Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454990 | sp|Q9C8Z4|HEAT1_ARATH | 43.337 | 953 | 464 | 17 | 1 | 886 | 1 | 944 | 0.0 | 714 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454990 | A0A396HWR9 | 85.189 | 898 | 90 | 6 | 1 | 886 | 1 | 867 | 0.0 | 1454 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1454990 | Msa1460580 | 0.832844 | 7.494755e-56 | -8.615850e-47 |
| Msa0755730 | Msa1454990 | 0.805314 | 1.417299e-49 | -8.615850e-47 |
| Msa1314210 | Msa1454990 | 0.828502 | 8.677019e-55 | -8.615850e-47 |
| Msa0408050 | Msa1454990 | 0.802127 | 6.500267e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454990 | MtrunA17_Chr5g0443891 | 85.189 | 898 | 90 | 6 | 1 | 886 | 1 | 867 | 0.0 | 1454 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454990 | AT3G06530.5 | 43.337 | 953 | 464 | 17 | 1 | 886 | 1 | 944 | 0.0 | 715 |
| Msa1454990 | AT3G06530.1 | 43.337 | 953 | 464 | 17 | 1 | 886 | 1 | 944 | 0.0 | 714 |
| Msa1454990 | AT3G06530.4 | 43.141 | 955 | 465 | 18 | 1 | 886 | 1 | 946 | 0.0 | 710 |
| Msa1454990 | AT3G06530.3 | 42.707 | 953 | 461 | 18 | 1 | 886 | 1 | 935 | 0.0 | 695 |
| Msa1454990 | AT3G06530.2 | 42.707 | 953 | 461 | 18 | 1 | 886 | 1 | 935 | 0.0 | 695 |
Find 171 sgRNAs with CRISPR-Local
Find 523 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATCACCTGCAGATAATT+AGG | 0.158360 | tig0035561:+6385 | Msa1454990:intergenic |
| AAGTTATGGTTTGCATATTT+TGG | 0.181805 | tig0035561:-1089 | Msa1454990:CDS |
| TGCTGTTGTTGTTGAAGTTT+TGG | 0.200325 | tig0035561:-8028 | Msa1454990:CDS |
| AATCCTTCAAAGAATGTAAT+TGG | 0.216676 | tig0035561:-8060 | Msa1454990:CDS |
| TAAGATGTTGGATGGGAATT+TGG | 0.221917 | tig0035561:-5624 | Msa1454990:CDS |
| TTGGAAGTGTGTCCACATTT+TGG | 0.224042 | tig0035561:+6620 | Msa1454990:intergenic |
| TTCTGTTAAGGAATGGTATA+TGG | 0.224760 | tig0035561:-8293 | Msa1454990:intron |
| CTTTACGGTTATCTGTAAAT+TGG | 0.249413 | tig0035561:-1755 | Msa1454990:CDS |
| CCGTACTTGAGATTAATTTC+TGG | 0.260119 | tig0035561:-8631 | Msa1454990:CDS |
| AGGAGGCCAAAGATCTTTAT+TGG | 0.260157 | tig0035561:-6819 | Msa1454990:CDS |
| GTTACCTTCAATTAACTTTA+CGG | 0.271083 | tig0035561:-1770 | Msa1454990:CDS |
| ATGATGAACAGAGTCATTTA+TGG | 0.277685 | tig0035561:+6229 | Msa1454990:intergenic |
| CAAGATTGATTAAGGCAATA+AGG | 0.280374 | tig0035561:+6785 | Msa1454990:intergenic |
| TATAATCATTCGCAGTTCTA+AGG | 0.285402 | tig0035561:-6297 | Msa1454990:intron |
