Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0755730 | sp|Q9C8Z4|HEAT1_ARATH | 49.020 | 663 | 315 | 9 | 1 | 645 | 1 | 658 | 0.0 | 583 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0755730 | A0A396HWR9 | 86.381 | 793 | 70 | 6 | 1 | 755 | 1 | 793 | 0.0 | 1298 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0755730 | Msa1454990 | 0.805314 | 1.417299e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0755730 | MtrunA17_Chr5g0443891 | 86.381 | 793 | 70 | 6 | 1 | 755 | 1 | 793 | 0.0 | 1298 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0755730 | AT3G06530.1 | 49.020 | 663 | 315 | 9 | 1 | 645 | 1 | 658 | 0.0 | 583 |
Msa0755730 | AT3G06530.5 | 49.020 | 663 | 315 | 9 | 1 | 645 | 1 | 658 | 0.0 | 583 |
Msa0755730 | AT3G06530.4 | 48.722 | 665 | 316 | 10 | 1 | 645 | 1 | 660 | 0.0 | 579 |
Msa0755730 | AT3G06530.2 | 48.722 | 665 | 316 | 10 | 1 | 645 | 1 | 660 | 0.0 | 579 |
Msa0755730 | AT3G06530.3 | 48.722 | 665 | 316 | 10 | 1 | 645 | 1 | 660 | 0.0 | 579 |
Find 151 sgRNAs with CRISPR-Local
Find 495 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTATCACCTGCAGATAATT+AGG | 0.158360 | 5_2:-9571157 | None:intergenic |
AAGTTATGGTTTGCATATTT+TGG | 0.181805 | 5_2:+9576328 | Msa0755730:CDS |
TGCTGTTGTTGTTGAAGTTT+TGG | 0.205063 | 5_2:+9569477 | Msa0755730:CDS |
AATCCTTCAAAGAATGTAAT+TGG | 0.216676 | 5_2:+9569445 | Msa0755730:CDS |
TAAGATGTTGGATGGGAATT+TGG | 0.221917 | 5_2:+9571919 | Msa0755730:CDS |
TTGGAAGTGTGTCCACATTT+TGG | 0.224042 | 5_2:-9570923 | None:intergenic |
TTCTGTTAAGGAATGGTATA+TGG | 0.224760 | 5_2:+9569212 | Msa0755730:intron |
CTTTACGGTTATCTGTAAAT+TGG | 0.249413 | 5_2:+9575664 | Msa0755730:CDS |
CCGTACTTGAGATTAATTTC+TGG | 0.260119 | 5_2:+9568874 | Msa0755730:CDS |
AGGAGGCTAAAGATCTTTAT+TGG | 0.270767 | 5_2:+9570724 | Msa0755730:CDS |
GTTACCTTCAATTAACTTTA+CGG | 0.271083 | 5_2:+9575649 | Msa0755730:CDS |
ATGATGAACAGAGTCATTTA+TGG | 0.277685 | 5_2:-9571313 | None:intergenic |
CAAGATTGATTAAGGCAATA+AGG | 0.280374 | 5_2:-9570758 | None:intergenic |
TATAATCATTCGCAGTTCTA+AGG | 0.285402 | 5_2:+9571245 | Msa0755730:intron |
CTCTTATCAGCGGCTTCTTT+AGG | 0.291025 | 5_2:-9568566 | None:intergenic |
CTAAAGATCTTTATTGGTTT+CGG | 0.298719 | 5_2:+9570730 | Msa0755730:CDS |
GATGTTTCGCAGTAGGGTTT+AGG | 0.300439 | 5_2:-9568310 | None:intergenic |
CGTGTTCTTCTTCTTCGTTT+TGG | 0.305162 | 5_2:-9568380 | None:intergenic |
GAACGAAGAATTGAGAAGTT+AGG | 0.308727 | 5_2:-9568421 | None:intergenic |
ATGTTTCGCAGTAGGGTTTA+GGG | 0.312685 | 5_2:-9568309 | None:intergenic |
TTGAGCAGCAATGGTGTAAA+TGG | 0.313577 | 5_2:-9568597 | None:intergenic |
TGGTATATGGGAGTTTCTTA+AGG | 0.315680 | 5_2:+9569225 | Msa0755730:CDS |
CAAGCAGCTTTAAATGTTGA+TGG | 0.324998 | 5_2:+9573084 | Msa0755730:CDS |
CTGCTTGATATAAATTCTTC+GGG | 0.357022 | 5_2:+9572145 | Msa0755730:CDS |
TTAGCACTGATGAACGGTTT+AGG | 0.363947 | 5_2:+9568755 | Msa0755730:CDS |
ATATCTCGAAGTCAAAAGTT+TGG | 0.366769 | 5_2:+9571954 | Msa0755730:CDS |
TGCTGCACTATAACCATTCT+AGG | 0.367211 | 5_2:-9569274 | None:intergenic |
TACCTGGACAAGATTGATTA+AGG | 0.369079 | 5_2:-9570766 | None:intergenic |
TAAATTGGCTCGCAATTTCA+TGG | 0.369221 | 5_2:+9575679 | Msa0755730:CDS |
CACACAAGTTGATAGGATCT+TGG | 0.372295 | 5_2:-9571343 | None:intergenic |
ATCATCAAACTGTCTCAATA+TGG | 0.372395 | 5_2:-9573043 | None:intergenic |
ACTGCTTGATATAAATTCTT+CGG | 0.376474 | 5_2:+9572144 | Msa0755730:CDS |
CAGTCCCCAGAGTAAAGAAT+TGG | 0.381140 | 5_2:+9568798 | Msa0755730:CDS |
TTGATGATAGTTTGCTTGCT+TGG | 0.385008 | 5_2:+9570627 | Msa0755730:CDS |
ACCTCAAAATGCAAAAGTTA+TGG | 0.385817 | 5_2:+9576314 | Msa0755730:CDS |
TTAGGATCGAACAAGATAGA+AGG | 0.387204 | 5_2:-9568548 | None:intergenic |
GAGAGTGAACGACGTCGTTT+CGG | 0.387540 | 5_2:+9568265 | None:intergenic |
TCTGAAAGATACTTCTTATC+AGG | 0.389337 | 5_2:-9569562 | None:intergenic |
AGAATTGAGAAGTTAGGGTT+GGG | 0.392048 | 5_2:-9568415 | None:intergenic |
GGTTTGATACGTTCAGTTGC+CGG | 0.395567 | 5_2:+9570684 | Msa0755730:CDS |
CTCTATCCAATTCTTTACTC+TGG | 0.397972 | 5_2:-9568804 | None:intergenic |
TACTAGTCAAAGAAATTAAC+TGG | 0.400542 | 5_2:+9574440 | Msa0755730:CDS |
AAGCCAATTACATTCTTTGA+AGG | 0.402673 | 5_2:-9569448 | None:intergenic |
CTGATCACAGAAGTATGATA+TGG | 0.405618 | 5_2:-9574188 | None:intergenic |
AGCCTGAATATAATGTTGAT+TGG | 0.409909 | 5_2:+9575704 | Msa0755730:CDS |
ATAGTTTCACACAAGTTGAT+AGG | 0.411967 | 5_2:-9571350 | None:intergenic |
TCGAAGTCAAAAGTTTGGTT+TGG | 0.414254 | 5_2:+9571959 | Msa0755730:CDS |
GCAGGATGATAGCAAGATAA+AGG | 0.416003 | 5_2:+9576751 | Msa0755730:intron |
AAGATAGAAGGGCGAGTAAA+CGG | 0.417430 | 5_2:-9568536 | None:intergenic |
AGCTTTAAATGTTGATGGCT+TGG | 0.420896 | 5_2:+9573089 | Msa0755730:CDS |
TGGCTGTGCTTCAGGATTGG+AGG | 0.422251 | 5_2:+9568726 | Msa0755730:intron |
AAAGTTTCTCGTTGTTCTGT+TGG | 0.425961 | 5_2:+9571130 | Msa0755730:CDS |
TTATCACCTGCAGATAATTA+GGG | 0.429558 | 5_2:-9571156 | None:intergenic |
TGATGAACAGAGTCATTTAT+GGG | 0.430170 | 5_2:-9571312 | None:intergenic |
GGTTGAAGAGAGGCAGAGGT+AGG | 0.431356 | 5_2:-9568346 | None:intergenic |
AACCAATCAACATTATATTC+AGG | 0.433063 | 5_2:-9575706 | None:intergenic |
AACGAAGAATTGAGAAGTTA+GGG | 0.434668 | 5_2:-9568420 | None:intergenic |
AACGACGTCGTTTCGGTTGG+CGG | 0.440047 | 5_2:+9568272 | Msa0755730:five_prime_UTR |
AAGATTGATTAAGGCAATAA+GGG | 0.442710 | 5_2:-9570757 | None:intergenic |
GGTATATGGGAGTTTCTTAA+GGG | 0.443756 | 5_2:+9569226 | Msa0755730:CDS |
TCGAATGTCAATTAGCTGGC+TGG | 0.446269 | 5_2:+9571680 | Msa0755730:intron |
CTCACAAGCACGAGCAATCC+CGG | 0.449224 | 5_2:-9570703 | None:intergenic |
GCCTCAACATCTTCGATGTC+AGG | 0.454083 | 5_2:+9571387 | Msa0755730:CDS |
TCTATCCAATTCTTTACTCT+GGG | 0.461382 | 5_2:-9568803 | None:intergenic |
GCAAACTATCATCAATGAAC+TGG | 0.461619 | 5_2:-9570619 | None:intergenic |
AAGAGGTTGAAGAGAGGCAG+AGG | 0.466037 | 5_2:-9568350 | None:intergenic |
TCTAGCAATGGCAAATTCCT+TGG | 0.469935 | 5_2:+9568454 | Msa0755730:exon |
GGACTTATATTTAAAAGCTC+TGG | 0.471062 | 5_2:+9574417 | Msa0755730:CDS |
CAATTCTAAAGCGTTAGACT+TGG | 0.471780 | 5_2:+9576248 | Msa0755730:CDS |
GTTTGATACGTTCAGTTGCC+GGG | 0.473503 | 5_2:+9570685 | Msa0755730:CDS |
TGCCTTAATCAATCTTGTCC+AGG | 0.474061 | 5_2:+9570764 | Msa0755730:CDS |
TGCGTTTGCAAGCTGCTGTC+TGG | 0.475109 | 5_2:+9573168 | Msa0755730:CDS |
GAATGCTGGTGATGTTCTCT+TGG | 0.475242 | 5_2:+9576120 | Msa0755730:CDS |
AAGTTAGGGTTGGGGTTTCG+TGG | 0.478751 | 5_2:-9568406 | None:intergenic |
GTTGAAGAGAGGCAGAGGTA+GGG | 0.483599 | 5_2:-9568345 | None:intergenic |
CAGAGTAAAGAATTGGATAG+AGG | 0.488546 | 5_2:+9568805 | Msa0755730:CDS |
TCGAGAAGTGTAGAAGAATC+TGG | 0.489532 | 5_2:-9573120 | None:intergenic |
CACACTTCCAACGAAGGCCT+TGG | 0.491384 | 5_2:+9570935 | Msa0755730:CDS |
CTAGTGTCAGCAGAATCTTC+AGG | 0.499962 | 5_2:+9576366 | Msa0755730:CDS |
AAGTGTGATGTTTCGCAGTA+GGG | 0.501036 | 5_2:-9568316 | None:intergenic |
CGAATGTCAATTAGCTGGCT+GGG | 0.504864 | 5_2:+9571681 | Msa0755730:intron |
TCCCACTCATCCTTCAGAAT+AGG | 0.507626 | 5_2:-9576088 | None:intergenic |
TCTGTTAAGGAATGGTATAT+GGG | 0.508750 | 5_2:+9569213 | Msa0755730:intron |
ATCAAACCATTCAAAAGAGA+TGG | 0.508806 | 5_2:-9570669 | None:intergenic |
AACTTGGATAACAGGAGGGC+AGG | 0.509236 | 5_2:-9576863 | None:intergenic |
TTTGCTGTCCTTGATAGAAA+AGG | 0.510636 | 5_2:+9571287 | Msa0755730:CDS |
ACAAATTATCCTTCTGAACT+CGG | 0.515618 | 5_2:+9571730 | Msa0755730:CDS |
GAAGTGTGATGTTTCGCAGT+AGG | 0.515692 | 5_2:-9568317 | None:intergenic |
TTTGTTCTATTGCAGTTCTG+TGG | 0.518338 | 5_2:+9575775 | Msa0755730:intron |
