Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795200 | XP_003611148.1 | 99.072 | 539 | 3 | 2 | 1 | 537 | 1 | 539 | 0.0 | 1073 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795200 | sp|O82752|DTX49_ARATH | 69.008 | 484 | 143 | 3 | 40 | 516 | 1 | 484 | 0.0 | 615 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795200 | G7KDH1 | 99.072 | 539 | 3 | 2 | 1 | 537 | 1 | 539 | 0.0 | 1073 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0753630 | Msa0795200 | 0.806452 | 8.171667e-50 | -8.615850e-47 |
Msa0795200 | Msa0832770 | 0.829822 | 4.151387e-55 | -8.615850e-47 |
Msa0795200 | Msa1441320 | 0.869429 | 3.117255e-66 | -8.615850e-47 |
Msa0484390 | Msa0795200 | 0.863948 | 1.728638e-64 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795200 | MtrunA17_Chr5g0397991 | 99.072 | 539 | 3 | 2 | 1 | 537 | 1 | 539 | 0.0 | 1073 |
Msa0795200 | MtrunA17_Chr1g0203791 | 67.351 | 536 | 155 | 5 | 1 | 521 | 1 | 531 | 0.0 | 703 |
Msa0795200 | MtrunA17_Chr6g0473701 | 65.769 | 520 | 157 | 4 | 12 | 526 | 89 | 592 | 0.0 | 673 |
Msa0795200 | MtrunA17_Chr5g0428251 | 57.529 | 518 | 211 | 2 | 1 | 518 | 1 | 509 | 0.0 | 610 |
Msa0795200 | MtrunA17_Chr3g0140931 | 55.827 | 532 | 208 | 5 | 32 | 536 | 13 | 544 | 0.0 | 588 |
Msa0795200 | MtrunA17_Chr8g0389801 | 54.167 | 456 | 207 | 1 | 51 | 506 | 10 | 463 | 0.0 | 520 |
Msa0795200 | MtrunA17_Chr4g0013031 | 52.371 | 464 | 218 | 2 | 64 | 524 | 66 | 529 | 1.58e-168 | 488 |
Msa0795200 | MtrunA17_Chr6g0467321 | 46.318 | 516 | 251 | 7 | 18 | 518 | 4 | 508 | 1.05e-160 | 468 |
Msa0795200 | MtrunA17_Chr2g0295631 | 43.187 | 477 | 253 | 3 | 63 | 521 | 19 | 495 | 1.24e-131 | 392 |
Msa0795200 | MtrunA17_Chr6g0487091 | 53.049 | 328 | 145 | 2 | 192 | 519 | 87 | 405 | 1.77e-119 | 358 |
Msa0795200 | MtrunA17_Chr6g0487091 | 48.101 | 79 | 41 | 0 | 47 | 125 | 10 | 88 | 9.43e-17 | 82.4 |
Msa0795200 | MtrunA17_Chr6g0483381 | 35.430 | 477 | 300 | 3 | 42 | 513 | 5 | 478 | 1.87e-98 | 306 |
Msa0795200 | MtrunA17_Chr8g0392601 | 36.283 | 452 | 272 | 7 | 61 | 504 | 9 | 452 | 2.10e-87 | 278 |
Msa0795200 | MtrunA17_Chr6g0477961 | 33.753 | 477 | 308 | 3 | 42 | 513 | 5 | 478 | 1.17e-86 | 276 |
Msa0795200 | MtrunA17_Chr6g0483361 | 33.407 | 455 | 301 | 1 | 52 | 504 | 13 | 467 | 1.85e-86 | 275 |
Msa0795200 | MtrunA17_Chr6g0483341 | 33.626 | 455 | 293 | 3 | 64 | 513 | 41 | 491 | 6.60e-86 | 274 |
Msa0795200 | MtrunA17_Chr1g0208791 | 32.917 | 480 | 307 | 6 | 47 | 519 | 27 | 498 | 8.39e-84 | 269 |
Msa0795200 | MtrunA17_Chr1g0208821 | 32.895 | 456 | 300 | 2 | 52 | 504 | 29 | 481 | 1.48e-83 | 268 |
Msa0795200 | MtrunA17_Chr6g0449061 | 32.359 | 479 | 303 | 8 | 34 | 504 | 6 | 471 | 2.05e-77 | 252 |
Msa0795200 | MtrunA17_Chr2g0317131 | 32.657 | 493 | 308 | 5 | 25 | 514 | 16 | 487 | 4.12e-76 | 248 |
Msa0795200 | MtrunA17_Chr6g0483331 | 31.674 | 442 | 301 | 1 | 64 | 504 | 12 | 453 | 1.23e-75 | 246 |
Msa0795200 | MtrunA17_Chr7g0251331 | 31.568 | 472 | 308 | 6 | 53 | 515 | 16 | 481 | 2.72e-74 | 243 |
Msa0795200 | MtrunA17_Chr6g0483351 | 33.947 | 380 | 249 | 1 | 123 | 500 | 1 | 380 | 1.59e-71 | 234 |
Msa0795200 | MtrunA17_Chr2g0317161 | 32.484 | 471 | 300 | 5 | 61 | 527 | 28 | 484 | 1.72e-71 | 236 |
Msa0795200 | MtrunA17_Chr2g0322671 | 29.730 | 444 | 311 | 1 | 72 | 514 | 60 | 503 | 8.30e-71 | 235 |
Msa0795200 | MtrunA17_Chr1g0208891 | 33.406 | 458 | 295 | 4 | 63 | 515 | 23 | 475 | 4.67e-70 | 232 |
Msa0795200 | MtrunA17_Chr2g0317151 | 34.086 | 443 | 269 | 5 | 61 | 492 | 30 | 460 | 1.23e-67 | 226 |
Msa0795200 | MtrunA17_Chr4g0024501 | 28.222 | 450 | 322 | 1 | 65 | 513 | 65 | 514 | 5.81e-67 | 225 |
Msa0795200 | MtrunA17_Chr8g0368001 | 28.738 | 515 | 332 | 10 | 18 | 516 | 16 | 511 | 1.66e-66 | 224 |
Msa0795200 | MtrunA17_Chr2g0317171 | 31.780 | 472 | 302 | 7 | 61 | 527 | 34 | 490 | 2.79e-66 | 223 |
Msa0795200 | MtrunA17_Chr1g0208881 | 31.158 | 475 | 319 | 4 | 40 | 510 | 1 | 471 | 3.20e-66 | 222 |
Msa0795200 | MtrunA17_Chr6g0483161 | 33.596 | 381 | 234 | 2 | 122 | 502 | 2 | 363 | 6.40e-66 | 218 |
Msa0795200 | MtrunA17_Chr2g0317221 | 32.439 | 410 | 259 | 5 | 122 | 527 | 9 | 404 | 1.14e-57 | 197 |
Msa0795200 | MtrunA17_Chr5g0412541 | 29.075 | 454 | 318 | 3 | 65 | 516 | 37 | 488 | 3.43e-57 | 198 |
Msa0795200 | MtrunA17_Chr6g0468521 | 27.984 | 486 | 337 | 4 | 40 | 517 | 1 | 481 | 4.41e-57 | 198 |
Msa0795200 | MtrunA17_Chr2g0288281 | 29.551 | 379 | 267 | 0 | 126 | 504 | 4 | 382 | 2.38e-56 | 193 |
Msa0795200 | MtrunA17_Chr1g0202761 | 28.958 | 480 | 321 | 7 | 51 | 526 | 34 | 497 | 8.55e-55 | 192 |
Msa0795200 | MtrunA17_Chr7g0254521 | 27.887 | 459 | 322 | 3 | 64 | 518 | 31 | 484 | 2.68e-54 | 191 |
Msa0795200 | MtrunA17_Chr5g0412771 | 26.719 | 509 | 347 | 7 | 18 | 519 | 21 | 510 | 7.92e-54 | 190 |
Msa0795200 | MtrunA17_Chr5g0442331 | 31.222 | 442 | 292 | 5 | 87 | 523 | 69 | 503 | 9.65e-53 | 187 |
Msa0795200 | MtrunA17_Chr6g0468531 | 29.158 | 487 | 331 | 5 | 40 | 517 | 1 | 482 | 1.07e-52 | 186 |
Msa0795200 | MtrunA17_Chr7g0251321 | 30.750 | 400 | 244 | 7 | 123 | 515 | 1 | 374 | 3.16e-52 | 182 |
Msa0795200 | MtrunA17_Chr6g0468511 | 28.298 | 470 | 324 | 4 | 40 | 501 | 1 | 465 | 6.78e-52 | 184 |
Msa0795200 | MtrunA17_Chr1g0154441 | 28.947 | 380 | 265 | 3 | 127 | 504 | 5 | 381 | 7.74e-52 | 181 |
Msa0795200 | MtrunA17_Chr7g0254511 | 26.696 | 457 | 325 | 4 | 64 | 516 | 30 | 480 | 4.10e-51 | 182 |
