Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754900 | sp|Q8W4H1|GAT26_ARATH | 47.184 | 515 | 198 | 13 | 1 | 448 | 1 | 508 | 4.48e-122 | 369 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754900 | G7JYK7 | 92.385 | 499 | 10 | 1 | 1 | 471 | 1 | 499 | 0.0 | 947 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0754900 | TF | C2C2-GATA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0754900 | Msa0796870 | 0.943672 | 7.882627e-103 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754900 | MtrunA17_Chr4g0055611 | 57.707 | 532 | 146 | 11 | 1 | 457 | 1 | 528 | 0.0 | 524 |
| Msa0754900 | MtrunA17_Chr5g0399781 | 96.109 | 257 | 9 | 1 | 1 | 257 | 1 | 256 | 0.0 | 517 |
| Msa0754900 | MtrunA17_Chr5g0399791 | 97.297 | 222 | 6 | 0 | 250 | 471 | 33 | 254 | 6.68e-158 | 447 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754900 | AT4G17570.3 | 47.767 | 515 | 199 | 12 | 1 | 448 | 1 | 512 | 5.66e-128 | 381 |
| Msa0754900 | AT4G17570.1 | 47.184 | 515 | 198 | 13 | 1 | 448 | 1 | 508 | 4.55e-123 | 369 |
| Msa0754900 | AT4G17570.2 | 46.707 | 501 | 197 | 12 | 15 | 448 | 27 | 524 | 8.67e-116 | 350 |
| Msa0754900 | AT5G47140.1 | 45.825 | 491 | 200 | 12 | 1 | 448 | 1 | 468 | 5.53e-112 | 339 |
Find 103 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGTAATGTGTTACTTAA+TGG | 0.115400 | 5_2:-8619791 | None:intergenic |
| TTTGCAACCTATCATATTTC+AGG | 0.197645 | 5_2:+8615044 | Msa0754900:five_prime_UTR |
| AGTCTTTGTGATAATTCTTT+TGG | 0.200744 | 5_2:-8619553 | None:intergenic |
| ATTACAATAATTAATTAAAA+TGG | 0.207776 | 5_2:-8615086 | None:intergenic |
| TATCTTCATCAAAAGCCTTT+TGG | 0.231803 | 5_2:-8616852 | None:intergenic |
| GATTGTCAAGGATTTGAAAT+TGG | 0.267403 | 5_2:+8619899 | Msa0754900:three_prime_UTR |
| AGCTCTCTTTCATTTGATAA+TGG | 0.271694 | 5_2:+8618028 | Msa0754900:CDS |
| CGCCTTTGATATCTCTTTGC+CGG | 0.285823 | 5_2:+8618843 | Msa0754900:CDS |
| TTCAAAGTCTCGCAGTCTTC+AGG | 0.296864 | 5_2:-8618874 | None:intergenic |
| ACCAAATTGTGCGCAGCTTT+CGG | 0.305747 | 5_2:-8616914 | None:intergenic |
| AGTGACGCATATTCTTATTC+TGG | 0.322140 | 5_2:+8618064 | Msa0754900:CDS |
| CATCAGGAGGCAAAGGAAAT+AGG | 0.324121 | 5_2:-8619593 | None:intergenic |
| ATTGATGTATATGTTATAGA+TGG | 0.335555 | 5_2:-8614909 | None:intergenic |
| TCCGAAAGCTGCGCACAATT+TGG | 0.336033 | 5_2:+8616913 | Msa0754900:CDS |
| GACCTGCTCAGTCAGTGGTC+TGG | 0.355510 | 5_2:+8617756 | Msa0754900:CDS |
| AACCACTATAATGTAGTATC+TGG | 0.362580 | 5_2:+8616799 | Msa0754900:CDS |
| ACCTGCTCAGTCAGTGGTCT+GGG | 0.368180 | 5_2:+8617757 | Msa0754900:CDS |
| TTGTTGTTTGTGCAGCCTTA+AGG | 0.373323 | 5_2:+8618756 | Msa0754900:intron |
| ATGAGTTGTCAAAGTCGAAA+TGG | 0.378385 | 5_2:+8618911 | Msa0754900:CDS |
| TAAGAATATGCGTCACTCAT+TGG | 0.378524 | 5_2:-8618058 | None:intergenic |
| AGCAGAAATCAGAACTTTCC+AGG | 0.401146 | 5_2:+8619139 | Msa0754900:CDS |
| AAGAATATGCGTCACTCATT+GGG | 0.411487 | 5_2:-8618057 | None:intergenic |
| TTGCATAGTATTGGCTTCTC+TGG | 0.427042 | 5_2:-8616616 | None:intergenic |
| GCACACCACTTTGGCGCAAT+GGG | 0.430676 | 5_2:+8616590 | Msa0754900:CDS |
| CCACATGCATTGCATAGTAT+TGG | 0.431658 | 5_2:-8616625 | None:intergenic |
| ATGAGTAATCGATCAAGTTC+AGG | 0.432484 | 5_2:+8616874 | Msa0754900:CDS |
| CCGATGGTCTCTGTCGAGAT+AGG | 0.442024 | 5_2:+8617944 | Msa0754900:CDS |
| TAGCAAACCTGAAATATGAT+AGG | 0.442495 | 5_2:-8615051 | None:intergenic |
| TTACACACCTTTACATGCTC+GGG | 0.442559 | 5_2:+8616681 | Msa0754900:CDS |
| CTGCACCCAACTTCATACTT+TGG | 0.442894 | 5_2:+8619720 | Msa0754900:CDS |
| GTCAAGGATTTGAAATTGGA+TGG | 0.445749 | 5_2:+8619903 | Msa0754900:three_prime_UTR |
| TTTCAGCAGCTTCTTGCAAA+AGG | 0.446745 | 5_2:+8618820 | Msa0754900:CDS |
| TCTCTTCACATTTGCAACAT+TGG | 0.446975 | 5_2:-8619107 | None:intergenic |
| CCATTAAGTAACACATTACA+AGG | 0.451212 | 5_2:+8619791 | Msa0754900:exon |
| ATGCATGTGGTTCGCGGTGG+AGG | 0.452122 | 5_2:+8616638 | Msa0754900:CDS |
| GTGAGCTTCTCAACAGAAGA+TGG | 0.452294 | 5_2:-8617836 | None:intergenic |
| AGCAAGTGTGAGCTTGCATC+AGG | 0.455435 | 5_2:-8619609 | None:intergenic |
| TGCAGCCTTAAGGTCATGTT+CGG | 0.457133 | 5_2:+8618766 | Msa0754900:intron |
| AAGAAGTGAACTTGCTCAAA+CGG | 0.458776 | 5_2:+8616770 | Msa0754900:CDS |
| ATTACACACCTTTACATGCT+CGG | 0.466186 | 5_2:+8616680 | Msa0754900:CDS |
| GGCACACCACTTTGGCGCAA+TGG | 0.466586 | 5_2:+8616589 | Msa0754900:intron |
| TGCGGAAAAGAATTATTAGA+AGG | 0.469116 | 5_2:-8619687 | None:intergenic |
| TTGATGATCAAAGGGCTTCA+AGG | 0.472955 | 5_2:+8616719 | Msa0754900:CDS |
