AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0753630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0753630 MtrunA17_Chr5g0397991 99.258 539 2 2 1 537 1 539 0.0 1075
Msa0753630 MtrunA17_Chr1g0203791 67.351 536 155 5 1 521 1 531 0.0 705
Msa0753630 MtrunA17_Chr6g0473701 65.769 520 157 4 12 526 89 592 0.0 674
Msa0753630 MtrunA17_Chr5g0428251 57.529 518 211 2 1 518 1 509 0.0 610
Msa0753630 MtrunA17_Chr3g0140931 55.827 532 208 5 32 536 13 544 0.0 588
Msa0753630 MtrunA17_Chr8g0389801 54.167 456 207 1 51 506 10 463 0.0 521
Msa0753630 MtrunA17_Chr4g0013031 52.371 464 218 2 64 524 66 529 3.13e-169 489
Msa0753630 MtrunA17_Chr6g0467321 46.318 516 251 7 18 518 4 508 4.54e-161 468
Msa0753630 MtrunA17_Chr2g0295631 43.305 478 251 4 63 521 19 495 1.83e-132 395
Msa0753630 MtrunA17_Chr6g0487091 53.049 328 145 2 192 519 87 405 2.98e-120 360
Msa0753630 MtrunA17_Chr6g0487091 48.101 79 41 0 47 125 10 88 8.47e-17 82.8
Msa0753630 MtrunA17_Chr6g0483381 35.430 477 300 3 42 513 5 478 1.08e-98 307
Msa0753630 MtrunA17_Chr8g0392601 36.283 452 272 7 61 504 9 452 1.15e-87 278
Msa0753630 MtrunA17_Chr6g0477961 33.753 477 308 3 42 513 5 478 4.25e-87 277
Msa0753630 MtrunA17_Chr6g0483361 33.407 455 301 1 52 504 13 467 6.71e-87 276
Msa0753630 MtrunA17_Chr6g0483341 33.626 455 293 3 64 513 41 491 3.56e-86 275
Msa0753630 MtrunA17_Chr1g0208791 33.056 481 305 6 47 519 27 498 2.90e-84 270
Msa0753630 MtrunA17_Chr1g0208821 32.895 456 300 2 52 504 29 481 7.91e-84 269
Msa0753630 MtrunA17_Chr6g0449061 32.359 479 303 8 34 504 6 471 3.09e-77 251
Msa0753630 MtrunA17_Chr2g0317131 32.657 493 308 5 25 514 16 487 1.99e-76 249
Msa0753630 MtrunA17_Chr6g0483331 31.674 442 301 1 64 504 12 453 5.51e-76 247
Msa0753630 MtrunA17_Chr7g0251331 31.568 472 308 6 53 515 16 481 3.69e-74 243
Msa0753630 MtrunA17_Chr6g0483351 33.947 380 249 1 123 500 1 380 5.70e-72 236
Msa0753630 MtrunA17_Chr2g0317161 32.484 471 300 5 61 527 28 484 6.96e-72 237
Msa0753630 MtrunA17_Chr2g0322671 29.730 444 311 1 72 514 60 503 3.43e-71 236
Msa0753630 MtrunA17_Chr1g0208891 33.406 458 295 4 63 515 23 475 6.89e-70 231
Msa0753630 MtrunA17_Chr2g0317151 34.086 443 269 5 61 492 30 460 4.81e-68 227
Msa0753630 MtrunA17_Chr4g0024501 28.222 450 322 1 65 513 65 514 2.32e-67 226
Msa0753630 MtrunA17_Chr8g0368001 28.932 515 331 10 18 516 16 511 3.36e-67 226
Msa0753630 MtrunA17_Chr2g0317171 31.423 471 305 5 61 527 34 490 1.34e-66 223
Msa0753630 MtrunA17_Chr1g0208881 31.866 477 313 6 40 510 1 471 2.49e-66 222
Msa0753630 MtrunA17_Chr6g0483161 33.952 377 230 2 122 498 2 359 8.42e-66 218
Msa0753630 MtrunA17_Chr2g0317221 32.439 410 259 5 122 527 9 404 5.23e-58 198
Msa0753630 MtrunA17_Chr5g0412541 29.075 454 318 3 65 516 37 488 8.76e-58 200
Msa0753630 MtrunA17_Chr6g0468521 27.984 486 337 4 40 517 1 481 1.13e-57 199
Msa0753630 MtrunA17_Chr2g0288281 29.551 379 267 0 126 504 4 382 5.76e-57 195
Msa0753630 MtrunA17_Chr1g0202761 28.958 480 321 7 51 526 34 497 2.51e-55 194
Msa0753630 MtrunA17_Chr7g0254521 27.887 459 322 3 64 518 31 484 1.05e-54 192
Msa0753630 MtrunA17_Chr5g0412771 26.719 509 347 7 18 519 21 510 2.84e-54 191
Msa0753630 MtrunA17_Chr6g0468531 29.158 487 331 5 40 517 1 482 3.91e-53 187
Msa0753630 MtrunA17_Chr5g0442331 31.222 442 292 5 87 523 69 503 4.62e-53 187
Msa0753630 MtrunA17_Chr1g0154441 29.211 380 264 3 127 504 5 381 2.28e-52 183
Msa0753630 MtrunA17_Chr6g0468511 28.298 470 324 4 40 501 1 465 2.46e-52 185
Msa0753630 MtrunA17_Chr7g0251321 30.750 400 244 7 123 515 1 374 3.32e-52 182
Msa0753630 MtrunA17_Chr7g0254511 26.696 457 325 4 64 516 30 480 2.20e-51 182
Msa0753630 MtrunA17_Chr3g0132531 25.646 503 355 7 31 520 6 502 3.40e-49 177
Msa0753630 MtrunA17_Chr5g0412571 30.075 399 272 6 122 516 39 434 7.16e-47 169
Msa0753630 MtrunA17_Chr7g0248051 26.419 458 313 2 65 511 71 515 3.77e-45 166
Msa0753630 MtrunA17_Chr7g0254531 27.089 395 287 1 123 517 1 394 7.04e-43 157
Msa0753630 MtrunA17_Chr6g0460541 25.553 407 283 2 122 519 4 399 3.02e-41 153
Msa0753630 MtrunA17_Chr5g0398571 31.879 298 196 4 220 513 2 296 5.39e-41 150
Msa0753630 MtrunA17_Chr3g0132541 22.131 488 317 6 34 514 4 435 9.55e-34 133
Msa0753630 MtrunA17_Chr6g0483264 36.139 202 125 2 303 502 1 200 1.03e-31 122
Msa0753630 MtrunA17_Chr8g0364761 33.468 248 158 5 87 330 76 320 5.67e-31 122
Msa0753630 MtrunA17_Chr7g0254501 24.281 313 235 2 207 519 1 311 4.67e-30 120
Msa0753630 MtrunA17_Chr6g0483241 32.778 180 121 0 122 301 2 181 7.54e-25 101
Msa0753630 MtrunA17_Chr5g0440661 27.324 355 193 8 123 476 1 291 9.45e-25 104
Msa0753630 MtrunA17_Chr6g0483261 37.419 155 93 2 350 502 6 158 1.12e-22 95.5
