102 291 51 240 5.85e-13 68.6
Msa0748080 MtrunA17_Chr3g0102861 27.885 208 118 7 102 293 51 242 1.60e-12 67.0
Msa0748080 MtrunA17_Chr3g0102851 31.515 165 96 5 102 256 61 218 1.78e-12 67.0
Msa0748080 MtrunA17_Chr3g0102621 28.221 163 104 4 102 256 57 214 1.44e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0748080 AT4G37630.1 34.366 355 181 14 10 351 7 322 1.49e-49 169
Msa0748080 AT4G37630.2 37.809 283 137 10 10 281 7 261 1.44e-43 151
Msa0748080 AT4G37630.3 37.895 285 136 11 10 281 7 263 7.50e-42 147
Msa0748080 AT1G70210.1 37.879 198 118 3 100 292 80 277 8.66e-37 135
Msa0748080 AT5G67260.1 33.043 230 143 4 97 316 91 319 1.11e-35 133
Msa0748080 AT4G34160.1 33.058 242 137 5 54 291 59 279 2.27e-35 133
Msa0748080 AT5G67260.2 33.188 229 142 4 98 316 92 319 2.93e-35 133
Msa0748080 AT3G50070.1 31.313 297 164 11 6 291 11 278 3.66e-34 129
Msa0748080 AT2G22490.2 33.884 242 140 4 100 323 95 334 1.92e-30 119
Msa0748080 AT2G22490.1 34.298 242 138 5 100 323 95 333 2.16e-30 119
Msa0748080 AT5G10440.1 33.632 223 135 4 100 316 67 282 1.05e-29 115
Msa0748080 AT5G65420.1 36.585 164 99 2 98 256 74 237 4.03e-29 114
Msa0748080 AT5G65420.4 36.585 164 99 2 98 256 74 237 4.18e-29 113
Msa0748080 AT5G65420.3 34.483 174 99 3 98 256 74 247 6.94e-27 108
Msa0748080 AT5G10440.2 38.462 143 81 3 100 236 67 208 2.04e-26 105
Msa0748080 AT5G65420.2 37.500 144 85 2 98 236 74 217 5.13e-25 102
Msa0748080 AT4G03270.1 31.280 211 134 6 91 294 47 253 2.16e-24 101
Msa0748080 AT4G03270.2 31.280 211 133 7 91 294 47 252 1.79e-22 96.3
Msa0748080 AT5G02110.1 29.381 194 128 4 77 266 56 244 1.77e-20 91.3
Msa0748080 AT3G11520.2 29.747 158 93 5 106 256 195 341 6.17e-14 72.8
Msa0748080 AT1G20610.1 29.193 161 104 4 100 256 206 360 7.69e-14 72.8
Msa0748080 AT3G11520.1 29.747 158 93 5 106 256 195 341 9.30e-14 72.4
Msa0748080 AT4G37490.1 29.341 167 97 6 102 259 197 351 3.37e-13 70.9
Msa0748080 AT5G06150.1 25.620 242 139 9 100 313 210 438 1.94e-12 68.6
Msa0748080 AT5G06150.2 32.759 116 71 3 100 211 210 322 2.54e-12 67.4
Msa0748080 AT1G76310.4 33.333 117 70 4 100 211 206 319 4.98e-11 63.5
Msa0748080 AT4G35620.2 29.936 157 102 3 102 256 205 355 6.62e-11 63.5
Msa0748080 AT4G35620.1 28.758 153 101 3 106 256 209 355 8.44e-11 63.5

Find 81 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTACTTTGGAATGGAAAA+TGG 0.144972 5_2:+1123195 Msa0748080:CDS
ATATCTGAATCTGTTTATTT+TGG 0.162137 5_2:+1122225 Msa0748080:five_prime_UTR
ATGAGACTAGACAAAGAAAA+AGG 0.230920 5_2:-1122433 None:intergenic
ATTCAGACACAGGCAAAATT+TGG 0.232001 5_2:+1122852 Msa0748080:intron
TTCTCAAATCGATATTCTAT+TGG 0.241729 5_2:-1123139 None:intergenic
ATTCAAGCAAAAGCTTATTC+TGG 0.285826 5_2:+1122680 Msa0748080:CDS
TGATTCCACATTAACCAAAA+AGG 0.287348 5_2:+1123484 Msa0748080:CDS
TACAAGAAAATTAATTTGAT+TGG 0.298323 5_2:+1123909 Msa0748080:three_prime_UTR
ATAAACAGATTCAGATATAA+TGG 0.306266 5_2:-1122220 None:intergenic
CAAGAAACAGGACTTGGATT+TGG 0.320103 5_2:+1122601 Msa0748080:CDS
TTGCATTGAGAATGGGAAAA+TGG 0.327073 5_2:+1124456 Msa0748080:three_prime_UTR
ACCAATTCATCACTTACTAT+TGG 0.335003 5_2:-1124208 None:intergenic
GGAAGTGTTTGGAGAGAGGT+TGG 0.336860 5_2:-1122317 None:intergenic
GCCAATAGTAAGTGATGAAT+TGG 0.338121 5_2:+1124207 Msa0748080:three_prime_UTR
GATAAATAGTAGGAAGTGTT+TGG 0.392172 5_2:-1122328 None:intergenic
CAAGTGACTACCAAGAAGAT+AGG 0.393148 5_2:+1124084 Msa0748080:three_prime_UTR
AGTACTTTGGAATGGAAAAT+GGG 0.395838 5_2:+1123196 Msa0748080:CDS
CTCGTTTGCATGCTATTGAT+TGG 0.395951 5_2:+1122713 Msa0748080:CDS
TGCTTTCTATGAACTGAGAC+AGG 0.396932 5_2:+1124427 Msa0748080:three_prime_UTR
AATAATGTAAATAAGCAAAA+GGG 0.403818 5_2:-1123228 None:intergenic
TGATGGGTATGTGTAACAAT+TGG 0.410775 5_2:+1124491 Msa0748080:three_prime_UTR
AGTAGGAAGTGTTTGGAGAG+AGG 0.413686 5_2:-1122321 None:intergenic