CCAGAAATTAATCTCAAGTA+CGG | 0.520084 | 5_2:-9568874 | None:intergenic |
AAGAATTGAGAAGTTAGGGT+TGG | 0.522630 | 5_2:-9568416 | None:intergenic |
AAGGAGTAATGGATAAATCA+TGG | 0.523492 | 5_2:-9574230 | None:intergenic |
AGAATCTTCAGGCAATCTAC+TGG | 0.527397 | 5_2:+9576377 | Msa0755730:CDS |
TCAAGGACAGCAAAGCCTGC+TGG | 0.528595 | 5_2:-9571278 | None:intergenic |
TCCTATTCTGAAGGATGAGT+GGG | 0.530051 | 5_2:+9576087 | Msa0755730:CDS |
AAACAAGGCATTTGTTTCAG+AGG | 0.532371 | 5_2:+9572177 | Msa0755730:CDS |
ATTACTCCTTGCTATGCCAC+AGG | 0.533955 | 5_2:+9574243 | Msa0755730:CDS |
ATAACCGTAAAGTTAATTGA+AGG | 0.534221 | 5_2:-9575653 | None:intergenic |
GGGTGCAACACTACCTAGAA+TGG | 0.535731 | 5_2:+9569261 | Msa0755730:CDS |
GAAATTACCTTGAGCAGCAA+TGG | 0.537836 | 5_2:-9568606 | None:intergenic |
TAGTACAGATACTTAAAATA+CGG | 0.538997 | 5_2:+9569114 | Msa0755730:CDS |
GTTTGGCTTGTATCATCCAA+AGG | 0.541542 | 5_2:+9571976 | Msa0755730:CDS |
AAAACATCCAAGGCCTTCGT+TGG | 0.546236 | 5_2:-9570942 | None:intergenic |
TGAAGACCAGAATTCACAAA+AGG | 0.550489 | 5_2:-9569538 | None:intergenic |
CTTAAGGGTGTGAAAGACTC+GGG | 0.550885 | 5_2:+9569241 | Msa0755730:CDS |
TCGAGTGTTTGAAGAGCAGC+CGG | 0.551588 | 5_2:-9568910 | None:intergenic |
TGGACTCCCTAATTATCTGC+AGG | 0.551807 | 5_2:+9571150 | Msa0755730:CDS |
ATTTACACCATTGCTGCTCA+AGG | 0.553655 | 5_2:+9568599 | Msa0755730:CDS |
TGCGGAATCAGTAAGTGCTA+TGG | 0.557132 | 5_2:-9568501 | None:intergenic |
TCTTAAGGGTGTGAAAGACT+CGG | 0.559147 | 5_2:+9569240 | Msa0755730:CDS |
TAAGGATGAAGACTGCCAGC+AGG | 0.559986 | 5_2:+9571263 | Msa0755730:CDS |
TGTGGCATAGCAAGGAGTAA+TGG | 0.562119 | 5_2:-9574241 | None:intergenic |
GTGAACGACGTCGTTTCGGT+TGG | 0.564573 | 5_2:+9568269 | None:intergenic |
GACAATTCTAATAAAACCCC+GGG | 0.565313 | 5_2:-9571089 | None:intergenic |
GAATTGAGAAGTTAGGGTTG+GGG | 0.569022 | 5_2:-9568414 | None:intergenic |
AGCTTGTAATTGAGAAGCCA+AGG | 0.570228 | 5_2:-9568471 | None:intergenic |
TAGTTTCTTTAAAACATCCA+AGG | 0.571442 | 5_2:-9570952 | None:intergenic |
AATCAACATTATATTCAGGC+TGG | 0.573720 | 5_2:-9575702 | None:intergenic |
CGGGATTGCTCGTGCTTGTG+AGG | 0.575385 | 5_2:+9570704 | Msa0755730:CDS |
AAAGATTCTCTAAGAATGCA+AGG | 0.576036 | 5_2:-9576275 | None:intergenic |
TTCTGATTAGCACTGATGAA+CGG | 0.587650 | 5_2:+9568749 | Msa0755730:CDS |
TTCCTATTCTGAAGGATGAG+TGG | 0.589217 | 5_2:+9576086 | Msa0755730:CDS |
AATGCATGTGTGTCGTGGTA+AGG | 0.591387 | 5_2:-9569083 | None:intergenic |
AGAGTAAAGAATTGGATAGA+GGG | 0.592118 | 5_2:+9568806 | Msa0755730:CDS |
TGGGAATCTTTAGTGAATGC+TGG | 0.593145 | 5_2:+9576106 | Msa0755730:CDS |
GGATTCAGTACTCTTATCAG+CGG | 0.596784 | 5_2:-9568576 | None:intergenic |
ACTGCTGCACCGAGTTCAGA+AGG | 0.604583 | 5_2:-9571739 | None:intergenic |
TCATCGCAAAACTCTAGCAA+TGG | 0.605505 | 5_2:+9568442 | Msa0755730:exon |
ACCTGACATCGAAGATGTTG+AGG | 0.611309 | 5_2:-9571388 | None:intergenic |
TAGGATCGAACAAGATAGAA+GGG | 0.611968 | 5_2:-9568547 | None:intergenic |
AAGTGTGTTTCCTATTCTGA+AGG | 0.612237 | 5_2:+9576078 | Msa0755730:CDS |
GATTGCTCGTGCTTGTGAGG+AGG | 0.618365 | 5_2:+9570707 | Msa0755730:CDS |
AGACAATTCTAATAAAACCC+CGG | 0.620522 | 5_2:-9571090 | None:intergenic |
GTGCAACCTGTGGCATAGCA+AGG | 0.622039 | 5_2:-9574249 | None:intergenic |
CAGCAATGTCTTCGTGATGG+TGG | 0.624348 | 5_2:+9569292 | Msa0755730:CDS |
CTATCCAATTCTTTACTCTG+GGG | 0.626014 | 5_2:-9568802 | None:intergenic |
TGCAGACATCAATACCTCGA+TGG | 0.629029 | 5_2:+9575627 | Msa0755730:intron |
GATACATGAGCACAATGTTG+AGG | 0.631551 | 5_2:+9569040 | Msa0755730:CDS |
AGATTCTTCTACACTTCTCG+AGG | 0.637603 | 5_2:+9573122 | Msa0755730:CDS |
TGTGGACACACTTCCAACGA+AGG | 0.640723 | 5_2:+9570929 | Msa0755730:CDS |
GAAGTATCTTTCAGATCACA+AGG | 0.644408 | 5_2:+9569570 | Msa0755730:CDS |
TGGTGATGTTCTCTTGGACG+AGG | 0.644450 | 5_2:+9576126 | Msa0755730:CDS |
AAACGAAGAAGAAGAACACG+AGG | 0.654037 | 5_2:+9568383 | Msa0755730:five_prime_UTR |
GGGTCTTACTGACATTCAAG+AGG | 0.662039 | 5_2:+9573020 | Msa0755730:intron |
GTTCTGTGGATAAGACCAGA+AGG | 0.664612 | 5_2:+9575789 | Msa0755730:intron |
GTGCAGCAATGTCTTCGTGA+TGG | 0.666314 | 5_2:+9569289 | Msa0755730:CDS |
TCAGGAAAGAGGTTGAAGAG+AGG | 0.667916 | 5_2:-9568356 | None:intergenic |
GATGAACAGAGTCATTTATG+GGG | 0.694679 | 5_2:-9571311 | None:intergenic |
GAACAAATGCATGTGTGTCG+TGG | 0.697055 | 5_2:-9569088 | None:intergenic |
ATGGGGTGCATCAAGCAACA+GGG | 0.701286 | 5_2:-9576915 | None:intergenic |
TTAATTGAAGGTAACCATCG+AGG | 0.719373 | 5_2:-9575641 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTGTTTTTATTTTTGTA+CGG | + | chr5_2:9568972-9568991 | Msa0755730:intron | 10.0% |
!! | TTAAAATAATAATATACATG+TGG | + | chr5_2:9569598-9569617 | Msa0755730:intron | 10.0% |
!! | TAAAATAATAATATACATGT+GGG | + | chr5_2:9569599-9569618 | Msa0755730:intron | 10.0% |
!! | TATTACGAATTAAAAATAAA+GGG | - | chr5_2:9569957-9569976 | None:intergenic | 10.0% |
!! | CAATTACAATTATATAATAT+AGG | - | chr5_2:9570535-9570554 | None:intergenic | 10.0% |
!! | ATATACATATTAAAAACAAA+TGG | - | chr5_2:9571034-9571053 | None:intergenic | 10.0% |
!!! | TTATATTTTTTTTCTGAAAA+AGG | + | chr5_2:9572431-9572450 | Msa0755730:intron | 10.0% |
!! | TTGATATAAAATAATTGAAT+TGG | - | chr5_2:9573587-9573606 | None:intergenic | 10.0% |
!! | AAATACAAATTGAAATATAT+GGG | - | chr5_2:9573639-9573658 | None:intergenic | 10.0% |
!! | AAAATACAAATTGAAATATA+TGG | - | chr5_2:9573640-9573659 | None:intergenic | 10.0% |
!! | AAACACAAATAAAATTATTT+AGG | + | chr5_2:9575069-9575088 | Msa0755730:intron | 10.0% |
!! | CTATTACGAATTAAAAATAA+AGG | - | chr5_2:9569958-9569977 | None:intergenic | 15.0% |
!!! | GTTTTTAAACTATAAATTAG+AGG | - | chr5_2:9570424-9570443 | None:intergenic | 15.0% |
!! | ATACTTCAAAGAAATATATA+TGG | - | chr5_2:9570561-9570580 | None:intergenic | 15.0% |
!! | AAATTTAAAAAGAATGGAAA+TGG | + | chr5_2:9571448-9571467 | Msa0755730:intron | 15.0% |
!! | ATCAGTTATGTAAAATAATT+TGG | - | chr5_2:9572932-9572951 | None:intergenic | 15.0% |
!! | GTGGTATATTAAAAATAATT+TGG | + | chr5_2:9573196-9573215 | Msa0755730:intron | 15.0% |
!! | TAACAAAATAAAAAATTCAG+AGG | - | chr5_2:9573906-9573925 | None:intergenic | 15.0% |
!! | AAAAACAAAACTTCAAAAAT+TGG | + | chr5_2:9574718-9574737 | Msa0755730:intron | 15.0% |
!! | AAAAACAAAACTTCAAAATT+TGG | + | chr5_2:9575446-9575465 | Msa0755730:intron | 15.0% |
!! | AGATCATATTTGTTTAAAAA+CGG | + | chr5_2:9575892-9575911 | Msa0755730:intron | 15.0% |
!! | CTGAATATGAATTGAATATT+TGG | + | chr5_2:9568706-9568725 | Msa0755730:intron | 20.0% |
!! | TAGTACAGATACTTAAAATA+CGG | + | chr5_2:9569114-9569133 | Msa0755730:CDS | 20.0% |
!! | ATAGAATCATAAGTTTAAAG+TGG | - | chr5_2:9570180-9570199 | None:intergenic | 20.0% |
!! | TTAAATACATGTTCAGTTAT+AGG | + | chr5_2:9570310-9570329 | Msa0755730:intron | 20.0% |
!! | TAAATACATGTTCAGTTATA+GGG | + | chr5_2:9570311-9570330 | Msa0755730:intron | 20.0% |
!! | TATAGCCAAGTTAAAAAAAT+AGG | - | chr5_2:9570868-9570887 | None:intergenic | 20.0% |
!!! | TTATGAATCCTTTTTTCATA+GGG | + | chr5_2:9571061-9571080 | Msa0755730:intron | 20.0% |
!! | TGAGAGAAATTTAAAAAGAA+TGG | + | chr5_2:9571442-9571461 | Msa0755730:intron | 20.0% |
!! | ATTGCATTAACTAAATAGTT+TGG | - | chr5_2:9571599-9571618 | None:intergenic | 20.0% |
!!! | TAAGATTTTATGTAAGATGT+TGG | + | chr5_2:9571907-9571926 | Msa0755730:CDS | 20.0% |
!!! | ATTCTTATTTGATATGTTGT+AGG | + | chr5_2:9572102-9572121 | Msa0755730:intron | 20.0% |
!!! | TTGTAAAGTATCAACAATAT+AGG | - | chr5_2:9572355-9572374 | None:intergenic | 20.0% |