Msa0753630 MtrunA17_Chr6g0483221 36.913 149 94 0 350 498 6 154 2.44e-22 94.4
Msa0753630 MtrunA17_Chr6g0460531 30.085 236 158 4 53 285 13 244 3.31e-21 93.6
Msa0753630 MtrunA17_Chr8g0364751 31.138 167 111 2 350 514 19 183 1.72e-20 89.4
Msa0753630 MtrunA17_Chr5g0398551 52.381 84 40 0 60 143 39 122 2.33e-20 87.4
Msa0753630 MtrunA17_Chr5g0442311 31.395 172 118 0 126 297 4 175 2.98e-15 74.3
Msa0753630 MtrunA17_Chr6g0460521 24.537 216 163 0 303 518 4 219 3.76e-14 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0753630 AT4G23030.1 69.008 484 143 3 40 516 1 484 0.0 616
Msa0753630 AT1G58340.1 62.335 454 171 0 54 507 47 500 0.0 558
Msa0753630 AT4G29140.1 56.118 474 204 2 62 535 53 522 0.0 553
Msa0753630 AT5G52050.1 55.556 495 208 4 34 518 5 497 0.0 547
Msa0753630 AT5G19700.1 53.469 490 217 1 23 512 5 483 0.0 542
Msa0753630 AT2G38510.1 50.218 458 227 1 64 520 5 462 3.07e-169 488
Msa0753630 AT1G71870.1 46.735 490 243 3 47 518 6 495 1.93e-156 456
Msa0753630 AT5G49130.1 46.004 463 232 3 63 509 24 484 8.49e-134 398
Msa0753630 AT4G22790.1 40.851 470 264 10 56 518 21 483 1.33e-92 292
Msa0753630 AT1G71140.1 33.839 461 292 6 54 509 18 470 3.75e-82 265
Msa0753630 AT5G52450.1 33.874 493 299 7 39 522 11 485 8.27e-82 263
Msa0753630 AT2G04070.1 34.316 475 306 4 40 510 1 473 2.10e-81 262
Msa0753630 AT2G34360.1 34.016 488 290 10 37 514 5 470 6.41e-81 261
Msa0753630 AT1G73700.1 34.232 482 305 4 39 516 3 476 9.59e-81 260
Msa0753630 AT2G04080.1 33.262 469 306 3 40 504 1 466 3.61e-80 259
Msa0753630 AT2G04050.1 34.395 471 296 4 44 510 12 473 3.42e-78 254
Msa0753630 AT2G04080.2 32.903 465 305 3 40 500 1 462 9.59e-77 250
Msa0753630 AT1G15150.1 31.360 456 309 2 65 518 31 484 1.49e-75 247
Msa0753630 AT2G04040.1 32.506 443 293 2 65 504 27 466 1.53e-75 247
Msa0753630 AT1G15170.1 33.933 445 284 4 65 504 34 473 1.31e-74 244
Msa0753630 AT1G15160.1 31.590 478 319 3 47 518 9 484 2.76e-74 244
Msa0753630 AT2G04090.1 32.506 443 293 2 65 504 30 469 1.11e-72 239
Msa0753630 AT2G04100.1 32.506 443 293 2 65 504 30 469 1.82e-72 239
Msa0753630 AT1G66760.2 32.495 477 304 7 36 504 1 467 3.18e-72 238
Msa0753630 AT1G64820.1 31.590 478 306 6 61 523 25 496 5.57e-72 238
Msa0753630 AT1G61890.1 28.827 503 346 6 18 516 2 496 2.20e-71 237
Msa0753630 AT3G23550.1 33.260 454 292 3 47 497 18 463 7.73e-71 234
Msa0753630 AT2G04100.2 32.494 437 289 2 65 498 30 463 8.51e-70 231
Msa0753630 AT1G66760.1 32.272 471 301 7 36 498 1 461 8.51e-70 231
Msa0753630 AT1G66780.1 31.878 458 302 4 52 504 22 474 2.48e-68 228
Msa0753630 AT2G34360.2 31.134 485 266 8 37 514 5 428 3.89e-68 226
Msa0753630 AT1G11670.1 29.213 445 311 2 62 504 47 489 5.08e-68 228
Msa0753630 AT1G15180.1 31.799 478 316 4 31 504 3 474 5.24e-68 227
Msa0753630 AT1G61890.2 28.660 485 336 5 18 498 2 480 1.17e-67 227
Msa0753630 AT3G23560.1 34.845 419 263 5 63 476 37 450 3.16e-67 225
Msa0753630 AT3G21690.1 27.079 469 338 1 47 515 38 502 1.84e-64 218
Msa0753630 AT4G21910.3 27.701 509 342 5 24 513 2 503 7.38e-64 217
Msa0753630 AT4G21910.1 27.701 509 342 5 24 513 2 503 7.38e-64 217
Msa0753630 AT4G21910.2 29.111 450 317 2 65 513 57 505 2.16e-62 213
Msa0753630 AT4G21910.4 29.111 450 317 2 65 513 57 505 2.16e-62 213
Msa0753630 AT3G59030.1 29.630 459 315 2 61 515 47 501 4.70e-62 212
Msa0753630 AT3G26590.1 27.983 461 325 4 65 523 45 500 5.49e-62 212
Msa0753630 AT1G61890.3 30.402 398 277 0 65 462 47 444 1.80e-61 210
Msa0753630 AT1G15170.2 34.097 349 220 4 161 504 11 354 1.76e-59 201
Msa0753630 AT1G23300.1 28.235 510 339 9 18 518 5 496 5.08e-59 204
Msa0753630 AT5G38030.1 27.991 443 310 5 65 503 45 482 9.75e-59 203
Msa0753630 AT4G00350.1 26.233 507 362 4 13 518 44 539 3.71e-57 200
Msa0753630 AT4G21903.1 28.205 429 306 2 88 515 76 503 1.23e-56 197
Msa0753630 AT3G23560.2 34.682 346 219 3 63 405 37 378 4.91e-56 194
Msa0753630 AT1G12950.1 27.578 446 310 5 65 504 67 505 5.14e-56 196
Msa0753630 AT5G10420.1 31.140 456 302 5 65 512 38 489 1.22e-55 194
Msa0753630 AT3G26590.2 27.595 395 281 3 126 518 4 395 1.78e-55 192
Msa0753630 AT1G47530.1 26.316 475 337 6 37 503 3 472 2.84e-55 193
Msa0753630 AT1G15150.2 30.833 360 245 2 161 518 11 368 3.73e-55 190
Msa0753630 AT4G21903.3 28.571 392 279 1 126 516 4 395 3.94e-54 188
Msa0753630 AT5G44050.1 30.512 449 292 8 65 503 40 478 7.36e-54 190
Msa0753630 AT4G21903.2 27.703 444 308 4 88 531 76 506 1.44e-53 189
Msa0753630 AT1G66760.4 30.923 401 263 5 36 430 1 393 2.58e-52 183
Msa0753630 AT5G65380.1 30.258 466 306 9 47 502 18 474 3.35e-52 185
Msa0753630 AT1G33090.1 30.193 467 304 8 65 517 36 494 2.89e-51 183
Msa0753630 AT4G25640.1 29.011 455 317 2 64 514 33 485 2.99e-51 182