ATTGGATTCTTATAGCCTAT+AGG 0.420765 5_2:+1123949 Msa0748080:three_prime_UTR
CTTCCTACTATTTATCACTT+AGG 0.422231 5_2:+1122335 Msa0748080:five_prime_UTR
TGAGTGGGAAGTTGCGGTTT+TGG 0.430187 5_2:-1122253 None:intergenic
TAAGAGAAAGCTTGGTTATG+AGG 0.430380 5_2:+1123795 Msa0748080:CDS
TCTTGATCCATTGCAGAACT+TGG 0.432680 5_2:-1123257 None:intergenic
AAATAATGTAAATAAGCAAA+AGG 0.437177 5_2:-1123229 None:intergenic
TAAACAGATTCAGATATAAT+GGG 0.441562 5_2:-1122219 None:intergenic
TATGCAGGAATCAAAACCTT+GGG 0.450693 5_2:+1123036 Msa0748080:intron
TATTTGTTCAAACAAGAAAC+AGG 0.453564 5_2:+1122589 Msa0748080:CDS
GTATGTGTAACAATTGGGTT+GGG 0.454424 5_2:+1124497 Msa0748080:three_prime_UTR
GTGTTTATTTAATTGCTGAT+TGG 0.457605 5_2:+1123931 Msa0748080:three_prime_UTR
GGGTTGCATTGCATTGAGAA+TGG 0.459417 5_2:+1124448 Msa0748080:three_prime_UTR
GATGGGTATGTGTAACAATT+GGG 0.473636 5_2:+1124492 Msa0748080:three_prime_UTR
GGTTGCATTGCATTGAGAAT+GGG 0.483838 5_2:+1124449 Msa0748080:three_prime_UTR
GGCTATTCAATTGTTGTCAG+TGG 0.484737 5_2:+1123057 Msa0748080:CDS
TTCTTCACCAAGTTCTGCAA+TGG 0.487684 5_2:+1123250 Msa0748080:CDS
AACAAATCTAATGCTTGTGC+AGG 0.488051 5_2:+1123769 Msa0748080:CDS
ATGTGTTAAGCTTACATCAA+TGG 0.491260 5_2:-1122937 None:intergenic
AGTGGATAGTAGTGAGTGAG+TGG 0.492301 5_2:-1122269 None:intergenic
GAACCTAAGTGATAAATAGT+AGG 0.494951 5_2:-1122338 None:intergenic
AGTGAGTGAGTGGGAAGTTG+CGG 0.495136 5_2:-1122259 None:intergenic
GCAGGAGTTAAGAGAAAGCT+TGG 0.497942 5_2:+1123787 Msa0748080:CDS
TTCAAACAAGAAACAGGACT+TGG 0.508140 5_2:+1122595 Msa0748080:CDS
AAGTGACTACCAAGAAGATA+GGG 0.510638 5_2:+1124085 Msa0748080:three_prime_UTR
TTATGCAGGAATCAAAACCT+TGG 0.516551 5_2:+1123035 Msa0748080:intron
GGTATGTGTAACAATTGGGT+TGG 0.524563 5_2:+1124496 Msa0748080:three_prime_UTR
CATAGAAAGCAAAGCATCCC+AGG 0.530619 5_2:-1124415 None:intergenic
TTGATCGGTTTCTTTCAAAA+CGG 0.532451 5_2:+1122913 Msa0748080:CDS
GTTGATAATAAATCCGATGA+AGG 0.534535 5_2:-1123715 None:intergenic
TGTAAATAAGCAAAAGGGGT+TGG 0.537019 5_2:-1123223 None:intergenic
ATCTTCTTCGAAGATGAGAG+TGG 0.541153 5_2:-1122476 None:intergenic
ATATTACTACTACTTGCACC+TGG 0.555722 5_2:+1124397 Msa0748080:three_prime_UTR
CACACAACACATTGTGACAT+TGG 0.560171 5_2:+1123303 Msa0748080:CDS
TCATCATCCAAAAGAAAACA+AGG 0.562862 5_2:-1122550 None:intergenic
TATAGAAGCAGATGCAATTG+TGG 0.569359 5_2:-1123450 None:intergenic
GTGGATAGTAGTGAGTGAGT+GGG 0.570794 5_2:-1122268 None:intergenic
TAAAAGCAAACACTATCACT+AGG 0.570917 5_2:-1124302 None:intergenic
GGTGTGATTAAGTGGAAGAG+TGG 0.572877 5_2:-1122287 None:intergenic
ATAATGTAAATAAGCAAAAG+GGG 0.575388 5_2:-1123227 None:intergenic
CTCAAAGTTAAGACTTGTCG+AGG 0.575523 5_2:-1122363 None:intergenic
AGTTAACAAGACACCTTCAT+CGG 0.576318 5_2:+1123702 Msa0748080:CDS
CACATTGTGACATTGGTCAA+AGG 0.589751 5_2:+1123310 Msa0748080:CDS
ATTAGTTTAATCTCATCATG+TGG 0.597891 5_2:+1123521 Msa0748080:CDS
TATGTGTAACAATTGGGTTG+GGG 0.605492 5_2:+1124498 Msa0748080:three_prime_UTR
GAAGCAGATGCAATTGTGGA+TGG 0.605514 5_2:-1123446 None:intergenic
GACAACAATTGAATAGCCCA+AGG 0.617594 5_2:-1123052 None:intergenic
TTGAAAGTTCACAAGGATTG+TGG 0.621197 5_2:+1124234 Msa0748080:three_prime_UTR
TGGTTGATTGAAAGTTCACA+AGG 0.621427 5_2:+1124227 Msa0748080:three_prime_UTR
GCTTTCTATGAACTGAGACA+GGG 0.625680 5_2:+1124428 Msa0748080:three_prime_UTR
AAAAGCAAACACTATCACTA+GGG 0.634483 5_2:-1124301 None:intergenic
GAACAAAGTTATCAAGAACA+TGG 0.639484 5_2:+1123159 Msa0748080:CDS
TCTATTGGATACTCTGATAG+CGG 0.651753 5_2:-1123124 None:intergenic
TATTACTACTACTTGCACCT+GGG 0.657737 5_2:+1124398 Msa0748080:three_prime_UTR
ATTGGATACTCTGATAGCGG+AGG 0.668359 5_2:-1123121 None:intergenic
AGTGACTACCAAGAAGATAG+GGG 0.671676 5_2:+1124086 Msa0748080:three_prime_UTR
CATCATCCAAAAGAAAACAA+GGG 0.678770 5_2:-1122549 None:intergenic
CAATGTCACAATGTGTTGTG+TGG 0.680959 5_2:-1123302 None:intergenic