| CTCTTATCAGCGGCTTCTTT+AGG | 0.291025 | tig0035561:+8936 | Msa1454990:intergenic |
| GATGTTTCGCAGTAGGGTTT+AGG | 0.300439 | tig0035561:+9192 | Msa1454990:intergenic |
| CGTGTTCTTCTTCTTCGTTT+TGG | 0.305162 | tig0035561:+9122 | Msa1454990:intergenic |
| GAACGAAGAATTGAGAAGTT+AGG | 0.308727 | tig0035561:+9081 | Msa1454990:intergenic |
| CCAAAGATCTTTATTGGTTT+CGG | 0.309537 | tig0035561:-6813 | Msa1454990:CDS |
| ATGTTTCGCAGTAGGGTTTA+GGG | 0.312685 | tig0035561:+9193 | Msa1454990:intergenic |
| TGGTATATGGGAGTTTCTTA+AGG | 0.315680 | tig0035561:-8280 | Msa1454990:CDS |
| GACAGTAAGACTATTATTAT+CGG | 0.323168 | tig0035561:+3291 | Msa1454990:intergenic |
| TCCTTCACTTCTTGTTCCAT+TGG | 0.324300 | tig0035561:-120 | Msa1454990:CDS |
| CAAGCAGCTTTAAATGTTGA+TGG | 0.324998 | tig0035561:-4455 | Msa1454990:CDS |
| TCACTTCTTGTTCCATTGGC+TGG | 0.333986 | tig0035561:-116 | Msa1454990:CDS |
| TTGAGCAGCGATGGTGTAAA+TGG | 0.347980 | tig0035561:+8905 | Msa1454990:intergenic |
| AACCAATCAACATTATATTC+AGG | 0.352232 | tig0035561:+1712 | Msa1454990:intergenic |
| CTGCTTGATATAAATTCTTC+GGG | 0.357022 | tig0035561:-5398 | Msa1454990:CDS |
| TTAGCACTGATGAACGGTTT+AGG | 0.363947 | tig0035561:-8750 | Msa1454990:CDS |
| ATATCTCGAAGTCAAAAGTT+TGG | 0.366769 | tig0035561:-5589 | Msa1454990:CDS |
| TGCTGCACTATAACCATTCT+AGG | 0.367211 | tig0035561:+8231 | Msa1454990:intergenic |
| TACTAGGCAACGAAATTAAC+TGG | 0.368319 | tig0035561:-2458 | Msa1454990:CDS |
| TACCTGGACAAGATTGATTA+AGG | 0.369079 | tig0035561:+6777 | Msa1454990:intergenic |
| TAAATTGGCTCGCAATTTCA+TGG | 0.369221 | tig0035561:-1740 | Msa1454990:CDS |
| CACACAAGTTGATAGGATCT+TGG | 0.372295 | tig0035561:+6199 | Msa1454990:intergenic |
| ATCATCAAACTGTCTCAATA+TGG | 0.372395 | tig0035561:+4496 | Msa1454990:intergenic |
| ACTGCTTGATATAAATTCTT+CGG | 0.376474 | tig0035561:-5399 | Msa1454990:CDS |
| CAGTCCCCAGAGTAAAGAAT+TGG | 0.381140 | tig0035561:-8707 | Msa1454990:CDS |
| TTGATGATAGTTTGCTTGCT+TGG | 0.385008 | tig0035561:-6916 | Msa1454990:CDS |
| ACCTCAAAATGCAAAAGTTA+TGG | 0.385817 | tig0035561:-1103 | Msa1454990:CDS |
| GAGAGGGAACGACGTCGTTT+CGG | 0.387540 | tig0035561:-9237 | None:intergenic |
| TCTGAAAGATACTTCTTATC+AGG | 0.389337 | tig0035561:+7943 | Msa1454990:intergenic |
| AGAATTGAGAAGTTAGGGTT+GGG | 0.392048 | tig0035561:+9087 | Msa1454990:intergenic |
| GGTTTGATACGTTCAGTTGC+CGG | 0.395567 | tig0035561:-6859 | Msa1454990:CDS |
| AAGCCAATTACATTCTTTGA+AGG | 0.395856 | tig0035561:+8057 | Msa1454990:intergenic |