!!! | ATTTTTCAAAACTTTGAACA+AGG | - | chr5_2:9572680-9572699 | None:intergenic | 20.0% |
!! | ATGTAACATTTAAACAAAAG+AGG | - | chr5_2:9573236-9573255 | None:intergenic | 20.0% |
!!! | TTAACTGTAAAATCTAAGAT+GGG | - | chr5_2:9573721-9573740 | None:intergenic | 20.0% |
!! | ATTAACTGTAAAATCTAAGA+TGG | - | chr5_2:9573722-9573741 | None:intergenic | 20.0% |
!! | TTACAGTTAATTATAAAGAG+AGG | + | chr5_2:9573731-9573750 | Msa0755730:intron | 20.0% |
!!! | CTAAATCAAATTCTAAAATG+AGG | - | chr5_2:9574045-9574064 | None:intergenic | 20.0% |
!!! | CTCATTTTAGAATTTGATTT+AGG | + | chr5_2:9574043-9574062 | Msa0755730:intron | 20.0% |
!! | ATTTAGGCCTAATATATATT+GGG | + | chr5_2:9574059-9574078 | Msa0755730:intron | 20.0% |
!!! | TTTTTCAAATAATCTTATGC+AGG | + | chr5_2:9574109-9574128 | Msa0755730:intron | 20.0% |
!! | AAGAAAGATTTAACATATTC+CGG | + | chr5_2:9574302-9574321 | Msa0755730:intron | 20.0% |
!! | TAATCAATATATGACAAACT+TGG | - | chr5_2:9574584-9574603 | None:intergenic | 20.0% |
!!! | TGCCTAAATTTTTTACATTT+GGG | + | chr5_2:9575193-9575212 | Msa0755730:intron | 20.0% |
!! | AACCCAAATGTAAAAAATTT+AGG | - | chr5_2:9575198-9575217 | None:intergenic | 20.0% |
!! | AATGCAAAAATATTACAAAC+TGG | - | chr5_2:9574512-9574531 | None:intergenic | 20.0% |
!!! | TAACTTTTCAAATAAGACTT+CGG | - | chr5_2:9575353-9575372 | None:intergenic | 20.0% |
!! | GATCATATTTGTTTAAAAAC+GGG | + | chr5_2:9575893-9575912 | Msa0755730:intron | 20.0% |
!! | ATCATATTTGTTTAAAAACG+GGG | + | chr5_2:9575894-9575913 | Msa0755730:intron | 20.0% |
!!! | TATTCTCTTATTTTTTCACT+TGG | + | chr5_2:9576180-9576199 | Msa0755730:intron | 20.0% |
!! | AATTCAAGCATAACAAATAA+GGG | - | chr5_2:9576415-9576434 | None:intergenic | 20.0% |
!! | GAAAAAAGAATTCCAAAATA+AGG | - | chr5_2:9576463-9576482 | None:intergenic | 20.0% |
!!! | TTCTGGATATTTTAATCTTC+CGG | + | chr5_2:9568891-9568910 | Msa0755730:CDS | 25.0% |
!!! | TTTGATTTGTTATGTGTTTC+AGG | + | chr5_2:9569018-9569037 | Msa0755730:intron | 25.0% |
!! | TTATTGTTTGTTACGTTCTT+TGG | + | chr5_2:9569148-9569167 | Msa0755730:intron | 25.0% |
! | ATGGTTTCTGATGTATTTAT+TGG | + | chr5_2:9569188-9569207 | Msa0755730:intron | 25.0% |
! | TGGTTTCTGATGTATTTATT+GGG | + | chr5_2:9569189-9569208 | Msa0755730:intron | 25.0% |
!!! | ATAACTATGTTTTTTGTCAC+AGG | + | chr5_2:9569408-9569427 | Msa0755730:intron | 25.0% |
!!! | TACATTCTTTGAAGGATTTT+TGG | - | chr5_2:9569443-9569462 | None:intergenic | 25.0% |
! | AATCCTTCAAAGAATGTAAT+TGG | + | chr5_2:9569445-9569464 | Msa0755730:CDS | 25.0% |
! | ACTTCTTAACAAAAAGGTTT+CGG | - | chr5_2:9569688-9569707 | None:intergenic | 25.0% |
! | AATAGCACTTCTTAACAAAA+AGG | - | chr5_2:9569694-9569713 | None:intergenic | 25.0% |
! | AAGTCATTAAACTCTGTAAT+AGG | + | chr5_2:9569803-9569822 | Msa0755730:intron | 25.0% |
! | ATATAATAACCAAATCCACA+TGG | + | chr5_2:9569842-9569861 | Msa0755730:intron | 25.0% |
!!! | TCTGTAAAATTTTGCTATGA+AGG | + | chr5_2:9569906-9569925 | Msa0755730:intron | 25.0% |
! | TCAATTTCAAATATGGAGAA+TGG | - | chr5_2:9570015-9570034 | None:intergenic | 25.0% |
!! | ATTCTCCATATTTGAAATTG+AGG | + | chr5_2:9570014-9570033 | Msa0755730:intron | 25.0% |
!!! | ATATCTATCACCTTACTTTT+TGG | + | chr5_2:9570198-9570217 | Msa0755730:intron | 25.0% |
! | GTATTCTTCATTATTCATTC+AGG | + | chr5_2:9570456-9570475 | Msa0755730:intron | 25.0% |
!!! | TTCAGATGTTACGTTTTTTT+TGG | + | chr5_2:9570506-9570525 | Msa0755730:intron | 25.0% |
!!! | CTAAAGATCTTTATTGGTTT+CGG | + | chr5_2:9570730-9570749 | Msa0755730:CDS | 25.0% |
! | AAGATTGATTAAGGCAATAA+GGG | - | chr5_2:9570760-9570779 | None:intergenic | 25.0% |
!!! | TAGTTTCTTTAAAACATCCA+AGG | - | chr5_2:9570955-9570974 | None:intergenic | 25.0% |
!!! | TGGATGTTTTAAAGAAACTA+AGG | + | chr5_2:9570955-9570974 | Msa0755730:CDS | 25.0% |
!!! | CTTATGAATCCTTTTTTCAT+AGG | + | chr5_2:9571060-9571079 | Msa0755730:intron | 25.0% |
!!! | GGTTTTATTAGAATTGTCTA+AGG | + | chr5_2:9571094-9571113 | Msa0755730:CDS | 25.0% |
!! | TAATTCTATGGTTTTCTTTC+TGG | + | chr5_2:9571176-9571195 | Msa0755730:intron | 25.0% |
!! | ATTTTATGTAAGATGTTGGA+TGG | + | chr5_2:9571911-9571930 | Msa0755730:CDS | 25.0% |
!! | TTTTATGTAAGATGTTGGAT+GGG | + | chr5_2:9571912-9571931 | Msa0755730:CDS | 25.0% |
! | ATATCAAATAAGAATGAAGC+TGG | - | chr5_2:9572097-9572116 | None:intergenic | 25.0% |
! | ACTGCTTGATATAAATTCTT+CGG | + | chr5_2:9572144-9572163 | Msa0755730:CDS | 25.0% |
!! | TAGTATAAACGTACAGTTTT+GGG | - | chr5_2:9572234-9572253 | None:intergenic | 25.0% |
!! | TTAGTATAAACGTACAGTTT+TGG | - | chr5_2:9572235-9572254 | None:intergenic | 25.0% |
! | AAAACTAATATCAACCCAAA+AGG | - | chr5_2:9572307-9572326 | None:intergenic | 25.0% |
! | CAGTTTGACAGTAAAAAAAA+TGG | - | chr5_2:9572463-9572482 | None:intergenic | 25.0% |
!!! | CATTTTTTTTACTGTCAAAC+TGG | + | chr5_2:9572461-9572480 | Msa0755730:intron | 25.0% |
! | TCAGTTCAAATCATTTGAAA+TGG | - | chr5_2:9572521-9572540 | None:intergenic | 25.0% |
!! | TTTTGATAGAAGACTTGATT+AGG | + | chr5_2:9572626-9572645 | Msa0755730:intron | 25.0% |
!! | GGTGATTTAAAATATGGAAT+AGG | - | chr5_2:9572956-9572975 | None:intergenic | 25.0% |
!!! | ATGGTTGGTGATTTAAAATA+TGG | - | chr5_2:9572962-9572981 | None:intergenic | 25.0% |
! | AAAGCGCAAACAAATATATT+TGG | + | chr5_2:9573257-9573276 | Msa0755730:intron | 25.0% |
!!! | TGGGAATATGTTATTTTTCT+AGG | + | chr5_2:9573416-9573435 | Msa0755730:intron | 25.0% |
!! | AATTGAAATATATGGGTTGA+AGG | - | chr5_2:9573632-9573651 | None:intergenic | 25.0% |
!! | ATGGGTTTAATTTAAAACCA+TGG | - | chr5_2:9573703-9573722 | None:intergenic | 25.0% |
!! | AGCAGCATAATAAATTTTAG+AGG | - | chr5_2:9573819-9573838 | None:intergenic | 25.0% |
! | GATTTAGGCCTAATATATAT+TGG | + | chr5_2:9574058-9574077 | Msa0755730:intron | 25.0% |
! | GACAGTAAGACTATTATTAT+CGG | - | chr5_2:9574140-9574159 | None:intergenic | 25.0% |
! | TACTAGTCAAAGAAATTAAC+TGG | + | chr5_2:9574440-9574459 | Msa0755730:CDS | 25.0% |
! | TCAAATTGATGAGATAGTAT+CGG | + | chr5_2:9574651-9574670 | Msa0755730:intron | 25.0% |
!!! | TTTGTTTTTTCAAAGTCTAC+TGG | - | chr5_2:9574707-9574726 | None:intergenic | 25.0% |
!!! | GTGCCTAAATTTTTTACATT+TGG | + | chr5_2:9575192-9575211 | Msa0755730:intron | 25.0% |
! | ATTAACAATTTAGAAGTTCG+TGG | - | chr5_2:9575557-9575576 | None:intergenic | 25.0% |
! | GTTACCTTCAATTAACTTTA+CGG | + | chr5_2:9575649-9575668 | Msa0755730:CDS | 25.0% |
! | ATAACCGTAAAGTTAATTGA+AGG | - | chr5_2:9575656-9575675 | None:intergenic | 25.0% |
! | AACCAATCAACATTATATTC+AGG | - | chr5_2:9575709-9575728 | None:intergenic | 25.0% |
!! | TATTCGATTTGAGGAAAAAT+GGG | - | chr5_2:9575841-9575860 | None:intergenic | 25.0% |
! | TTATCACCTTTGATCAAAAT+AGG | - | chr5_2:9576037-9576056 | None:intergenic | 25.0% |
!!! | ATTTTGATCAAAGGTGATAA+TGG | + | chr5_2:9576037-9576056 | Msa0755730:intron | 25.0% |
!!! | TAACCTTCTTTTGTTTGTTT+TGG | + | chr5_2:9576211-9576230 | Msa0755730:intron | 25.0% |
! | ATTCCAAAACAAACAAAAGA+AGG | - | chr5_2:9576217-9576236 | None:intergenic | 25.0% |
!!! | AAGTTATGGTTTGCATATTT+TGG | + | chr5_2:9576328-9576347 | Msa0755730:CDS | 25.0% |
! | GAATTCAAGCATAACAAATA+AGG | - | chr5_2:9576416-9576435 | None:intergenic | 25.0% |
!!! | TTAACTCTGTTTCCTTATTT+TGG | + | chr5_2:9576448-9576467 | Msa0755730:intron | 25.0% |
!!! | GGAATTCTTTTTTCTCTTAT+TGG | + | chr5_2:9576469-9576488 | Msa0755730:intron | 25.0% |
! | AAGTGCAGTATGATATTAAT+AGG | - | chr5_2:9576534-9576553 | None:intergenic | 25.0% |
! | ATTAATATCATACTGCACTT+AGG | + | chr5_2:9576534-9576553 | Msa0755730:intron | 25.0% |