AAAGTTCACAAGGATTGTGG+TGG 0.698939 5_2:+1124237 Msa0748080:three_prime_UTR
AGTGAAAGATGTTACATGAG+TGG 0.705842 5_2:+1124263 Msa0748080:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATCAATTAATTATTTTGAT+CGG + chr5_2:1122898-1122917 Msa0748080:CDS 10.0%
!!! TAATTTAATTTATTTTATGC+AGG + chr5_2:1123021-1123040 Msa0748080:intron 10.0%
!! AAAAGAAAGAAAAAAAAAAA+AGG + chr5_2:1124109-1124128 Msa0748080:three_prime_UTR 10.0%
!!! TATCAATTAATTATTTTGAT+CGG + chr5_2:1122898-1122917 Msa0748080:CDS 10.0%
!!! TAATTTAATTTATTTTATGC+AGG + chr5_2:1123021-1123040 Msa0748080:intron 10.0%
!! AAAAGAAAGAAAAAAAAAAA+AGG + chr5_2:1124109-1124128 Msa0748080:three_prime_UTR 10.0%
!!! AAAACAAATTTTGATTAGTT+TGG - chr5_2:1122762-1122781 None:intergenic 15.0%
!! AATAATGTAAATAAGCAAAA+GGG - chr5_2:1123231-1123250 None:intergenic 15.0%
!! AAATAATGTAAATAAGCAAA+AGG - chr5_2:1123232-1123251 None:intergenic 15.0%
!! TAAAAATCACAAACTAATTA+AGG - chr5_2:1123887-1123906 None:intergenic 15.0%
!!! TACAAGAAAATTAATTTGAT+TGG + chr5_2:1123909-1123928 Msa0748080:three_prime_UTR 15.0%
!!! AAAACAAATTTTGATTAGTT+TGG - chr5_2:1122762-1122781 None:intergenic 15.0%
!! AATAATGTAAATAAGCAAAA+GGG - chr5_2:1123231-1123250 None:intergenic 15.0%
!! AAATAATGTAAATAAGCAAA+AGG - chr5_2:1123232-1123251 None:intergenic 15.0%
!! TAAAAATCACAAACTAATTA+AGG - chr5_2:1123887-1123906 None:intergenic 15.0%
!!! TACAAGAAAATTAATTTGAT+TGG + chr5_2:1123909-1123928 Msa0748080:three_prime_UTR 15.0%
!! TAAACAGATTCAGATATAAT+GGG - chr5_2:1122222-1122241 None:intergenic 20.0%
!! ATAAACAGATTCAGATATAA+TGG - chr5_2:1122223-1122242 None:intergenic 20.0%
!!! ATATCTGAATCTGTTTATTT+TGG + chr5_2:1122225-1122244 Msa0748080:five_prime_UTR 20.0%
!! ATAATGTAAATAAGCAAAAG+GGG - chr5_2:1123230-1123249 None:intergenic 20.0%
!! AGAAACAAAAAATATCCTAT+AGG - chr5_2:1123967-1123986 None:intergenic 20.0%
!!! ATTAATTATTTTGTTGTGAC+TGG + chr5_2:1124365-1124384 Msa0748080:three_prime_UTR 20.0%
!! TAAACAGATTCAGATATAAT+GGG - chr5_2:1122222-1122241 None:intergenic 20.0%
!! ATAAACAGATTCAGATATAA+TGG - chr5_2:1122223-1122242 None:intergenic 20.0%
!!! ATATCTGAATCTGTTTATTT+TGG + chr5_2:1122225-1122244 Msa0748080:five_prime_UTR 20.0%
!! ATAATGTAAATAAGCAAAAG+GGG - chr5_2:1123230-1123249 None:intergenic 20.0%
!! AGAAACAAAAAATATCCTAT+AGG - chr5_2:1123967-1123986 None:intergenic 20.0%
!!! ATTAATTATTTTGTTGTGAC+TGG + chr5_2:1124365-1124384 Msa0748080:three_prime_UTR 20.0%
! TTTGTTCCAAATCAAAAACA+TGG + chr5_2:1122393-1122412 Msa0748080:exon 25.0%
! TTGTTCCAAATCAAAAACAT+GGG + chr5_2:1122394-1122413 Msa0748080:exon 25.0%
! TATTTGTTCAAACAAGAAAC+AGG + chr5_2:1122589-1122608 Msa0748080:CDS 25.0%
! ATAGCATAAAAAATGAGTGA+TGG - chr5_2:1122629-1122648 None:intergenic 25.0%
! AAAACAATGAAAGAGGAAAA+AGG - chr5_2:1122796-1122815 None:intergenic 25.0%
!!! TTTCCTCTTTCATTGTTTTT+TGG + chr5_2:1122797-1122816 Msa0748080:intron 25.0%
! TTTATCAATTGCAGCAAAAA+TGG + chr5_2:1123084-1123103 Msa0748080:CDS 25.0%
! TTCTCAAATCGATATTCTAT+TGG - chr5_2:1123142-1123161 None:intergenic 25.0%
!!! ACTTTTGATTTTGAGTACTT+TGG + chr5_2:1123183-1123202 Msa0748080:CDS 25.0%
!!! AATTTCCTTTTTGGTTAATG+TGG - chr5_2:1123492-1123511 None:intergenic 25.0%
!! ATTAGTTTAATCTCATCATG+TGG + chr5_2:1123521-1123540 Msa0748080:CDS 25.0%
!!! TTGTTTTTGTTTTATGCAAC+AGG + chr5_2:1123630-1123649 Msa0748080:intron 25.0%
! GTGTTTATTTAATTGCTGAT+TGG + chr5_2:1123931-1123950 Msa0748080:three_prime_UTR 25.0%
! AAATCATTCCACAAAAATAG+TGG - chr5_2:1124027-1124046 None:intergenic 25.0%
!!! ACTATTTTTGTGGAATGATT+TGG + chr5_2:1124026-1124045 Msa0748080:three_prime_UTR 25.0%
!!! GCATAAACTTTTTTGTTGTT+GGG - chr5_2:1124065-1124084 None:intergenic 25.0%
!!! TGCATAAACTTTTTTGTTGT+TGG - chr5_2:1124066-1124085 None:intergenic 25.0%
! TTTGTTCCAAATCAAAAACA+TGG + chr5_2:1122393-1122412 Msa0748080:exon 25.0%