| GCCCTGAATATAATGTTGAT+TGG | 0.397538 | tig0035561:-1714 | Msa1454990:CDS |
| CTCTATCCAATTCTTTACTC+TGG | 0.397972 | tig0035561:+8701 | Msa1454990:intergenic |
| TACTAGTCAAAGAAATTAAC+TGG | 0.400542 | tig0035561:-2988 | Msa1454990:CDS |
| AGGTGTTCCTGCTGCTGTCC+AGG | 0.406533 | tig0035561:-219 | Msa1454990:CDS |
| ATAGTTTCACACAAGTTGAT+AGG | 0.411967 | tig0035561:+6192 | Msa1454990:intergenic |
| AAGATAGAAGGACGAGTAAA+CGG | 0.414071 | tig0035561:+8966 | Msa1454990:intergenic |
| TCGAAGTCAAAAGTTTGGTT+TGG | 0.414254 | tig0035561:-5584 | Msa1454990:CDS |
| CCGAAACCAATAAAGATCTT+TGG | 0.415791 | tig0035561:+6813 | Msa1454990:intergenic |
| GCAGGATGATAGCAAGATAA+AGG | 0.416003 | tig0035561:-665 | Msa1454990:intron |
| AGCTTTAAATGTTGATGGCT+TGG | 0.420896 | tig0035561:-4450 | Msa1454990:CDS |
| TGGCTGTGCTTCAGGATTGG+AGG | 0.422251 | tig0035561:-8779 | Msa1454990:intron |
| AAAGTTTCTCGTTGTTCTGT+TGG | 0.425961 | tig0035561:-6412 | Msa1454990:CDS |
| TTATCACCTGCAGATAATTA+GGG | 0.429558 | tig0035561:+6386 | Msa1454990:intergenic |
| TGATGAACAGAGTCATTTAT+GGG | 0.430170 | tig0035561:+6230 | Msa1454990:intergenic |
| GGTTGAAGAGAGGCAGAGGT+AGG | 0.431356 | tig0035561:+9156 | Msa1454990:intergenic |
| AACGAAGAATTGAGAAGTTA+GGG | 0.434668 | tig0035561:+9082 | Msa1454990:intergenic |
| AACGACGTCGTTTCGGTTGG+CGG | 0.440047 | tig0035561:-9230 | Msa1454990:five_prime_UTR |
| AAGATTGATTAAGGCAATAA+GGG | 0.442710 | tig0035561:+6786 | Msa1454990:intergenic |
| GGTATATGGGAGTTTCTTAA+GGG | 0.443756 | tig0035561:-8279 | Msa1454990:CDS |
| CTGATCACGGAAGTATGATA+TGG | 0.445078 | tig0035561:+3240 | Msa1454990:intergenic |
| TCGAATGTCAATTAGCTGGC+TGG | 0.446269 | tig0035561:-5862 | Msa1454990:intron |
| TTAGGATCGAACAAGATAGA+AGG | 0.448135 | tig0035561:+8954 | None:intergenic |
| TCCATTGGCTGGTGATGATC+AGG | 0.448412 | tig0035561:-105 | None:intergenic |
| CTCACAAGCACGAGCAATCC+CGG | 0.449224 | tig0035561:+6840 | Msa1454990:intergenic |
| ACTTTAAAAGCTCTAGTACT+AGG | 0.451800 | tig0035561:-2474 | Msa1454990:CDS |
| GCAGTCTGCAACAAAATAGA+TGG | 0.457995 | tig0035561:-166 | Msa1454990:CDS |
| TCTATCCAATTCTTTACTCT+GGG | 0.461382 | tig0035561:+8702 | Msa1454990:intergenic |
| GCAAACTATCATCAATGAAC+TGG | 0.461619 | tig0035561:+6924 | Msa1454990:intergenic |
| CTAAGAAATGGAGGTGTTCA+CGG | 0.465996 | tig0035561:+593 | Msa1454990:intergenic |
| AAGAGGTTGAAGAGAGGCAG+AGG | 0.466037 | tig0035561:+9152 | Msa1454990:intergenic |