Msa0795200 | MtrunA17_Chr3g0132531 | 25.646 | 503 | 355 | 7 | 31 | 520 | 6 | 502 | 6.18e-49 | 176 |
Msa0795200 | MtrunA17_Chr5g0412571 | 30.075 | 399 | 272 | 6 | 122 | 516 | 39 | 434 | 1.85e-46 | 168 |
Msa0795200 | MtrunA17_Chr7g0248051 | 26.419 | 458 | 313 | 2 | 65 | 511 | 71 | 515 | 7.01e-45 | 166 |
Msa0795200 | MtrunA17_Chr7g0254531 | 27.089 | 395 | 287 | 1 | 123 | 517 | 1 | 394 | 1.72e-42 | 156 |
Msa0795200 | MtrunA17_Chr6g0460541 | 25.553 | 407 | 283 | 2 | 122 | 519 | 4 | 399 | 6.68e-41 | 152 |
Msa0795200 | MtrunA17_Chr5g0398571 | 31.879 | 298 | 196 | 4 | 220 | 513 | 2 | 296 | 1.27e-40 | 149 |
Msa0795200 | MtrunA17_Chr3g0132541 | 22.131 | 488 | 317 | 6 | 34 | 514 | 4 | 435 | 2.00e-33 | 132 |
Msa0795200 | MtrunA17_Chr6g0483264 | 36.139 | 202 | 125 | 2 | 303 | 502 | 1 | 200 | 1.02e-31 | 122 |
Msa0795200 | MtrunA17_Chr8g0364761 | 33.468 | 248 | 158 | 5 | 87 | 330 | 76 | 320 | 1.29e-30 | 122 |
Msa0795200 | MtrunA17_Chr7g0254501 | 24.281 | 313 | 235 | 2 | 207 | 519 | 1 | 311 | 8.92e-30 | 119 |
Msa0795200 | MtrunA17_Chr6g0483241 | 32.778 | 180 | 121 | 0 | 122 | 301 | 2 | 181 | 6.51e-25 | 101 |
Msa0795200 | MtrunA17_Chr5g0440661 | 27.324 | 355 | 193 | 8 | 123 | 476 | 1 | 291 | 3.71e-24 | 103 |
Msa0795200 | MtrunA17_Chr6g0483261 | 37.419 | 155 | 93 | 2 | 350 | 502 | 6 | 158 | 1.15e-22 | 95.5 |
Msa0795200 | MtrunA17_Chr6g0483221 | 36.913 | 149 | 94 | 0 | 350 | 498 | 6 | 154 | 2.58e-22 | 94.4 |
Msa0795200 | MtrunA17_Chr6g0460531 | 30.085 | 236 | 158 | 4 | 53 | 285 | 13 | 244 | 7.05e-21 | 92.4 |
Msa0795200 | MtrunA17_Chr8g0364751 | 31.138 | 167 | 111 | 2 | 350 | 514 | 19 | 183 | 1.61e-20 | 89.4 |
Msa0795200 | MtrunA17_Chr5g0398551 | 52.381 | 84 | 40 | 0 | 60 | 143 | 39 | 122 | 2.35e-20 | 87.4 |
Msa0795200 | MtrunA17_Chr5g0442311 | 31.395 | 172 | 118 | 0 | 126 | 297 | 4 | 175 | 2.09e-15 | 74.7 |
Msa0795200 | MtrunA17_Chr6g0460521 | 24.537 | 216 | 163 | 0 | 303 | 518 | 4 | 219 | 3.87e-14 | 72.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795200 | AT4G23030.1 | 69.008 | 484 | 143 | 3 | 40 | 516 | 1 | 484 | 0.0 | 615 |
Msa0795200 | AT1G58340.1 | 62.335 | 454 | 171 | 0 | 54 | 507 | 47 | 500 | 0.0 | 558 |
Msa0795200 | AT4G29140.1 | 56.118 | 474 | 204 | 2 | 62 | 535 | 53 | 522 | 0.0 | 551 |
Msa0795200 | AT5G52050.1 | 55.556 | 495 | 208 | 4 | 34 | 518 | 5 | 497 | 0.0 | 545 |
Msa0795200 | AT5G19700.1 | 53.469 | 490 | 217 | 1 | 23 | 512 | 5 | 483 | 0.0 | 541 |
Msa0795200 | AT2G38510.1 | 50.218 | 458 | 227 | 1 | 64 | 520 | 5 | 462 | 1.23e-168 | 486 |
Msa0795200 | AT1G71870.1 | 46.531 | 490 | 244 | 3 | 47 | 518 | 6 | 495 | 1.02e-155 | 454 |
Msa0795200 | AT5G49130.1 | 45.987 | 461 | 235 | 2 | 63 | 509 | 24 | 484 | 2.29e-134 | 400 |
Msa0795200 | AT4G22790.1 | 40.592 | 473 | 261 | 10 | 56 | 518 | 21 | 483 | 2.61e-92 | 291 |
Msa0795200 | AT1G71140.1 | 33.839 | 461 | 292 | 6 | 54 | 509 | 18 | 470 | 4.08e-82 | 264 |
Msa0795200 | AT5G52450.1 | 33.874 | 493 | 299 | 7 | 39 | 522 | 11 | 485 | 2.39e-81 | 262 |
Msa0795200 | AT2G04070.1 | 34.316 | 475 | 306 | 4 | 40 | 510 | 1 | 473 | 5.94e-81 | 261 |
Msa0795200 | AT2G34360.1 | 34.016 | 488 | 290 | 10 | 37 | 514 | 5 | 470 | 1.68e-80 | 260 |
Msa0795200 | AT1G73700.1 | 34.232 | 482 | 305 | 4 | 39 | 516 | 3 | 476 | 1.99e-80 | 259 |
Msa0795200 | AT2G04080.1 | 33.262 | 469 | 306 | 3 | 40 | 504 | 1 | 466 | 7.76e-80 | 258 |
Msa0795200 | AT2G04050.1 | 34.395 | 471 | 296 | 4 | 44 | 510 | 12 | 473 | 3.28e-78 | 254 |
Msa0795200 | AT2G04080.2 | 32.903 | 465 | 305 | 3 | 40 | 500 | 1 | 462 | 2.19e-76 | 249 |
Msa0795200 | AT1G15150.1 | 31.360 | 456 | 309 | 2 | 65 | 518 | 31 | 484 | 2.12e-75 | 247 |
Msa0795200 | AT2G04040.1 | 32.506 | 443 | 293 | 2 | 65 | 504 | 27 | 466 | 2.94e-75 | 246 |
Msa0795200 | AT1G15170.1 | 33.933 | 445 | 284 | 4 | 65 | 504 | 34 | 473 | 2.02e-74 | 244 |
Msa0795200 | AT1G15160.1 | 31.590 | 478 | 319 | 3 | 47 | 518 | 9 | 484 | 4.25e-74 | 243 |
Msa0795200 | AT1G66760.2 | 32.495 | 477 | 304 | 7 | 36 | 504 | 1 | 467 | 1.60e-72 | 239 |
Msa0795200 | AT2G04100.1 | 32.506 | 443 | 293 | 2 | 65 | 504 | 30 | 469 | 2.56e-72 | 239 |
Msa0795200 | AT2G04090.1 | 32.506 | 443 | 293 | 2 | 65 | 504 | 30 | 469 | 3.11e-72 | 238 |
Msa0795200 | AT1G64820.1 | 31.590 | 478 | 306 | 6 | 61 | 523 | 25 | 496 | 1.50e-71 | 237 |
Msa0795200 | AT1G61890.1 | 28.827 | 503 | 346 | 6 | 18 | 516 | 2 | 496 | 4.85e-71 | 236 |
Msa0795200 | AT3G23550.1 | 33.260 | 454 | 292 | 3 | 47 | 497 | 18 | 463 | 1.48e-70 | 234 |
Msa0795200 | AT1G66760.1 | 32.272 | 471 | 301 | 7 | 36 | 498 | 1 | 461 | 4.07e-70 | 232 |
Msa0795200 | AT2G04100.2 | 32.494 | 437 | 289 | 2 | 65 | 498 | 30 | 463 | 1.78e-69 | 231 |
Msa0795200 | AT1G66780.1 | 31.878 | 458 | 302 | 4 | 52 | 504 | 22 | 474 | 6.06e-68 | 227 |
Msa0795200 | AT2G34360.2 | 31.134 | 485 | 266 | 8 | 37 | 514 | 5 | 428 | 6.52e-68 | 226 |
Msa0795200 | AT1G15180.1 | 31.799 | 478 | 316 | 4 | 31 | 504 | 3 | 474 | 9.53e-68 | 226 |
Msa0795200 | AT1G11670.1 | 29.213 | 445 | 311 | 2 | 62 | 504 | 47 | 489 | 1.08e-67 | 227 |
Msa0795200 | AT1G61890.2 | 28.660 | 485 | 336 | 5 | 18 | 498 | 2 | 480 | 2.71e-67 | 226 |
Msa0795200 | AT3G23560.1 | 34.845 | 419 | 263 | 5 | 63 | 476 | 37 | 450 | 6.81e-67 | 224 |
Msa0795200 | AT3G21690.1 | 27.079 | 469 | 338 | 1 | 47 | 515 | 38 | 502 | 4.38e-64 | 218 |
Msa0795200 | AT4G21910.3 | 27.701 | 509 | 342 | 5 | 24 | 513 | 2 | 503 | 1.38e-63 | 216 |