!!! | CAATATCATTAACTTGCAAA+TGG | + | chr5_2:9576563-9576582 | Msa0755730:intron | 25.0% |
AACGAAGAATTGAGAAGTTA+GGG | - | chr5_2:9568423-9568442 | None:intergenic | 30.0% | |
TCTATCCAATTCTTTACTCT+GGG | - | chr5_2:9568806-9568825 | None:intergenic | 30.0% | |
AGAGTAAAGAATTGGATAGA+GGG | + | chr5_2:9568806-9568825 | Msa0755730:CDS | 30.0% | |
CCAGAAATTAATCTCAAGTA+CGG | - | chr5_2:9568877-9568896 | None:intergenic | 30.0% | |
GTATTTATTGGGTTCTGTTA+AGG | + | chr5_2:9569200-9569219 | Msa0755730:intron | 30.0% | |
TTCTGTTAAGGAATGGTATA+TGG | + | chr5_2:9569212-9569231 | Msa0755730:intron | 30.0% | |
TCTGTTAAGGAATGGTATAT+GGG | + | chr5_2:9569213-9569232 | Msa0755730:intron | 30.0% | |
!! | TTCTTTGAAGGATTTTTGGA+TGG | - | chr5_2:9569439-9569458 | None:intergenic | 30.0% |
AAGCCAATTACATTCTTTGA+AGG | - | chr5_2:9569451-9569470 | None:intergenic | 30.0% | |
! | ATACATCCTTTTGTGAATTC+TGG | + | chr5_2:9569532-9569551 | Msa0755730:CDS | 30.0% |
TCTGAAAGATACTTCTTATC+AGG | - | chr5_2:9569565-9569584 | None:intergenic | 30.0% | |
! | ATAAGTCTTGTAGCATAAGT+TGG | + | chr5_2:9569662-9569681 | Msa0755730:intron | 30.0% |
GGGTAACAATAAATAATGTG+AGG | - | chr5_2:9569937-9569956 | None:intergenic | 30.0% | |
TTCCTCCTCAATTTCAAATA+TGG | - | chr5_2:9570022-9570041 | None:intergenic | 30.0% | |
TTCTCAAACACACATGTTTA+AGG | + | chr5_2:9570092-9570111 | Msa0755730:intron | 30.0% | |
ATGTTCTTTGGTCTATTTGA+CGG | - | chr5_2:9570146-9570165 | None:intergenic | 30.0% | |
GAAACTTAGTCCAAAAAGTA+AGG | - | chr5_2:9570211-9570230 | None:intergenic | 30.0% | |
TAAACTATAAATTAGAGGCC+AGG | - | chr5_2:9570419-9570438 | None:intergenic | 30.0% | |
ACAGAATCTAAACACAAGAT+TGG | - | chr5_2:9570486-9570505 | None:intergenic | 30.0% | |
AATGACAATAGTTCAACAGA+AGG | - | chr5_2:9570594-9570613 | None:intergenic | 30.0% | |
! | TGTTGAACTATTGTCATTTC+AGG | + | chr5_2:9570596-9570615 | Msa0755730:intron | 30.0% |
ATCAAACCATTCAAAAGAGA+TGG | - | chr5_2:9570672-9570691 | None:intergenic | 30.0% | |
CAAGATTGATTAAGGCAATA+AGG | - | chr5_2:9570761-9570780 | None:intergenic | 30.0% | |
GTCAATACGATTAATCAAAC+AGG | - | chr5_2:9570820-9570839 | None:intergenic | 30.0% | |
CCAAGTTAAAAAAATAGGCA+CGG | - | chr5_2:9570863-9570882 | None:intergenic | 30.0% | |
AGACAATTCTAATAAAACCC+CGG | - | chr5_2:9571093-9571112 | None:intergenic | 30.0% | |
TTATCACCTGCAGATAATTA+GGG | - | chr5_2:9571159-9571178 | None:intergenic | 30.0% | |
ATTATCACCTGCAGATAATT+AGG | - | chr5_2:9571160-9571179 | None:intergenic | 30.0% | |
TATAATCATTCGCAGTTCTA+AGG | + | chr5_2:9571245-9571264 | Msa0755730:intron | 30.0% | |
TGATGAACAGAGTCATTTAT+GGG | - | chr5_2:9571315-9571334 | None:intergenic | 30.0% | |
ATGATGAACAGAGTCATTTA+TGG | - | chr5_2:9571316-9571335 | None:intergenic | 30.0% | |
!! | ATAGTTTCACACAAGTTGAT+AGG | - | chr5_2:9571353-9571372 | None:intergenic | 30.0% |
GTGAAACTATCAGAAAAAGT+TGG | + | chr5_2:9571363-9571382 | Msa0755730:CDS | 30.0% | |
TTCTGTATTCAATCAGCAAA+TGG | + | chr5_2:9571473-9571492 | Msa0755730:intron | 30.0% | |
AAAAACTGAGTTGTGTACAA+CGG | - | chr5_2:9571566-9571585 | None:intergenic | 30.0% | |
!! | TTTTTCGAATGTCAATTAGC+TGG | + | chr5_2:9571676-9571695 | Msa0755730:intron | 30.0% |
ACAAATTATCCTTCTGAACT+CGG | + | chr5_2:9571730-9571749 | Msa0755730:CDS | 30.0% | |
ATATCTCGAAGTCAAAAGTT+TGG | + | chr5_2:9571954-9571973 | Msa0755730:CDS | 30.0% | |
CTGCTTGATATAAATTCTTC+GGG | + | chr5_2:9572145-9572164 | Msa0755730:CDS | 30.0% | |
TGAAATGGAACTCAACATAT+AGG | - | chr5_2:9572506-9572525 | None:intergenic | 30.0% | |
ATGGGGTAATCTTCATAAAT+TGG | + | chr5_2:9572813-9572832 | Msa0755730:intron | 30.0% | |
!! | GTCAAAGCTTTATTTGTGTT+GGG | + | chr5_2:9572835-9572854 | Msa0755730:intron | 30.0% |
! | CCTGATCAACAAAACATTTT+GGG | - | chr5_2:9573002-9573021 | None:intergenic | 30.0% |
!! | CCAAAATGTTTTGTTGATCA+GGG | + | chr5_2:9573000-9573019 | Msa0755730:intron | 30.0% |
ATCATCAAACTGTCTCAATA+TGG | - | chr5_2:9573046-9573065 | None:intergenic | 30.0% | |
! | ACAGTACATTTATCGATTGT+TGG | + | chr5_2:9573359-9573378 | Msa0755730:intron | 30.0% |
! | TTCCTGTTCTTTTTGATGAA+TGG | + | chr5_2:9573553-9573572 | Msa0755730:intron | 30.0% |
TAAAACCATGGTCATCAATT+TGG | - | chr5_2:9573691-9573710 | None:intergenic | 30.0% | |
TTGCTGAGATAAATGATTGT+TGG | + | chr5_2:9573845-9573864 | Msa0755730:intron | 30.0% | |
AGAGAGAGCTTAACTAAATT+GGG | - | chr5_2:9573878-9573897 | None:intergenic | 30.0% | |
AAGAGAGAGCTTAACTAAAT+TGG | - | chr5_2:9573879-9573898 | None:intergenic | 30.0% | |
TATTCCCTAACAAAACTCAA+AGG | + | chr5_2:9573927-9573946 | Msa0755730:intron | 30.0% | |
!!! | ACTTCCTTTGAGTTTTGTTA+GGG | - | chr5_2:9573934-9573953 | None:intergenic | 30.0% |
!!! | AACTTCCTTTGAGTTTTGTT+AGG | - | chr5_2:9573935-9573954 | None:intergenic | 30.0% |
!! | AAGGAGTAATGGATAAATCA+TGG | - | chr5_2:9574233-9574252 | None:intergenic | 30.0% |
TTCAGATTTATGCTTTGTCT+TGG | + | chr5_2:9574354-9574373 | Msa0755730:intron | 30.0% | |
CAATAAAAGAAGTAATCGTC+AGG | - | chr5_2:9574389-9574408 | None:intergenic | 30.0% | |
GGACTTATATTTAAAAGCTC+TGG | + | chr5_2:9574417-9574436 | Msa0755730:CDS | 30.0% | |
TGAAGAAGTAAGTAACTACA+TGG | + | chr5_2:9574483-9574502 | Msa0755730:intron | 30.0% | |
GAAGAAGTAAGTAACTACAT+GGG | + | chr5_2:9574484-9574503 | Msa0755730:intron | 30.0% | |
! | ACTTTTTGAACAACAGACAT+TGG | - | chr5_2:9574623-9574642 | None:intergenic | 30.0% |
! | GACTGATTCTATATTCATCT+CGG | - | chr5_2:9574677-9574696 | None:intergenic | 30.0% |
AGTCAAACTTATAGTATGTC+AGG | - | chr5_2:9574761-9574780 | None:intergenic | 30.0% | |
CATACTATAAGTTTGACTGT+AGG | + | chr5_2:9574763-9574782 | Msa0755730:intron | 30.0% | |
TATAAGTTTGACTGTAGGAA+TGG | + | chr5_2:9574768-9574787 | Msa0755730:intron | 30.0% | |
ATTAACAATTTAGAAGTCCG+TGG | - | chr5_2:9574842-9574861 | None:intergenic | 30.0% | |
CATTGAAATGTAATGATGAC+TGG | - | chr5_2:9574870-9574889 | None:intergenic | 30.0% | |
CAGTCATCATTACATTTCAA+TGG | + | chr5_2:9574868-9574887 | Msa0755730:intron | 30.0% | |
! | ATTACATTTCAATGGACTTC+TGG | + | chr5_2:9574876-9574895 | Msa0755730:intron | 30.0% |
AGAAGTAAACGTCAAGATAA+TGG | - | chr5_2:9574908-9574927 | None:intergenic | 30.0% | |
! | ACTTTAAAAGCTCTAGTACT+AGG | + | chr5_2:9574950-9574969 | Msa0755730:intron | 30.0% |
TGAGAATATTGCTGAAGAAA+CGG | + | chr5_2:9574997-9575016 | Msa0755730:intron | 30.0% | |
AGAAACGGTAAATAACTACA+TGG | + | chr5_2:9575012-9575031 | Msa0755730:intron | 30.0% | |
GAAACGGTAAATAACTACAT+GGG | + | chr5_2:9575013-9575032 | Msa0755730:intron | 30.0% | |
ACTGGAGAAAATACTTACAT+AGG | - | chr5_2:9575225-9575244 | None:intergenic | 30.0% | |
! | GACTGATTCTATATTCATCT+TGG | - | chr5_2:9574677-9574696 | None:intergenic | 30.0% |
AGATGAATATAGAATCAGTC+AGG | + | chr5_2:9574677-9574696 | Msa0755730:intron | 30.0% | |
!!! | TTTGTTTTTTCCAAGTCTAC+TGG | - | chr5_2:9575435-9575454 | None:intergenic | 30.0% |
CAAGATACTAGTGTACTATT+CGG | - | chr5_2:9575522-9575541 | None:intergenic | 30.0% | |
! | ACACTAGTATCTTGATGTTT+TGG | + | chr5_2:9575528-9575547 | Msa0755730:intron | 30.0% |
CTTTACGGTTATCTGTAAAT+TGG | + | chr5_2:9575664-9575683 | Msa0755730:CDS | 30.0% | |
AATCAACATTATATTCAGGC+TGG | - | chr5_2:9575705-9575724 | None:intergenic | 30.0% | |
AGCCTGAATATAATGTTGAT+TGG | + | chr5_2:9575704-9575723 | Msa0755730:CDS | 30.0% | |
CAAAAACAAAACAAACCTTC+TGG | - | chr5_2:9575807-9575826 | None:intergenic | 30.0% | |
! | CTATTCGATTTGAGGAAAAA+TGG | - | chr5_2:9575842-9575861 | None:intergenic | 30.0% |