| TCTAGCAATGGCAAATTCCT+TGG | 0.469935 | tig0035561:-9048 | Msa1454990:exon |
| GGACTTATATTTAAAAGCTC+TGG | 0.471062 | tig0035561:-3011 | Msa1454990:CDS |
| CAATTCTAAAGCGTTAGACT+TGG | 0.471780 | tig0035561:-1169 | Msa1454990:CDS |
| GACTCAACATCTTCGATGTC+AGG | 0.472414 | tig0035561:-6155 | Msa1454990:intron |
| GTTTGATACGTTCAGTTGCC+GGG | 0.473503 | tig0035561:-6858 | Msa1454990:CDS |
| TGCCTTAATCAATCTTGTCC+AGG | 0.474061 | tig0035561:-6779 | Msa1454990:intron |
| TGCGTTTGCAAGCTGCTGTC+TGG | 0.475109 | tig0035561:-4371 | Msa1454990:intron |
| GAATGCTGGTGATGTTCTCT+TGG | 0.475242 | tig0035561:-1298 | Msa1454990:CDS |
| AACAAGAAGTGAAGGAAATC+CGG | 0.478163 | tig0035561:+127 | Msa1454990:intergenic |
| AAGTTAGGGTTGGGGTTTCG+TGG | 0.478751 | tig0035561:+9096 | Msa1454990:intergenic |
| GTTGAAGAGAGGCAGAGGTA+GGG | 0.483599 | tig0035561:+9157 | Msa1454990:intergenic |
| CAGAGTAAAGAATTGGATAG+AGG | 0.488546 | tig0035561:-8700 | Msa1454990:CDS |
| TCGAGAAGTGTAGAAGAATC+TGG | 0.489532 | tig0035561:+4419 | Msa1454990:intergenic |
| TGATAATATTGCTGAAGAAA+CGG | 0.490134 | tig0035561:-2957 | Msa1454990:intron |
| CACACTTCCAACGAAGGCCT+TGG | 0.491384 | tig0035561:-6608 | Msa1454990:CDS |
| ACCAATCAACATTATATTCA+GGG | 0.493379 | tig0035561:+1713 | Msa1454990:intergenic |
| CTTTCAACCTGGACAGCAGC+AGG | 0.499079 | tig0035561:+212 | Msa1454990:intergenic |
| CTAGTGTCAGCAGAATCTTC+AGG | 0.499962 | tig0035561:-1051 | Msa1454990:CDS |
| AAGTGTGATGTTTCGCAGTA+GGG | 0.501036 | tig0035561:+9186 | Msa1454990:intergenic |
| TAGATGGCAAACTGAACTCT+TGG | 0.504212 | tig0035561:-150 | Msa1454990:CDS |
| CGAATGTCAATTAGCTGGCT+GGG | 0.504864 | tig0035561:-5861 | Msa1454990:intron |
| TGCAAAGAAATGCGTACGAC+TGG | 0.507004 | tig0035561:+186 | Msa1454990:intergenic |
| TCCCACTCATCCTTCAGAAT+AGG | 0.507626 | tig0035561:+1330 | Msa1454990:intergenic |
| TCTGTTAAGGAATGGTATAT+GGG | 0.508750 | tig0035561:-8292 | Msa1454990:intron |
| ATCAAACCATTCAAAAGAGA+TGG | 0.508806 | tig0035561:+6874 | Msa1454990:intergenic |
| AACTTGGATAACAGGAGGGC+AGG | 0.509236 | tig0035561:+550 | Msa1454990:intergenic |
| TTTGCTGTCCTTGATAGAAA+AGG | 0.510636 | tig0035561:-6255 | Msa1454990:CDS |
| ACAAATTATCCTTCTGAACT+CGG | 0.515618 | tig0035561:-5812 | Msa1454990:CDS |
| GAAGTGTGATGTTTCGCAGT+AGG | 0.515692 | tig0035561:+9185 | Msa1454990:intergenic |
| TTGTTCTATTGCAGTATCTG+TGG | 0.517877 | tig0035561:-1642 | Msa1454990:CDS |