| GTTCGGTAGCTCTCAATTCA+AGG | 0.476255 | 5_2:+8618783 | Msa0754900:CDS |
| ACAGATGCTAGTGATCTAAC+AGG | 0.476473 | 5_2:+8616940 | Msa0754900:CDS |
| AAAACAGTAACTAGAATTGA+AGG | 0.479850 | 5_2:-8614933 | None:intergenic |
| TGAGCACCAAAGTATGAAGT+TGG | 0.490384 | 5_2:-8619726 | None:intergenic |
| GAGTAGAATTCTAACCCATC+AGG | 0.493607 | 5_2:-8618629 | None:intergenic |
| TTGCAACAGGCACACCACTT+TGG | 0.494644 | 5_2:+8616581 | Msa0754900:intron |
| TGAGTTGTCAAAGTCGAAAT+GGG | 0.496810 | 5_2:+8618912 | Msa0754900:CDS |
| GATGCTATACCAGCAGATCC+TGG | 0.497891 | 5_2:-8619082 | None:intergenic |
| TCGGATGTTCCAGGATCTGC+TGG | 0.499260 | 5_2:+8619073 | Msa0754900:CDS |
| TGAGAAATGGTTGTGAAAAG+TGG | 0.500096 | 5_2:-8614839 | None:intergenic |
| CGATGCAGAGATGTAAAAGT+AGG | 0.503787 | 5_2:+8619041 | Msa0754900:intron |
| GACATGGAAGTGTTCTCATT+AGG | 0.509357 | 5_2:+8617966 | Msa0754900:CDS |
| ATGGTTGTGAAAAGTGGAAA+TGG | 0.516210 | 5_2:-8614833 | None:intergenic |
| CATAGTATTGGCTTCTCTGG+TGG | 0.517941 | 5_2:-8616613 | None:intergenic |
| AGCTACCGAACATGACCTTA+AGG | 0.523689 | 5_2:-8618771 | None:intergenic |
| CTCCAGATACTACATTATAG+TGG | 0.528306 | 5_2:-8616801 | None:intergenic |
| TTGATGTATATGTTATAGAT+GGG | 0.528977 | 5_2:-8614908 | None:intergenic |
| TGCTGAGCTACTACTAGTGC+TGG | 0.529471 | 5_2:-8619751 | None:intergenic |
| AATGGAAGAGAAAAGAGCAT+TGG | 0.529613 | 5_2:-8614871 | None:intergenic |
| ATTATTGAAGTTTCTTCCTG+TGG | 0.538673 | 5_2:+8618589 | Msa0754900:CDS |
| TTACAACCAGGGATTCCAAA+AGG | 0.539474 | 5_2:+8616837 | Msa0754900:CDS |
| GAGCACCAAAGTATGAAGTT+GGG | 0.542626 | 5_2:-8619725 | None:intergenic |
| TCGTCGCGAGCTACATAACT+AGG | 0.544739 | 5_2:-8617992 | None:intergenic |
| TTCTGAGACATGGGTAAACA+AGG | 0.546162 | 5_2:+8615201 | Msa0754900:exon |
| GTTTCAGCCCGAGCATGTAA+AGG | 0.551747 | 5_2:-8616688 | None:intergenic |
| GGTTCGCGGTGGAGGACAAA+GGG | 0.557202 | 5_2:+8616646 | Msa0754900:CDS |
| GATACTGCTAAACTTCCTGA+TGG | 0.560155 | 5_2:+8618614 | Msa0754900:CDS |
| TGGGAATTTGTACAATCCAA+TGG | 0.563198 | 5_2:-8614889 | None:intergenic |
| TCCCAGACCACTGACTGAGC+AGG | 0.563264 | 5_2:-8617758 | None:intergenic |
| TGGTTCGCGGTGGAGGACAA+AGG | 0.567138 | 5_2:+8616645 | Msa0754900:CDS |
| TTATGAAAGTGAAGCACCGA+TGG | 0.567218 | 5_2:+8617928 | Msa0754900:CDS |
| TTTACATCTTAAATATATGA+CGG | 0.567772 | 5_2:+8619836 | Msa0754900:three_prime_UTR |
| TTTAGGACCTGCTCAGTCAG+TGG | 0.572891 | 5_2:+8617751 | Msa0754900:intron |
| AGTTTAGCAGTATCAACCAC+AGG | 0.576633 | 5_2:-8618605 | None:intergenic |
| GAAAGCTGCGCACAATTTGG+TGG | 0.579311 | 5_2:+8616916 | Msa0754900:CDS |
| CAGAGATGAAGACAATAATG+AGG | 0.584067 | 5_2:+8619526 | Msa0754900:intron |
| CACTTGTAACTCCACAGTGA+TGG | 0.587666 | 5_2:-8615230 | None:intergenic |
| GAGCTTGCATCAGGAGGCAA+AGG | 0.591960 | 5_2:-8619600 | None:intergenic |
| GATGCAGAGATGTAAAAGTA+GGG | 0.597722 | 5_2:+8619042 | Msa0754900:intron |
| GTCTCTGTCGAGATAGGACA+TGG | 0.606101 | 5_2:+8617950 | Msa0754900:CDS |
| ATACTGCTAAACTTCCTGAT+GGG | 0.607368 | 5_2:+8618615 | Msa0754900:CDS |
| TATGCAATGCATGTGGTTCG+CGG | 0.611941 | 5_2:+8616632 | Msa0754900:CDS |
| CACATTACAAGGTTATACTC+TGG | 0.616204 | 5_2:+8619802 | Msa0754900:three_prime_UTR |
| GTAACTCCACAGTGATGGCA+AGG | 0.624432 | 5_2:-8615225 | None:intergenic |
| AAACAGTAACTAGAATTGAA+GGG | 0.626294 | 5_2:-8614932 | None:intergenic |
| AGATAGCATGAAATGAGAAG+CGG | 0.627497 | 5_2:+8619958 | Msa0754900:three_prime_UTR |
| CTTGCATCTGATTACAACCA+GGG | 0.633133 | 5_2:+8616826 | Msa0754900:CDS |
| CACTATAATGTAGTATCTGG+AGG | 0.635640 | 5_2:+8616802 | Msa0754900:CDS |
| AAGTGTGAGCTTGCATCAGG+AGG | 0.639748 | 5_2:-8619606 | None:intergenic |
| ACTTGCATCTGATTACAACC+AGG | 0.649715 | 5_2:+8616825 | Msa0754900:CDS |
| GTTGTCAAAGTCGAAATGGG+TGG | 0.657876 | 5_2:+8618915 | Msa0754900:CDS |
| ATCCGGCAAAGAGATATCAA+AGG | 0.663680 | 5_2:-8618845 | None:intergenic |
| CCTATCTCGACAGAGACCAT+CGG | 0.673336 | 5_2:-8617944 | None:intergenic |
| CCAATACTATGCAATGCATG+TGG | 0.675078 | 5_2:+8616625 | Msa0754900:CDS |
| GGTGGCCCATTGCGCCAAAG+TGG | 0.675260 | 5_2:-8616595 | None:intergenic |
| GGGTGCAGAAGTTCTGCCTG+CGG | 0.683148 | 5_2:-8619705 | None:intergenic |
| GGTGGAACACTATCATAACA+AGG | 0.694043 | 5_2:+8618933 | Msa0754900:CDS |
| GCAATGCATGTGGTTCGCGG+TGG | 0.695010 | 5_2:+8616635 | Msa0754900:CDS |
| CAAGGACCTTGCCATCACTG+TGG | 0.727560 | 5_2:+8615219 | Msa0754900:CDS |