! | GTTATCTACTATTCGATTTG+AGG | - | chr5_2:9575850-9575869 | None:intergenic | 30.0% |
!!! | TGACTTCCTATTTTGATCAA+AGG | + | chr5_2:9576028-9576047 | Msa0755730:intron | 30.0% |
! | AAAGATTCTCTAAGAATGCA+AGG | - | chr5_2:9576278-9576297 | None:intergenic | 30.0% |
ACCTCAAAATGCAAAAGTTA+TGG | + | chr5_2:9576314-9576333 | Msa0755730:CDS | 30.0% | |
! | ACCATAACTTTTGCATTTTG+AGG | - | chr5_2:9576318-9576337 | None:intergenic | 30.0% |
!! | TTATGGTTTGCATATTTTGG+AGG | + | chr5_2:9576331-9576350 | Msa0755730:CDS | 30.0% |
! | AATGACTTTTTGCAATATGC+AGG | + | chr5_2:9576733-9576752 | Msa0755730:intron | 30.0% |
TAAAAACTTGGATAACAGGA+GGG | - | chr5_2:9576870-9576889 | None:intergenic | 30.0% | |
TCTGTAAAAACTTGGATAAC+AGG | - | chr5_2:9576874-9576893 | None:intergenic | 30.0% | |
AGAATTGAGAAGTTAGGGTT+GGG | - | chr5_2:9568418-9568437 | None:intergenic | 35.0% | |
AAGAATTGAGAAGTTAGGGT+TGG | - | chr5_2:9568419-9568438 | None:intergenic | 35.0% | |
GAACGAAGAATTGAGAAGTT+AGG | - | chr5_2:9568424-9568443 | None:intergenic | 35.0% | |
TAGGATCGAACAAGATAGAA+GGG | - | chr5_2:9568550-9568569 | None:intergenic | 35.0% | |
TTAGGATCGAACAAGATAGA+AGG | - | chr5_2:9568551-9568570 | None:intergenic | 35.0% | |
!! | TTCTGATTAGCACTGATGAA+CGG | + | chr5_2:9568749-9568768 | Msa0755730:CDS | 35.0% |
CTATCCAATTCTTTACTCTG+GGG | - | chr5_2:9568805-9568824 | None:intergenic | 35.0% | |
CTCTATCCAATTCTTTACTC+TGG | - | chr5_2:9568807-9568826 | None:intergenic | 35.0% | |
CAGAGTAAAGAATTGGATAG+AGG | + | chr5_2:9568805-9568824 | Msa0755730:CDS | 35.0% | |
CCGTACTTGAGATTAATTTC+TGG | + | chr5_2:9568874-9568893 | Msa0755730:CDS | 35.0% | |
! | TGTACGGTGATTATGTTTTG+CGG | + | chr5_2:9568988-9569007 | Msa0755730:intron | 35.0% |
GGTTGTGTTGTGAATTGTAA+TGG | + | chr5_2:9569169-9569188 | Msa0755730:intron | 35.0% | |
TATTGGGTTCTGTTAAGGAA+TGG | + | chr5_2:9569205-9569224 | Msa0755730:intron | 35.0% | |
TGGTATATGGGAGTTTCTTA+AGG | + | chr5_2:9569225-9569244 | Msa0755730:CDS | 35.0% | |
GGTATATGGGAGTTTCTTAA+GGG | + | chr5_2:9569226-9569245 | Msa0755730:CDS | 35.0% | |
AAATTCACAGCTAAACACTC+GGG | - | chr5_2:9569359-9569378 | None:intergenic | 35.0% | |
CAAATTCACAGCTAAACACT+CGG | - | chr5_2:9569360-9569379 | None:intergenic | 35.0% | |
!! | TGCTGTTGTTGTTGAAGTTT+TGG | + | chr5_2:9569477-9569496 | Msa0755730:CDS | 35.0% |
!! | GCTGTTGTTGTTGAAGTTTT+GGG | + | chr5_2:9569478-9569497 | Msa0755730:CDS | 35.0% |
TGAAGACCAGAATTCACAAA+AGG | - | chr5_2:9569541-9569560 | None:intergenic | 35.0% | |
! | GAAGTATCTTTCAGATCACA+AGG | + | chr5_2:9569570-9569589 | Msa0755730:CDS | 35.0% |
AATAACCAAATCCACATGGT+TGG | + | chr5_2:9569846-9569865 | Msa0755730:intron | 35.0% | |
! | CTCCATATTTGAAATTGAGG+AGG | + | chr5_2:9570017-9570036 | Msa0755730:intron | 35.0% |
!! | TTTGAGAAACAGTTGGTTTG+TGG | - | chr5_2:9570080-9570099 | None:intergenic | 35.0% |
ATGTGTGTTTGAGAAACAGT+TGG | - | chr5_2:9570087-9570106 | None:intergenic | 35.0% | |
TGTTCTTTGGTCTATTTGAC+GGG | - | chr5_2:9570145-9570164 | None:intergenic | 35.0% | |
AGGTCTATGATAGTAAAGCT+TGG | + | chr5_2:9570254-9570273 | Msa0755730:intron | 35.0% | |
TCTATGATAGTAAAGCTTGG+AGG | + | chr5_2:9570257-9570276 | Msa0755730:intron | 35.0% | |
! | TAAAGCTTGGAGGTATAGTT+GGG | + | chr5_2:9570267-9570286 | Msa0755730:intron | 35.0% |
ATACATGTTCAGTTATAGGG+AGG | + | chr5_2:9570314-9570333 | Msa0755730:intron | 35.0% | |
TACATGTTCAGTTATAGGGA+GGG | + | chr5_2:9570315-9570334 | Msa0755730:intron | 35.0% | |
! | AATCAACTGGCTCAAAAACT+TGG | - | chr5_2:9570385-9570404 | None:intergenic | 35.0% |
!! | GTTTTTGAGCCAGTTGATTA+CGG | + | chr5_2:9570386-9570405 | Msa0755730:intron | 35.0% |
!! | TTTTTGAGCCAGTTGATTAC+GGG | + | chr5_2:9570387-9570406 | Msa0755730:intron | 35.0% |
GCAAACTATCATCAATGAAC+TGG | - | chr5_2:9570622-9570641 | None:intergenic | 35.0% | |
!! | TTGATGATAGTTTGCTTGCT+TGG | + | chr5_2:9570627-9570646 | Msa0755730:CDS | 35.0% |
! | TTAGCTCCATCTCTTTTGAA+TGG | + | chr5_2:9570663-9570682 | Msa0755730:CDS | 35.0% |
AGGAGGCTAAAGATCTTTAT+TGG | + | chr5_2:9570724-9570743 | Msa0755730:CDS | 35.0% | |
TACCTGGACAAGATTGATTA+AGG | - | chr5_2:9570769-9570788 | None:intergenic | 35.0% | |
GGCACAACAAGAAGAAAATA+TGG | - | chr5_2:9570842-9570861 | None:intergenic | 35.0% | |
!!! | CCGTGCCTATTTTTTTAACT+TGG | + | chr5_2:9570860-9570879 | Msa0755730:intron | 35.0% |
! | ATTTTCCTAGTCCCAAAATG+TGG | + | chr5_2:9570911-9570930 | Msa0755730:intron | 35.0% |
!!! | TTTTTTCATAGGGATTTGCC+CGG | + | chr5_2:9571071-9571090 | Msa0755730:intron | 35.0% |
GACAATTCTAATAAAACCCC+GGG | - | chr5_2:9571092-9571111 | None:intergenic | 35.0% | |
AAAGTTTCTCGTTGTTCTGT+TGG | + | chr5_2:9571130-9571149 | Msa0755730:CDS | 35.0% | |
ATCTGCAGGTGATAATTCTA+TGG | + | chr5_2:9571164-9571183 | Msa0755730:intron | 35.0% | |
! | TTTGCTGTCCTTGATAGAAA+AGG | + | chr5_2:9571287-9571306 | Msa0755730:CDS | 35.0% |
GATGAACAGAGTCATTTATG+GGG | - | chr5_2:9571314-9571333 | None:intergenic | 35.0% | |
! | GTTGTACACAACTCAGTTTT+TGG | + | chr5_2:9571565-9571584 | Msa0755730:intron | 35.0% |
GCATCAAATGATAATTGACC+AGG | - | chr5_2:9571630-9571649 | None:intergenic | 35.0% | |
AGTTGTGAGGATAATAAGCT+AGG | - | chr5_2:9571652-9571671 | None:intergenic | 35.0% | |
TTCGAAAAAACGAAGTTGTG+AGG | - | chr5_2:9571665-9571684 | None:intergenic | 35.0% | |
TAAGATGTTGGATGGGAATT+TGG | + | chr5_2:9571919-9571938 | Msa0755730:CDS | 35.0% | |
TCGAAGTCAAAAGTTTGGTT+TGG | + | chr5_2:9571959-9571978 | Msa0755730:CDS | 35.0% | |
ATACCCAATAGAAAGTCAGT+GGG | - | chr5_2:9572007-9572026 | None:intergenic | 35.0% | |
AATACCCAATAGAAAGTCAG+TGG | - | chr5_2:9572008-9572027 | None:intergenic | 35.0% | |
AACAAGAGAATACACACTTC+AGG | - | chr5_2:9572044-9572063 | None:intergenic | 35.0% | |
GTGTGTATTCTCTTGTTCAA+TGG | + | chr5_2:9572047-9572066 | Msa0755730:intron | 35.0% | |
! | AAACAAGGCATTTGTTTCAG+AGG | + | chr5_2:9572177-9572196 | Msa0755730:CDS | 35.0% |
! | GGGTAAAAGTAGAAAAGCAT+AGG | - | chr5_2:9572205-9572224 | None:intergenic | 35.0% |
!!! | TATAAACGTACAGTTTTGGG+AGG | - | chr5_2:9572231-9572250 | None:intergenic | 35.0% |
!!! | GTTTTTTTTTCCGCTAAACG+TGG | + | chr5_2:9572322-9572341 | Msa0755730:intron | 35.0% |
AGGTAATTAACCACGTTTAG+CGG | - | chr5_2:9572335-9572354 | None:intergenic | 35.0% | |
TTACAACAATCTCTGATCAC+AGG | + | chr5_2:9572369-9572388 | Msa0755730:intron | 35.0% | |
TACAACAATCTCTGATCACA+GGG | + | chr5_2:9572370-9572389 | Msa0755730:intron | 35.0% | |
TTAAGGCCATTCCACATAAT+TGG | + | chr5_2:9572585-9572604 | Msa0755730:intron | 35.0% | |
TGATAGAAGACTTGATTAGG+AGG | + | chr5_2:9572629-9572648 | Msa0755730:intron | 35.0% | |
! | ATTAGGAGGTGTACAAAGTA+GGG | + | chr5_2:9572643-9572662 | Msa0755730:intron | 35.0% |
!! | AGCTGATTTGAAGTTGACAT+GGG | + | chr5_2:9572795-9572814 | Msa0755730:intron | 35.0% |
!! | GGTCAAAGCTTTATTTGTGT+TGG | + | chr5_2:9572834-9572853 | Msa0755730:intron | 35.0% |
!! | ACAAAACATTTTGGGTCGAA+CGG | - | chr5_2:9572994-9573013 | None:intergenic | 35.0% |
!! | CCCAAAATGTTTTGTTGATC+AGG | + | chr5_2:9572999-9573018 | Msa0755730:intron | 35.0% |
! | CCCTGATCAACAAAACATTT+TGG | - | chr5_2:9573003-9573022 | None:intergenic | 35.0% |
!! | CAAGCAGCTTTAAATGTTGA+TGG | + | chr5_2:9573084-9573103 | Msa0755730:CDS | 35.0% |
!! | AGCTTTAAATGTTGATGGCT+TGG | + | chr5_2:9573089-9573108 | Msa0755730:CDS | 35.0% |
GGTATGTTGCAAAAAGAATG+TGG | + | chr5_2:9573278-9573297 | Msa0755730:intron | 35.0% | |
ATAGTACTAAAATCAGCTGC+TGG | + | chr5_2:9573396-9573415 | Msa0755730:intron | 35.0% | |