| CCAGAAATTAATCTCAAGTA+CGG | 0.520084 | tig0035561:+8631 | Msa1454990:intergenic |
| AAGAATTGAGAAGTTAGGGT+TGG | 0.522630 | tig0035561:+9086 | Msa1454990:intergenic |
| AAGGAGTAATGGATAAATCA+TGG | 0.523492 | tig0035561:+3198 | Msa1454990:intergenic |
| AGAATCTTCAGGCAATCTAC+TGG | 0.527397 | tig0035561:-1040 | Msa1454990:intron |
| TCAAGGACAGCAAAGCCTGC+TGG | 0.528595 | tig0035561:+6264 | Msa1454990:intergenic |
| TCCTATTCTGAAGGATGAGT+GGG | 0.530051 | tig0035561:-1331 | Msa1454990:CDS |
| AAACAAGGCATTTGTTTCAG+AGG | 0.532371 | tig0035561:-5366 | Msa1454990:intron |
| TTTCTCATAGGGATTTGCCC+GGG | 0.533236 | tig0035561:-6470 | Msa1454990:intron |
| ATTACTCCTTGCTATGCCAC+AGG | 0.533955 | tig0035561:-3185 | Msa1454990:intron |
| ATAACCGTAAAGTTAATTGA+AGG | 0.534221 | tig0035561:+1766 | Msa1454990:intergenic |
| GGGTGCAACACTACCTAGAA+TGG | 0.535731 | tig0035561:-8244 | Msa1454990:CDS |
| TAGTACAGATACTTAAAATA+CGG | 0.538997 | tig0035561:-8391 | Msa1454990:intron |
| GTTTGGCTTGTATCATCCAA+AGG | 0.541542 | tig0035561:-5567 | Msa1454990:intron |
| ATCAACATTATATTCAGGGC+TGG | 0.543065 | tig0035561:+1717 | Msa1454990:intergenic |
| TGAGAATATTGCTGAAGAAA+CGG | 0.546082 | tig0035561:-2427 | Msa1454990:intron |
| AAAACATCCAAGGCCTTCGT+TGG | 0.546236 | tig0035561:+6601 | Msa1454990:intergenic |
| TGAAGACCAGAATTCACAAA+AGG | 0.550489 | tig0035561:+7967 | Msa1454990:intergenic |
| CTTAAGGGTGTGAAAGACTC+GGG | 0.550885 | tig0035561:-8264 | Msa1454990:CDS |
| TGGACTCCCTAATTATCTGC+AGG | 0.551807 | tig0035561:-6392 | Msa1454990:intron |
| GGGAACGACGTCGTTTCGGT+TGG | 0.553732 | tig0035561:-9233 | Msa1454990:five_prime_UTR |
| TGGCAAACTGAACTCTTGGC+CGG | 0.555877 | tig0035561:-146 | Msa1454990:CDS |
| TGCGGAATCAGTAAGTGCTA+TGG | 0.557132 | tig0035561:+9001 | Msa1454990:intergenic |
| ACGACTGGAGACTTTCAACC+TGG | 0.558167 | tig0035561:+201 | Msa1454990:intergenic |
| TCTTAAGGGTGTGAAAGACT+CGG | 0.559147 | tig0035561:-8265 | Msa1454990:CDS |
| TAAGGATGAAGACTGCCAGC+AGG | 0.559986 | tig0035561:-6279 | Msa1454990:CDS |
| GAAATTACCTTGAGCAGCGA+TGG | 0.560001 | tig0035561:+8896 | Msa1454990:intergenic |
| TGTGGCATAGCAAGGAGTAA+TGG | 0.562119 | tig0035561:+3187 | Msa1454990:intergenic |
| GACAATTCTAATAAAACCCC+GGG | 0.565313 | tig0035561:+6453 | Msa1454990:intergenic |
| GCCAATGGAACAAGAAGTGA+AGG | 0.566862 | tig0035561:+119 | Msa1454990:intergenic |
| AAAGATTCTTTAAGAATGCA+CGG | 0.567010 | tig0035561:+1142 | Msa1454990:intergenic |