! TTGTTCCAAATCAAAAACAT+GGG + chr5_2:1122394-1122413 Msa0748080:exon 25.0%
! TATTTGTTCAAACAAGAAAC+AGG + chr5_2:1122589-1122608 Msa0748080:CDS 25.0%
! ATAGCATAAAAAATGAGTGA+TGG - chr5_2:1122629-1122648 None:intergenic 25.0%
! AAAACAATGAAAGAGGAAAA+AGG - chr5_2:1122796-1122815 None:intergenic 25.0%
!!! TTTCCTCTTTCATTGTTTTT+TGG + chr5_2:1122797-1122816 Msa0748080:intron 25.0%
! TTTATCAATTGCAGCAAAAA+TGG + chr5_2:1123084-1123103 Msa0748080:CDS 25.0%
! TTCTCAAATCGATATTCTAT+TGG - chr5_2:1123142-1123161 None:intergenic 25.0%
!!! ACTTTTGATTTTGAGTACTT+TGG + chr5_2:1123183-1123202 Msa0748080:CDS 25.0%
!!! AATTTCCTTTTTGGTTAATG+TGG - chr5_2:1123492-1123511 None:intergenic 25.0%
!! ATTAGTTTAATCTCATCATG+TGG + chr5_2:1123521-1123540 Msa0748080:CDS 25.0%
!!! TTGTTTTTGTTTTATGCAAC+AGG + chr5_2:1123630-1123649 Msa0748080:intron 25.0%
! GTGTTTATTTAATTGCTGAT+TGG + chr5_2:1123931-1123950 Msa0748080:three_prime_UTR 25.0%
! AAATCATTCCACAAAAATAG+TGG - chr5_2:1124027-1124046 None:intergenic 25.0%
!!! ACTATTTTTGTGGAATGATT+TGG + chr5_2:1124026-1124045 Msa0748080:three_prime_UTR 25.0%
!!! GCATAAACTTTTTTGTTGTT+GGG - chr5_2:1124065-1124084 None:intergenic 25.0%
!!! TGCATAAACTTTTTTGTTGT+TGG - chr5_2:1124066-1124085 None:intergenic 25.0%
!!! TCTGAATCTGTTTATTTTGG+CGG + chr5_2:1122228-1122247 Msa0748080:five_prime_UTR 30.0%
!! GATAAATAGTAGGAAGTGTT+TGG - chr5_2:1122331-1122350 None:intergenic 30.0%
CTTCCTACTATTTATCACTT+AGG + chr5_2:1122335-1122354 Msa0748080:five_prime_UTR 30.0%
GAACCTAAGTGATAAATAGT+AGG - chr5_2:1122341-1122360 None:intergenic 30.0%
TGTTCCAAATCAAAAACATG+GGG + chr5_2:1122395-1122414 Msa0748080:exon 30.0%
TGAGACTAGACAAAGAAAAA+GGG - chr5_2:1122435-1122454 None:intergenic 30.0%
ATGAGACTAGACAAAGAAAA+AGG - chr5_2:1122436-1122455 None:intergenic 30.0%
!!! CAATAACCCTTGTTTTCTTT+TGG + chr5_2:1122543-1122562 Msa0748080:CDS 30.0%
CATCATCCAAAAGAAAACAA+GGG - chr5_2:1122552-1122571 None:intergenic 30.0%
TCATCATCCAAAAGAAAACA+AGG - chr5_2:1122553-1122572 None:intergenic 30.0%
ATTCAAGCAAAAGCTTATTC+TGG + chr5_2:1122680-1122699 Msa0748080:CDS 30.0%
CAACCAAAAAACAATGAAAG+AGG - chr5_2:1122803-1122822 None:intergenic 30.0%
!! TTATTTGTTGATTCAGACAC+AGG + chr5_2:1122842-1122861 Msa0748080:intron 30.0%
! TTGATCGGTTTCTTTCAAAA+CGG + chr5_2:1122913-1122932 Msa0748080:CDS 30.0%
ATGTGTTAAGCTTACATCAA+TGG - chr5_2:1122940-1122959 None:intergenic 30.0%
GAACAAAGTTATCAAGAACA+TGG + chr5_2:1123159-1123178 Msa0748080:CDS 30.0%
!! TGATTTTGAGTACTTTGGAA+TGG + chr5_2:1123188-1123207 Msa0748080:CDS 30.0%
!! AGTACTTTGGAATGGAAAAT+GGG + chr5_2:1123196-1123215 Msa0748080:CDS 30.0%
TGATTCCACATTAACCAAAA+AGG + chr5_2:1123484-1123503 Msa0748080:CDS 30.0%
CCAAAAAGGAAATTGATCTT+CGG + chr5_2:1123498-1123517 Msa0748080:CDS 30.0%
!! GTTGATAATAAATCCGATGA+AGG - chr5_2:1123718-1123737 None:intergenic 30.0%
GTTGATCCTCTCAAAAATTA+AGG - chr5_2:1123865-1123884 None:intergenic 30.0%
ATTGGATTCTTATAGCCTAT+AGG + chr5_2:1123949-1123968 Msa0748080:three_prime_UTR 30.0%
!!! AACATCATCCACTATTTTTG+TGG + chr5_2:1124016-1124035 Msa0748080:three_prime_UTR 30.0%
ACCAATTCATCACTTACTAT+TGG - chr5_2:1124211-1124230 None:intergenic 30.0%
AAAAGCAAACACTATCACTA+GGG - chr5_2:1124304-1124323 None:intergenic 30.0%
TAAAAGCAAACACTATCACT+AGG - chr5_2:1124305-1124324 None:intergenic 30.0%
!!! TCTGAATCTGTTTATTTTGG+CGG + chr5_2:1122228-1122247 Msa0748080:five_prime_UTR 30.0%
!! GATAAATAGTAGGAAGTGTT+TGG - chr5_2:1122331-1122350 None:intergenic 30.0%
CTTCCTACTATTTATCACTT+AGG + chr5_2:1122335-1122354 Msa0748080:five_prime_UTR 30.0%
GAACCTAAGTGATAAATAGT+AGG - chr5_2:1122341-1122360 None:intergenic 30.0%
TGTTCCAAATCAAAAACATG+GGG + chr5_2:1122395-1122414 Msa0748080:exon 30.0%
TGAGACTAGACAAAGAAAAA+GGG - chr5_2:1122435-1122454 None:intergenic 30.0%