Msa0795200 | AT4G21910.1 | 27.701 | 509 | 342 | 5 | 24 | 513 | 2 | 503 | 1.38e-63 | 216 |
Msa0795200 | AT4G21910.2 | 29.111 | 450 | 317 | 2 | 65 | 513 | 57 | 505 | 4.34e-62 | 212 |
Msa0795200 | AT4G21910.4 | 29.111 | 450 | 317 | 2 | 65 | 513 | 57 | 505 | 4.34e-62 | 212 |
Msa0795200 | AT3G59030.1 | 29.630 | 459 | 315 | 2 | 61 | 515 | 47 | 501 | 9.63e-62 | 211 |
Msa0795200 | AT3G26590.1 | 27.766 | 461 | 326 | 4 | 65 | 523 | 45 | 500 | 2.10e-61 | 210 |
Msa0795200 | AT1G61890.3 | 30.402 | 398 | 277 | 0 | 65 | 462 | 47 | 444 | 5.11e-61 | 208 |
Msa0795200 | AT1G15170.2 | 34.097 | 349 | 220 | 4 | 161 | 504 | 11 | 354 | 3.45e-59 | 200 |
Msa0795200 | AT1G23300.1 | 28.039 | 510 | 340 | 9 | 18 | 518 | 5 | 496 | 2.35e-58 | 202 |
Msa0795200 | AT5G38030.1 | 27.765 | 443 | 311 | 5 | 65 | 503 | 45 | 482 | 4.42e-58 | 201 |
Msa0795200 | AT4G00350.1 | 26.233 | 507 | 362 | 4 | 13 | 518 | 44 | 539 | 8.71e-57 | 199 |
Msa0795200 | AT4G21903.1 | 28.205 | 429 | 306 | 2 | 88 | 515 | 76 | 503 | 2.02e-56 | 197 |
Msa0795200 | AT3G23560.2 | 34.682 | 346 | 219 | 3 | 63 | 405 | 37 | 378 | 9.65e-56 | 193 |
Msa0795200 | AT1G12950.1 | 27.354 | 446 | 311 | 5 | 65 | 504 | 67 | 505 | 2.26e-55 | 194 |
Msa0795200 | AT5G10420.1 | 31.140 | 456 | 302 | 5 | 65 | 512 | 38 | 489 | 3.09e-55 | 193 |
Msa0795200 | AT1G15150.2 | 30.833 | 360 | 245 | 2 | 161 | 518 | 11 | 368 | 5.72e-55 | 189 |
Msa0795200 | AT1G47530.1 | 26.316 | 475 | 337 | 6 | 37 | 503 | 3 | 472 | 6.97e-55 | 192 |
Msa0795200 | AT3G26590.2 | 27.342 | 395 | 282 | 3 | 126 | 518 | 4 | 395 | 7.25e-55 | 190 |
Msa0795200 | AT4G21903.3 | 28.571 | 392 | 279 | 1 | 126 | 516 | 4 | 395 | 8.95e-54 | 187 |
Msa0795200 | AT4G21903.2 | 27.703 | 444 | 308 | 4 | 88 | 531 | 76 | 506 | 1.82e-53 | 189 |
Msa0795200 | AT5G44050.1 | 30.512 | 449 | 292 | 8 | 65 | 503 | 40 | 478 | 1.86e-53 | 189 |
Msa0795200 | AT1G66760.4 | 30.923 | 401 | 263 | 5 | 36 | 430 | 1 | 393 | 1.82e-52 | 183 |
Msa0795200 | AT5G65380.1 | 30.258 | 466 | 306 | 9 | 47 | 502 | 18 | 474 | 7.22e-52 | 184 |
Msa0795200 | AT4G25640.1 | 29.011 | 455 | 317 | 2 | 64 | 514 | 33 | 485 | 5.36e-51 | 182 |
Msa0795200 | AT1G33090.1 | 30.193 | 467 | 304 | 8 | 65 | 517 | 36 | 494 | 8.19e-51 | 182 |
Msa0795200 | AT4G25640.2 | 29.011 | 455 | 317 | 2 | 64 | 514 | 33 | 485 | 8.55e-51 | 182 |
Msa0795200 | AT1G33100.1 | 28.726 | 463 | 316 | 6 | 65 | 517 | 33 | 491 | 4.03e-50 | 179 |
Msa0795200 | AT1G33110.1 | 28.205 | 468 | 322 | 8 | 39 | 498 | 7 | 468 | 1.81e-48 | 175 |
Msa0795200 | AT1G33080.1 | 26.767 | 467 | 334 | 4 | 37 | 498 | 5 | 468 | 2.70e-47 | 172 |
Msa0795200 | AT1G33080.2 | 26.767 | 467 | 334 | 4 | 37 | 498 | 5 | 468 | 5.26e-47 | 171 |
Msa0795200 | AT3G59030.2 | 30.749 | 374 | 251 | 2 | 61 | 430 | 47 | 416 | 2.76e-46 | 167 |
Msa0795200 | AT1G47530.2 | 26.440 | 382 | 272 | 5 | 127 | 504 | 5 | 381 | 8.87e-46 | 166 |
Msa0795200 | AT5G17700.2 | 26.105 | 475 | 333 | 9 | 39 | 504 | 7 | 472 | 1.23e-44 | 165 |
Msa0795200 | AT5G17700.1 | 26.105 | 475 | 333 | 9 | 39 | 504 | 7 | 472 | 1.23e-44 | 165 |
Msa0795200 | AT3G03620.2 | 26.383 | 470 | 331 | 7 | 64 | 526 | 36 | 497 | 2.52e-43 | 161 |
Msa0795200 | AT3G03620.1 | 26.383 | 470 | 331 | 7 | 64 | 526 | 36 | 497 | 2.52e-43 | 161 |
Msa0795200 | AT4G25640.3 | 28.784 | 403 | 285 | 1 | 64 | 466 | 33 | 433 | 6.61e-43 | 159 |
Msa0795200 | AT1G66760.3 | 31.563 | 339 | 216 | 6 | 168 | 498 | 3 | 333 | 1.18e-41 | 153 |
Msa0795200 | AT1G33110.2 | 27.569 | 399 | 279 | 6 | 39 | 431 | 7 | 401 | 3.16e-34 | 134 |
Msa0795200 | AT1G15180.2 | 32.308 | 260 | 170 | 2 | 161 | 417 | 11 | 267 | 6.62e-34 | 133 |
Msa0795200 | AT5G17700.3 | 25.978 | 358 | 251 | 7 | 39 | 388 | 7 | 358 | 2.29e-29 | 120 |
Msa0795200 | AT2G04066.1 | 32.258 | 124 | 82 | 1 | 381 | 504 | 40 | 161 | 2.77e-14 | 71.6 |
Find 94 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTATTTACATTTGGGTTTC+TGG | 0.044651 | 5_3:+7134660 | Msa0795200:CDS |
AGGTTTGTGGTTTGGTCTTA+TGG | 0.195458 | 5_3:+7135280 | Msa0795200:CDS |
TTTCCTTCTTCTTTGAGTTT+TGG | 0.208924 | 5_3:+7134894 | Msa0795200:CDS |
TGTTTGAATGTTGGGGATTT+AGG | 0.209468 | 5_3:-7134009 | None:intergenic |
TTAGGCGCAAATATAAATTT+AGG | 0.214567 | 5_3:+7135191 | Msa0795200:CDS |
CCTATTTGTGGTCAAGCTTT+TGG | 0.243633 | 5_3:+7134258 | Msa0795200:CDS |
TTGACAAGAAAATAGTTTAT+AGG | 0.246031 | 5_3:-7134564 | None:intergenic |
CTCGCTGATTATTTACATTT+GGG | 0.264380 | 5_3:+7134653 | Msa0795200:CDS |
TCTCGCTGATTATTTACATT+TGG | 0.270155 | 5_3:+7134652 | Msa0795200:CDS |
GGTTACAATGTTGTTTGTTT+TGG | 0.270469 | 5_3:+7135322 | Msa0795200:CDS |
ACATGCAACTGTTGCATCTA+TGG | 0.280637 | 5_3:+7134836 | Msa0795200:CDS |
TTTATATTTGCGCCTAATTT+CGG | 0.301593 | 5_3:-7135185 | None:intergenic |
GTTTGAATGTTGGGGATTTA+GGG | 0.310488 | 5_3:-7134008 | None:intergenic |
TCTTGTCAATGTTCTTCAAT+TGG | 0.313344 | 5_3:+7134578 | Msa0795200:CDS |
ATTGGATTTGCAAACATAAC+AGG | 0.318839 | 5_3:+7134198 | Msa0795200:CDS |
GGAATAAGAGGAATCGCTTT+AGG | 0.319468 | 5_3:+7134600 | Msa0795200:CDS |
AAAGTAGCACTGTATGTTAA+AGG | 0.335720 | 5_3:-7134522 | None:intergenic |
CTTGTCAATGTTCTTCAATT+GGG | 0.346715 | 5_3:+7134579 | Msa0795200:CDS |
GTTTGGTTGAGTTTCTTTGC+TGG | 0.349890 | 5_3:+7135245 | Msa0795200:CDS |
GATTTCAAAGGTTTGTGGTT+TGG | 0.352902 | 5_3:+7135272 | Msa0795200:CDS |
TCAATGGTGTTACCGATTAT+AGG | 0.360217 | 5_3:+7135098 | Msa0795200:CDS |