| TAAACTATGAAGAATTTACG+AGG | 0.736561 | 5_2:+8618540 | Msa0754900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTATAAATATATAT+TGG | - | chr5_2:8615269-8615288 | None:intergenic | 0.0% |
| !! | AATATAAACTAAGAAAAATT+AGG | + | chr5_2:8615343-8615362 | Msa0754900:intron | 10.0% |
| !!! | TGTTGTATAATTTTTTTTAA+AGG | - | chr5_2:8618663-8618682 | None:intergenic | 10.0% |
| !! | AAAAAAAAGGAGAATAAAAA+TGG | - | chr5_2:8615129-8615148 | None:intergenic | 15.0% |
| !!! | ATTTTTATTCTCCTTTTTTT+TGG | + | chr5_2:8615128-8615147 | Msa0754900:five_prime_UTR | 15.0% |
| !!! | ATATTTTTTGACCAAAAAAA+AGG | - | chr5_2:8615142-8615161 | None:intergenic | 15.0% |
| !!! | TAAAATACATACTATTTTGA+AGG | - | chr5_2:8617023-8617042 | None:intergenic | 15.0% |
| !!! | TAAATTTGCTGATATTATTT+TGG | + | chr5_2:8618246-8618265 | Msa0754900:intron | 15.0% |
| !! | ATTTACAATAAAATGTTAGT+AGG | + | chr5_2:8618449-8618468 | Msa0754900:intron | 15.0% |
| !!! | AACATAATTGTTATTATGTT+TGG | + | chr5_2:8618506-8618525 | Msa0754900:intron | 15.0% |
| !! | TTTACATCTTAAATATATGA+CGG | + | chr5_2:8619836-8619855 | Msa0754900:three_prime_UTR | 15.0% |
| !! | AAAAAGATGTCTAAAAAATT+TGG | - | chr5_2:8619990-8620009 | None:intergenic | 15.0% |
| !! | TTGATGTATATGTTATAGAT+GGG | - | chr5_2:8614911-8614930 | None:intergenic | 20.0% |
| !! | ATTGATGTATATGTTATAGA+TGG | - | chr5_2:8614912-8614931 | None:intergenic | 20.0% |
| !!! | AGTTACTGTTTTTGTTTTTT+TGG | + | chr5_2:8614944-8614963 | Msa0754900:five_prime_UTR | 20.0% |
| !!! | TTTTTTTGGTGTTCTTTTTA+AGG | + | chr5_2:8614958-8614977 | Msa0754900:five_prime_UTR | 20.0% |
| !!! | TTTTTAAGGACTAAAAAGAA+AGG | + | chr5_2:8614972-8614991 | Msa0754900:five_prime_UTR | 20.0% |
| !! | GAAGAAAAAAAAACATTTCT+GGG | + | chr5_2:8614994-8615013 | Msa0754900:five_prime_UTR | 20.0% |
| !!! | AAATTTTGCAGAAGAATAAA+GGG | - | chr5_2:8615172-8615191 | None:intergenic | 20.0% |
| !!! | AAAATTTTGCAGAAGAATAA+AGG | - | chr5_2:8615173-8615192 | None:intergenic | 20.0% |
| !! | ATTTATACAGATTCAAAAGT+AGG | + | chr5_2:8615388-8615407 | Msa0754900:intron | 20.0% |
| !!! | TTCATGTATTCTTATTTCAA+TGG | + | chr5_2:8615845-8615864 | Msa0754900:intron | 20.0% |
| !!! | CACAGATTTATAAAACTTTT+TGG | - | chr5_2:8616069-8616088 | None:intergenic | 20.0% |
| !! | AAAAAATGGATAGTGAAATA+AGG | + | chr5_2:8617056-8617075 | Msa0754900:intron | 20.0% |
| !! | AATGAAAAAAAGAATTGAAG+AGG | + | chr5_2:8617419-8617438 | Msa0754900:intron | 20.0% |
| !! | ACAAATCATATATGTAAACA+CGG | - | chr5_2:8617586-8617605 | None:intergenic | 20.0% |
| !! | TTTGTGAAAAAACAAAAGAT+AGG | - | chr5_2:8617700-8617719 | None:intergenic | 20.0% |
| !!! | ATTTATTGTTTGGTTGATTT+AGG | + | chr5_2:8617734-8617753 | Msa0754900:intron | 20.0% |
| !!! | CATATAAGAATCAACTTTTT+TGG | - | chr5_2:8618173-8618192 | None:intergenic | 20.0% |
| !! | TTTAAATCTACTAAACACAA+GGG | - | chr5_2:8618374-8618393 | None:intergenic | 20.0% |
| !! | ATTTAAATCTACTAAACACA+AGG | - | chr5_2:8618375-8618394 | None:intergenic | 20.0% |
| !!! | AATTGTTATTATGTTTGGTT+AGG | + | chr5_2:8618511-8618530 | Msa0754900:intron | 20.0% |
| !! | ATCATTGATGAATAAATCAA+TGG | - | chr5_2:8619307-8619326 | None:intergenic | 20.0% |
| ! | AAACAGTAACTAGAATTGAA+GGG | - | chr5_2:8614935-8614954 | None:intergenic | 25.0% |
| ! | AAAACAGTAACTAGAATTGA+AGG | - | chr5_2:8614936-8614955 | None:intergenic | 25.0% |
| ! | GGAAGAAAAAAAAACATTTC+TGG | + | chr5_2:8614993-8615012 | Msa0754900:five_prime_UTR | 25.0% |
| !! | AAAAACATTTCTGGGTATAT+TGG | + | chr5_2:8615002-8615021 | Msa0754900:five_prime_UTR | 25.0% |
| ! | ATGATGTTGTATTAAGCATT+TGG | + | chr5_2:8615415-8615434 | Msa0754900:intron | 25.0% |
| ! | AACTAACTGGAAAAAGATTA+AGG | + | chr5_2:8615548-8615567 | Msa0754900:intron | 25.0% |
| !!! | ATGGTTTAAATTTTTTGTCG+CGG | + | chr5_2:8615610-8615629 | Msa0754900:intron | 25.0% |
| ! | CTTTATATTACGTTGAAATG+CGG | + | chr5_2:8615652-8615671 | Msa0754900:intron | 25.0% |
| !! | TCTTCACATAGTTTAAAATC+CGG | - | chr5_2:8615771-8615790 | None:intergenic | 25.0% |
| ! | CATTAACATTTAACAGTATC+AGG | - | chr5_2:8615797-8615816 | None:intergenic | 25.0% |
| ! | ATTTCAATGGAAATGAGATA+AGG | + | chr5_2:8615858-8615877 | Msa0754900:intron | 25.0% |
| ! | TTTCAATGGAAATGAGATAA+GGG | + | chr5_2:8615859-8615878 | Msa0754900:intron | 25.0% |
| !!! | ATCCATTTTTGTCTTCTAAA+AGG | + | chr5_2:8615912-8615931 | Msa0754900:intron | 25.0% |
| !!! | ATCCTTTTAGAAGACAAAAA+TGG | - | chr5_2:8615917-8615936 | None:intergenic | 25.0% |