ATGAGACTAGACAAAGAAAA+AGG - chr5_2:1122436-1122455 None:intergenic 30.0%
!!! CAATAACCCTTGTTTTCTTT+TGG + chr5_2:1122543-1122562 Msa0748080:CDS 30.0%
CATCATCCAAAAGAAAACAA+GGG - chr5_2:1122552-1122571 None:intergenic 30.0%
TCATCATCCAAAAGAAAACA+AGG - chr5_2:1122553-1122572 None:intergenic 30.0%
ATTCAAGCAAAAGCTTATTC+TGG + chr5_2:1122680-1122699 Msa0748080:CDS 30.0%
CAACCAAAAAACAATGAAAG+AGG - chr5_2:1122803-1122822 None:intergenic 30.0%
!! TTATTTGTTGATTCAGACAC+AGG + chr5_2:1122842-1122861 Msa0748080:intron 30.0%
! TTGATCGGTTTCTTTCAAAA+CGG + chr5_2:1122913-1122932 Msa0748080:CDS 30.0%
ATGTGTTAAGCTTACATCAA+TGG - chr5_2:1122940-1122959 None:intergenic 30.0%
GAACAAAGTTATCAAGAACA+TGG + chr5_2:1123159-1123178 Msa0748080:CDS 30.0%
!! TGATTTTGAGTACTTTGGAA+TGG + chr5_2:1123188-1123207 Msa0748080:CDS 30.0%
!! AGTACTTTGGAATGGAAAAT+GGG + chr5_2:1123196-1123215 Msa0748080:CDS 30.0%
TGATTCCACATTAACCAAAA+AGG + chr5_2:1123484-1123503 Msa0748080:CDS 30.0%
CCAAAAAGGAAATTGATCTT+CGG + chr5_2:1123498-1123517 Msa0748080:CDS 30.0%
!! GTTGATAATAAATCCGATGA+AGG - chr5_2:1123718-1123737 None:intergenic 30.0%
GTTGATCCTCTCAAAAATTA+AGG - chr5_2:1123865-1123884 None:intergenic 30.0%
ATTGGATTCTTATAGCCTAT+AGG + chr5_2:1123949-1123968 Msa0748080:three_prime_UTR 30.0%
!!! AACATCATCCACTATTTTTG+TGG + chr5_2:1124016-1124035 Msa0748080:three_prime_UTR 30.0%
ACCAATTCATCACTTACTAT+TGG - chr5_2:1124211-1124230 None:intergenic 30.0%
AAAAGCAAACACTATCACTA+GGG - chr5_2:1124304-1124323 None:intergenic 30.0%
TAAAAGCAAACACTATCACT+AGG - chr5_2:1124305-1124324 None:intergenic 30.0%
! GATTTTGTGGTGTGATTAAG+TGG - chr5_2:1122298-1122317 None:intergenic 35.0%
GTTCCAAATCAAAAACATGG+GGG + chr5_2:1122396-1122415 Msa0748080:exon 35.0%
TTCCAAATCAAAAACATGGG+GGG + chr5_2:1122397-1122416 Msa0748080:exon 35.0%
GAGACTAGACAAAGAAAAAG+GGG - chr5_2:1122434-1122453 None:intergenic 35.0%
TTCAAACAAGAAACAGGACT+TGG + chr5_2:1122595-1122614 Msa0748080:CDS 35.0%
ATTCAGACACAGGCAAAATT+TGG + chr5_2:1122852-1122871 Msa0748080:intron 35.0%
TTATGCAGGAATCAAAACCT+TGG + chr5_2:1123035-1123054 Msa0748080:intron 35.0%
TATGCAGGAATCAAAACCTT+GGG + chr5_2:1123036-1123055 Msa0748080:intron 35.0%
TCTATTGGATACTCTGATAG+CGG - chr5_2:1123127-1123146 None:intergenic 35.0%
!! GAGTACTTTGGAATGGAAAA+TGG + chr5_2:1123195-1123214 Msa0748080:CDS 35.0%
TGTAAATAAGCAAAAGGGGT+TGG - chr5_2:1123226-1123245 None:intergenic 35.0%
TATAGAAGCAGATGCAATTG+TGG - chr5_2:1123453-1123472 None:intergenic 35.0%
! CCGAAGATCAATTTCCTTTT+TGG - chr5_2:1123501-1123520 None:intergenic 35.0%
AGTTAACAAGACACCTTCAT+CGG + chr5_2:1123702-1123721 Msa0748080:CDS 35.0%
AACAAATCTAATGCTTGTGC+AGG + chr5_2:1123769-1123788 Msa0748080:CDS 35.0%
TAAGAGAAAGCTTGGTTATG+AGG + chr5_2:1123795-1123814 Msa0748080:CDS 35.0%
! AACATTGAAGATTTTCCTCC+AGG + chr5_2:1123823-1123842 Msa0748080:CDS 35.0%
!! CGTCAACCTTAATTTTTGAG+AGG + chr5_2:1123856-1123875 Msa0748080:exon 35.0%
AAGTGACTACCAAGAAGATA+GGG + chr5_2:1124085-1124104 Msa0748080:three_prime_UTR 35.0%
! TTTCTTTTCCCCTATCTTCT+TGG - chr5_2:1124097-1124116 None:intergenic 35.0%
GCCAATAGTAAGTGATGAAT+TGG + chr5_2:1124207-1124226 Msa0748080:three_prime_UTR 35.0%
TGGTTGATTGAAAGTTCACA+AGG + chr5_2:1124227-1124246 Msa0748080:three_prime_UTR 35.0%
TTGAAAGTTCACAAGGATTG+TGG + chr5_2:1124234-1124253 Msa0748080:three_prime_UTR 35.0%
AGTGAAAGATGTTACATGAG+TGG + chr5_2:1124263-1124282 Msa0748080:three_prime_UTR 35.0%
ATATTACTACTACTTGCACC+TGG + chr5_2:1124397-1124416 Msa0748080:three_prime_UTR 35.0%
TATTACTACTACTTGCACCT+GGG + chr5_2:1124398-1124417 Msa0748080:three_prime_UTR 35.0%
TTGCATTGAGAATGGGAAAA+TGG + chr5_2:1124456-1124475 Msa0748080:three_prime_UTR 35.0%
!!! AATGGTTTTGTGCGATTTGA+TGG + chr5_2:1124474-1124493 Msa0748080:three_prime_UTR 35.0%
!!! ATGGTTTTGTGCGATTTGAT+GGG + chr5_2:1124475-1124494 Msa0748080:three_prime_UTR 35.0%