Msa0753630 AT4G25640.2 29.011 455 317 2 64 514 33 485 4.83e-51 182
Msa0753630 AT1G33100.1 28.726 463 316 6 65 517 33 491 1.94e-50 181
Msa0753630 AT1G33110.1 28.205 468 322 8 39 498 7 468 6.03e-49 176
Msa0753630 AT1G33080.1 26.767 467 334 4 37 498 5 468 1.32e-47 173
Msa0753630 AT1G33080.2 26.767 467 334 4 37 498 5 468 2.93e-47 172
Msa0753630 AT3G59030.2 30.749 374 251 2 61 430 47 416 1.36e-46 168
Msa0753630 AT1G47530.2 26.440 382 272 5 127 504 5 381 5.27e-46 166
Msa0753630 AT5G17700.2 26.105 475 333 9 39 504 7 472 5.58e-45 166
Msa0753630 AT5G17700.1 26.105 475 333 9 39 504 7 472 5.58e-45 166
Msa0753630 AT3G03620.2 26.596 470 330 7 64 526 36 497 1.25e-43 162
Msa0753630 AT3G03620.1 26.596 470 330 7 64 526 36 497 1.25e-43 162
Msa0753630 AT4G25640.3 28.784 403 285 1 64 466 33 433 4.52e-43 160
Msa0753630 AT1G66760.3 31.563 339 216 6 168 498 3 333 1.82e-41 152
Msa0753630 AT1G33110.2 27.569 399 279 6 39 431 7 401 1.67e-34 135
Msa0753630 AT1G15180.2 32.308 260 170 2 161 417 11 267 3.17e-34 134
Msa0753630 AT5G17700.3 25.978 358 251 7 39 388 7 358 1.19e-29 121
Msa0753630 AT2G04066.1 32.258 124 82 1 381 504 40 161 2.88e-14 71.2

Find 93 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATTTACATTTGGGTTTC+TGG 0.044651 5_2:+7265433 Msa0753630:CDS
AGGTTTGTGGTTTGGTCTTA+TGG 0.195458 5_2:+7266053 Msa0753630:CDS
TTTCCTTCTTCTTTGAGTTT+TGG 0.208924 5_2:+7265667 Msa0753630:CDS
TGTTTGAATGTTGGGGATTT+AGG 0.209468 5_2:-7264782 None:intergenic
TTAGGCGCAAATATAAATTT+AGG 0.214567 5_2:+7265964 Msa0753630:CDS
CCTATTTGTGGTCAAGCTTT+TGG 0.243633 5_2:+7265031 Msa0753630:CDS
TTGACAAGAAAATAGTTTAT+AGG 0.246031 5_2:-7265337 None:intergenic
GGTTACAATGTTGTTTGTTT+TGG 0.270469 5_2:+7266095 Msa0753630:CDS
TTTCGCTGATTATTTACATT+TGG 0.272638 5_2:+7265425 Msa0753630:CDS
ACATGCAACTGTTGCATCTA+TGG 0.280637 5_2:+7265609 Msa0753630:CDS
TTCGCTGATTATTTACATTT+GGG 0.298088 5_2:+7265426 Msa0753630:CDS
TTTATATTTGCGCCTAATTT+CGG 0.301593 5_2:-7265958 None:intergenic
GTTTGAATGTTGGGGATTTA+GGG 0.310488 5_2:-7264781 None:intergenic
TCTTGTCAATGTTCTTCAAT+TGG 0.313344 5_2:+7265351 Msa0753630:CDS
ATTGGATTTGCAAACATAAC+AGG 0.318839 5_2:+7264971 Msa0753630:CDS
GGAATAAGAGGAATCGCTTT+AGG 0.319468 5_2:+7265373 Msa0753630:CDS
AAAGTAGCACTGTATGTTAA+AGG 0.335720 5_2:-7265295 None:intergenic
CTTGTCAATGTTCTTCAATT+GGG 0.346715 5_2:+7265352 Msa0753630:CDS
GTTTGGTTGAGTTTCTTTGC+TGG 0.349890 5_2:+7266018 Msa0753630:CDS
GATTTCAAAGGTTTGTGGTT+TGG 0.352902 5_2:+7266045 Msa0753630:CDS
TCAATGGTGTTACCGATTAT+AGG 0.360217 5_2:+7265871 Msa0753630:CDS
GTTCTTCAATTGGGAATAAG+AGG 0.367653 5_2:+7265361 Msa0753630:CDS
CCAAAAGCTTGACCACAAAT+AGG 0.369074 5_2:-7265031 None:intergenic
CGTTTGCTATATCTTCTTGT+TGG 0.374870 5_2:-7265174 None:intergenic
TGCTATGTTTGAAATATGTT+TGG 0.394695 5_2:-7264843 None:intergenic
ATCATTTCAATGTTGTTCCT+TGG 0.403969 5_2:+7264908 Msa0753630:CDS
AATGATTGTGCTACAAGATC+AGG 0.410062 5_2:-7265226 None:intergenic
TTGTGGATATATTATTTGTT+TGG 0.410448 5_2:-7264706 None:intergenic
AGCAATTCCAAGCTGCATTT+CGG 0.410449 5_2:+7265525 Msa0753630:CDS
CTCTGGTCTTGCCATGGGAA+TGG 0.412093 5_2:+7265006 Msa0753630:CDS
GAAATCATGATTCTGCTTTG+TGG 0.415910 5_2:+7265571 Msa0753630:CDS
AATAATTGCTTTAACATCAA+TGG 0.417803 5_2:+7265855 Msa0753630:CDS
GAATCGCTTTAGGTTCCGTT+TGG 0.418185 5_2:+7265383 Msa0753630:CDS
GCTAAAAGATTCAAACTCCT+TGG 0.419870 5_2:+7265055 Msa0753630:CDS
GGAACAGCGAGGCCGAAATT+AGG 0.422373 5_2:+7265946 Msa0753630:CDS
AAACTCAACCAAACTGCAAC+AGG 0.430260 5_2:-7266009 None:intergenic
AGCTCACATAGTCCTATAAT+CGG 0.440906 5_2:-7265883 None:intergenic
GTATGTTAAAGGAAGTGTTA+TGG 0.441085 5_2:-7265284 None:intergenic
GCAGGTGGGTCACTTGCCAT+TGG 0.441197 5_2:+7264953 Msa0753630:CDS
CATTCTCTCTGGTCTTGCCA+TGG 0.443498 5_2:+7265000 Msa0753630:CDS
GCAAAACTTGCAGCAATAGT+TGG 0.450295 5_2:+7265739 Msa0753630:CDS
TTTGGTGTTTCAACAAGAGT+TGG 0.450548 5_2:+7265685 Msa0753630:CDS
GATGTTAAAGCAATTATTTG+TGG 0.453850 5_2:-7265850 None:intergenic
TGGGAATGCCTGTTGCAGTT+TGG 0.457141 5_2:+7266001 Msa0753630:CDS
GTTGGTGAGCTTGCTTTAGC+AGG 0.461842 5_2:+7264935 Msa0753630:CDS
ATCAACGGTGTTAACATGTC+AGG 0.462592 5_2:-7264758 None:intergenic
AAGGAACAACATTGAAATGA+TGG 0.463159 5_2:-7264906 None:intergenic
TTTGCTGGATTTGATTTCAA+AGG 0.464102 5_2:+7266033 Msa0753630:CDS
GATTTGATTTCAAAGGTTTG+TGG 0.465351 5_2:+7266040 Msa0753630:CDS
ATTCTCTCTGGTCTTGCCAT+GGG 0.465845 5_2:+7265001 Msa0753630:CDS
GGCTGCTCAAGGTTCATGTA+TGG 0.465974 5_2:+7266074 Msa0753630:CDS
TTAAAGGAAGTGTTATGGAT+TGG 0.467103 5_2:-7265279 None:intergenic
CGGTTTGTCTCGAATGGTGG+TGG 0.469476 5_2:+7265545 Msa0753630:CDS