| GAATTGAGAAGTTAGGGTTG+GGG | 0.569022 | tig0035561:+9088 | Msa1454990:intergenic |
| AGCTTGTAATTGAGAAGCCA+AGG | 0.570228 | tig0035561:+9031 | Msa1454990:intergenic |
| TAGTTTCTTTAAAACATCCA+AGG | 0.571442 | tig0035561:+6591 | Msa1454990:intergenic |
| CGGGATTGCTCGTGCTTGTG+AGG | 0.575385 | tig0035561:-6839 | Msa1454990:CDS |
| GATTGCTCGTGCTTGTGAGG+AGG | 0.586819 | tig0035561:-6836 | Msa1454990:CDS |
| ATTTACACCATCGCTGCTCA+AGG | 0.587470 | tig0035561:-8903 | Msa1454990:intron |
| TTCTGATTAGCACTGATGAA+CGG | 0.587650 | tig0035561:-8756 | Msa1454990:CDS |
| TTCCTATTCTGAAGGATGAG+TGG | 0.589217 | tig0035561:-1332 | Msa1454990:CDS |
| AATGCATGTGTGTCGTGGTA+AGG | 0.591387 | tig0035561:+8422 | Msa1454990:intergenic |
| AGAGTAAAGAATTGGATAGA+GGG | 0.592118 | tig0035561:-8699 | Msa1454990:CDS |
| TGGGAATCTTTAGTGAATGC+TGG | 0.593145 | tig0035561:-1312 | Msa1454990:CDS |
| GGATTCAGTACTCTTATCAG+CGG | 0.596784 | tig0035561:+8926 | Msa1454990:intergenic |
| ACTGCTGCACCGAGTTCAGA+AGG | 0.604583 | tig0035561:+5803 | Msa1454990:intergenic |
| TCATCGCAAAACTCTAGCAA+TGG | 0.605505 | tig0035561:-9060 | Msa1454990:exon |
| TTCTCATAGGGATTTGCCCG+GGG | 0.610737 | tig0035561:-6469 | Msa1454990:intron |
| AAGTGTGTTTCCTATTCTGA+AGG | 0.612237 | tig0035561:-1340 | Msa1454990:CDS |
| ACCTGATCATCACCAGCCAA+TGG | 0.613905 | tig0035561:+104 | Msa1454990:intergenic |
| TATTCTTCAAGTACTGATCA+CGG | 0.616883 | tig0035561:+3227 | Msa1454990:intergenic |
| AGACAATTCTAATAAAACCC+CGG | 0.620522 | tig0035561:+6452 | Msa1454990:intergenic |
| GTGCAACCTGTGGCATAGCA+AGG | 0.622039 | tig0035561:+3179 | Msa1454990:intergenic |
| CAGCAATGTCTTCGTGATGG+TGG | 0.624348 | tig0035561:-8213 | Msa1454990:CDS |
| CTATCCAATTCTTTACTCTG+GGG | 0.626014 | tig0035561:+8703 | Msa1454990:intergenic |
| TGCAGACATCAATACCTCGA+TGG | 0.629029 | tig0035561:-1792 | Msa1454990:intron |
| GATACATGAGCACAATGTTG+AGG | 0.631551 | tig0035561:-8465 | Msa1454990:CDS |
| AGATTCTTCTACACTTCTCG+AGG | 0.637603 | tig0035561:-4417 | Msa1454990:CDS |
| TGTGGACACACTTCCAACGA+AGG | 0.640723 | tig0035561:-6614 | Msa1454990:CDS |
| GAAGTATCTTTCAGATCACA+AGG | 0.644408 | tig0035561:-7935 | Msa1454990:intron |
| TGGTGATGTTCTCTTGGACG+AGG | 0.644450 | tig0035561:-1292 | Msa1454990:intron |
| TATCTGTGGATAAGACCAGA+AGG | 0.653069 | tig0035561:-1628 | Msa1454990:intron |
| AAACGAAGAAGAAGAACACG+AGG | 0.654037 | tig0035561:-9119 | Msa1454990:five_prime_UTR |