! TGATGGGTATGTGTAACAAT+TGG + chr5_2:1124491-1124510 Msa0748080:three_prime_UTR 35.0%
GATGGGTATGTGTAACAATT+GGG + chr5_2:1124492-1124511 Msa0748080:three_prime_UTR 35.0%
GTATGTGTAACAATTGGGTT+GGG + chr5_2:1124497-1124516 Msa0748080:three_prime_UTR 35.0%
! TATGTGTAACAATTGGGTTG+GGG + chr5_2:1124498-1124517 Msa0748080:three_prime_UTR 35.0%
! GATTTTGTGGTGTGATTAAG+TGG - chr5_2:1122298-1122317 None:intergenic 35.0%
GTTCCAAATCAAAAACATGG+GGG + chr5_2:1122396-1122415 Msa0748080:exon 35.0%
TTCCAAATCAAAAACATGGG+GGG + chr5_2:1122397-1122416 Msa0748080:exon 35.0%
GAGACTAGACAAAGAAAAAG+GGG - chr5_2:1122434-1122453 None:intergenic 35.0%
TTCAAACAAGAAACAGGACT+TGG + chr5_2:1122595-1122614 Msa0748080:CDS 35.0%
ATTCAGACACAGGCAAAATT+TGG + chr5_2:1122852-1122871 Msa0748080:intron 35.0%
TTATGCAGGAATCAAAACCT+TGG + chr5_2:1123035-1123054 Msa0748080:intron 35.0%
TATGCAGGAATCAAAACCTT+GGG + chr5_2:1123036-1123055 Msa0748080:intron 35.0%
TCTATTGGATACTCTGATAG+CGG - chr5_2:1123127-1123146 None:intergenic 35.0%
!! GAGTACTTTGGAATGGAAAA+TGG + chr5_2:1123195-1123214 Msa0748080:CDS 35.0%
TGTAAATAAGCAAAAGGGGT+TGG - chr5_2:1123226-1123245 None:intergenic 35.0%
TATAGAAGCAGATGCAATTG+TGG - chr5_2:1123453-1123472 None:intergenic 35.0%
! CCGAAGATCAATTTCCTTTT+TGG - chr5_2:1123501-1123520 None:intergenic 35.0%
AGTTAACAAGACACCTTCAT+CGG + chr5_2:1123702-1123721 Msa0748080:CDS 35.0%
AACAAATCTAATGCTTGTGC+AGG + chr5_2:1123769-1123788 Msa0748080:CDS 35.0%
TAAGAGAAAGCTTGGTTATG+AGG + chr5_2:1123795-1123814 Msa0748080:CDS 35.0%
! AACATTGAAGATTTTCCTCC+AGG + chr5_2:1123823-1123842 Msa0748080:CDS 35.0%
!! CGTCAACCTTAATTTTTGAG+AGG + chr5_2:1123856-1123875 Msa0748080:exon 35.0%
AAGTGACTACCAAGAAGATA+GGG + chr5_2:1124085-1124104 Msa0748080:three_prime_UTR 35.0%
! TTTCTTTTCCCCTATCTTCT+TGG - chr5_2:1124097-1124116 None:intergenic 35.0%
GCCAATAGTAAGTGATGAAT+TGG + chr5_2:1124207-1124226 Msa0748080:three_prime_UTR 35.0%
TGGTTGATTGAAAGTTCACA+AGG + chr5_2:1124227-1124246 Msa0748080:three_prime_UTR 35.0%
TTGAAAGTTCACAAGGATTG+TGG + chr5_2:1124234-1124253 Msa0748080:three_prime_UTR 35.0%
AGTGAAAGATGTTACATGAG+TGG + chr5_2:1124263-1124282 Msa0748080:three_prime_UTR 35.0%
ATATTACTACTACTTGCACC+TGG + chr5_2:1124397-1124416 Msa0748080:three_prime_UTR 35.0%
TATTACTACTACTTGCACCT+GGG + chr5_2:1124398-1124417 Msa0748080:three_prime_UTR 35.0%
TTGCATTGAGAATGGGAAAA+TGG + chr5_2:1124456-1124475 Msa0748080:three_prime_UTR 35.0%
!!! AATGGTTTTGTGCGATTTGA+TGG + chr5_2:1124474-1124493 Msa0748080:three_prime_UTR 35.0%
!!! ATGGTTTTGTGCGATTTGAT+GGG + chr5_2:1124475-1124494 Msa0748080:three_prime_UTR 35.0%
! TGATGGGTATGTGTAACAAT+TGG + chr5_2:1124491-1124510 Msa0748080:three_prime_UTR 35.0%
GATGGGTATGTGTAACAATT+GGG + chr5_2:1124492-1124511 Msa0748080:three_prime_UTR 35.0%
GTATGTGTAACAATTGGGTT+GGG + chr5_2:1124497-1124516 Msa0748080:three_prime_UTR 35.0%
CTCAAAGTTAAGACTTGTCG+AGG - chr5_2:1122366-1122385 None:intergenic 40.0%
ATCTTCTTCGAAGATGAGAG+TGG - chr5_2:1122479-1122498 None:intergenic 40.0%
CAAGAAACAGGACTTGGATT+TGG + chr5_2:1122601-1122620 Msa0748080:CDS 40.0%
CTCGTTTGCATGCTATTGAT+TGG + chr5_2:1122713-1122732 Msa0748080:CDS 40.0%
GACAACAATTGAATAGCCCA+AGG - chr5_2:1123055-1123074 None:intergenic 40.0%
GGCTATTCAATTGTTGTCAG+TGG + chr5_2:1123057-1123076 Msa0748080:CDS 40.0%
TTCTTCACCAAGTTCTGCAA+TGG + chr5_2:1123250-1123269 Msa0748080:CDS 40.0%
TCTTGATCCATTGCAGAACT+TGG - chr5_2:1123260-1123279 None:intergenic 40.0%
CAATGTCACAATGTGTTGTG+TGG - chr5_2:1123305-1123324 None:intergenic 40.0%
CACACAACACATTGTGACAT+TGG + chr5_2:1123303-1123322 Msa0748080:CDS 40.0%
CACATTGTGACATTGGTCAA+AGG + chr5_2:1123310-1123329 Msa0748080:CDS 40.0%
! GTTTTCAACAACAACACTCG+TGG - chr5_2:1123752-1123771 None:intergenic 40.0%
CAAGTGACTACCAAGAAGAT+AGG + chr5_2:1124084-1124103 Msa0748080:three_prime_UTR 40.0%