TAGTACTAAAATCAGCTGCT+GGG | + | chr5_2:9573397-9573416 | Msa0755730:intron | 35.0% | |
! | TTCTAGGAATGTACTCTTGT+TGG | + | chr5_2:9573432-9573451 | Msa0755730:intron | 35.0% |
TCTTGTTGGATGATAACTGT+TGG | + | chr5_2:9573446-9573465 | Msa0755730:intron | 35.0% | |
AGCCATTCATCAAAAAGAAC+AGG | - | chr5_2:9573558-9573577 | None:intergenic | 35.0% | |
! | TGTTCTTTTTGATGAATGGC+TGG | + | chr5_2:9573557-9573576 | Msa0755730:intron | 35.0% |
GGTTGAAGGCTATATATTCA+CGG | - | chr5_2:9573618-9573637 | None:intergenic | 35.0% | |
! | TAGTACCAAATTGATGACCA+TGG | + | chr5_2:9573683-9573702 | Msa0755730:intron | 35.0% |
GATAAATGATTGTTGGACCA+AGG | + | chr5_2:9573852-9573871 | Msa0755730:intron | 35.0% | |
ACAAATCAGCAATTGTATGC+CGG | - | chr5_2:9574090-9574109 | None:intergenic | 35.0% | |
! | CTGATCACAGAAGTATGATA+TGG | - | chr5_2:9574191-9574210 | None:intergenic | 35.0% |
! | ACTTCTTTTATTGCAGACAC+AGG | + | chr5_2:9574396-9574415 | Msa0755730:intron | 35.0% |
! | GCTTTTCTAACAACAGACTT+CGG | - | chr5_2:9574562-9574581 | None:intergenic | 35.0% |
TACTAGGCAACGAAATTAAC+TGG | + | chr5_2:9574966-9574985 | Msa0755730:intron | 35.0% | |
TTAAATCCATGAGACAGCAT+TGG | + | chr5_2:9575379-9575398 | Msa0755730:intron | 35.0% | |
! | ACTTAGTTTGACTGTACGAA+TGG | + | chr5_2:9575496-9575515 | Msa0755730:intron | 35.0% |
TTAATTGAAGGTAACCATCG+AGG | - | chr5_2:9575644-9575663 | None:intergenic | 35.0% | |
!! | TAAATTGGCTCGCAATTTCA+TGG | + | chr5_2:9575679-9575698 | Msa0755730:CDS | 35.0% |
TTTGTTCTATTGCAGTTCTG+TGG | + | chr5_2:9575775-9575794 | Msa0755730:intron | 35.0% | |
AAGTGTGTTTCCTATTCTGA+AGG | + | chr5_2:9576078-9576097 | Msa0755730:CDS | 35.0% | |
!! | CAATTCTAAAGCGTTAGACT+TGG | + | chr5_2:9576248-9576267 | Msa0755730:CDS | 35.0% |
!!! | CTTTTGCATTTTGAGGTCTA+AGG | - | chr5_2:9576311-9576330 | None:intergenic | 35.0% |
TCAAGCATAACAAATAAGGG+AGG | - | chr5_2:9576412-9576431 | None:intergenic | 35.0% | |
GCTAAAAAGTGAATAAGCAG+AGG | + | chr5_2:9576610-9576629 | Msa0755730:intron | 35.0% | |
AACAAACAGTGAACAGATGA+AGG | - | chr5_2:9576701-9576720 | None:intergenic | 35.0% | |
GTAAAAACTTGGATAACAGG+AGG | - | chr5_2:9576871-9576890 | None:intergenic | 35.0% | |
! | ATCCAAGTTTTTACAGACGA+AGG | + | chr5_2:9576877-9576896 | Msa0755730:three_prime_UTR | 35.0% |
TACCTTCGTCTGTAAAAACT+TGG | - | chr5_2:9576882-9576901 | None:intergenic | 35.0% | |
ATGTTTCGCAGTAGGGTTTA+GGG | - | chr5_2:9568312-9568331 | None:intergenic | 40.0% | |
AAGTGTGATGTTTCGCAGTA+GGG | - | chr5_2:9568319-9568338 | None:intergenic | 40.0% | |
!!! | TTCGTTTTGGTTCAGGAAAG+AGG | - | chr5_2:9568370-9568389 | None:intergenic | 40.0% |
!!! | CTTCTTCTTCGTTTTGGTTC+AGG | - | chr5_2:9568377-9568396 | None:intergenic | 40.0% |
! | CGTGTTCTTCTTCTTCGTTT+TGG | - | chr5_2:9568383-9568402 | None:intergenic | 40.0% |
AAACGAAGAAGAAGAACACG+AGG | + | chr5_2:9568383-9568402 | Msa0755730:five_prime_UTR | 40.0% | |
GAATTGAGAAGTTAGGGTTG+GGG | - | chr5_2:9568417-9568436 | None:intergenic | 40.0% | |
TCATCGCAAAACTCTAGCAA+TGG | + | chr5_2:9568442-9568461 | Msa0755730:exon | 40.0% | |
TCTAGCAATGGCAAATTCCT+TGG | + | chr5_2:9568454-9568473 | Msa0755730:exon | 40.0% | |
AGCTTGTAATTGAGAAGCCA+AGG | - | chr5_2:9568474-9568493 | None:intergenic | 40.0% | |
AAGATAGAAGGGCGAGTAAA+CGG | - | chr5_2:9568539-9568558 | None:intergenic | 40.0% | |
GGATTCAGTACTCTTATCAG+CGG | - | chr5_2:9568579-9568598 | None:intergenic | 40.0% | |
TTGAGCAGCAATGGTGTAAA+TGG | - | chr5_2:9568600-9568619 | None:intergenic | 40.0% | |
ATTTACACCATTGCTGCTCA+AGG | + | chr5_2:9568599-9568618 | Msa0755730:CDS | 40.0% | |
GAAATTACCTTGAGCAGCAA+TGG | - | chr5_2:9568609-9568628 | None:intergenic | 40.0% | |
TGAATATTTGGCTGTGCTTC+AGG | + | chr5_2:9568718-9568737 | Msa0755730:intron | 40.0% | |
!! | TTAGCACTGATGAACGGTTT+AGG | + | chr5_2:9568755-9568774 | Msa0755730:CDS | 40.0% |
GATACATGAGCACAATGTTG+AGG | + | chr5_2:9569040-9569059 | Msa0755730:CDS | 40.0% | |
! | TCTTAAGGGTGTGAAAGACT+CGG | + | chr5_2:9569240-9569259 | Msa0755730:CDS | 40.0% |
TGCTGCACTATAACCATTCT+AGG | - | chr5_2:9569277-9569296 | None:intergenic | 40.0% | |
!!! | TTGTTGAAGTTTTGGGTGTG+AGG | + | chr5_2:9569485-9569504 | Msa0755730:CDS | 40.0% |
!!! | TGTTGAAGTTTTGGGTGTGA+GGG | + | chr5_2:9569486-9569505 | Msa0755730:CDS | 40.0% |
CTTATCCAACCATGTGGATT+TGG | - | chr5_2:9569854-9569873 | None:intergenic | 40.0% | |
CAAATCCACATGGTTGGATA+AGG | + | chr5_2:9569852-9569871 | Msa0755730:intron | 40.0% | |
!! | AAACAGTTGGTTTGTGGTCT+TGG | - | chr5_2:9570074-9570093 | None:intergenic | 40.0% |
GTACAGTGACTGATGTTCTT+TGG | - | chr5_2:9570158-9570177 | None:intergenic | 40.0% | |
! | GTAAAGCTTGGAGGTATAGT+TGG | + | chr5_2:9570266-9570285 | Msa0755730:intron | 40.0% |
TGTGAGAAGGGGAATAAAAG+AGG | + | chr5_2:9570341-9570360 | Msa0755730:intron | 40.0% | |
GGGAATAAAAGAGGTTAGAG+AGG | + | chr5_2:9570350-9570369 | Msa0755730:intron | 40.0% | |
! | TTTTGAGCCAGTTGATTACG+GGG | + | chr5_2:9570388-9570407 | Msa0755730:intron | 40.0% |
GACAATAGTTCAACAGAAGG+TGG | - | chr5_2:9570591-9570610 | None:intergenic | 40.0% | |
TGCCTTAATCAATCTTGTCC+AGG | + | chr5_2:9570764-9570783 | Msa0755730:CDS | 40.0% | |
!! | TGGAAGTGTGTCCACATTTT+GGG | - | chr5_2:9570925-9570944 | None:intergenic | 40.0% |
!! | TTGGAAGTGTGTCCACATTT+TGG | - | chr5_2:9570926-9570945 | None:intergenic | 40.0% |
GGGCAAATCCCTATGAAAAA+AGG | - | chr5_2:9571072-9571091 | None:intergenic | 40.0% | |
! | TTTTTCATAGGGATTTGCCC+GGG | + | chr5_2:9571072-9571091 | Msa0755730:intron | 40.0% |
! | TATGGGGACCTTTTCTATCA+AGG | - | chr5_2:9571298-9571317 | None:intergenic | 40.0% |
!! | CACACAAGTTGATAGGATCT+TGG | - | chr5_2:9571346-9571365 | None:intergenic | 40.0% |
TCAGCAAATGGATCTGATGA+AGG | + | chr5_2:9571485-9571504 | Msa0755730:intron | 40.0% | |
CAGCAAATGGATCTGATGAA+GGG | + | chr5_2:9571486-9571505 | Msa0755730:intron | 40.0% | |
TTAATGCAATAGTTGCAGCC+TGG | + | chr5_2:9571609-9571628 | Msa0755730:intron | 40.0% | |
! | AGCAGTTCATCGTTTTCTTC+AGG | + | chr5_2:9571756-9571775 | Msa0755730:CDS | 40.0% |
!! | GTTTGGCTTGTATCATCCAA+AGG | + | chr5_2:9571976-9571995 | Msa0755730:CDS | 40.0% |
TTCGGGCATCTTGAAAAACA+AGG | + | chr5_2:9572162-9572181 | Msa0755730:CDS | 40.0% | |
AAAAGGATAACTGTCTGGGA+AGG | - | chr5_2:9572290-9572309 | None:intergenic | 40.0% | |
! | TTCCCAGACAGTTATCCTTT+TGG | + | chr5_2:9572289-9572308 | Msa0755730:intron | 40.0% |
! | TCCCAGACAGTTATCCTTTT+GGG | + | chr5_2:9572290-9572309 | Msa0755730:intron | 40.0% |
ACCCAAAAGGATAACTGTCT+GGG | - | chr5_2:9572294-9572313 | None:intergenic | 40.0% | |
AACCCAAAAGGATAACTGTC+TGG | - | chr5_2:9572295-9572314 | None:intergenic | 40.0% | |
!! | GTTGACTAGAGAGAGTGTTA+AGG | + | chr5_2:9572568-9572587 | Msa0755730:intron | 40.0% |
! | ATTCCACATAATTGGTGGGT+GGG | + | chr5_2:9572593-9572612 | Msa0755730:intron | 40.0% |
! | GATTAGGAGGTGTACAAAGT+AGG | + | chr5_2:9572642-9572661 | Msa0755730:intron | 40.0% |
! | TTAGGAGGTGTACAAAGTAG+GGG | + | chr5_2:9572644-9572663 | Msa0755730:intron | 40.0% |
!! | GAGCTGATTTGAAGTTGACA+TGG | + | chr5_2:9572794-9572813 | Msa0755730:intron | 40.0% |
!! | GCTGATTTGAAGTTGACATG+GGG | + | chr5_2:9572796-9572815 | Msa0755730:intron | 40.0% |
GAACGGTATGGTTAAATGGT+TGG | - | chr5_2:9572977-9572996 | None:intergenic | 40.0% | |
! | TCGAGAAGTGTAGAAGAATC+TGG | - | chr5_2:9573123-9573142 | None:intergenic | 40.0% |
AGATTCTTCTACACTTCTCG+AGG | + | chr5_2:9573122-9573141 | Msa0755730:CDS | 40.0% | |
TGCAAAAAGAATGTGGTGAC+TGG | + | chr5_2:9573285-9573304 | Msa0755730:intron | 40.0% | |