| ! | AAGAGGATATTGATACAAAA+GGG | - | chr5_2:8616356-8616375 | None:intergenic | 25.0% |
| !! | GAATATTGTTTGTTAGAACT+TGG | + | chr5_2:8616506-8616525 | Msa0754900:intron | 25.0% |
| !!! | TGATGATTTTGATGATCAAA+GGG | + | chr5_2:8616711-8616730 | Msa0754900:CDS | 25.0% |
| ! | TTCATAACTGATTAAAGCAT+TGG | + | chr5_2:8616992-8617011 | Msa0754900:intron | 25.0% |
| !! | TCATAACTGATTAAAGCATT+GGG | + | chr5_2:8616993-8617012 | Msa0754900:intron | 25.0% |
| !!! | ACATGTTCATAAGTTGTTTT+CGG | - | chr5_2:8617264-8617283 | None:intergenic | 25.0% |
| ! | TGTTAATTAGGTTTATCTCA+TGG | - | chr5_2:8617340-8617359 | None:intergenic | 25.0% |
| ! | AGCGTATTCAAATGTTAATT+AGG | - | chr5_2:8617352-8617371 | None:intergenic | 25.0% |
| !!! | ATTCTTTTTTTCATTGTCGA+TGG | - | chr5_2:8617414-8617433 | None:intergenic | 25.0% |
| ! | TATATCAACCACATTTATTG+CGG | + | chr5_2:8617476-8617495 | Msa0754900:intron | 25.0% |
| ! | TCATGAAAACATGTTATCTA+AGG | - | chr5_2:8617553-8617572 | None:intergenic | 25.0% |
| !!! | TTATTTTTTTGCGTGTAACT+TGG | + | chr5_2:8618204-8618223 | Msa0754900:intron | 25.0% |
| ! | TAAACTATGAAGAATTTACG+AGG | + | chr5_2:8618540-8618559 | Msa0754900:CDS | 25.0% |
| !! | ATCATACATGAGACTTTTTA+AGG | + | chr5_2:8618692-8618711 | Msa0754900:intron | 25.0% |
| !! | TCATACATGAGACTTTTTAA+GGG | + | chr5_2:8618693-8618712 | Msa0754900:intron | 25.0% |
| ! | TAACAAATCGTAAATCTTGA+TGG | - | chr5_2:8618736-8618755 | None:intergenic | 25.0% |
| ! | TATTAATTGTCCAACTTTGA+AGG | - | chr5_2:8619238-8619257 | None:intergenic | 25.0% |
| ! | ACAATGATTCATTATCTATG+CGG | + | chr5_2:8619269-8619288 | Msa0754900:intron | 25.0% |
| !! | TCTTTGTGATAATTCTTTTG+GGG | - | chr5_2:8619554-8619573 | None:intergenic | 25.0% |
| !! | GTCTTTGTGATAATTCTTTT+GGG | - | chr5_2:8619555-8619574 | None:intergenic | 25.0% |
| !! | AGTCTTTGTGATAATTCTTT+TGG | - | chr5_2:8619556-8619575 | None:intergenic | 25.0% |
| !!! | AGATTCTTTTAACTTTGTTG+AGG | + | chr5_2:8619632-8619651 | Msa0754900:CDS | 25.0% |
| !!! | TGGATGGAATATTTTTGTAT+AGG | + | chr5_2:8619919-8619938 | Msa0754900:three_prime_UTR | 25.0% |
| !!! | TGGAATATTTTTGTATAGGT+TGG | + | chr5_2:8619923-8619942 | Msa0754900:three_prime_UTR | 25.0% |
| TTGGAGAAAAATCTGAGAAA+TGG | - | chr5_2:8614855-8614874 | None:intergenic | 30.0% | |
| TTTGCAACCTATCATATTTC+AGG | + | chr5_2:8615044-8615063 | Msa0754900:five_prime_UTR | 30.0% | |
| TAGCAAACCTGAAATATGAT+AGG | - | chr5_2:8615054-8615073 | None:intergenic | 30.0% | |
| !!! | TTGTTCATTTTTCTGAGACA+TGG | + | chr5_2:8615191-8615210 | Msa0754900:exon | 30.0% |
| !!! | TGTTCATTTTTCTGAGACAT+GGG | + | chr5_2:8615192-8615211 | Msa0754900:exon | 30.0% |
| !! | TTTTTGTTTCACTGTGTTTC+TGG | + | chr5_2:8615484-8615503 | Msa0754900:intron | 30.0% |
| ! | TTAAGGAGAGTTGATTGAAT+TGG | + | chr5_2:8615565-8615584 | Msa0754900:intron | 30.0% |
| ! | TTTGTTGCATTGATAGGAAA+TGG | + | chr5_2:8615591-8615610 | Msa0754900:intron | 30.0% |
| CGCATTTCAACGTAATATAA+AGG | - | chr5_2:8615654-8615673 | None:intergenic | 30.0% | |
| TTCAATGGAAATGAGATAAG+GGG | + | chr5_2:8615860-8615879 | Msa0754900:intron | 30.0% | |
| ! | CTAAAAGGATTTTACGAAGT+TGG | + | chr5_2:8615927-8615946 | Msa0754900:intron | 30.0% |
| TACAATACTGATCACCTTAA+TGG | + | chr5_2:8616107-8616126 | Msa0754900:intron | 30.0% | |
| ATGTTCAATACTCTTAGACT+TGG | + | chr5_2:8616233-8616252 | Msa0754900:intron | 30.0% | |
| CAAGAGGATATTGATACAAA+AGG | - | chr5_2:8616357-8616376 | None:intergenic | 30.0% | |
| TAGTTCAATACTTGATTGTG+AGG | - | chr5_2:8616381-8616400 | None:intergenic | 30.0% | |
| !! | CACAATCAAGTATTGAACTA+TGG | + | chr5_2:8616381-8616400 | Msa0754900:intron | 30.0% |
| ATCATACGTAACTGTTTAAG+TGG | + | chr5_2:8616414-8616433 | Msa0754900:intron | 30.0% | |
| ! | CTTTTATATGCTTTGCGATT+TGG | + | chr5_2:8616467-8616486 | Msa0754900:intron | 30.0% |
| ! | TATTGTTTGTTAGAACTTGG+CGG | + | chr5_2:8616509-8616528 | Msa0754900:intron | 30.0% |
| AACAAAGATGTATCTCAGAT+TGG | - | chr5_2:8616540-8616559 | None:intergenic | 30.0% | |
| !! | CTGATGATTTTGATGATCAA+AGG | + | chr5_2:8616710-8616729 | Msa0754900:CDS | 30.0% |
| AACCACTATAATGTAGTATC+TGG | + | chr5_2:8616799-8616818 | Msa0754900:CDS | 30.0% | |
| ! | TATCTTCATCAAAAGCCTTT+TGG | - | chr5_2:8616855-8616874 | None:intergenic | 30.0% |
| ATGTTAGCACAGTCAAAAAA+TGG | + | chr5_2:8617042-8617061 | Msa0754900:intron | 30.0% | |
| ! | ATATCTGAGTTTTGCTTCTA+GGG | + | chr5_2:8617141-8617160 | Msa0754900:intron | 30.0% |