AGTGACTACCAAGAAGATAG+GGG + chr5_2:1124086-1124105 Msa0748080:three_prime_UTR 40.0%
AAAGTTCACAAGGATTGTGG+TGG + chr5_2:1124237-1124256 Msa0748080:three_prime_UTR 40.0%
TGCTTTCTATGAACTGAGAC+AGG + chr5_2:1124427-1124446 Msa0748080:three_prime_UTR 40.0%
GCTTTCTATGAACTGAGACA+GGG + chr5_2:1124428-1124447 Msa0748080:three_prime_UTR 40.0%
GGTTGCATTGCATTGAGAAT+GGG + chr5_2:1124449-1124468 Msa0748080:three_prime_UTR 40.0%
GGTATGTGTAACAATTGGGT+TGG + chr5_2:1124496-1124515 Msa0748080:three_prime_UTR 40.0%
!! ATGTGTAACAATTGGGTTGG+GGG + chr5_2:1124499-1124518 Msa0748080:three_prime_UTR 40.0%
CTCAAAGTTAAGACTTGTCG+AGG - chr5_2:1122366-1122385 None:intergenic 40.0%
ATCTTCTTCGAAGATGAGAG+TGG - chr5_2:1122479-1122498 None:intergenic 40.0%
CAAGAAACAGGACTTGGATT+TGG + chr5_2:1122601-1122620 Msa0748080:CDS 40.0%
CTCGTTTGCATGCTATTGAT+TGG + chr5_2:1122713-1122732 Msa0748080:CDS 40.0%
GACAACAATTGAATAGCCCA+AGG - chr5_2:1123055-1123074 None:intergenic 40.0%
GGCTATTCAATTGTTGTCAG+TGG + chr5_2:1123057-1123076 Msa0748080:CDS 40.0%
TTCTTCACCAAGTTCTGCAA+TGG + chr5_2:1123250-1123269 Msa0748080:CDS 40.0%
TCTTGATCCATTGCAGAACT+TGG - chr5_2:1123260-1123279 None:intergenic 40.0%
CAATGTCACAATGTGTTGTG+TGG - chr5_2:1123305-1123324 None:intergenic 40.0%
CACACAACACATTGTGACAT+TGG + chr5_2:1123303-1123322 Msa0748080:CDS 40.0%
CACATTGTGACATTGGTCAA+AGG + chr5_2:1123310-1123329 Msa0748080:CDS 40.0%
! GTTTTCAACAACAACACTCG+TGG - chr5_2:1123752-1123771 None:intergenic 40.0%
CAAGTGACTACCAAGAAGAT+AGG + chr5_2:1124084-1124103 Msa0748080:three_prime_UTR 40.0%
AGTGACTACCAAGAAGATAG+GGG + chr5_2:1124086-1124105 Msa0748080:three_prime_UTR 40.0%
AAAGTTCACAAGGATTGTGG+TGG + chr5_2:1124237-1124256 Msa0748080:three_prime_UTR 40.0%
TGCTTTCTATGAACTGAGAC+AGG + chr5_2:1124427-1124446 Msa0748080:three_prime_UTR 40.0%
GCTTTCTATGAACTGAGACA+GGG + chr5_2:1124428-1124447 Msa0748080:three_prime_UTR 40.0%
GGTTGCATTGCATTGAGAAT+GGG + chr5_2:1124449-1124468 Msa0748080:three_prime_UTR 40.0%
GGTATGTGTAACAATTGGGT+TGG + chr5_2:1124496-1124515 Msa0748080:three_prime_UTR 40.0%
GTGGATAGTAGTGAGTGAGT+GGG - chr5_2:1122271-1122290 None:intergenic 45.0%
AGTGGATAGTAGTGAGTGAG+TGG - chr5_2:1122272-1122291 None:intergenic 45.0%
GGTGTGATTAAGTGGAAGAG+TGG - chr5_2:1122290-1122309 None:intergenic 45.0%
! TGGAGAGAGGTTGGATTTTG+TGG - chr5_2:1122311-1122330 None:intergenic 45.0%
!! AGTAGGAAGTGTTTGGAGAG+AGG - chr5_2:1122324-1122343 None:intergenic 45.0%
!! AGCCCCCCATGTTTTTGATT+TGG - chr5_2:1122402-1122421 None:intergenic 45.0%
AAAAACATGGGGGGCTATGT+TGG + chr5_2:1122406-1122425 Msa0748080:exon 45.0%
!! ATTGGATACTCTGATAGCGG+AGG - chr5_2:1123124-1123143 None:intergenic 45.0%
GAAGCAGATGCAATTGTGGA+TGG - chr5_2:1123449-1123468 None:intergenic 45.0%
GCAGGAGTTAAGAGAAAGCT+TGG + chr5_2:1123787-1123806 Msa0748080:CDS 45.0%
! CATAGAAAGCAAAGCATCCC+AGG - chr5_2:1124418-1124437 None:intergenic 45.0%
GGGTTGCATTGCATTGAGAA+TGG + chr5_2:1124448-1124467 Msa0748080:three_prime_UTR 45.0%
GTGGATAGTAGTGAGTGAGT+GGG - chr5_2:1122271-1122290 None:intergenic 45.0%
AGTGGATAGTAGTGAGTGAG+TGG - chr5_2:1122272-1122291 None:intergenic 45.0%
GGTGTGATTAAGTGGAAGAG+TGG - chr5_2:1122290-1122309 None:intergenic 45.0%
! TGGAGAGAGGTTGGATTTTG+TGG - chr5_2:1122311-1122330 None:intergenic 45.0%
!! AGTAGGAAGTGTTTGGAGAG+AGG - chr5_2:1122324-1122343 None:intergenic 45.0%
!! AGCCCCCCATGTTTTTGATT+TGG - chr5_2:1122402-1122421 None:intergenic 45.0%
AAAAACATGGGGGGCTATGT+TGG + chr5_2:1122406-1122425 Msa0748080:exon 45.0%
!! ATTGGATACTCTGATAGCGG+AGG - chr5_2:1123124-1123143 None:intergenic 45.0%
GAAGCAGATGCAATTGTGGA+TGG - chr5_2:1123449-1123468 None:intergenic 45.0%
GCAGGAGTTAAGAGAAAGCT+TGG + chr5_2:1123787-1123806 Msa0748080:CDS 45.0%
! CATAGAAAGCAAAGCATCCC+AGG - chr5_2:1124418-1124437 None:intergenic 45.0%