GTTCTTCAATTGGGAATAAG+AGG | 0.367653 | 5_3:+7134588 | Msa0795200:CDS |
CCAAAAGCTTGACCACAAAT+AGG | 0.369074 | 5_3:-7134258 | None:intergenic |
CGTTTGCTATATCTTCTTGT+TGG | 0.374870 | 5_3:-7134401 | None:intergenic |
TGCTATGTTTGAAATATGTT+TGG | 0.394695 | 5_3:-7134070 | None:intergenic |
ATCATTTCAATGTTGTTCCT+TGG | 0.403969 | 5_3:+7134135 | Msa0795200:CDS |
CCTCTGCTTGTTTCAAAGGA+TGG | 0.406928 | 5_3:+7134712 | Msa0795200:CDS |
AATGATTGTGCTACAAGATC+AGG | 0.410062 | 5_3:-7134453 | None:intergenic |
TTGTGGATATATTATTTGTT+TGG | 0.410448 | 5_3:-7133933 | None:intergenic |
AGCAATTCCAAGCTGCATTT+CGG | 0.410449 | 5_3:+7134752 | Msa0795200:CDS |
CTCTGGTCTTGCCATGGGAA+TGG | 0.412093 | 5_3:+7134233 | Msa0795200:CDS |
AATAATTGCTTTAACATCAA+TGG | 0.417803 | 5_3:+7135082 | Msa0795200:CDS |
ATTTCCTCTGCTTGTTTCAA+AGG | 0.418055 | 5_3:+7134708 | Msa0795200:CDS |
GAATCGCTTTAGGTTCCGTT+TGG | 0.418185 | 5_3:+7134610 | Msa0795200:CDS |
GCTAAAAGATTCAAACTCCT+TGG | 0.419870 | 5_3:+7134282 | Msa0795200:CDS |
GGAACGGCGAGGCCGAAATT+AGG | 0.422373 | 5_3:+7135173 | Msa0795200:CDS |
AAACTCAACCAAACTGCAAC+AGG | 0.430260 | 5_3:-7135236 | None:intergenic |
AGCTCACATAGTCCTATAAT+CGG | 0.440906 | 5_3:-7135110 | None:intergenic |
GTATGTTAAAGGAAGTGTTA+TGG | 0.441085 | 5_3:-7134511 | None:intergenic |
GCAGGTGGGTCACTTGCCAT+TGG | 0.441197 | 5_3:+7134180 | Msa0795200:CDS |
CATTCTCTCTGGTCTTGCCA+TGG | 0.443498 | 5_3:+7134227 | Msa0795200:CDS |
GCAAAACTTGCAGCAATAGT+TGG | 0.450295 | 5_3:+7134966 | Msa0795200:CDS |
TTTGGTGTTTCAACAAGAGT+TGG | 0.450548 | 5_3:+7134912 | Msa0795200:CDS |
GATGTTAAAGCAATTATTTG+TGG | 0.453850 | 5_3:-7135077 | None:intergenic |
TGGGAATGCCTGTTGCAGTT+TGG | 0.457141 | 5_3:+7135228 | Msa0795200:CDS |
GTTGGTGAGCTTGCTTTAGC+AGG | 0.461842 | 5_3:+7134162 | Msa0795200:CDS |
ATCAACGGTGTTAACATGTC+AGG | 0.462592 | 5_3:-7133985 | None:intergenic |
AAGGAACAACATTGAAATGA+TGG | 0.463159 | 5_3:-7134133 | None:intergenic |
TTTGCTGGATTTGATTTCAA+AGG | 0.464102 | 5_3:+7135260 | Msa0795200:CDS |
GATTTGATTTCAAAGGTTTG+TGG | 0.465351 | 5_3:+7135267 | Msa0795200:CDS |
ATTCTCTCTGGTCTTGCCAT+GGG | 0.465845 | 5_3:+7134228 | Msa0795200:CDS |
GGCTGCTCAAGGTTCATGTA+TGG | 0.465974 | 5_3:+7135301 | Msa0795200:CDS |
TTAAAGGAAGTGTTATGGAT+TGG | 0.467103 | 5_3:-7134506 | None:intergenic |
CGGTTTGTCTCGAATGGTGG+TGG | 0.469476 | 5_3:+7134772 | Msa0795200:CDS |
CATGGCAAGACCAGAGAGAA+TGG | 0.471209 | 5_3:-7134226 | None:intergenic |
GCATTTCGGTTTGTCTCGAA+TGG | 0.473600 | 5_3:+7134766 | Msa0795200:CDS |
CCAAATGTTTCTAACAGAAA+AGG | 0.479393 | 5_3:-7135033 | None:intergenic |
TTCAAACATAGCATTACCTA+TGG | 0.482369 | 5_3:+7134080 | Msa0795200:CDS |
AATATGTTTGGCTTCATTGA+GGG | 0.485509 | 5_3:-7134058 | None:intergenic |
TTCAAGTGAAGAAGAACAAG+AGG | 0.495983 | 5_3:+7135400 | Msa0795200:CDS |
ACAGGTTACTCCATTCTCTC+TGG | 0.501242 | 5_3:+7134216 | Msa0795200:CDS |
TTTGGTCTTATGGCTGCTCA+AGG | 0.501334 | 5_3:+7135290 | Msa0795200:CDS |
ACACCACAAACAGTTGTTTG+TGG | 0.502053 | 5_3:-7135143 | None:intergenic |
GTGAGCTTGCTTTAGCAGGT+GGG | 0.506427 | 5_3:+7134166 | Msa0795200:CDS |
ACAAGAGTTGGAAATGAACT+TGG | 0.513291 | 5_3:+7134924 | Msa0795200:CDS |
AAATATGTTTGGCTTCATTG+AGG | 0.525906 | 5_3:-7134059 | None:intergenic |
ATTATAGGACTATGTGAGCT+TGG | 0.533869 | 5_3:+7135113 | Msa0795200:CDS |
AATAAACCTGTTAAAACCAT+AGG | 0.534613 | 5_3:-7134096 | None:intergenic |
CTTCGAAGATAGATTCTCAA+AGG | 0.539810 | 5_3:-7134483 | None:intergenic |
CATGCAACTGTTGCATCTAT+GGG | 0.545154 | 5_3:+7134837 | Msa0795200:CDS |
TGTCCACAAACAACTGTTTG+TGG | 0.548402 | 5_3:+7135140 | Msa0795200:CDS |
ACACCAAAACTCAAAGAAGA+AGG | 0.550180 | 5_3:-7134897 | None:intergenic |
AGACAAACCGAAATGCAGCT+TGG | 0.556967 | 5_3:-7134759 | None:intergenic |
TTCTTTGCATTGTTAAACCA+AGG | 0.562087 | 5_3:-7134299 | None:intergenic |
GGTGAGCTTGCTTTAGCAGG+TGG | 0.562489 | 5_3:+7134165 | Msa0795200:CDS |
CCATCCTTTGAAACAAGCAG+AGG | 0.563274 | 5_3:-7134712 | None:intergenic |
GTTATTGCTTTCATACAAAG+TGG | 0.571039 | 5_3:-7133908 | None:intergenic |
ATGTTGTTCCTTGGTCGTGT+TGG | 0.573577 | 5_3:+7134144 | Msa0795200:CDS |
CTGGAACACACAAGAAAACA+TGG | 0.574303 | 5_3:+7134679 | Msa0795200:CDS |
TGTTATGTTTGCAAATCCAA+TGG | 0.576457 | 5_3:-7134196 | None:intergenic |
TTCGAAGATAGATTCTCAAA+GGG | 0.581553 | 5_3:-7134482 | None:intergenic |
GAGGTTGAAATTCGTCCAAA+CGG | 0.590488 | 5_3:-7134625 | None:intergenic |
GTTGGGGATTTAGGGATCAA+CGG | 0.596686 | 5_3:-7134000 | None:intergenic |
TTTCGGTTTGTCTCGAATGG+TGG | 0.608886 | 5_3:+7134769 | Msa0795200:CDS |
ATGGGAATGGAACCTATTTG+TGG | 0.610601 | 5_3:+7134246 | Msa0795200:CDS |
AAATCAAGCAGAGAGAGCTA+AGG | 0.614779 | 5_3:+7135361 | Msa0795200:CDS |
ACAAATAGGTTCCATTCCCA+TGG | 0.616628 | 5_3:-7134244 | None:intergenic |
ACACACAAGAAAACATGGTG+TGG | 0.622763 | 5_3:+7134684 | Msa0795200:CDS |
ATTATCAACTCAAGTTCATG+TGG | 0.629140 | 5_3:+7135434 | Msa0795200:CDS |
CAAGCTCACCAACACGACCA+AGG | 0.635498 | 5_3:-7134152 | None:intergenic |
TTCATACAAAGTGGAGACAG+AGG | 0.650487 | 5_3:-7133899 | None:intergenic |
ATAGATGCAACAGTTGCATG+TGG | 0.665559 | 5_3:-7134834 | None:intergenic |
AAATAATCAGCGAGACAACG+AGG | 0.724832 | 5_3:-7134644 | None:intergenic |
TGATGATGATAACTTGCACA+TGG | 0.742527 | 5_3:-7133872 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTGTGGATATATTATTTGTT+TGG | - | chr5_3:7133936-7133955 | None:intergenic | 20.0% |