CATGGCAAGACCAGAGAGAA+TGG 0.471209 5_2:-7264999 None:intergenic
GCATTTCGGTTTGTCTCGAA+TGG 0.473600 5_2:+7265539 Msa0753630:CDS
CCAAATGTTTCTAACAGAAA+AGG 0.479393 5_2:-7265806 None:intergenic
TTCAAACATAGCATTACCTA+TGG 0.482369 5_2:+7264853 Msa0753630:CDS
AATATGTTTGGCTTCATTGA+GGG 0.485509 5_2:-7264831 None:intergenic
TTCAAGTGAAGAAGAACAAG+AGG 0.495983 5_2:+7266173 Msa0753630:CDS
ACAGGTTACTCCATTCTCTC+TGG 0.501242 5_2:+7264989 Msa0753630:CDS
TTTGGTCTTATGGCTGCTCA+AGG 0.501334 5_2:+7266063 Msa0753630:CDS
ACACCACAAACAGTTGTTTG+TGG 0.502053 5_2:-7265916 None:intergenic
GTGAGCTTGCTTTAGCAGGT+GGG 0.506427 5_2:+7264939 Msa0753630:CDS
ACAAGAGTTGGAAATGAACT+TGG 0.513291 5_2:+7265697 Msa0753630:CDS
AAATATGTTTGGCTTCATTG+AGG 0.525906 5_2:-7264832 None:intergenic
ATTATAGGACTATGTGAGCT+TGG 0.533869 5_2:+7265886 Msa0753630:CDS
AATAAACCTGTTAAAACCAT+AGG 0.534613 5_2:-7264869 None:intergenic
CTTCGAAGATAGATTCTCAA+AGG 0.539810 5_2:-7265256 None:intergenic
CATGCAACTGTTGCATCTAT+GGG 0.545154 5_2:+7265610 Msa0753630:CDS
TGTCCACAAACAACTGTTTG+TGG 0.548402 5_2:+7265913 Msa0753630:CDS
ACACCAAAACTCAAAGAAGA+AGG 0.550180 5_2:-7265670 None:intergenic
AGACAAACCGAAATGCAGCT+TGG 0.556967 5_2:-7265532 None:intergenic
CTGGAACACACAAGAAAACA+TGG 0.559518 5_2:+7265452 Msa0753630:CDS
TTCTTTGCATTGTTAAACCA+AGG 0.562087 5_2:-7265072 None:intergenic
GGTGAGCTTGCTTTAGCAGG+TGG 0.562489 5_2:+7264938 Msa0753630:CDS
TTTCCATCCTTTAAAACAAG+CGG 0.568819 5_2:-7265488 None:intergenic
ATGTTGTTCCTTGGTCGTGT+TGG 0.573577 5_2:+7264917 Msa0753630:CDS
TGTTATGTTTGCAAATCCAA+TGG 0.576457 5_2:-7264969 None:intergenic
TTCGAAGATAGATTCTCAAA+GGG 0.581553 5_2:-7265255 None:intergenic
GAGGTTGAAATTCGTCCAAA+CGG 0.590488 5_2:-7265398 None:intergenic
GTTGGGGATTTAGGGATCAA+CGG 0.596686 5_2:-7264773 None:intergenic
CCATCCTTTAAAACAAGCGG+AGG 0.601348 5_2:-7265485 None:intergenic
ATTATCAATTCAAGTTCATG+TGG 0.602267 5_2:+7266207 Msa0753630:CDS
TTTCGGTTTGTCTCGAATGG+TGG 0.608886 5_2:+7265542 Msa0753630:CDS
ATGGGAATGGAACCTATTTG+TGG 0.610601 5_2:+7265019 Msa0753630:CDS
AAATCAAGCAGAGAGAGCTA+AGG 0.614779 5_2:+7266134 Msa0753630:CDS
ACAAATAGGTTCCATTCCCA+TGG 0.616628 5_2:-7265017 None:intergenic
ACACACAAGAAAACATGGAG+TGG 0.626414 5_2:+7265457 Msa0753630:CDS
CAAGCTCACCAACACGACCA+AGG 0.635498 5_2:-7264925 None:intergenic
TTCATACAAAGTAGAGACAG+AGG 0.657858 5_2:-7264672 None:intergenic
ATAGATGCAACAGTTGCATG+TGG 0.665559 5_2:-7265607 None:intergenic
TGATGATGATAACTTGCACA+TGG 0.742527 5_2:-7264645 None:intergenic
AAATAATCAGCGAAACAACG+AGG 0.748054 5_2:-7265417 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGTGGATATATTATTTGTT+TGG - chr5_2:7264709-7264728 None:intergenic 20.0%
!!! CAATTTTCATTTCATTCTTA+TGG + chr5_2:7265119-7265138 Msa0753630:CDS 20.0%
!! TTGACAAGAAAATAGTTTAT+AGG - chr5_2:7265340-7265359 None:intergenic 20.0%
!! AATAATTGCTTTAACATCAA+TGG + chr5_2:7265855-7265874 Msa0753630:CDS 20.0%
!! TTGTGGATATATTATTTGTT+TGG - chr5_2:7264709-7264728 None:intergenic 20.0%
!!! CAATTTTCATTTCATTCTTA+TGG + chr5_2:7265119-7265138 Msa0753630:CDS 20.0%
!! TTGACAAGAAAATAGTTTAT+AGG - chr5_2:7265340-7265359 None:intergenic 20.0%
!! AATAATTGCTTTAACATCAA+TGG + chr5_2:7265855-7265874 Msa0753630:CDS 20.0%
!!! ATTATTCTGTGTTTTGATTG+TGG - chr5_2:7264732-7264751 None:intergenic 25.0%
!!! TCTTTTGTTGTTTGAATGTT+GGG - chr5_2:7264793-7264812 None:intergenic 25.0%
!!! TTCTTTTGTTGTTTGAATGT+TGG - chr5_2:7264794-7264813 None:intergenic 25.0%
!! TGCTATGTTTGAAATATGTT+TGG - chr5_2:7264846-7264865 None:intergenic 25.0%
! AATAAACCTGTTAAAACCAT+AGG - chr5_2:7264872-7264891 None:intergenic 25.0%
!!! AAGAGATTATTGCTTTTATG+TGG + chr5_2:7265151-7265170 Msa0753630:CDS 25.0%
!! TTTCGCTGATTATTTACATT+TGG + chr5_2:7265425-7265444 Msa0753630:CDS 25.0%
!! TTCGCTGATTATTTACATTT+GGG + chr5_2:7265426-7265445 Msa0753630:CDS 25.0%
!! ATTATTTACATTTGGGTTTC+TGG + chr5_2:7265433-7265452 Msa0753630:CDS 25.0%
! AAAAATGTATATCAATGCAG+TGG - chr5_2:7265650-7265669 None:intergenic 25.0%
!! CTTTTCTGTTAGAAACATTT+GGG + chr5_2:7265807-7265826 Msa0753630:CDS 25.0%
! GATGTTAAAGCAATTATTTG+TGG - chr5_2:7265853-7265872 None:intergenic 25.0%
! TTTATATTTGCGCCTAATTT+CGG - chr5_2:7265961-7265980 None:intergenic 25.0%
! TTAGGCGCAAATATAAATTT+AGG + chr5_2:7265964-7265983 Msa0753630:CDS 25.0%
!!! TTTAGGTTGTTTTTATCTTG+TGG + chr5_2:7265981-7266000 Msa0753630:CDS 25.0%
!!! TTAGGTTGTTTTTATCTTGT+GGG + chr5_2:7265982-7266001 Msa0753630:CDS 25.0%
!! ATTATCAATTCAAGTTCATG+TGG + chr5_2:7266207-7266226 Msa0753630:CDS 25.0%
!!! ATTATTCTGTGTTTTGATTG+TGG - chr5_2:7264732-7264751 None:intergenic 25.0%
!!! TCTTTTGTTGTTTGAATGTT+GGG - chr5_2:7264793-7264812 None:intergenic 25.0%