GGGTTGCATTGCATTGAGAA+TGG + chr5_2:1124448-1124467 Msa0748080:three_prime_UTR 45.0%
!!! TTTCATTTATTTATTTTTTT+TGG - chr5_2:1124166-1124185 None:intergenic 5.0%
!!! TTTCATTTATTTATTTTTTT+TGG - chr5_2:1124166-1124185 None:intergenic 5.0%
! TGAGTGGGAAGTTGCGGTTT+TGG - chr5_2:1122256-1122275 None:intergenic 50.0%
AGTGAGTGAGTGGGAAGTTG+CGG - chr5_2:1122262-1122281 None:intergenic 50.0%
!! GGAAGTGTTTGGAGAGAGGT+TGG - chr5_2:1122320-1122339 None:intergenic 50.0%
! TGACGTAGCTTTTGTCCTGG+AGG - chr5_2:1123841-1123860 None:intergenic 50.0%
! GGTTGACGTAGCTTTTGTCC+TGG - chr5_2:1123844-1123863 None:intergenic 50.0%
! TGAGTGGGAAGTTGCGGTTT+TGG - chr5_2:1122256-1122275 None:intergenic 50.0%
AGTGAGTGAGTGGGAAGTTG+CGG - chr5_2:1122262-1122281 None:intergenic 50.0%
!! GGAAGTGTTTGGAGAGAGGT+TGG - chr5_2:1122320-1122339 None:intergenic 50.0%
! TGACGTAGCTTTTGTCCTGG+AGG - chr5_2:1123841-1123860 None:intergenic 50.0%
! GGTTGACGTAGCTTTTGTCC+TGG - chr5_2:1123844-1123863 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 1122217 1124520 1122217 ID=Msa0748080;Name=Msa0748080
chr5_2 mRNA 1122217 1124520 1122217 ID=Msa0748080-mRNA-1;Parent=Msa0748080;Name=Msa0748080-mRNA-1;_AED=0.04;_eAED=0.04;_QI=195|1|1|1|1|1|5|653|352
chr5_2 exon 1122217 1122744 1122217 ID=Msa0748080-mRNA-1:exon:279;Parent=Msa0748080-mRNA-1
chr5_2 exon 1122858 1122944 1122858 ID=Msa0748080-mRNA-1:exon:280;Parent=Msa0748080-mRNA-1
chr5_2 exon 1123043 1123331 1123043 ID=Msa0748080-mRNA-1:exon:281;Parent=Msa0748080-mRNA-1
chr5_2 exon 1123423 1123556 1123423 ID=Msa0748080-mRNA-1:exon:282;Parent=Msa0748080-mRNA-1
chr5_2 exon 1123652 1124520 1123652 ID=Msa0748080-mRNA-1:exon:283;Parent=Msa0748080-mRNA-1
chr5_2 five_prime_UTR 1122217 1122411 1122217 ID=Msa0748080-mRNA-1:five_prime_utr;Parent=Msa0748080-mRNA-1
chr5_2 CDS 1122412 1122744 1122412 ID=Msa0748080-mRNA-1:cds;Parent=Msa0748080-mRNA-1
chr5_2 CDS 1122858 1122944 1122858 ID=Msa0748080-mRNA-1:cds;Parent=Msa0748080-mRNA-1
chr5_2 CDS 1123043 1123331 1123043 ID=Msa0748080-mRNA-1:cds;Parent=Msa0748080-mRNA-1
chr5_2 CDS 1123423 1123556 1123423 ID=Msa0748080-mRNA-1:cds;Parent=Msa0748080-mRNA-1
chr5_2 CDS 1123652 1123867 1123652 ID=Msa0748080-mRNA-1:cds;Parent=Msa0748080-mRNA-1
chr5_2 three_prime_UTR 1123868 1124520 1123868 ID=Msa0748080-mRNA-1:three_prime_utr;Parent=Msa0748080-mRNA-1
Gene Sequence

>Msa0748080

ATGGGGGGCTATGTTGGCACCCCTTTTTCTTTGTCTAGTCTCATGTGTCATGAACAAGATGAATCCACTCTCATCTTCGAAGAAGATGAAGATGAAAACGCTTTCTTCATTAACTCATCACTTGATAATAACAATAACCCTTGTTTTCTTTTGGATGATGAAGAAGAATACATTCAATATTTGTTCAAACAAGAAACAGGACTTGGATTTGGATCCATCACTCATTTTTTATGCTATGATGATCATGATGTTGATGTTGAAGATGATGATTCAAGCAAAAGCTTATTCTGGTTGAGAAATGCTCGTTTGCATGCTATTGATTGGATTTTCAATACACAGGCAAAATTTGGATTCTCAGTTCAAACAGCTTATTTATCAATTAATTATTTTGATCGGTTTCTTTCAAAACGGTCCATTGATGAATCAAAACCTTGGGCTATTCAATTGTTGTCAGTGGCATGTTTATCAATTGCAGCAAAAATGGAAGAACAAAGTGTTCCTCCGCTATCAGAGTATCCAATAGAATATCGATTTGAGAACAAAGTTATCAAGAACATGGAACTTTTGATTTTGAGTACTTTGGAATGGAAAATGGGATTACCAACCCCTTTTGCTTATTTACATTATTTCTTCACCAAGTTCTGCAATGGATCAAGATCAGAAATAATAATCACAAAAGCCACACAACACATTGTGACATTGGTCAAAGATTTTAATTTGATGAATCAACGACCATCCACAATTGCATCTGCTTCTATACTAGCAGCTTTTGATTCCACATTAACCAAAAAGGAAATTGATCTTCGGATTAGTTTAATCTCATCATGTGGAAATCTAGAAAATGAGCATGTATTTTCATGTTACAATGTTATACAAGAAAAGATGAGAAACAAAGTTAACAAGACACCTTCATCGGATTTATTATCAACAGAATCAAATTCCACGAGTGTTGTTGTTGAAAACAAATCTAATGCTTGTGCAGGAGTTAAGAGAAAGCTTGGTTATGAGGACATAAACATTGAAGATTTTCCTCCAGGACAAAAGCTACGTCAACCTTAA
Protein sequence

>Msa0748080

MGGYVGTPFSLSSLMCHEQDESTLIFEEDEDENAFFINSSLDNNNNPCFLLDDEEEYIQYLFKQETGLGFGSITHFLCYDDHDVDVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFSVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCNGSRSEIIITKATQHIVTLVKDFNLMNQRPSTIASASILAAFDSTLTKKEIDLRISLISSCGNLENEHVFSCYNVIQEKMRNKVNKTPSSDLLSTESNSTSVVVENKSNACAGVKRKLGYEDINIEDFPPGQKLRQP*