!!! | CAATTTTCATTTCATTCTTA+TGG | + | chr5_3:7134346-7134365 | Msa0795200:CDS | 20.0% |
!!! | AAGAGATTATTACTTTTATG+TGG | + | chr5_3:7134378-7134397 | Msa0795200:CDS | 20.0% |
!! | TTGACAAGAAAATAGTTTAT+AGG | - | chr5_3:7134567-7134586 | None:intergenic | 20.0% |
!! | AATAATTGCTTTAACATCAA+TGG | + | chr5_3:7135082-7135101 | Msa0795200:CDS | 20.0% |
!! | TTGTGGATATATTATTTGTT+TGG | - | chr5_3:7133936-7133955 | None:intergenic | 20.0% |
!!! | CAATTTTCATTTCATTCTTA+TGG | + | chr5_3:7134346-7134365 | Msa0795200:CDS | 20.0% |
!!! | AAGAGATTATTACTTTTATG+TGG | + | chr5_3:7134378-7134397 | Msa0795200:CDS | 20.0% |
!! | TTGACAAGAAAATAGTTTAT+AGG | - | chr5_3:7134567-7134586 | None:intergenic | 20.0% |
!! | AATAATTGCTTTAACATCAA+TGG | + | chr5_3:7135082-7135101 | Msa0795200:CDS | 20.0% |
!!! | ATTATTCTGTGTTTTGATTG+TGG | - | chr5_3:7133959-7133978 | None:intergenic | 25.0% |
!!! | TCTTTTGTTGTTTGAATGTT+GGG | - | chr5_3:7134020-7134039 | None:intergenic | 25.0% |
!!! | TTCTTTTGTTGTTTGAATGT+TGG | - | chr5_3:7134021-7134040 | None:intergenic | 25.0% |
!! | TGCTATGTTTGAAATATGTT+TGG | - | chr5_3:7134073-7134092 | None:intergenic | 25.0% |
! | AATAAACCTGTTAAAACCAT+AGG | - | chr5_3:7134099-7134118 | None:intergenic | 25.0% |
!! | ATTATTTACATTTGGGTTTC+TGG | + | chr5_3:7134660-7134679 | Msa0795200:CDS | 25.0% |
!! | AAATCATGATTTTGCTTTGT+GGG | + | chr5_3:7134799-7134818 | Msa0795200:CDS | 25.0% |
! | AAAAATGTATATCAATGCAG+TGG | - | chr5_3:7134877-7134896 | None:intergenic | 25.0% |
!! | CTTTTCTGTTAGAAACATTT+GGG | + | chr5_3:7135034-7135053 | Msa0795200:CDS | 25.0% |
! | GATGTTAAAGCAATTATTTG+TGG | - | chr5_3:7135080-7135099 | None:intergenic | 25.0% |
! | TTTATATTTGCGCCTAATTT+CGG | - | chr5_3:7135188-7135207 | None:intergenic | 25.0% |
! | TTAGGCGCAAATATAAATTT+AGG | + | chr5_3:7135191-7135210 | Msa0795200:CDS | 25.0% |
!!! | TTTAGGTTGTTTTTATCTTG+TGG | + | chr5_3:7135208-7135227 | Msa0795200:CDS | 25.0% |
!!! | TTAGGTTGTTTTTATCTTGT+GGG | + | chr5_3:7135209-7135228 | Msa0795200:CDS | 25.0% |
!!! | ATTATTCTGTGTTTTGATTG+TGG | - | chr5_3:7133959-7133978 | None:intergenic | 25.0% |
!!! | TCTTTTGTTGTTTGAATGTT+GGG | - | chr5_3:7134020-7134039 | None:intergenic | 25.0% |
!!! | TTCTTTTGTTGTTTGAATGT+TGG | - | chr5_3:7134021-7134040 | None:intergenic | 25.0% |
!! | TGCTATGTTTGAAATATGTT+TGG | - | chr5_3:7134073-7134092 | None:intergenic | 25.0% |
! | AATAAACCTGTTAAAACCAT+AGG | - | chr5_3:7134099-7134118 | None:intergenic | 25.0% |
!! | ATTATTTACATTTGGGTTTC+TGG | + | chr5_3:7134660-7134679 | Msa0795200:CDS | 25.0% |
!! | AAATCATGATTTTGCTTTGT+GGG | + | chr5_3:7134799-7134818 | Msa0795200:CDS | 25.0% |
! | AAAAATGTATATCAATGCAG+TGG | - | chr5_3:7134877-7134896 | None:intergenic | 25.0% |
!! | CTTTTCTGTTAGAAACATTT+GGG | + | chr5_3:7135034-7135053 | Msa0795200:CDS | 25.0% |
! | GATGTTAAAGCAATTATTTG+TGG | - | chr5_3:7135080-7135099 | None:intergenic | 25.0% |
! | TTTATATTTGCGCCTAATTT+CGG | - | chr5_3:7135188-7135207 | None:intergenic | 25.0% |
! | TTAGGCGCAAATATAAATTT+AGG | + | chr5_3:7135191-7135210 | Msa0795200:CDS | 25.0% |
!!! | TTTAGGTTGTTTTTATCTTG+TGG | + | chr5_3:7135208-7135227 | Msa0795200:CDS | 25.0% |
!!! | TTAGGTTGTTTTTATCTTGT+GGG | + | chr5_3:7135209-7135228 | Msa0795200:CDS | 25.0% |
GTTATTGCTTTCATACAAAG+TGG | - | chr5_3:7133911-7133930 | None:intergenic | 30.0% | |
!!! | CTTTTGTTGTTTGAATGTTG+GGG | - | chr5_3:7134019-7134038 | None:intergenic | 30.0% |
! | AATATGTTTGGCTTCATTGA+GGG | - | chr5_3:7134061-7134080 | None:intergenic | 30.0% |
! | AAATATGTTTGGCTTCATTG+AGG | - | chr5_3:7134062-7134081 | None:intergenic | 30.0% |
TTCAAACATAGCATTACCTA+TGG | + | chr5_3:7134080-7134099 | Msa0795200:CDS | 30.0% | |
AAGGAACAACATTGAAATGA+TGG | - | chr5_3:7134136-7134155 | None:intergenic | 30.0% | |
ATCATTTCAATGTTGTTCCT+TGG | + | chr5_3:7134135-7134154 | Msa0795200:CDS | 30.0% | |
TGTTATGTTTGCAAATCCAA+TGG | - | chr5_3:7134199-7134218 | None:intergenic | 30.0% | |
ATTGGATTTGCAAACATAAC+AGG | + | chr5_3:7134198-7134217 | Msa0795200:CDS | 30.0% | |
TTCTTTGCATTGTTAAACCA+AGG | - | chr5_3:7134302-7134321 | None:intergenic | 30.0% | |
TTCGAAGATAGATTCTCAAA+GGG | - | chr5_3:7134485-7134504 | None:intergenic | 30.0% | |
!! | TTAAAGGAAGTGTTATGGAT+TGG | - | chr5_3:7134509-7134528 | None:intergenic | 30.0% |
!! | GTATGTTAAAGGAAGTGTTA+TGG | - | chr5_3:7134514-7134533 | None:intergenic | 30.0% |
AAAGTAGCACTGTATGTTAA+AGG | - | chr5_3:7134525-7134544 | None:intergenic | 30.0% | |
TCTTGTCAATGTTCTTCAAT+TGG | + | chr5_3:7134578-7134597 | Msa0795200:CDS | 30.0% | |
CTTGTCAATGTTCTTCAATT+GGG | + | chr5_3:7134579-7134598 | Msa0795200:CDS | 30.0% | |
! | TCTCGCTGATTATTTACATT+TGG | + | chr5_3:7134652-7134671 | Msa0795200:CDS | 30.0% |
! | CTCGCTGATTATTTACATTT+GGG | + | chr5_3:7134653-7134672 | Msa0795200:CDS | 30.0% |
! | GAAATCATGATTTTGCTTTG+TGG | + | chr5_3:7134798-7134817 | Msa0795200:CDS | 30.0% |
!! | TTTCCTTCTTCTTTGAGTTT+TGG | + | chr5_3:7134894-7134913 | Msa0795200:CDS | 30.0% |
!!! | ACTCTGTTTCAGTTTTGTTT+TGG | + | chr5_3:7134989-7135008 | Msa0795200:CDS | 30.0% |
!!! | CTCTGTTTCAGTTTTGTTTT+GGG | + | chr5_3:7134990-7135009 | Msa0795200:CDS | 30.0% |
! | CCAAATGTTTCTAACAGAAA+AGG | - | chr5_3:7135036-7135055 | None:intergenic | 30.0% |
! | CCTTTTCTGTTAGAAACATT+TGG | + | chr5_3:7135033-7135052 | Msa0795200:CDS | 30.0% |
! | TTTGCTGGATTTGATTTCAA+AGG | + | chr5_3:7135260-7135279 | Msa0795200:CDS | 30.0% |