!!! TTCTTTTGTTGTTTGAATGT+TGG - chr5_2:7264794-7264813 None:intergenic 25.0%
!! TGCTATGTTTGAAATATGTT+TGG - chr5_2:7264846-7264865 None:intergenic 25.0%
! AATAAACCTGTTAAAACCAT+AGG - chr5_2:7264872-7264891 None:intergenic 25.0%
!!! AAGAGATTATTGCTTTTATG+TGG + chr5_2:7265151-7265170 Msa0753630:CDS 25.0%
!! TTTCGCTGATTATTTACATT+TGG + chr5_2:7265425-7265444 Msa0753630:CDS 25.0%
!! TTCGCTGATTATTTACATTT+GGG + chr5_2:7265426-7265445 Msa0753630:CDS 25.0%
!! ATTATTTACATTTGGGTTTC+TGG + chr5_2:7265433-7265452 Msa0753630:CDS 25.0%
! AAAAATGTATATCAATGCAG+TGG - chr5_2:7265650-7265669 None:intergenic 25.0%
!! CTTTTCTGTTAGAAACATTT+GGG + chr5_2:7265807-7265826 Msa0753630:CDS 25.0%
! GATGTTAAAGCAATTATTTG+TGG - chr5_2:7265853-7265872 None:intergenic 25.0%
! TTTATATTTGCGCCTAATTT+CGG - chr5_2:7265961-7265980 None:intergenic 25.0%
! TTAGGCGCAAATATAAATTT+AGG + chr5_2:7265964-7265983 Msa0753630:CDS 25.0%
!!! TTTAGGTTGTTTTTATCTTG+TGG + chr5_2:7265981-7266000 Msa0753630:CDS 25.0%
!!! TTAGGTTGTTTTTATCTTGT+GGG + chr5_2:7265982-7266001 Msa0753630:CDS 25.0%
!! ATTATCAATTCAAGTTCATG+TGG + chr5_2:7266207-7266226 Msa0753630:CDS 25.0%
!!! CTTTTGTTGTTTGAATGTTG+GGG - chr5_2:7264792-7264811 None:intergenic 30.0%
! AATATGTTTGGCTTCATTGA+GGG - chr5_2:7264834-7264853 None:intergenic 30.0%
! AAATATGTTTGGCTTCATTG+AGG - chr5_2:7264835-7264854 None:intergenic 30.0%
TTCAAACATAGCATTACCTA+TGG + chr5_2:7264853-7264872 Msa0753630:CDS 30.0%
AAGGAACAACATTGAAATGA+TGG - chr5_2:7264909-7264928 None:intergenic 30.0%
ATCATTTCAATGTTGTTCCT+TGG + chr5_2:7264908-7264927 Msa0753630:CDS 30.0%
TGTTATGTTTGCAAATCCAA+TGG - chr5_2:7264972-7264991 None:intergenic 30.0%
ATTGGATTTGCAAACATAAC+AGG + chr5_2:7264971-7264990 Msa0753630:CDS 30.0%
TTCTTTGCATTGTTAAACCA+AGG - chr5_2:7265075-7265094 None:intergenic 30.0%
TTCGAAGATAGATTCTCAAA+GGG - chr5_2:7265258-7265277 None:intergenic 30.0%
!! TTAAAGGAAGTGTTATGGAT+TGG - chr5_2:7265282-7265301 None:intergenic 30.0%
!! GTATGTTAAAGGAAGTGTTA+TGG - chr5_2:7265287-7265306 None:intergenic 30.0%
AAAGTAGCACTGTATGTTAA+AGG - chr5_2:7265298-7265317 None:intergenic 30.0%
TCTTGTCAATGTTCTTCAAT+TGG + chr5_2:7265351-7265370 Msa0753630:CDS 30.0%
CTTGTCAATGTTCTTCAATT+GGG + chr5_2:7265352-7265371 Msa0753630:CDS 30.0%
!! TTTCCATCCTTTAAAACAAG+CGG - chr5_2:7265491-7265510 None:intergenic 30.0%
!! TTTCCTTCTTCTTTGAGTTT+TGG + chr5_2:7265667-7265686 Msa0753630:CDS 30.0%
!!! ACTCTGTTTCAGTTTTGTTT+TGG + chr5_2:7265762-7265781 Msa0753630:CDS 30.0%
!!! CTCTGTTTCAGTTTTGTTTT+GGG + chr5_2:7265763-7265782 Msa0753630:CDS 30.0%
! CCAAATGTTTCTAACAGAAA+AGG - chr5_2:7265809-7265828 None:intergenic 30.0%
! CCTTTTCTGTTAGAAACATT+TGG + chr5_2:7265806-7265825 Msa0753630:CDS 30.0%
! TTTGCTGGATTTGATTTCAA+AGG + chr5_2:7266033-7266052 Msa0753630:CDS 30.0%
! GATTTGATTTCAAAGGTTTG+TGG + chr5_2:7266040-7266059 Msa0753630:CDS 30.0%
!! GGTTACAATGTTGTTTGTTT+TGG + chr5_2:7266095-7266114 Msa0753630:CDS 30.0%
!!! TTGTTTTGGTTCGTACAAAT+TGG + chr5_2:7266109-7266128 Msa0753630:CDS 30.0%
!!! TGTTTTGGTTCGTACAAATT+GGG + chr5_2:7266110-7266129 Msa0753630:CDS 30.0%
!!! CTTTTGTTGTTTGAATGTTG+GGG - chr5_2:7264792-7264811 None:intergenic 30.0%
! AATATGTTTGGCTTCATTGA+GGG - chr5_2:7264834-7264853 None:intergenic 30.0%
! AAATATGTTTGGCTTCATTG+AGG - chr5_2:7264835-7264854 None:intergenic 30.0%
TTCAAACATAGCATTACCTA+TGG + chr5_2:7264853-7264872 Msa0753630:CDS 30.0%
AAGGAACAACATTGAAATGA+TGG - chr5_2:7264909-7264928 None:intergenic 30.0%
ATCATTTCAATGTTGTTCCT+TGG + chr5_2:7264908-7264927 Msa0753630:CDS 30.0%
TGTTATGTTTGCAAATCCAA+TGG - chr5_2:7264972-7264991 None:intergenic 30.0%
ATTGGATTTGCAAACATAAC+AGG + chr5_2:7264971-7264990 Msa0753630:CDS 30.0%
TTCTTTGCATTGTTAAACCA+AGG - chr5_2:7265075-7265094 None:intergenic 30.0%
TTCGAAGATAGATTCTCAAA+GGG - chr5_2:7265258-7265277 None:intergenic 30.0%
!! TTAAAGGAAGTGTTATGGAT+TGG - chr5_2:7265282-7265301 None:intergenic 30.0%
!! GTATGTTAAAGGAAGTGTTA+TGG - chr5_2:7265287-7265306 None:intergenic 30.0%
AAAGTAGCACTGTATGTTAA+AGG - chr5_2:7265298-7265317 None:intergenic 30.0%
TCTTGTCAATGTTCTTCAAT+TGG + chr5_2:7265351-7265370 Msa0753630:CDS 30.0%
CTTGTCAATGTTCTTCAATT+GGG + chr5_2:7265352-7265371 Msa0753630:CDS 30.0%
!! TTTCCATCCTTTAAAACAAG+CGG - chr5_2:7265491-7265510 None:intergenic 30.0%
!! TTTCCTTCTTCTTTGAGTTT+TGG + chr5_2:7265667-7265686 Msa0753630:CDS 30.0%
!!! ACTCTGTTTCAGTTTTGTTT+TGG + chr5_2:7265762-7265781 Msa0753630:CDS 30.0%
!!! CTCTGTTTCAGTTTTGTTTT+GGG + chr5_2:7265763-7265782 Msa0753630:CDS 30.0%
! CCAAATGTTTCTAACAGAAA+AGG - chr5_2:7265809-7265828 None:intergenic 30.0%
! CCTTTTCTGTTAGAAACATT+TGG + chr5_2:7265806-7265825 Msa0753630:CDS 30.0%