TTGGATGATAACTGTTGGTG+TGG | + | chr5_2:9573451-9573470 | Msa0755730:intron | 40.0% | |
AGCTTAACTAAATTGGGCCT+TGG | - | chr5_2:9573872-9573891 | None:intergenic | 40.0% | |
TAATATATATTGGGCCTGCC+CGG | + | chr5_2:9574068-9574087 | Msa0755730:intron | 40.0% | |
CAAATCAGCAATTGTATGCC+GGG | - | chr5_2:9574089-9574108 | None:intergenic | 40.0% | |
AAGTAAGAACACGCAAAGTC+CGG | - | chr5_2:9574324-9574343 | None:intergenic | 40.0% | |
AAGATACTCGTGGTACTAGA+CGG | - | chr5_2:9574806-9574825 | None:intergenic | 40.0% | |
CCAAAACATCAAGATACTCG+TGG | - | chr5_2:9574816-9574835 | None:intergenic | 40.0% | |
! | CCACGAGTATCTTGATGTTT+TGG | + | chr5_2:9574813-9574832 | Msa0755730:intron | 40.0% |
!!! | TCTTGATGTTTTGGCTTCCA+CGG | + | chr5_2:9574822-9574841 | Msa0755730:intron | 40.0% |
! | CACTTTTCGAACAACAGACT+TGG | - | chr5_2:9575293-9575312 | None:intergenic | 40.0% |
CAGTCAAACTAAGTGATGTC+AGG | - | chr5_2:9575490-9575509 | None:intergenic | 40.0% | |
AGTGAAATGTGATTGACGAC+TGG | - | chr5_2:9575585-9575604 | None:intergenic | 40.0% | |
! | TTCCTATTCTGAAGGATGAG+TGG | + | chr5_2:9576086-9576105 | Msa0755730:CDS | 40.0% |
! | TCCTATTCTGAAGGATGAGT+GGG | + | chr5_2:9576087-9576106 | Msa0755730:CDS | 40.0% |
TGGGAATCTTTAGTGAATGC+TGG | + | chr5_2:9576106-9576125 | Msa0755730:CDS | 40.0% | |
!!! | TGCATTTTGAGGTCTAAGGT+TGG | - | chr5_2:9576307-9576326 | None:intergenic | 40.0% |
AGAATCTTCAGGCAATCTAC+TGG | + | chr5_2:9576377-9576396 | Msa0755730:CDS | 40.0% | |
CAAAAAGTCATTCGTCCAAC+AGG | - | chr5_2:9576725-9576744 | None:intergenic | 40.0% | |
GCAGGATGATAGCAAGATAA+AGG | + | chr5_2:9576751-9576770 | Msa0755730:intron | 40.0% | |
GATGTTTCGCAGTAGGGTTT+AGG | - | chr5_2:9568313-9568332 | None:intergenic | 45.0% | |
GAAGTGTGATGTTTCGCAGT+AGG | - | chr5_2:9568320-9568339 | None:intergenic | 45.0% | |
TCAGGAAAGAGGTTGAAGAG+AGG | - | chr5_2:9568359-9568378 | None:intergenic | 45.0% | |
TGCGGAATCAGTAAGTGCTA+TGG | - | chr5_2:9568504-9568523 | None:intergenic | 45.0% | |
CTCTTATCAGCGGCTTCTTT+AGG | - | chr5_2:9568569-9568588 | None:intergenic | 45.0% | |
ATTTGGCTGTGCTTCAGGAT+TGG | + | chr5_2:9568723-9568742 | Msa0755730:intron | 45.0% | |
CAGTCCCCAGAGTAAAGAAT+TGG | + | chr5_2:9568798-9568817 | Msa0755730:CDS | 45.0% | |
AATGCATGTGTGTCGTGGTA+AGG | - | chr5_2:9569086-9569105 | None:intergenic | 45.0% | |
GAACAAATGCATGTGTGTCG+TGG | - | chr5_2:9569091-9569110 | None:intergenic | 45.0% | |
! | CTTAAGGGTGTGAAAGACTC+GGG | + | chr5_2:9569241-9569260 | Msa0755730:CDS | 45.0% |
TTGCAAACCTCACGTTAGGA+AGG | + | chr5_2:9570234-9570253 | Msa0755730:intron | 45.0% | |
TCATAGACCTTCCTAACGTG+AGG | - | chr5_2:9570244-9570263 | None:intergenic | 45.0% | |
GGTTTGATACGTTCAGTTGC+CGG | + | chr5_2:9570684-9570703 | Msa0755730:CDS | 45.0% | |
GTTTGATACGTTCAGTTGCC+GGG | + | chr5_2:9570685-9570704 | Msa0755730:CDS | 45.0% | |
TTCTGTCACAGCATAGTACC+TGG | - | chr5_2:9570785-9570804 | None:intergenic | 45.0% | |
!!! | TGTGTCCACATTTTGGGACT+AGG | - | chr5_2:9570919-9570938 | None:intergenic | 45.0% |
AAAACATCCAAGGCCTTCGT+TGG | - | chr5_2:9570945-9570964 | None:intergenic | 45.0% | |
! | TTTTCATAGGGATTTGCCCG+GGG | + | chr5_2:9571073-9571092 | Msa0755730:intron | 45.0% |
TGGACTCCCTAATTATCTGC+AGG | + | chr5_2:9571150-9571169 | Msa0755730:CDS | 45.0% | |
ACCTGACATCGAAGATGTTG+AGG | - | chr5_2:9571391-9571410 | None:intergenic | 45.0% | |
TCGAATGTCAATTAGCTGGC+TGG | + | chr5_2:9571680-9571699 | Msa0755730:intron | 45.0% | |
CGAATGTCAATTAGCTGGCT+GGG | + | chr5_2:9571681-9571700 | Msa0755730:intron | 45.0% | |
!! | ACCACCCACTGACTTTCTAT+TGG | + | chr5_2:9572000-9572019 | Msa0755730:intron | 45.0% |
!! | CCACCCACTGACTTTCTATT+GGG | + | chr5_2:9572001-9572020 | Msa0755730:intron | 45.0% |
!!! | CGTACAGTTTTGGGAGGAAA+GGG | - | chr5_2:9572225-9572244 | None:intergenic | 45.0% |
!!! | ACGTACAGTTTTGGGAGGAA+AGG | - | chr5_2:9572226-9572245 | None:intergenic | 45.0% |
AGGCCATTCCACATAATTGG+TGG | + | chr5_2:9572588-9572607 | Msa0755730:intron | 45.0% | |
GGCCATTCCACATAATTGGT+GGG | + | chr5_2:9572589-9572608 | Msa0755730:intron | 45.0% | |
CACCCACCAATTATGTGGAA+TGG | - | chr5_2:9572594-9572613 | None:intergenic | 45.0% | |
CATTCCACATAATTGGTGGG+TGG | + | chr5_2:9572592-9572611 | Msa0755730:intron | 45.0% | |
! | TTCCACATAATTGGTGGGTG+GGG | + | chr5_2:9572594-9572613 | Msa0755730:intron | 45.0% |
! | TAGGAGGTGTACAAAGTAGG+GGG | + | chr5_2:9572645-9572664 | Msa0755730:intron | 45.0% |
GTGTACAAAGTAGGGGGTTA+TGG | + | chr5_2:9572651-9572670 | Msa0755730:intron | 45.0% | |
GGTCGAACGGTATGGTTAAA+TGG | - | chr5_2:9572981-9573000 | None:intergenic | 45.0% | |
!! | ACATTTTGGGTCGAACGGTA+TGG | - | chr5_2:9572989-9573008 | None:intergenic | 45.0% |
GGGTCTTACTGACATTCAAG+AGG | + | chr5_2:9573020-9573039 | Msa0755730:intron | 45.0% | |
GGGCAGGCCCAATATATATT+AGG | - | chr5_2:9574069-9574088 | None:intergenic | 45.0% | |
TGTGGCATAGCAAGGAGTAA+TGG | - | chr5_2:9574244-9574263 | None:intergenic | 45.0% | |
! | ATTACTCCTTGCTATGCCAC+AGG | + | chr5_2:9574243-9574262 | Msa0755730:CDS | 45.0% |
GTACTAGACGGGATCCTATT+CGG | - | chr5_2:9574794-9574813 | None:intergenic | 45.0% | |
AGATACTCGTGGTACTAGAC+GGG | - | chr5_2:9574805-9574824 | None:intergenic | 45.0% | |
ACTTCTCTTGTTGCAGACAC+AGG | + | chr5_2:9574922-9574941 | Msa0755730:intron | 45.0% | |
TGCAGACATCAATACCTCGA+TGG | + | chr5_2:9575627-9575646 | Msa0755730:intron | 45.0% | |
GTTCTGTGGATAAGACCAGA+AGG | + | chr5_2:9575789-9575808 | Msa0755730:intron | 45.0% | |
TCCCACTCATCCTTCAGAAT+AGG | - | chr5_2:9576091-9576110 | None:intergenic | 45.0% | |
! | GAATGCTGGTGATGTTCTCT+TGG | + | chr5_2:9576120-9576139 | Msa0755730:CDS | 45.0% |
TTCTCTTGGACGAGGTACAT+GGG | + | chr5_2:9576134-9576153 | Msa0755730:intron | 45.0% | |
CTAGTGTCAGCAGAATCTTC+AGG | + | chr5_2:9576366-9576385 | Msa0755730:CDS | 45.0% | |
! | GTTCACTGTTTGTTGCCTGT+TGG | + | chr5_2:9576707-9576726 | Msa0755730:intron | 45.0% |
! | CGCTTTTCTGCTAAGAATGG+AGG | - | chr5_2:9576833-9576852 | None:intergenic | 45.0% |
! | CTGCGCTTTTCTGCTAAGAA+TGG | - | chr5_2:9576836-9576855 | None:intergenic | 45.0% |
!! | AAAAAAATATAATCAAAATT+AGG | - | chr5_2:9572423-9572442 | None:intergenic | 5.0% |
!!! | AACTAATTTTTTTTAAAAAA+TGG | + | chr5_2:9575156-9575175 | Msa0755730:intron | 5.0% |
GTTGAAGAGAGGCAGAGGTA+GGG | - | chr5_2:9568348-9568367 | None:intergenic | 50.0% | |
AAGAGGTTGAAGAGAGGCAG+AGG | - | chr5_2:9568353-9568372 | None:intergenic | 50.0% | |
AAGTTAGGGTTGGGGTTTCG+TGG | - | chr5_2:9568409-9568428 | None:intergenic | 50.0% | |
!!! | AAACGGTCGCTTTTGAGGTG+CGG | - | chr5_2:9568522-9568541 | None:intergenic | 50.0% |
!!! | CGAGTAAACGGTCGCTTTTG+AGG | - | chr5_2:9568527-9568546 | None:intergenic | 50.0% |
TCGAGTGTTTGAAGAGCAGC+CGG | - | chr5_2:9568913-9568932 | None:intergenic | 50.0% | |
GGGTGCAACACTACCTAGAA+TGG | + | chr5_2:9569261-9569280 | Msa0755730:CDS | 50.0% | |
GTGCAGCAATGTCTTCGTGA+TGG | + | chr5_2:9569289-9569308 | Msa0755730:CDS | 50.0% | |
CAGCAATGTCTTCGTGATGG+TGG | + | chr5_2:9569292-9569311 | Msa0755730:CDS | 50.0% | |
! | CTCAGCCTTATCCAACCATG+TGG | - | chr5_2:9569860-9569879 | None:intergenic | 50.0% |
CATGGTTGGATAAGGCTGAG+TGG | + | chr5_2:9569860-9569879 | Msa0755730:intron | 50.0% | |
CTGCTTGCAAACCTCACGTT+AGG | + | chr5_2:9570230-9570249 | Msa0755730:intron | 50.0% | |
ATAGGGAGGGAGTTGTGAGA+AGG | + | chr5_2:9570328-9570347 | Msa0755730:intron | 50.0% | |
TAGGGAGGGAGTTGTGAGAA+GGG | + | chr5_2:9570329-9570348 | Msa0755730:intron | 50.0% | |