! | GATTTGATTTCAAAGGTTTG+TGG | + | chr5_3:7135267-7135286 | Msa0795200:CDS | 30.0% |
!! | GGTTACAATGTTGTTTGTTT+TGG | + | chr5_3:7135322-7135341 | Msa0795200:CDS | 30.0% |
!!! | TTGTTTTGGTTCGTACAAAT+TGG | + | chr5_3:7135336-7135355 | Msa0795200:CDS | 30.0% |
!!! | TGTTTTGGTTCGTACAAATT+GGG | + | chr5_3:7135337-7135356 | Msa0795200:CDS | 30.0% |
ATTATCAACTCAAGTTCATG+TGG | + | chr5_3:7135434-7135453 | Msa0795200:CDS | 30.0% | |
GTTATTGCTTTCATACAAAG+TGG | - | chr5_3:7133911-7133930 | None:intergenic | 30.0% | |
!!! | CTTTTGTTGTTTGAATGTTG+GGG | - | chr5_3:7134019-7134038 | None:intergenic | 30.0% |
! | AATATGTTTGGCTTCATTGA+GGG | - | chr5_3:7134061-7134080 | None:intergenic | 30.0% |
! | AAATATGTTTGGCTTCATTG+AGG | - | chr5_3:7134062-7134081 | None:intergenic | 30.0% |
TTCAAACATAGCATTACCTA+TGG | + | chr5_3:7134080-7134099 | Msa0795200:CDS | 30.0% | |
AAGGAACAACATTGAAATGA+TGG | - | chr5_3:7134136-7134155 | None:intergenic | 30.0% | |
ATCATTTCAATGTTGTTCCT+TGG | + | chr5_3:7134135-7134154 | Msa0795200:CDS | 30.0% | |
TGTTATGTTTGCAAATCCAA+TGG | - | chr5_3:7134199-7134218 | None:intergenic | 30.0% | |
ATTGGATTTGCAAACATAAC+AGG | + | chr5_3:7134198-7134217 | Msa0795200:CDS | 30.0% | |
TTCTTTGCATTGTTAAACCA+AGG | - | chr5_3:7134302-7134321 | None:intergenic | 30.0% | |
TTCGAAGATAGATTCTCAAA+GGG | - | chr5_3:7134485-7134504 | None:intergenic | 30.0% | |
!! | TTAAAGGAAGTGTTATGGAT+TGG | - | chr5_3:7134509-7134528 | None:intergenic | 30.0% |
!! | GTATGTTAAAGGAAGTGTTA+TGG | - | chr5_3:7134514-7134533 | None:intergenic | 30.0% |
AAAGTAGCACTGTATGTTAA+AGG | - | chr5_3:7134525-7134544 | None:intergenic | 30.0% | |
TCTTGTCAATGTTCTTCAAT+TGG | + | chr5_3:7134578-7134597 | Msa0795200:CDS | 30.0% | |
CTTGTCAATGTTCTTCAATT+GGG | + | chr5_3:7134579-7134598 | Msa0795200:CDS | 30.0% | |
! | TCTCGCTGATTATTTACATT+TGG | + | chr5_3:7134652-7134671 | Msa0795200:CDS | 30.0% |
! | CTCGCTGATTATTTACATTT+GGG | + | chr5_3:7134653-7134672 | Msa0795200:CDS | 30.0% |
! | GAAATCATGATTTTGCTTTG+TGG | + | chr5_3:7134798-7134817 | Msa0795200:CDS | 30.0% |
!! | TTTCCTTCTTCTTTGAGTTT+TGG | + | chr5_3:7134894-7134913 | Msa0795200:CDS | 30.0% |
!!! | ACTCTGTTTCAGTTTTGTTT+TGG | + | chr5_3:7134989-7135008 | Msa0795200:CDS | 30.0% |
!!! | CTCTGTTTCAGTTTTGTTTT+GGG | + | chr5_3:7134990-7135009 | Msa0795200:CDS | 30.0% |
! | CCAAATGTTTCTAACAGAAA+AGG | - | chr5_3:7135036-7135055 | None:intergenic | 30.0% |
! | CCTTTTCTGTTAGAAACATT+TGG | + | chr5_3:7135033-7135052 | Msa0795200:CDS | 30.0% |
! | TTTGCTGGATTTGATTTCAA+AGG | + | chr5_3:7135260-7135279 | Msa0795200:CDS | 30.0% |
! | GATTTGATTTCAAAGGTTTG+TGG | + | chr5_3:7135267-7135286 | Msa0795200:CDS | 30.0% |
!! | GGTTACAATGTTGTTTGTTT+TGG | + | chr5_3:7135322-7135341 | Msa0795200:CDS | 30.0% |
!!! | TTGTTTTGGTTCGTACAAAT+TGG | + | chr5_3:7135336-7135355 | Msa0795200:CDS | 30.0% |
!!! | TGTTTTGGTTCGTACAAATT+GGG | + | chr5_3:7135337-7135356 | Msa0795200:CDS | 30.0% |
ATTATCAACTCAAGTTCATG+TGG | + | chr5_3:7135434-7135453 | Msa0795200:CDS | 30.0% | |
GTTTGAATGTTGGGGATTTA+GGG | - | chr5_3:7134011-7134030 | None:intergenic | 35.0% | |
TGTTTGAATGTTGGGGATTT+AGG | - | chr5_3:7134012-7134031 | None:intergenic | 35.0% | |
ATTGAGGGCAAGAGAAAAAT+GGG | - | chr5_3:7134046-7134065 | None:intergenic | 35.0% | |
!!! | GCATTACCTATGGTTTTAAC+AGG | + | chr5_3:7134090-7134109 | Msa0795200:CDS | 35.0% |
GCTAAAAGATTCAAACTCCT+TGG | + | chr5_3:7134282-7134301 | Msa0795200:CDS | 35.0% | |
!! | CGTTTGCTATATCTTCTTGT+TGG | - | chr5_3:7134404-7134423 | None:intergenic | 35.0% |
AATGATTGTGCTACAAGATC+AGG | - | chr5_3:7134456-7134475 | None:intergenic | 35.0% | |
CTTCGAAGATAGATTCTCAA+AGG | - | chr5_3:7134486-7134505 | None:intergenic | 35.0% | |
GTTCTTCAATTGGGAATAAG+AGG | + | chr5_3:7134588-7134607 | Msa0795200:CDS | 35.0% | |
ATTTCCTCTGCTTGTTTCAA+AGG | + | chr5_3:7134708-7134727 | Msa0795200:CDS | 35.0% | |
ACACCAAAACTCAAAGAAGA+AGG | - | chr5_3:7134900-7134919 | None:intergenic | 35.0% | |
!! | TTTGGTGTTTCAACAAGAGT+TGG | + | chr5_3:7134912-7134931 | Msa0795200:CDS | 35.0% |
ACAAGAGTTGGAAATGAACT+TGG | + | chr5_3:7134924-7134943 | Msa0795200:CDS | 35.0% | |
!!! | CTGCAAGTTTTGCTTTTTGT+GGG | - | chr5_3:7134959-7134978 | None:intergenic | 35.0% |
AGAAAAGGCGAAAAACAAAG+CGG | - | chr5_3:7135021-7135040 | None:intergenic | 35.0% | |
!! | TCAATGGTGTTACCGATTAT+AGG | + | chr5_3:7135098-7135117 | Msa0795200:CDS | 35.0% |
AGCTCACATAGTCCTATAAT+CGG | - | chr5_3:7135113-7135132 | None:intergenic | 35.0% | |
ATTATAGGACTATGTGAGCT+TGG | + | chr5_3:7135113-7135132 | Msa0795200:CDS | 35.0% | |
!! | AACTGTTTGTGGTGTTTTGA+GGG | + | chr5_3:7135151-7135170 | Msa0795200:CDS | 35.0% |
GATTTCAAAGGTTTGTGGTT+TGG | + | chr5_3:7135272-7135291 | Msa0795200:CDS | 35.0% | |
TTCAAGTGAAGAAGAACAAG+AGG | + | chr5_3:7135400-7135419 | Msa0795200:CDS | 35.0% | |
GTTTGAATGTTGGGGATTTA+GGG | - | chr5_3:7134011-7134030 | None:intergenic | 35.0% | |
TGTTTGAATGTTGGGGATTT+AGG | - | chr5_3:7134012-7134031 | None:intergenic | 35.0% | |
ATTGAGGGCAAGAGAAAAAT+GGG | - | chr5_3:7134046-7134065 | None:intergenic | 35.0% | |
!!! | GCATTACCTATGGTTTTAAC+AGG | + | chr5_3:7134090-7134109 | Msa0795200:CDS | 35.0% |
GCTAAAAGATTCAAACTCCT+TGG | + | chr5_3:7134282-7134301 | Msa0795200:CDS | 35.0% | |
!! | CGTTTGCTATATCTTCTTGT+TGG | - | chr5_3:7134404-7134423 | None:intergenic | 35.0% |