! TTTGCTGGATTTGATTTCAA+AGG + chr5_2:7266033-7266052 Msa0753630:CDS 30.0%
! GATTTGATTTCAAAGGTTTG+TGG + chr5_2:7266040-7266059 Msa0753630:CDS 30.0%
!! GGTTACAATGTTGTTTGTTT+TGG + chr5_2:7266095-7266114 Msa0753630:CDS 30.0%
!!! TTGTTTTGGTTCGTACAAAT+TGG + chr5_2:7266109-7266128 Msa0753630:CDS 30.0%
!!! TGTTTTGGTTCGTACAAATT+GGG + chr5_2:7266110-7266129 Msa0753630:CDS 30.0%
TTCATACAAAGTAGAGACAG+AGG - chr5_2:7264675-7264694 None:intergenic 35.0%
GTTTGAATGTTGGGGATTTA+GGG - chr5_2:7264784-7264803 None:intergenic 35.0%
TGTTTGAATGTTGGGGATTT+AGG - chr5_2:7264785-7264804 None:intergenic 35.0%
ATTGAGGGCAAGAGAAAAAT+GGG - chr5_2:7264819-7264838 None:intergenic 35.0%
!!! GCATTACCTATGGTTTTAAC+AGG + chr5_2:7264863-7264882 Msa0753630:CDS 35.0%
GCTAAAAGATTCAAACTCCT+TGG + chr5_2:7265055-7265074 Msa0753630:CDS 35.0%
!! CGTTTGCTATATCTTCTTGT+TGG - chr5_2:7265177-7265196 None:intergenic 35.0%
AATGATTGTGCTACAAGATC+AGG - chr5_2:7265229-7265248 None:intergenic 35.0%
CTTCGAAGATAGATTCTCAA+AGG - chr5_2:7265259-7265278 None:intergenic 35.0%
GTTCTTCAATTGGGAATAAG+AGG + chr5_2:7265361-7265380 Msa0753630:CDS 35.0%
AAATAATCAGCGAAACAACG+AGG - chr5_2:7265420-7265439 None:intergenic 35.0%
!!! ATTTCCTCCGCTTGTTTTAA+AGG + chr5_2:7265481-7265500 Msa0753630:CDS 35.0%
GAAATCATGATTCTGCTTTG+TGG + chr5_2:7265571-7265590 Msa0753630:CDS 35.0%
ACACCAAAACTCAAAGAAGA+AGG - chr5_2:7265673-7265692 None:intergenic 35.0%
!! TTTGGTGTTTCAACAAGAGT+TGG + chr5_2:7265685-7265704 Msa0753630:CDS 35.0%
ACAAGAGTTGGAAATGAACT+TGG + chr5_2:7265697-7265716 Msa0753630:CDS 35.0%
!!! CTGCAAGTTTTGCTTTTTGT+GGG - chr5_2:7265732-7265751 None:intergenic 35.0%
AGAAAAGGCGAAAAACAAAG+CGG - chr5_2:7265794-7265813 None:intergenic 35.0%
!! TCAATGGTGTTACCGATTAT+AGG + chr5_2:7265871-7265890 Msa0753630:CDS 35.0%
AGCTCACATAGTCCTATAAT+CGG - chr5_2:7265886-7265905 None:intergenic 35.0%
ATTATAGGACTATGTGAGCT+TGG + chr5_2:7265886-7265905 Msa0753630:CDS 35.0%
!! AACTGTTTGTGGTGTTTTGA+GGG + chr5_2:7265924-7265943 Msa0753630:CDS 35.0%
GATTTCAAAGGTTTGTGGTT+TGG + chr5_2:7266045-7266064 Msa0753630:CDS 35.0%
TTCAAGTGAAGAAGAACAAG+AGG + chr5_2:7266173-7266192 Msa0753630:CDS 35.0%
TTCATACAAAGTAGAGACAG+AGG - chr5_2:7264675-7264694 None:intergenic 35.0%
GTTTGAATGTTGGGGATTTA+GGG - chr5_2:7264784-7264803 None:intergenic 35.0%
TGTTTGAATGTTGGGGATTT+AGG - chr5_2:7264785-7264804 None:intergenic 35.0%
ATTGAGGGCAAGAGAAAAAT+GGG - chr5_2:7264819-7264838 None:intergenic 35.0%
!!! GCATTACCTATGGTTTTAAC+AGG + chr5_2:7264863-7264882 Msa0753630:CDS 35.0%
GCTAAAAGATTCAAACTCCT+TGG + chr5_2:7265055-7265074 Msa0753630:CDS 35.0%
!! CGTTTGCTATATCTTCTTGT+TGG - chr5_2:7265177-7265196 None:intergenic 35.0%
AATGATTGTGCTACAAGATC+AGG - chr5_2:7265229-7265248 None:intergenic 35.0%
CTTCGAAGATAGATTCTCAA+AGG - chr5_2:7265259-7265278 None:intergenic 35.0%
GTTCTTCAATTGGGAATAAG+AGG + chr5_2:7265361-7265380 Msa0753630:CDS 35.0%
AAATAATCAGCGAAACAACG+AGG - chr5_2:7265420-7265439 None:intergenic 35.0%
!!! ATTTCCTCCGCTTGTTTTAA+AGG + chr5_2:7265481-7265500 Msa0753630:CDS 35.0%
GAAATCATGATTCTGCTTTG+TGG + chr5_2:7265571-7265590 Msa0753630:CDS 35.0%
ACACCAAAACTCAAAGAAGA+AGG - chr5_2:7265673-7265692 None:intergenic 35.0%
!! TTTGGTGTTTCAACAAGAGT+TGG + chr5_2:7265685-7265704 Msa0753630:CDS 35.0%
ACAAGAGTTGGAAATGAACT+TGG + chr5_2:7265697-7265716 Msa0753630:CDS 35.0%
!!! CTGCAAGTTTTGCTTTTTGT+GGG - chr5_2:7265732-7265751 None:intergenic 35.0%
AGAAAAGGCGAAAAACAAAG+CGG - chr5_2:7265794-7265813 None:intergenic 35.0%
!! TCAATGGTGTTACCGATTAT+AGG + chr5_2:7265871-7265890 Msa0753630:CDS 35.0%
AGCTCACATAGTCCTATAAT+CGG - chr5_2:7265886-7265905 None:intergenic 35.0%
ATTATAGGACTATGTGAGCT+TGG + chr5_2:7265886-7265905 Msa0753630:CDS 35.0%
!! AACTGTTTGTGGTGTTTTGA+GGG + chr5_2:7265924-7265943 Msa0753630:CDS 35.0%
GATTTCAAAGGTTTGTGGTT+TGG + chr5_2:7266045-7266064 Msa0753630:CDS 35.0%
TTCAAGTGAAGAAGAACAAG+AGG + chr5_2:7266173-7266192 Msa0753630:CDS 35.0%
!!! CTGTGTTTTGATTGTGGTTG+TGG - chr5_2:7264726-7264745 None:intergenic 40.0%
! ATCAACGGTGTTAACATGTC+AGG - chr5_2:7264761-7264780 None:intergenic 40.0%
CATTGAGGGCAAGAGAAAAA+TGG - chr5_2:7264820-7264839 None:intergenic 40.0%
ACAAATAGGTTCCATTCCCA+TGG - chr5_2:7265020-7265039 None:intergenic 40.0%
ATGGGAATGGAACCTATTTG+TGG + chr5_2:7265019-7265038 Msa0753630:CDS 40.0%
CCAAAAGCTTGACCACAAAT+AGG - chr5_2:7265034-7265053 None:intergenic 40.0%
! CCTATTTGTGGTCAAGCTTT+TGG + chr5_2:7265031-7265050 Msa0753630:CDS 40.0%
GGAATAAGAGGAATCGCTTT+AGG + chr5_2:7265373-7265392 Msa0753630:CDS 40.0%
GAGGTTGAAATTCGTCCAAA+CGG - chr5_2:7265401-7265420 None:intergenic 40.0%