| TTATATCAGTGTTTGGACTT+TGG | - | chr5_2:8617308-8617327 | None:intergenic | 30.0% | |
| TTGATATAACAAGAGCTTCA+TGG | - | chr5_2:8617464-8617483 | None:intergenic | 30.0% | |
| CATATATGTAAACACGGAAT+TGG | - | chr5_2:8617580-8617599 | None:intergenic | 30.0% | |
| GTAAAGAATTTCTTGATCAG+AGG | - | chr5_2:8617631-8617650 | None:intergenic | 30.0% | |
| TGTAATCTGTACATCAAAAC+TGG | + | chr5_2:8617671-8617690 | Msa0754900:intron | 30.0% | |
| ! | TGTTTTTCTGAATCTTCTGA+TGG | + | chr5_2:8617896-8617915 | Msa0754900:CDS | 30.0% |
| ! | GTTTTTCTGAATCTTCTGAT+GGG | + | chr5_2:8617897-8617916 | Msa0754900:CDS | 30.0% |
| ! | TTTTTCTGAATCTTCTGATG+GGG | + | chr5_2:8617898-8617917 | Msa0754900:CDS | 30.0% |
| AGCTCTCTTTCATTTGATAA+TGG | + | chr5_2:8618028-8618047 | Msa0754900:CDS | 30.0% | |
| TTCTTTCACTAGAATAAACG+TGG | + | chr5_2:8618109-8618128 | Msa0754900:intron | 30.0% | |
| TATTCTCCTAGTTGAATTCT+TGG | + | chr5_2:8618403-8618422 | Msa0754900:intron | 30.0% | |
| ATTATTGAAGTTTCTTCCTG+TGG | + | chr5_2:8618589-8618608 | Msa0754900:CDS | 30.0% | |
| !! | CATACATGAGACTTTTTAAG+GGG | + | chr5_2:8618694-8618713 | Msa0754900:intron | 30.0% |
| TAAAAGTAGGGCTGAAAAAT+CGG | + | chr5_2:8619054-8619073 | Msa0754900:CDS | 30.0% | |
| ! | TTTAAGATTTAACGCTAACC+TGG | - | chr5_2:8619160-8619179 | None:intergenic | 30.0% |
| TATCATAAGACCTTCCAATT+AGG | + | chr5_2:8619204-8619223 | Msa0754900:intron | 30.0% | |
| TACTCCTTATGATTTAACTG+AGG | + | chr5_2:8619412-8619431 | Msa0754900:intron | 30.0% | |
| GATTCCTCAGTTAAATCATA+AGG | - | chr5_2:8619419-8619438 | None:intergenic | 30.0% | |
| TACTCCTTATGATTTAACTG+AGG | + | chr5_2:8619412-8619431 | Msa0754900:intron | 30.0% | |
| GATTCCTCAGTTAAATCATA+AGG | - | chr5_2:8619419-8619438 | None:intergenic | 30.0% | |
| TGCGGAAAAGAATTATTAGA+AGG | - | chr5_2:8619690-8619709 | None:intergenic | 30.0% | |
| ! | TTCTAATAATTCTTTTCCGC+AGG | + | chr5_2:8619689-8619708 | Msa0754900:CDS | 30.0% |
| !! | CCTTGTAATGTGTTACTTAA+TGG | - | chr5_2:8619794-8619813 | None:intergenic | 30.0% |
| CCATTAAGTAACACATTACA+AGG | + | chr5_2:8619791-8619810 | Msa0754900:exon | 30.0% | |
| CAAAAAGAAGGTTGCAAATA+AGG | - | chr5_2:8619872-8619891 | None:intergenic | 30.0% | |
| ! | CTTATTTGCAACCTTCTTTT+TGG | + | chr5_2:8619870-8619889 | Msa0754900:three_prime_UTR | 30.0% |
| ! | GATTGTCAAGGATTTGAAAT+TGG | + | chr5_2:8619899-8619918 | Msa0754900:three_prime_UTR | 30.0% |
| ATGGTTGTGAAAAGTGGAAA+TGG | - | chr5_2:8614836-8614855 | None:intergenic | 35.0% | |
| TGAGAAATGGTTGTGAAAAG+TGG | - | chr5_2:8614842-8614861 | None:intergenic | 35.0% | |
| ! | AATGGAAGAGAAAAGAGCAT+TGG | - | chr5_2:8614874-8614893 | None:intergenic | 35.0% |
| ! | AATGCTCTTTTCTCTTCCAT+TGG | + | chr5_2:8614873-8614892 | Msa0754900:five_prime_UTR | 35.0% |
| TGGGAATTTGTACAATCCAA+TGG | - | chr5_2:8614892-8614911 | None:intergenic | 35.0% | |
| GCATGTTCTGTGTAATACTA+TGG | + | chr5_2:8615365-8615384 | Msa0754900:intron | 35.0% | |
| ! | GCATTTGGAATTGAAAGTTG+TGG | + | chr5_2:8615430-8615449 | Msa0754900:intron | 35.0% |
| ! | TCTGAGACAATGTAACTAAC+TGG | + | chr5_2:8615535-8615554 | Msa0754900:intron | 35.0% |
| !! | TGGTGATTTGTTGCATTGAT+AGG | + | chr5_2:8615585-8615604 | Msa0754900:intron | 35.0% |
| GAAATGAGATAAGGGGATTA+TGG | + | chr5_2:8615867-8615886 | Msa0754900:intron | 35.0% | |
| ACAATTTCTCAATGTGTCAG+AGG | + | chr5_2:8615970-8615989 | Msa0754900:intron | 35.0% | |
| TTTCATTAGCCAGAAAGCAA+TGG | - | chr5_2:8616039-8616058 | None:intergenic | 35.0% | |
| TAGCAGAAGTAGTTCCATTA+AGG | - | chr5_2:8616124-8616143 | None:intergenic | 35.0% | |
| !! | TGTTTAAGTGGTTTGTTGTG+CGG | + | chr5_2:8616426-8616445 | Msa0754900:intron | 35.0% |
| ! | TGCTTTGCGATTTGGATTAT+CGG | + | chr5_2:8616475-8616494 | Msa0754900:intron | 35.0% |
| ATTACACACCTTTACATGCT+CGG | + | chr5_2:8616680-8616699 | Msa0754900:CDS | 35.0% | |
| ! | AAGAAGTGAACTTGCTCAAA+CGG | + | chr5_2:8616770-8616789 | Msa0754900:CDS | 35.0% |
| CTCCAGATACTACATTATAG+TGG | - | chr5_2:8616804-8616823 | None:intergenic | 35.0% | |
| CACTATAATGTAGTATCTGG+AGG | + | chr5_2:8616802-8616821 | Msa0754900:CDS | 35.0% | |
| ATGAGTAATCGATCAAGTTC+AGG | + | chr5_2:8616874-8616893 | Msa0754900:CDS | 35.0% | |
| ! | CAGGTTTGTTCTGATTTCAT+TGG | + | chr5_2:8616959-8616978 | Msa0754900:intron | 35.0% |
| ! | AAGAAATTGTGCTGCTATTC+AGG | - | chr5_2:8617097-8617116 | None:intergenic | 35.0% |
| ! | GATATCTGAGTTTTGCTTCT+AGG | + | chr5_2:8617140-8617159 | Msa0754900:intron | 35.0% |