AATGATTGTGCTACAAGATC+AGG | - | chr5_3:7134456-7134475 | None:intergenic | 35.0% | |
CTTCGAAGATAGATTCTCAA+AGG | - | chr5_3:7134486-7134505 | None:intergenic | 35.0% | |
GTTCTTCAATTGGGAATAAG+AGG | + | chr5_3:7134588-7134607 | Msa0795200:CDS | 35.0% | |
ATTTCCTCTGCTTGTTTCAA+AGG | + | chr5_3:7134708-7134727 | Msa0795200:CDS | 35.0% | |
ACACCAAAACTCAAAGAAGA+AGG | - | chr5_3:7134900-7134919 | None:intergenic | 35.0% | |
!! | TTTGGTGTTTCAACAAGAGT+TGG | + | chr5_3:7134912-7134931 | Msa0795200:CDS | 35.0% |
ACAAGAGTTGGAAATGAACT+TGG | + | chr5_3:7134924-7134943 | Msa0795200:CDS | 35.0% | |
!!! | CTGCAAGTTTTGCTTTTTGT+GGG | - | chr5_3:7134959-7134978 | None:intergenic | 35.0% |
AGAAAAGGCGAAAAACAAAG+CGG | - | chr5_3:7135021-7135040 | None:intergenic | 35.0% | |
!! | TCAATGGTGTTACCGATTAT+AGG | + | chr5_3:7135098-7135117 | Msa0795200:CDS | 35.0% |
AGCTCACATAGTCCTATAAT+CGG | - | chr5_3:7135113-7135132 | None:intergenic | 35.0% | |
ATTATAGGACTATGTGAGCT+TGG | + | chr5_3:7135113-7135132 | Msa0795200:CDS | 35.0% | |
!! | AACTGTTTGTGGTGTTTTGA+GGG | + | chr5_3:7135151-7135170 | Msa0795200:CDS | 35.0% |
GATTTCAAAGGTTTGTGGTT+TGG | + | chr5_3:7135272-7135291 | Msa0795200:CDS | 35.0% | |
TTCAAGTGAAGAAGAACAAG+AGG | + | chr5_3:7135400-7135419 | Msa0795200:CDS | 35.0% | |
TTCATACAAAGTGGAGACAG+AGG | - | chr5_3:7133902-7133921 | None:intergenic | 40.0% | |
!!! | CTGTGTTTTGATTGTGGTTG+TGG | - | chr5_3:7133953-7133972 | None:intergenic | 40.0% |
! | ATCAACGGTGTTAACATGTC+AGG | - | chr5_3:7133988-7134007 | None:intergenic | 40.0% |
CATTGAGGGCAAGAGAAAAA+TGG | - | chr5_3:7134047-7134066 | None:intergenic | 40.0% | |
ACAAATAGGTTCCATTCCCA+TGG | - | chr5_3:7134247-7134266 | None:intergenic | 40.0% | |
ATGGGAATGGAACCTATTTG+TGG | + | chr5_3:7134246-7134265 | Msa0795200:CDS | 40.0% | |
CCAAAAGCTTGACCACAAAT+AGG | - | chr5_3:7134261-7134280 | None:intergenic | 40.0% | |
! | CCTATTTGTGGTCAAGCTTT+TGG | + | chr5_3:7134258-7134277 | Msa0795200:CDS | 40.0% |
GGAATAAGAGGAATCGCTTT+AGG | + | chr5_3:7134600-7134619 | Msa0795200:CDS | 40.0% | |
GAGGTTGAAATTCGTCCAAA+CGG | - | chr5_3:7134628-7134647 | None:intergenic | 40.0% | |
AAATAATCAGCGAGACAACG+AGG | - | chr5_3:7134647-7134666 | None:intergenic | 40.0% | |
CTGGAACACACAAGAAAACA+TGG | + | chr5_3:7134679-7134698 | Msa0795200:CDS | 40.0% | |
ACACACAAGAAAACATGGTG+TGG | + | chr5_3:7134684-7134703 | Msa0795200:CDS | 40.0% | |
AGCAATTCCAAGCTGCATTT+CGG | + | chr5_3:7134752-7134771 | Msa0795200:CDS | 40.0% | |
ATAGATGCAACAGTTGCATG+TGG | - | chr5_3:7134837-7134856 | None:intergenic | 40.0% | |
ACATGCAACTGTTGCATCTA+TGG | + | chr5_3:7134836-7134855 | Msa0795200:CDS | 40.0% | |
CATGCAACTGTTGCATCTAT+GGG | + | chr5_3:7134837-7134856 | Msa0795200:CDS | 40.0% | |
!!! | GCTGCAAGTTTTGCTTTTTG+TGG | - | chr5_3:7134960-7134979 | None:intergenic | 40.0% |
GCAAAACTTGCAGCAATAGT+TGG | + | chr5_3:7134966-7134985 | Msa0795200:CDS | 40.0% | |
TGTCCACAAACAACTGTTTG+TGG | + | chr5_3:7135140-7135159 | Msa0795200:CDS | 40.0% | |
ACACCACAAACAGTTGTTTG+TGG | - | chr5_3:7135146-7135165 | None:intergenic | 40.0% | |
! | CAACTGTTTGTGGTGTTTTG+AGG | + | chr5_3:7135150-7135169 | Msa0795200:CDS | 40.0% |
!! | ACTGTTTGTGGTGTTTTGAG+GGG | + | chr5_3:7135152-7135171 | Msa0795200:CDS | 40.0% |
AAACTCAACCAAACTGCAAC+AGG | - | chr5_3:7135239-7135258 | None:intergenic | 40.0% | |
GTTTGGTTGAGTTTCTTTGC+TGG | + | chr5_3:7135245-7135264 | Msa0795200:CDS | 40.0% | |
!! | AGGTTTGTGGTTTGGTCTTA+TGG | + | chr5_3:7135280-7135299 | Msa0795200:CDS | 40.0% |
AAATCAAGCAGAGAGAGCTA+AGG | + | chr5_3:7135361-7135380 | Msa0795200:CDS | 40.0% | |
TTCATACAAAGTGGAGACAG+AGG | - | chr5_3:7133902-7133921 | None:intergenic | 40.0% | |
!!! | CTGTGTTTTGATTGTGGTTG+TGG | - | chr5_3:7133953-7133972 | None:intergenic | 40.0% |
! | ATCAACGGTGTTAACATGTC+AGG | - | chr5_3:7133988-7134007 | None:intergenic | 40.0% |
CATTGAGGGCAAGAGAAAAA+TGG | - | chr5_3:7134047-7134066 | None:intergenic | 40.0% | |
ACAAATAGGTTCCATTCCCA+TGG | - | chr5_3:7134247-7134266 | None:intergenic | 40.0% | |
ATGGGAATGGAACCTATTTG+TGG | + | chr5_3:7134246-7134265 | Msa0795200:CDS | 40.0% | |
CCAAAAGCTTGACCACAAAT+AGG | - | chr5_3:7134261-7134280 | None:intergenic | 40.0% | |
! | CCTATTTGTGGTCAAGCTTT+TGG | + | chr5_3:7134258-7134277 | Msa0795200:CDS | 40.0% |
GGAATAAGAGGAATCGCTTT+AGG | + | chr5_3:7134600-7134619 | Msa0795200:CDS | 40.0% | |
GAGGTTGAAATTCGTCCAAA+CGG | - | chr5_3:7134628-7134647 | None:intergenic | 40.0% | |
AAATAATCAGCGAGACAACG+AGG | - | chr5_3:7134647-7134666 | None:intergenic | 40.0% | |
CTGGAACACACAAGAAAACA+TGG | + | chr5_3:7134679-7134698 | Msa0795200:CDS | 40.0% | |
ACACACAAGAAAACATGGTG+TGG | + | chr5_3:7134684-7134703 | Msa0795200:CDS | 40.0% | |
AGCAATTCCAAGCTGCATTT+CGG | + | chr5_3:7134752-7134771 | Msa0795200:CDS | 40.0% | |
ATAGATGCAACAGTTGCATG+TGG | - | chr5_3:7134837-7134856 | None:intergenic | 40.0% | |
ACATGCAACTGTTGCATCTA+TGG | + | chr5_3:7134836-7134855 | Msa0795200:CDS | 40.0% | |
CATGCAACTGTTGCATCTAT+GGG | + | chr5_3:7134837-7134856 | Msa0795200:CDS | 40.0% | |
!!! | GCTGCAAGTTTTGCTTTTTG+TGG | - | chr5_3:7134960-7134979 | None:intergenic | 40.0% |
GCAAAACTTGCAGCAATAGT+TGG | + | chr5_3:7134966-7134985 | Msa0795200:CDS | 40.0% | |
TGTCCACAAACAACTGTTTG+TGG | + | chr5_3:7135140-7135159 | Msa0795200:CDS | 40.0% | |
ACACCACAAACAGTTGTTTG+TGG | - | chr5_3:7135146-7135165 | None:intergenic | 40.0% | |