CTGGAACACACAAGAAAACA+TGG + chr5_2:7265452-7265471 Msa0753630:CDS 40.0%
ACACACAAGAAAACATGGAG+TGG + chr5_2:7265457-7265476 Msa0753630:CDS 40.0%
AGCAATTCCAAGCTGCATTT+CGG + chr5_2:7265525-7265544 Msa0753630:CDS 40.0%
ATAGATGCAACAGTTGCATG+TGG - chr5_2:7265610-7265629 None:intergenic 40.0%
ACATGCAACTGTTGCATCTA+TGG + chr5_2:7265609-7265628 Msa0753630:CDS 40.0%
CATGCAACTGTTGCATCTAT+GGG + chr5_2:7265610-7265629 Msa0753630:CDS 40.0%
!!! GCTGCAAGTTTTGCTTTTTG+TGG - chr5_2:7265733-7265752 None:intergenic 40.0%
GCAAAACTTGCAGCAATAGT+TGG + chr5_2:7265739-7265758 Msa0753630:CDS 40.0%
TGTCCACAAACAACTGTTTG+TGG + chr5_2:7265913-7265932 Msa0753630:CDS 40.0%
ACACCACAAACAGTTGTTTG+TGG - chr5_2:7265919-7265938 None:intergenic 40.0%
! CAACTGTTTGTGGTGTTTTG+AGG + chr5_2:7265923-7265942 Msa0753630:CDS 40.0%
!! ACTGTTTGTGGTGTTTTGAG+GGG + chr5_2:7265925-7265944 Msa0753630:CDS 40.0%
AAACTCAACCAAACTGCAAC+AGG - chr5_2:7266012-7266031 None:intergenic 40.0%
GTTTGGTTGAGTTTCTTTGC+TGG + chr5_2:7266018-7266037 Msa0753630:CDS 40.0%
!! AGGTTTGTGGTTTGGTCTTA+TGG + chr5_2:7266053-7266072 Msa0753630:CDS 40.0%
AAATCAAGCAGAGAGAGCTA+AGG + chr5_2:7266134-7266153 Msa0753630:CDS 40.0%
!!! CTGTGTTTTGATTGTGGTTG+TGG - chr5_2:7264726-7264745 None:intergenic 40.0%
! ATCAACGGTGTTAACATGTC+AGG - chr5_2:7264761-7264780 None:intergenic 40.0%
CATTGAGGGCAAGAGAAAAA+TGG - chr5_2:7264820-7264839 None:intergenic 40.0%
ACAAATAGGTTCCATTCCCA+TGG - chr5_2:7265020-7265039 None:intergenic 40.0%
ATGGGAATGGAACCTATTTG+TGG + chr5_2:7265019-7265038 Msa0753630:CDS 40.0%
CCAAAAGCTTGACCACAAAT+AGG - chr5_2:7265034-7265053 None:intergenic 40.0%
! CCTATTTGTGGTCAAGCTTT+TGG + chr5_2:7265031-7265050 Msa0753630:CDS 40.0%
GGAATAAGAGGAATCGCTTT+AGG + chr5_2:7265373-7265392 Msa0753630:CDS 40.0%
GAGGTTGAAATTCGTCCAAA+CGG - chr5_2:7265401-7265420 None:intergenic 40.0%
CTGGAACACACAAGAAAACA+TGG + chr5_2:7265452-7265471 Msa0753630:CDS 40.0%
ACACACAAGAAAACATGGAG+TGG + chr5_2:7265457-7265476 Msa0753630:CDS 40.0%
AGCAATTCCAAGCTGCATTT+CGG + chr5_2:7265525-7265544 Msa0753630:CDS 40.0%
ATAGATGCAACAGTTGCATG+TGG - chr5_2:7265610-7265629 None:intergenic 40.0%
ACATGCAACTGTTGCATCTA+TGG + chr5_2:7265609-7265628 Msa0753630:CDS 40.0%
CATGCAACTGTTGCATCTAT+GGG + chr5_2:7265610-7265629 Msa0753630:CDS 40.0%
!!! GCTGCAAGTTTTGCTTTTTG+TGG - chr5_2:7265733-7265752 None:intergenic 40.0%
GCAAAACTTGCAGCAATAGT+TGG + chr5_2:7265739-7265758 Msa0753630:CDS 40.0%
TGTCCACAAACAACTGTTTG+TGG + chr5_2:7265913-7265932 Msa0753630:CDS 40.0%
ACACCACAAACAGTTGTTTG+TGG - chr5_2:7265919-7265938 None:intergenic 40.0%
! CAACTGTTTGTGGTGTTTTG+AGG + chr5_2:7265923-7265942 Msa0753630:CDS 40.0%
!! ACTGTTTGTGGTGTTTTGAG+GGG + chr5_2:7265925-7265944 Msa0753630:CDS 40.0%
AAACTCAACCAAACTGCAAC+AGG - chr5_2:7266012-7266031 None:intergenic 40.0%
GTTTGGTTGAGTTTCTTTGC+TGG + chr5_2:7266018-7266037 Msa0753630:CDS 40.0%
!! AGGTTTGTGGTTTGGTCTTA+TGG + chr5_2:7266053-7266072 Msa0753630:CDS 40.0%
AAATCAAGCAGAGAGAGCTA+AGG + chr5_2:7266134-7266153 Msa0753630:CDS 40.0%
GTTGGGGATTTAGGGATCAA+CGG - chr5_2:7264776-7264795 None:intergenic 45.0%
ATGTTGTTCCTTGGTCGTGT+TGG + chr5_2:7264917-7264936 Msa0753630:CDS 45.0%
ACAGGTTACTCCATTCTCTC+TGG + chr5_2:7264989-7265008 Msa0753630:CDS 45.0%
!! ATTCTCTCTGGTCTTGCCAT+GGG + chr5_2:7265001-7265020 Msa0753630:CDS 45.0%
! GAATCGCTTTAGGTTCCGTT+TGG + chr5_2:7265383-7265402 Msa0753630:CDS 45.0%
!! CCATCCTTTAAAACAAGCGG+AGG - chr5_2:7265488-7265507 None:intergenic 45.0%
!!! CCTCCGCTTGTTTTAAAGGA+TGG + chr5_2:7265485-7265504 Msa0753630:CDS 45.0%
AGACAAACCGAAATGCAGCT+TGG - chr5_2:7265535-7265554 None:intergenic 45.0%
! GCATTTCGGTTTGTCTCGAA+TGG + chr5_2:7265539-7265558 Msa0753630:CDS 45.0%
! TTTCGGTTTGTCTCGAATGG+TGG + chr5_2:7265542-7265561 Msa0753630:CDS 45.0%
!! TTTGGTCTTATGGCTGCTCA+AGG + chr5_2:7266063-7266082 Msa0753630:CDS 45.0%
GTTGGGGATTTAGGGATCAA+CGG - chr5_2:7264776-7264795 None:intergenic 45.0%
ATGTTGTTCCTTGGTCGTGT+TGG + chr5_2:7264917-7264936 Msa0753630:CDS 45.0%
ACAGGTTACTCCATTCTCTC+TGG + chr5_2:7264989-7265008 Msa0753630:CDS 45.0%
!! ATTCTCTCTGGTCTTGCCAT+GGG + chr5_2:7265001-7265020 Msa0753630:CDS 45.0%
! GAATCGCTTTAGGTTCCGTT+TGG + chr5_2:7265383-7265402 Msa0753630:CDS 45.0%
!! CCATCCTTTAAAACAAGCGG+AGG - chr5_2:7265488-7265507 None:intergenic 45.0%
!!! CCTCCGCTTGTTTTAAAGGA+TGG + chr5_2:7265485-7265504 Msa0753630:CDS 45.0%
AGACAAACCGAAATGCAGCT+TGG - chr5_2:7265535-7265554 None:intergenic 45.0%
! GCATTTCGGTTTGTCTCGAA+TGG + chr5_2:7265539-7265558 Msa0753630:CDS 45.0%
! TTTCGGTTTGTCTCGAATGG+TGG + chr5_2:7265542-7265561 Msa0753630:CDS 45.0%
!! TTTGGTCTTATGGCTGCTCA+AGG + chr5_2:7266063-7266082 Msa0753630:CDS 45.0%