| CAAGCACTTATATCAGTGTT+TGG | - | chr5_2:8617315-8617334 | None:intergenic | 35.0% | |
| AGAACTTTCCGCAATAAATG+TGG | - | chr5_2:8617487-8617506 | None:intergenic | 35.0% | |
| !!! | ACACATGTCCTCTTTTTTGA+AGG | - | chr5_2:8617800-8617819 | None:intergenic | 35.0% |
| TCAAAAAAGAGGACATGTGT+TGG | + | chr5_2:8617800-8617819 | Msa0754900:CDS | 35.0% | |
| AAGAATATGCGTCACTCATT+GGG | - | chr5_2:8618060-8618079 | None:intergenic | 35.0% | |
| TAAGAATATGCGTCACTCAT+TGG | - | chr5_2:8618061-8618080 | None:intergenic | 35.0% | |
| AGTGACGCATATTCTTATTC+TGG | + | chr5_2:8618064-8618083 | Msa0754900:CDS | 35.0% | |
| !! | GAAAGCTTGCCTTTTAAGAA+CGG | - | chr5_2:8618092-8618111 | None:intergenic | 35.0% |
| ATACTGCTAAACTTCCTGAT+GGG | + | chr5_2:8618615-8618634 | Msa0754900:CDS | 35.0% | |
| ATGAGTTGTCAAAGTCGAAA+TGG | + | chr5_2:8618911-8618930 | Msa0754900:CDS | 35.0% | |
| TGAGTTGTCAAAGTCGAAAT+GGG | + | chr5_2:8618912-8618931 | Msa0754900:CDS | 35.0% | |
| !! | CTACTTTTACATCTCTGCAT+CGG | - | chr5_2:8619043-8619062 | None:intergenic | 35.0% |
| GATGCAGAGATGTAAAAGTA+GGG | + | chr5_2:8619042-8619061 | Msa0754900:intron | 35.0% | |
| TCTCTTCACATTTGCAACAT+TGG | - | chr5_2:8619110-8619129 | None:intergenic | 35.0% | |
| TGAAGGAGTCATATCCTAAT+TGG | - | chr5_2:8619221-8619240 | None:intergenic | 35.0% | |
| CAGAGATGAAGACAATAATG+AGG | + | chr5_2:8619526-8619545 | Msa0754900:intron | 35.0% | |
| CACATTACAAGGTTATACTC+TGG | + | chr5_2:8619802-8619821 | Msa0754900:three_prime_UTR | 35.0% | |
| ! | GTCAAGGATTTGAAATTGGA+TGG | + | chr5_2:8619903-8619922 | Msa0754900:three_prime_UTR | 35.0% |
| AGATAGCATGAAATGAGAAG+CGG | + | chr5_2:8619958-8619977 | Msa0754900:three_prime_UTR | 35.0% | |
| !! | TTCTGAGACATGGGTAAACA+AGG | + | chr5_2:8615201-8615220 | Msa0754900:exon | 40.0% |
| AACCGCAATTATGACAGCAT+CGG | - | chr5_2:8615688-8615707 | None:intergenic | 40.0% | |
| CAACTGCGAACGCAATATAA+CGG | - | chr5_2:8615738-8615757 | None:intergenic | 40.0% | |
| TTATATTGCGTTCGCAGTTG+CGG | + | chr5_2:8615738-8615757 | Msa0754900:intron | 40.0% | |
| ATGGAGCAAGACATGATTGA+GGG | - | chr5_2:8616020-8616039 | None:intergenic | 40.0% | |
| AATGGAGCAAGACATGATTG+AGG | - | chr5_2:8616021-8616040 | None:intergenic | 40.0% | |
| ! | GCAATCAATCTTTTCACCAC+AGG | + | chr5_2:8616285-8616304 | Msa0754900:intron | 40.0% |
| CTAAGAACATCTGTATCCTG+TGG | - | chr5_2:8616304-8616323 | None:intergenic | 40.0% | |
| TACTTGATTGTGAGGACAAG+AGG | - | chr5_2:8616373-8616392 | None:intergenic | 40.0% | |
| ! | TGACAATTGAGCATTGCAAC+AGG | + | chr5_2:8616568-8616587 | Msa0754900:intron | 40.0% |
| !! | TTGCATAGTATTGGCTTCTC+TGG | - | chr5_2:8616619-8616638 | None:intergenic | 40.0% |
| CCACATGCATTGCATAGTAT+TGG | - | chr5_2:8616628-8616647 | None:intergenic | 40.0% | |
| CCAATACTATGCAATGCATG+TGG | + | chr5_2:8616625-8616644 | Msa0754900:CDS | 40.0% | |
| TTACACACCTTTACATGCTC+GGG | + | chr5_2:8616681-8616700 | Msa0754900:CDS | 40.0% | |
| ! | TTGATGATCAAAGGGCTTCA+AGG | + | chr5_2:8616719-8616738 | Msa0754900:CDS | 40.0% |
| ACTTGCATCTGATTACAACC+AGG | + | chr5_2:8616825-8616844 | Msa0754900:CDS | 40.0% | |
| CTTGCATCTGATTACAACCA+GGG | + | chr5_2:8616826-8616845 | Msa0754900:CDS | 40.0% | |
| TTACAACCAGGGATTCCAAA+AGG | + | chr5_2:8616837-8616856 | Msa0754900:CDS | 40.0% | |
| ACAGATGCTAGTGATCTAAC+AGG | + | chr5_2:8616940-8616959 | Msa0754900:CDS | 40.0% | |
| AGTGCTCATTCGCTATTCTA+AGG | + | chr5_2:8617189-8617208 | Msa0754900:intron | 40.0% | |
| !!! | CTCTTTTTTGAAGGCACTGT+GGG | - | chr5_2:8617791-8617810 | None:intergenic | 40.0% |
| !! | TTATGAAAGTGAAGCACCGA+TGG | + | chr5_2:8617928-8617947 | Msa0754900:CDS | 40.0% |
| !! | GACATGGAAGTGTTCTCATT+AGG | + | chr5_2:8617966-8617985 | Msa0754900:CDS | 40.0% |
| ! | CTGGAAAGAGTACAAATCCT+TGG | + | chr5_2:8618335-8618354 | Msa0754900:intron | 40.0% |
| AGGGTGAATCATGATTTCCA+AGG | - | chr5_2:8618355-8618374 | None:intergenic | 40.0% | |
| CAACTGCCAAGAATTCAACT+AGG | - | chr5_2:8618412-8618431 | None:intergenic | 40.0% | |
| CTAGTTGAATTCTTGGCAGT+TGG | + | chr5_2:8618410-8618429 | Msa0754900:intron | 40.0% | |
| AGTTTAGCAGTATCAACCAC+AGG | - | chr5_2:8618608-8618627 | None:intergenic | 40.0% | |
| GATACTGCTAAACTTCCTGA+TGG | + | chr5_2:8618614-8618633 | Msa0754900:CDS | 40.0% | |
| GAGTAGAATTCTAACCCATC+AGG | - | chr5_2:8618632-8618651 | None:intergenic | 40.0% | |
| !! | TTGTTGTTTGTGCAGCCTTA+AGG | + | chr5_2:8618756-8618775 | Msa0754900:intron | 40.0% |
| TTTCAGCAGCTTCTTGCAAA+AGG | + | chr5_2:8618820-8618839 | Msa0754900:CDS | 40.0% | |