! | CAACTGTTTGTGGTGTTTTG+AGG | + | chr5_3:7135150-7135169 | Msa0795200:CDS | 40.0% |
!! | ACTGTTTGTGGTGTTTTGAG+GGG | + | chr5_3:7135152-7135171 | Msa0795200:CDS | 40.0% |
AAACTCAACCAAACTGCAAC+AGG | - | chr5_3:7135239-7135258 | None:intergenic | 40.0% | |
GTTTGGTTGAGTTTCTTTGC+TGG | + | chr5_3:7135245-7135264 | Msa0795200:CDS | 40.0% | |
!! | AGGTTTGTGGTTTGGTCTTA+TGG | + | chr5_3:7135280-7135299 | Msa0795200:CDS | 40.0% |
AAATCAAGCAGAGAGAGCTA+AGG | + | chr5_3:7135361-7135380 | Msa0795200:CDS | 40.0% | |
GTTGGGGATTTAGGGATCAA+CGG | - | chr5_3:7134003-7134022 | None:intergenic | 45.0% | |
ATGTTGTTCCTTGGTCGTGT+TGG | + | chr5_3:7134144-7134163 | Msa0795200:CDS | 45.0% | |
ACAGGTTACTCCATTCTCTC+TGG | + | chr5_3:7134216-7134235 | Msa0795200:CDS | 45.0% | |
!! | ATTCTCTCTGGTCTTGCCAT+GGG | + | chr5_3:7134228-7134247 | Msa0795200:CDS | 45.0% |
! | GAATCGCTTTAGGTTCCGTT+TGG | + | chr5_3:7134610-7134629 | Msa0795200:CDS | 45.0% |
!! | CCATCCTTTGAAACAAGCAG+AGG | - | chr5_3:7134715-7134734 | None:intergenic | 45.0% |
CCTCTGCTTGTTTCAAAGGA+TGG | + | chr5_3:7134712-7134731 | Msa0795200:CDS | 45.0% | |
AGACAAACCGAAATGCAGCT+TGG | - | chr5_3:7134762-7134781 | None:intergenic | 45.0% | |
! | GCATTTCGGTTTGTCTCGAA+TGG | + | chr5_3:7134766-7134785 | Msa0795200:CDS | 45.0% |
! | TTTCGGTTTGTCTCGAATGG+TGG | + | chr5_3:7134769-7134788 | Msa0795200:CDS | 45.0% |
!!! | TTGTGGTGTTTTGAGGGGAA+CGG | + | chr5_3:7135157-7135176 | Msa0795200:CDS | 45.0% |
!! | TTTGGTCTTATGGCTGCTCA+AGG | + | chr5_3:7135290-7135309 | Msa0795200:CDS | 45.0% |
GTTGGGGATTTAGGGATCAA+CGG | - | chr5_3:7134003-7134022 | None:intergenic | 45.0% | |
ATGTTGTTCCTTGGTCGTGT+TGG | + | chr5_3:7134144-7134163 | Msa0795200:CDS | 45.0% | |
ACAGGTTACTCCATTCTCTC+TGG | + | chr5_3:7134216-7134235 | Msa0795200:CDS | 45.0% | |
!! | ATTCTCTCTGGTCTTGCCAT+GGG | + | chr5_3:7134228-7134247 | Msa0795200:CDS | 45.0% |
! | GAATCGCTTTAGGTTCCGTT+TGG | + | chr5_3:7134610-7134629 | Msa0795200:CDS | 45.0% |
!! | CCATCCTTTGAAACAAGCAG+AGG | - | chr5_3:7134715-7134734 | None:intergenic | 45.0% |
CCTCTGCTTGTTTCAAAGGA+TGG | + | chr5_3:7134712-7134731 | Msa0795200:CDS | 45.0% | |
AGACAAACCGAAATGCAGCT+TGG | - | chr5_3:7134762-7134781 | None:intergenic | 45.0% | |
! | GCATTTCGGTTTGTCTCGAA+TGG | + | chr5_3:7134766-7134785 | Msa0795200:CDS | 45.0% |
! | TTTCGGTTTGTCTCGAATGG+TGG | + | chr5_3:7134769-7134788 | Msa0795200:CDS | 45.0% |
!!! | TTGTGGTGTTTTGAGGGGAA+CGG | + | chr5_3:7135157-7135176 | Msa0795200:CDS | 45.0% |
!! | TTTGGTCTTATGGCTGCTCA+AGG | + | chr5_3:7135290-7135309 | Msa0795200:CDS | 45.0% |
! | GTTGGTGAGCTTGCTTTAGC+AGG | + | chr5_3:7134162-7134181 | Msa0795200:CDS | 50.0% |
! | GTGAGCTTGCTTTAGCAGGT+GGG | + | chr5_3:7134166-7134185 | Msa0795200:CDS | 50.0% |
CATGGCAAGACCAGAGAGAA+TGG | - | chr5_3:7134229-7134248 | None:intergenic | 50.0% | |
!! | CATTCTCTCTGGTCTTGCCA+TGG | + | chr5_3:7134227-7134246 | Msa0795200:CDS | 50.0% |
TGGGAATGCCTGTTGCAGTT+TGG | + | chr5_3:7135228-7135247 | Msa0795200:CDS | 50.0% | |
GGCTGCTCAAGGTTCATGTA+TGG | + | chr5_3:7135301-7135320 | Msa0795200:CDS | 50.0% | |
! | GTTGGTGAGCTTGCTTTAGC+AGG | + | chr5_3:7134162-7134181 | Msa0795200:CDS | 50.0% |
! | GTGAGCTTGCTTTAGCAGGT+GGG | + | chr5_3:7134166-7134185 | Msa0795200:CDS | 50.0% |
CATGGCAAGACCAGAGAGAA+TGG | - | chr5_3:7134229-7134248 | None:intergenic | 50.0% | |
!! | CATTCTCTCTGGTCTTGCCA+TGG | + | chr5_3:7134227-7134246 | Msa0795200:CDS | 50.0% |
TGGGAATGCCTGTTGCAGTT+TGG | + | chr5_3:7135228-7135247 | Msa0795200:CDS | 50.0% | |
GGCTGCTCAAGGTTCATGTA+TGG | + | chr5_3:7135301-7135320 | Msa0795200:CDS | 50.0% | |
CAAGCTCACCAACACGACCA+AGG | - | chr5_3:7134155-7134174 | None:intergenic | 55.0% | |
! | GGTGAGCTTGCTTTAGCAGG+TGG | + | chr5_3:7134165-7134184 | Msa0795200:CDS | 55.0% |
!! | CTCTGGTCTTGCCATGGGAA+TGG | + | chr5_3:7134233-7134252 | Msa0795200:CDS | 55.0% |
CGGTTTGTCTCGAATGGTGG+TGG | + | chr5_3:7134772-7134791 | Msa0795200:CDS | 55.0% | |
CAAGCTCACCAACACGACCA+AGG | - | chr5_3:7134155-7134174 | None:intergenic | 55.0% | |
! | GGTGAGCTTGCTTTAGCAGG+TGG | + | chr5_3:7134165-7134184 | Msa0795200:CDS | 55.0% |
!! | CTCTGGTCTTGCCATGGGAA+TGG | + | chr5_3:7134233-7134252 | Msa0795200:CDS | 55.0% |
CGGTTTGTCTCGAATGGTGG+TGG | + | chr5_3:7134772-7134791 | Msa0795200:CDS | 55.0% | |
GCAGGTGGGTCACTTGCCAT+TGG | + | chr5_3:7134180-7134199 | Msa0795200:CDS | 60.0% | |
!!! | GTGTTTTGAGGGGAACGGCG+AGG | + | chr5_3:7135162-7135181 | Msa0795200:CDS | 60.0% |
GGAACGGCGAGGCCGAAATT+AGG | + | chr5_3:7135173-7135192 | Msa0795200:CDS | 60.0% | |
GCAGGTGGGTCACTTGCCAT+TGG | + | chr5_3:7134180-7134199 | Msa0795200:CDS | 60.0% | |
!!! | GTGTTTTGAGGGGAACGGCG+AGG | + | chr5_3:7135162-7135181 | Msa0795200:CDS | 60.0% |
GGAACGGCGAGGCCGAAATT+AGG | + | chr5_3:7135173-7135192 | Msa0795200:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 7133874 | 7135487 | 7133874 | ID=Msa0795200;Name=Msa0795200 |
chr5_3 | mRNA | 7133874 | 7135487 | 7133874 | ID=Msa0795200-mRNA-1;Parent=Msa0795200;Name=Msa0795200-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|537 |
chr5_3 | exon | 7133874 | 7135487 | 7133874 | ID=Msa0795200-mRNA-1:exon:2891;Parent=Msa0795200-mRNA-1 |
chr5_3 | CDS | 7133874 | 7135487 | 7133874 | ID=Msa0795200-mRNA-1:cds;Parent=Msa0795200-mRNA-1 |
Gene Sequence |
Protein sequence |