! GTTGGTGAGCTTGCTTTAGC+AGG + chr5_2:7264935-7264954 Msa0753630:CDS 50.0%
! GTGAGCTTGCTTTAGCAGGT+GGG + chr5_2:7264939-7264958 Msa0753630:CDS 50.0%
CATGGCAAGACCAGAGAGAA+TGG - chr5_2:7265002-7265021 None:intergenic 50.0%
!! CATTCTCTCTGGTCTTGCCA+TGG + chr5_2:7265000-7265019 Msa0753630:CDS 50.0%
TGGGAATGCCTGTTGCAGTT+TGG + chr5_2:7266001-7266020 Msa0753630:CDS 50.0%
GGCTGCTCAAGGTTCATGTA+TGG + chr5_2:7266074-7266093 Msa0753630:CDS 50.0%
! GTTGGTGAGCTTGCTTTAGC+AGG + chr5_2:7264935-7264954 Msa0753630:CDS 50.0%
! GTGAGCTTGCTTTAGCAGGT+GGG + chr5_2:7264939-7264958 Msa0753630:CDS 50.0%
CATGGCAAGACCAGAGAGAA+TGG - chr5_2:7265002-7265021 None:intergenic 50.0%
!! CATTCTCTCTGGTCTTGCCA+TGG + chr5_2:7265000-7265019 Msa0753630:CDS 50.0%
TGGGAATGCCTGTTGCAGTT+TGG + chr5_2:7266001-7266020 Msa0753630:CDS 50.0%
GGCTGCTCAAGGTTCATGTA+TGG + chr5_2:7266074-7266093 Msa0753630:CDS 50.0%
CAAGCTCACCAACACGACCA+AGG - chr5_2:7264928-7264947 None:intergenic 55.0%
! GGTGAGCTTGCTTTAGCAGG+TGG + chr5_2:7264938-7264957 Msa0753630:CDS 55.0%
!! CTCTGGTCTTGCCATGGGAA+TGG + chr5_2:7265006-7265025 Msa0753630:CDS 55.0%
CGGTTTGTCTCGAATGGTGG+TGG + chr5_2:7265545-7265564 Msa0753630:CDS 55.0%
!!! GTGTTTTGAGGGGAACAGCG+AGG + chr5_2:7265935-7265954 Msa0753630:CDS 55.0%
GGAACAGCGAGGCCGAAATT+AGG + chr5_2:7265946-7265965 Msa0753630:CDS 55.0%
CAAGCTCACCAACACGACCA+AGG - chr5_2:7264928-7264947 None:intergenic 55.0%
! GGTGAGCTTGCTTTAGCAGG+TGG + chr5_2:7264938-7264957 Msa0753630:CDS 55.0%
!! CTCTGGTCTTGCCATGGGAA+TGG + chr5_2:7265006-7265025 Msa0753630:CDS 55.0%
CGGTTTGTCTCGAATGGTGG+TGG + chr5_2:7265545-7265564 Msa0753630:CDS 55.0%
!!! GTGTTTTGAGGGGAACAGCG+AGG + chr5_2:7265935-7265954 Msa0753630:CDS 55.0%
GGAACAGCGAGGCCGAAATT+AGG + chr5_2:7265946-7265965 Msa0753630:CDS 55.0%
GCAGGTGGGTCACTTGCCAT+TGG + chr5_2:7264953-7264972 Msa0753630:CDS 60.0%
GCAGGTGGGTCACTTGCCAT+TGG + chr5_2:7264953-7264972 Msa0753630:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 7264647 7266260 7264647 ID=Msa0753630;Name=Msa0753630
chr5_2 mRNA 7264647 7266260 7264647 ID=Msa0753630-mRNA-1;Parent=Msa0753630;Name=Msa0753630-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|537
chr5_2 exon 7264647 7266260 7264647 ID=Msa0753630-mRNA-1:exon:3209;Parent=Msa0753630-mRNA-1
chr5_2 CDS 7264647 7266260 7264647 ID=Msa0753630-mRNA-1:cds;Parent=Msa0753630-mRNA-1
Gene Sequence

>Msa0753630

ATGTGCAAGTTATCATCATCATCAACCTCTGTCTCTACTTTGTATGAAAGCAATAACAACCAAACAAATAATATATCCACAACCACAATCAAAACACAGAATAATATCAAACCTGACATGTTAACACCGTTGATCCCTAAATCCCCAACATTCAAACAACAAAAGAAAACCCATTTTTCTCTTGCCCTCAATGAAGCCAAACATATTTCAAACATAGCATTACCTATGGTTTTAACAGGTTTATTACTTTATTCTCGTTCCATCATTTCAATGTTGTTCCTTGGTCGTGTTGGTGAGCTTGCTTTAGCAGGTGGGTCACTTGCCATTGGATTTGCAAACATAACAGGTTACTCCATTCTCTCTGGTCTTGCCATGGGAATGGAACCTATTTGTGGTCAAGCTTTTGGTGCTAAAAGATTCAAACTCCTTGGTTTAACAATGCAAAGAACAGTGATTCTTCTTCTTGTAACTTCAATTTTCATTTCATTCTTATGGCTTAACATGAAGAGATTATTGCTTTTATGTGGCCAACAAGAAGATATAGCAAACGTTGCACAATCTTACATTCTTTATTCTCTTCCTGATCTTGTAGCACAATCATTGCTACACCCTTTGAGAATCTATCTTCGAAGCCAATCCATAACACTTCCTTTAACATACAGTGCTACTTTGTCTATTCTTCTTCACATTCCTATAAACTATTTTCTTGTCAATGTTCTTCAATTGGGAATAAGAGGAATCGCTTTAGGTTCCGTTTGGACGAATTTCAACCTCGTTGTTTCGCTGATTATTTACATTTGGGTTTCTGGAACACACAAGAAAACATGGAGTGGAATTTCCTCCGCTTGTTTTAAAGGATGGAAATCGCTTTTGAATTTAGCAATTCCAAGCTGCATTTCGGTTTGTCTCGAATGGTGGTGGTACGAAATCATGATTCTGCTTTGTGGATTATTGCTTAATCCACATGCAACTGTTGCATCTATGGGTGTGTTGATTCAAACCACTGCATTGATATACATTTTTCCTTCTTCTTTGAGTTTTGGTGTTTCAACAAGAGTTGGAAATGAACTTGGTGCTGAAAACCCACAAAAAGCAAAACTTGCAGCAATAGTTGGACTCTGTTTCAGTTTTGTTTTGGGTTTCTCCGCTTTGTTTTTCGCCTTTTCTGTTAGAAACATTTGGGCTACTATGTTCACAAGTGATCCACAAATAATTGCTTTAACATCAATGGTGTTACCGATTATAGGACTATGTGAGCTTGGAAATTGTCCACAAACAACTGTTTGTGGTGTTTTGAGGGGAACAGCGAGGCCGAAATTAGGCGCAAATATAAATTTAGGTTGTTTTTATCTTGTGGGAATGCCTGTTGCAGTTTGGTTGAGTTTCTTTGCTGGATTTGATTTCAAAGGTTTGTGGTTTGGTCTTATGGCTGCTCAAGGTTCATGTATGGTTACAATGTTGTTTGTTTTGGTTCGTACAAATTGGGAAAATCAAGCAGAGAGAGCTAAGGAGTTAACATCATCAGATTCAAGTGAAGAAGAACAAGAGGAAGAGAAAGTGATTATCAATTCAAGTTCATGTGGCACAAAAGAGTGCTCTGATTCATTAGTTTGA
Protein sequence

>Msa0753630

MCKLSSSSTSVSTLYESNNNQTNNISTTTIKTQNNIKPDMLTPLIPKSPTFKQQKKTHFSLALNEAKHISNIALPMVLTGLLLYSRSIISMLFLGRVGELALAGGSLAIGFANITGYSILSGLAMGMEPICGQAFGAKRFKLLGLTMQRTVILLLVTSIFISFLWLNMKRLLLLCGQQEDIANVAQSYILYSLPDLVAQSLLHPLRIYLRSQSITLPLTYSATLSILLHIPINYFLVNVLQLGIRGIALGSVWTNFNLVVSLIIYIWVSGTHKKTWSGISSACFKGWKSLLNLAIPSCISVCLEWWWYEIMILLCGLLLNPHATVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAENPQKAKLAAIVGLCFSFVLGFSALFFAFSVRNIWATMFTSDPQIIALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLSFFAGFDFKGLWFGLMAAQGSCMVTMLFVLVRTNWENQAERAKELTSSDSSEEEQEEEKVIINSSSCGTKECSDSLV*