| ATCCGGCAAAGAGATATCAA+AGG | - | chr5_2:8618848-8618867 | None:intergenic | 40.0% | |
| !! | CAGTCTTCAGGTTTTACATC+CGG | - | chr5_2:8618865-8618884 | None:intergenic | 40.0% |
| GGTGGAACACTATCATAACA+AGG | + | chr5_2:8618933-8618952 | Msa0754900:CDS | 40.0% | |
| CGATGCAGAGATGTAAAAGT+AGG | + | chr5_2:8619041-8619060 | Msa0754900:intron | 40.0% | |
| AGCAGAAATCAGAACTTTCC+AGG | + | chr5_2:8619139-8619158 | Msa0754900:CDS | 40.0% | |
| GGAGTCATATCCTAATTGGA+AGG | - | chr5_2:8619217-8619236 | None:intergenic | 40.0% | |
| GGATATGACTCCTTCAAAGT+TGG | + | chr5_2:8619225-8619244 | Msa0754900:intron | 40.0% | |
| ! | GGCAAAGGAAATAGGCTTTT+TGG | - | chr5_2:8619588-8619607 | None:intergenic | 40.0% |
| GAGCACCAAAGTATGAAGTT+GGG | - | chr5_2:8619728-8619747 | None:intergenic | 40.0% | |
| TGAGCACCAAAGTATGAAGT+TGG | - | chr5_2:8619729-8619748 | None:intergenic | 40.0% | |
| CAATCCAAGCTCCAAAAAGA+AGG | - | chr5_2:8619884-8619903 | None:intergenic | 40.0% | |
| !!! | TTTTGGAGCTTGGATTGTCA+AGG | + | chr5_2:8619887-8619906 | Msa0754900:three_prime_UTR | 40.0% |
| CACTTGTAACTCCACAGTGA+TGG | - | chr5_2:8615233-8615252 | None:intergenic | 45.0% | |
| AGCCGATGCTGTCATAATTG+CGG | + | chr5_2:8615683-8615702 | Msa0754900:intron | 45.0% | |
| ! | TTGCGGTTGTGATGATGCTA+TGG | + | chr5_2:8615700-8615719 | Msa0754900:intron | 45.0% |
| CTCAATGTGTCAGAGGATCT+TGG | + | chr5_2:8615977-8615996 | Msa0754900:intron | 45.0% | |
| TGTCTTGCTCCATTGCTTTC+TGG | + | chr5_2:8616027-8616046 | Msa0754900:intron | 45.0% | |
| !! | CATAGTATTGGCTTCTCTGG+TGG | - | chr5_2:8616616-8616635 | None:intergenic | 45.0% |
| TATGCAATGCATGTGGTTCG+CGG | + | chr5_2:8616632-8616651 | Msa0754900:CDS | 45.0% | |
| !!! | CAAAAGCCTTTTGGAATCCC+TGG | - | chr5_2:8616846-8616865 | None:intergenic | 45.0% |
| ACCAAATTGTGCGCAGCTTT+CGG | - | chr5_2:8616917-8616936 | None:intergenic | 45.0% | |
| GATCCCATGCGTGATTACAT+GGG | - | chr5_2:8617385-8617404 | None:intergenic | 45.0% | |
| AGATCCCATGCGTGATTACA+TGG | - | chr5_2:8617386-8617405 | None:intergenic | 45.0% | |
| !!! | CCTCTTTTTTGAAGGCACTG+TGG | - | chr5_2:8617792-8617811 | None:intergenic | 45.0% |
| CCACAGTGCCTTCAAAAAAG+AGG | + | chr5_2:8617789-8617808 | Msa0754900:CDS | 45.0% | |
| GTGAGCTTCTCAACAGAAGA+TGG | - | chr5_2:8617839-8617858 | None:intergenic | 45.0% | |
| ATTCTGGCGCCGTTCTTAAA+AGG | + | chr5_2:8618080-8618099 | Msa0754900:intron | 45.0% | |
| AGAAGAGACAAAGTGCGATG+CGG | + | chr5_2:8618269-8618288 | Msa0754900:intron | 45.0% | |
| TTTCAGTGACAAGTCTCAGC+TGG | + | chr5_2:8618316-8618335 | Msa0754900:intron | 45.0% | |
| TGCAGCCTTAAGGTCATGTT+CGG | + | chr5_2:8618766-8618785 | Msa0754900:intron | 45.0% | |
| AGCTACCGAACATGACCTTA+AGG | - | chr5_2:8618774-8618793 | None:intergenic | 45.0% | |
| GTTCGGTAGCTCTCAATTCA+AGG | + | chr5_2:8618783-8618802 | Msa0754900:CDS | 45.0% | |
| CGCCTTTGATATCTCTTTGC+CGG | + | chr5_2:8618843-8618862 | Msa0754900:CDS | 45.0% | |
| TTCAAAGTCTCGCAGTCTTC+AGG | - | chr5_2:8618877-8618896 | None:intergenic | 45.0% | |
| GTTGTCAAAGTCGAAATGGG+TGG | + | chr5_2:8618915-8618934 | Msa0754900:CDS | 45.0% | |
| ! | ACATCTCTGCATCGGTAGAA+GGG | - | chr5_2:8619035-8619054 | None:intergenic | 45.0% |
| ! | TACATCTCTGCATCGGTAGA+AGG | - | chr5_2:8619036-8619055 | None:intergenic | 45.0% |
| GCTGAAAAATCGGATGTTCC+AGG | + | chr5_2:8619064-8619083 | Msa0754900:CDS | 45.0% | |
| CATCAGGAGGCAAAGGAAAT+AGG | - | chr5_2:8619596-8619615 | None:intergenic | 45.0% | |
| CTGCACCCAACTTCATACTT+TGG | + | chr5_2:8619720-8619739 | Msa0754900:CDS | 45.0% | |
| !!! | GCAACCTTCTTTTTGGAGCT+TGG | + | chr5_2:8619877-8619896 | Msa0754900:three_prime_UTR | 45.0% |
| !! | ATTACAATAATTAATTAAAA+TGG | - | chr5_2:8615089-8615108 | None:intergenic | 5.0% |
| !!! | TTTAATTTTAATTTATTGTT+TGG | + | chr5_2:8617724-8617743 | Msa0754900:intron | 5.0% |
| GTAACTCCACAGTGATGGCA+AGG | - | chr5_2:8615228-8615247 | None:intergenic | 50.0% | |
| TTGCAACAGGCACACCACTT+TGG | + | chr5_2:8616581-8616600 | Msa0754900:intron | 50.0% | |
| GTTTCAGCCCGAGCATGTAA+AGG | - | chr5_2:8616691-8616710 | None:intergenic | 50.0% | |
| TCCGAAAGCTGCGCACAATT+TGG | + | chr5_2:8616913-8616932 | Msa0754900:CDS | 50.0% | |
| GAAAGCTGCGCACAATTTGG+TGG | + | chr5_2:8616916-8616935 | Msa0754900:CDS | 50.0% | |
| TGCGTGATTACATGGGCGTT+TGG | - | chr5_2:8617378-8617397 | None:intergenic | 50.0% | |
| AACGCCCATGTAATCACGCA+TGG | + | chr5_2:8617378-8617397 | Msa0754900:intron | 50.0% | |