TGTGGACACACTTCCAACGA+AGG | + | chr5_2:9570929-9570948 | Msa0755730:CDS | 50.0% | |
ATGGCAACAGCGAAACTGCA+AGG | - | chr5_2:9571015-9571034 | None:intergenic | 50.0% | |
TAAGGATGAAGACTGCCAGC+AGG | + | chr5_2:9571263-9571282 | Msa0755730:CDS | 50.0% | |
GCCTCAACATCTTCGATGTC+AGG | + | chr5_2:9571387-9571406 | Msa0755730:CDS | 50.0% | |
AAGTCAGTGGGTGGTACCTT+TGG | - | chr5_2:9571995-9572014 | None:intergenic | 50.0% | |
CCCAATAGAAAGTCAGTGGG+TGG | - | chr5_2:9572004-9572023 | None:intergenic | 50.0% | |
! | TCCACATAATTGGTGGGTGG+GGG | + | chr5_2:9572595-9572614 | Msa0755730:intron | 50.0% |
AAGCTGCTGTCTGGTAAGTG+TGG | + | chr5_2:9573177-9573196 | Msa0755730:intron | 50.0% | |
CTGTTGGTGTGGTACAGTCA+TGG | + | chr5_2:9573462-9573481 | Msa0755730:intron | 50.0% | |
ATGAAGTCCAGTGCAACCTG+TGG | - | chr5_2:9574262-9574281 | None:intergenic | 50.0% | |
GACTGTAGGAATGGCCGAAT+AGG | + | chr5_2:9574777-9574796 | Msa0755730:intron | 50.0% | |
TCTTGGCCAATGCTGTCTCA+TGG | - | chr5_2:9575388-9575407 | None:intergenic | 50.0% | |
GTCAGGAAGTCCAGTAGACT+TGG | + | chr5_2:9575422-9575441 | Msa0755730:intron | 50.0% | |
! | TGGTGATGTTCTCTTGGACG+AGG | + | chr5_2:9576126-9576145 | Msa0755730:CDS | 50.0% |
GTTCTCTTGGACGAGGTACA+TGG | + | chr5_2:9576133-9576152 | Msa0755730:intron | 50.0% | |
AACTTGGATAACAGGAGGGC+AGG | - | chr5_2:9576866-9576885 | None:intergenic | 50.0% | |
AACGACGTCGTTTCGGTTGG+CGG | + | chr5_2:9568272-9568291 | Msa0755730:five_prime_UTR | 55.0% | |
GGTTGAAGAGAGGCAGAGGT+AGG | - | chr5_2:9568349-9568368 | None:intergenic | 55.0% | |
TGGCTGTGCTTCAGGATTGG+AGG | + | chr5_2:9568726-9568745 | Msa0755730:intron | 55.0% | |
AGGGAGGGAGTTGTGAGAAG+GGG | + | chr5_2:9570330-9570349 | Msa0755730:intron | 55.0% | |
GAGCCAGTTGATTACGGGGA+AGG | + | chr5_2:9570392-9570411 | Msa0755730:intron | 55.0% | |
GGTCCTTCCCCGTAATCAAC+TGG | - | chr5_2:9570398-9570417 | None:intergenic | 55.0% | |
GTTGATTACGGGGAAGGACC+TGG | + | chr5_2:9570398-9570417 | Msa0755730:intron | 55.0% | |
CTCACAAGCACGAGCAATCC+CGG | - | chr5_2:9570706-9570725 | None:intergenic | 55.0% | |
GATTGCTCGTGCTTGTGAGG+AGG | + | chr5_2:9570707-9570726 | Msa0755730:CDS | 55.0% | |
CACACTTCCAACGAAGGCCT+TGG | + | chr5_2:9570935-9570954 | Msa0755730:CDS | 55.0% | |
TCAAGGACAGCAAAGCCTGC+TGG | - | chr5_2:9571281-9571300 | None:intergenic | 55.0% | |
ACTGCTGCACCGAGTTCAGA+AGG | - | chr5_2:9571742-9571761 | None:intergenic | 55.0% | |
ACCCCCACCCACCAATTATG+TGG | - | chr5_2:9572599-9572618 | None:intergenic | 55.0% | |
TGCGTTTGCAAGCTGCTGTC+TGG | + | chr5_2:9573168-9573187 | Msa0755730:CDS | 55.0% | |
TCAGCAATTGTATGCCGGGC+AGG | - | chr5_2:9574085-9574104 | None:intergenic | 55.0% | |
GTGCAACCTGTGGCATAGCA+AGG | - | chr5_2:9574252-9574271 | None:intergenic | 55.0% | |
TGCTATGCCACAGGTTGCAC+TGG | + | chr5_2:9574252-9574271 | Msa0755730:intron | 55.0% | |
CGGGATTGCTCGTGCTTGTG+AGG | + | chr5_2:9570704-9570723 | Msa0755730:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 9568271 | 9576922 | 9568271 | ID=Msa0755730;Name=Msa0755730 |
chr5_2 | mRNA | 9568271 | 9576922 | 9568271 | ID=Msa0755730-mRNA-1;Parent=Msa0755730;Name=Msa0755730-mRNA-1;_AED=0.06;_eAED=0.06;_QI=190|0.84|0.85|1|1|1|20|96|763 |
chr5_2 | exon | 9568271 | 9568620 | 9568271 | ID=Msa0755730-mRNA-1:exon:4409;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9568740 | 9568953 | 9568740 | ID=Msa0755730-mRNA-1:exon:4410;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9569040 | 9569135 | 9569040 | ID=Msa0755730-mRNA-1:exon:4411;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9569222 | 9569342 | 9569222 | ID=Msa0755730-mRNA-1:exon:4412;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9569430 | 9569591 | 9569430 | ID=Msa0755730-mRNA-1:exon:4413;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9570618 | 9570785 | 9570618 | ID=Msa0755730-mRNA-1:exon:4414;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9570921 | 9570976 | 9570921 | ID=Msa0755730-mRNA-1:exon:4415;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9571082 | 9571171 | 9571082 | ID=Msa0755730-mRNA-1:exon:4416;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9571260 | 9571408 | 9571260 | ID=Msa0755730-mRNA-1:exon:4417;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9571695 | 9571777 | 9571695 | ID=Msa0755730-mRNA-1:exon:4418;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9571866 | 9571997 | 9571866 | ID=Msa0755730-mRNA-1:exon:4419;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9572124 | 9572198 | 9572124 | ID=Msa0755730-mRNA-1:exon:4420;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9573021 | 9573189 | 9573021 | ID=Msa0755730-mRNA-1:exon:4421;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9574164 | 9574264 | 9574164 | ID=Msa0755730-mRNA-1:exon:4422;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9574412 | 9574489 | 9574412 | ID=Msa0755730-mRNA-1:exon:4423;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9575632 | 9575725 | 9575632 | ID=Msa0755730-mRNA-1:exon:4424;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9575790 | 9575810 | 9575790 | ID=Msa0755730-mRNA-1:exon:4425;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9576050 | 9576147 | 9576050 | ID=Msa0755730-mRNA-1:exon:4426;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9576246 | 9576398 | 9576246 | ID=Msa0755730-mRNA-1:exon:4427;Parent=Msa0755730-mRNA-1 |
chr5_2 | exon | 9576755 | 9576922 | 9576755 | ID=Msa0755730-mRNA-1:exon:4428;Parent=Msa0755730-mRNA-1 |
chr5_2 | five_prime_UTR | 9568271 | 9568460 | 9568271 | ID=Msa0755730-mRNA-1:five_prime_utr;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9568461 | 9568620 | 9568461 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9568740 | 9568953 | 9568740 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9569040 | 9569135 | 9569040 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9569222 | 9569342 | 9569222 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9569430 | 9569591 | 9569430 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9570618 | 9570785 | 9570618 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9570921 | 9570976 | 9570921 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9571082 | 9571171 | 9571082 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9571260 | 9571408 | 9571260 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9571695 | 9571777 | 9571695 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9571866 | 9571997 | 9571866 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9572124 | 9572198 | 9572124 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9573021 | 9573189 | 9573021 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9574164 | 9574264 | 9574164 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9574412 | 9574489 | 9574412 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9575632 | 9575725 | 9575632 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9575790 | 9575810 | 9575790 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9576050 | 9576147 | 9576050 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9576246 | 9576398 | 9576246 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | CDS | 9576755 | 9576826 | 9576755 | ID=Msa0755730-mRNA-1:cds;Parent=Msa0755730-mRNA-1 |
chr5_2 | three_prime_UTR | 9576827 | 9576922 | 9576827 | ID=Msa0755730-mRNA-1:three_prime_utr;Parent=Msa0755730-mRNA-1 |
Gene Sequence |
Protein sequence |