| ACGCCCATGTAATCACGCAT+GGG | + | chr5_2:8617379-8617398 | Msa0754900:intron | 50.0% | |
| ! | TTTAGGACCTGCTCAGTCAG+TGG | + | chr5_2:8617751-8617770 | Msa0754900:intron | 50.0% |
| !!! | TTTTGAAGGCACTGTGGGAG+TGG | - | chr5_2:8617786-8617805 | None:intergenic | 50.0% |
| CCTATCTCGACAGAGACCAT+CGG | - | chr5_2:8617947-8617966 | None:intergenic | 50.0% | |
| GTCTCTGTCGAGATAGGACA+TGG | + | chr5_2:8617950-8617969 | Msa0754900:CDS | 50.0% | |
| TCGTCGCGAGCTACATAACT+AGG | - | chr5_2:8617995-8618014 | None:intergenic | 50.0% | |
| GATGCTATACCAGCAGATCC+TGG | - | chr5_2:8619085-8619104 | None:intergenic | 50.0% | |
| AAGTGTGAGCTTGCATCAGG+AGG | - | chr5_2:8619609-8619628 | None:intergenic | 50.0% | |
| AGCAAGTGTGAGCTTGCATC+AGG | - | chr5_2:8619612-8619631 | None:intergenic | 50.0% | |
| TGCTGAGCTACTACTAGTGC+TGG | - | chr5_2:8619754-8619773 | None:intergenic | 50.0% | |
| CAAGGACCTTGCCATCACTG+TGG | + | chr5_2:8615219-8615238 | Msa0754900:CDS | 55.0% | |
| GCACACCACTTTGGCGCAAT+GGG | + | chr5_2:8616590-8616609 | Msa0754900:CDS | 55.0% | |
| ACCTGCTCAGTCAGTGGTCT+GGG | + | chr5_2:8617757-8617776 | Msa0754900:CDS | 55.0% | |
| CCGATGGTCTCTGTCGAGAT+AGG | + | chr5_2:8617944-8617963 | Msa0754900:CDS | 55.0% | |
| TCGGATGTTCCAGGATCTGC+TGG | + | chr5_2:8619073-8619092 | Msa0754900:CDS | 55.0% | |
| GAGCTTGCATCAGGAGGCAA+AGG | - | chr5_2:8619603-8619622 | None:intergenic | 55.0% | |
| TGCGTTCGCAGTTGCGGTTG+TGG | + | chr5_2:8615744-8615763 | Msa0754900:intron | 60.0% | |
| TCGCAGTTGCGGTTGTGGAC+CGG | + | chr5_2:8615749-8615768 | Msa0754900:intron | 60.0% | |
| GGCACACCACTTTGGCGCAA+TGG | + | chr5_2:8616589-8616608 | Msa0754900:intron | 60.0% | |
| GCAATGCATGTGGTTCGCGG+TGG | + | chr5_2:8616635-8616654 | Msa0754900:CDS | 60.0% | |
| ATGCATGTGGTTCGCGGTGG+AGG | + | chr5_2:8616638-8616657 | Msa0754900:CDS | 60.0% | |
| TGGTTCGCGGTGGAGGACAA+AGG | + | chr5_2:8616645-8616664 | Msa0754900:CDS | 60.0% | |
| GGTTCGCGGTGGAGGACAAA+GGG | + | chr5_2:8616646-8616665 | Msa0754900:CDS | 60.0% | |
| GACCTGCTCAGTCAGTGGTC+TGG | + | chr5_2:8617756-8617775 | Msa0754900:CDS | 60.0% | |
| ! | TCCCAGACCACTGACTGAGC+AGG | - | chr5_2:8617761-8617780 | None:intergenic | 60.0% |
| AGCTCGCGACGAAGAGTCTG+AGG | + | chr5_2:8618003-8618022 | Msa0754900:CDS | 60.0% | |
| GGGTGCAGAAGTTCTGCCTG+CGG | - | chr5_2:8619708-8619727 | None:intergenic | 60.0% | |
| GGTGGCCCATTGCGCCAAAG+TGG | - | chr5_2:8616598-8616617 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 8614788 | 8620012 | 8614788 | ID=Msa0754900;Name=Msa0754900 |
| chr5_2 | mRNA | 8614788 | 8620012 | 8614788 | ID=Msa0754900-mRNA-1;Parent=Msa0754900;Name=Msa0754900-mRNA-1;_AED=0.06;_eAED=0.06;_QI=422|0.83|0.85|1|1|1|7|215|471 |
| chr5_2 | exon | 8614788 | 8615249 | 8614788 | ID=Msa0754900-mRNA-1:exon:3918;Parent=Msa0754900-mRNA-1 |
| chr5_2 | exon | 8616590 | 8616961 | 8616590 | ID=Msa0754900-mRNA-1:exon:3919;Parent=Msa0754900-mRNA-1 |
| chr5_2 | exon | 8617756 | 8618090 | 8617756 | ID=Msa0754900-mRNA-1:exon:3920;Parent=Msa0754900-mRNA-1 |
| chr5_2 | exon | 8618533 | 8618636 | 8618533 | ID=Msa0754900-mRNA-1:exon:3921;Parent=Msa0754900-mRNA-1 |
| chr5_2 | exon | 8618771 | 8618954 | 8618771 | ID=Msa0754900-mRNA-1:exon:3922;Parent=Msa0754900-mRNA-1 |
| chr5_2 | exon | 8619049 | 8619160 | 8619049 | ID=Msa0754900-mRNA-1:exon:3923;Parent=Msa0754900-mRNA-1 |
| chr5_2 | exon | 8619529 | 8620012 | 8619529 | ID=Msa0754900-mRNA-1:exon:3924;Parent=Msa0754900-mRNA-1 |
| chr5_2 | five_prime_UTR | 8614788 | 8615209 | 8614788 | ID=Msa0754900-mRNA-1:five_prime_utr;Parent=Msa0754900-mRNA-1 |
| chr5_2 | CDS | 8615210 | 8615249 | 8615210 | ID=Msa0754900-mRNA-1:cds;Parent=Msa0754900-mRNA-1 |
| chr5_2 | CDS | 8616590 | 8616961 | 8616590 | ID=Msa0754900-mRNA-1:cds;Parent=Msa0754900-mRNA-1 |
| chr5_2 | CDS | 8617756 | 8618090 | 8617756 | ID=Msa0754900-mRNA-1:cds;Parent=Msa0754900-mRNA-1 |
| chr5_2 | CDS | 8618533 | 8618636 | 8618533 | ID=Msa0754900-mRNA-1:cds;Parent=Msa0754900-mRNA-1 |
| chr5_2 | CDS | 8618771 | 8618954 | 8618771 | ID=Msa0754900-mRNA-1:cds;Parent=Msa0754900-mRNA-1 |
| chr5_2 | CDS | 8619049 | 8619160 | 8619049 | ID=Msa0754900-mRNA-1:cds;Parent=Msa0754900-mRNA-1 |
| chr5_2 | CDS | 8619529 | 8619797 | 8619529 | ID=Msa0754900-mRNA-1:cds;Parent=Msa0754900-mRNA-1 |
| chr5_2 | three_prime_UTR | 8619798 | 8620012 | 8619798 | ID=Msa0754900-mRNA-1:three_prime_utr;Parent=Msa0754900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