| GGGTCTTACTGACATTCAAG+AGG | 0.662039 | tig0035561:-4519 | Msa1454990:CDS |
| GTGCAGCAATGTCTTCGTGA+TGG | 0.666314 | tig0035561:-8216 | Msa1454990:CDS |
| TCAGGGAAGAGGTTGAAGAG+AGG | 0.667916 | tig0035561:+9146 | Msa1454980:intergenic |
| GATGAACAGAGTCATTTATG+GGG | 0.694679 | tig0035561:+6231 | Msa1454980:intergenic |
| GAACAAATGCATGTGTGTCG+TGG | 0.697055 | tig0035561:+8417 | Msa1454980:intergenic |
| TTAATTGAAGGTAACCATCG+AGG | 0.719373 | tig0035561:+1778 | Msa1454980:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTGTTTTTATTTTTGTA+CGG | - | tig0035561:804-823 | Msa1454990:intron | 10.0% |
| !! | TTAAAATAATAATATACATG+TGG | - | tig0035561:1430-1449 | Msa1454990:intron | 10.0% |
| !! | TAAAATAATAATATACATGT+GGG | - | tig0035561:1431-1450 | Msa1454990:intron | 10.0% |
| !! | TATTACGAATTAAAAATAAA+GGG | + | tig0035561:1789-1808 | Msa1454990:intergenic | 10.0% |
| !! | CAATTACAATTATATAATAT+AGG | + | tig0035561:2329-2348 | Msa1454990:intergenic | 10.0% |
| !! | ATATACATATTAAAAACAAA+TGG | + | tig0035561:2828-2847 | Msa1454990:intergenic | 10.0% |
| !!! | TTATATTTTTTTTCTGAAAA+AGG | - | tig0035561:4227-4246 | Msa1454990:intron | 10.0% |
| !! | TTGATATAAAATAATTGAAT+TGG | + | tig0035561:5385-5404 | Msa1454990:intergenic | 10.0% |
| !! | AAATACAAATTGAAATATAT+GGG | + | tig0035561:5437-5456 | Msa1454990:intergenic | 10.0% |
| !! | AAAATACAAATTGAAATATA+TGG | + | tig0035561:5438-5457 | Msa1454990:intergenic | 10.0% |
| !! | AAACACAAATAAAATTATTT+AGG | - | tig0035561:6982-7001 | Msa1454990:intron | 10.0% |
| !!! | TTCTATAATTAACATTTTAT+GGG | - | tig0035561:9045-9064 | Msa1454990:exon | 10.0% |
| !! | CTATTACGAATTAAAAATAA+AGG | + | tig0035561:1790-1809 | Msa1454990:intergenic | 15.0% |
| !!! | GTTTTTAAACTATAAATTAG+AGG | + | tig0035561:2219-2238 | Msa1454990:intergenic | 15.0% |
| !! | ATACTTCAAAGAAATATATA+TGG | + | tig0035561:2355-2374 | Msa1454990:intergenic | 15.0% |
| !! | AAATTTAAAAAGAATGGAAA+TGG | - | tig0035561:3243-3262 | Msa1454990:CDS | 15.0% |
| !! | ATCAGTTATGTAAAATAATT+TGG | + | tig0035561:4730-4749 | Msa1454990:intergenic | 15.0% |
| !! | GTGGTATATTAAAAATAATT+TGG | - | tig0035561:4994-5013 | Msa1454990:intron | 15.0% |
| !! | TAACAAAATAAAAATTTCAG+AGG | + | tig0035561:5704-5723 | Msa1454990:intergenic | 15.0% |
| !! | AAAAACAAAACTTCAAAAAT+TGG | - | tig0035561:6630-6649 | Msa1454990:intron | 15.0% |
| !! | AAAAACAAAACTTCAAAATT+TGG | - | tig0035561:7361-7380 | Msa1454990:intron | 15.0% |
| !! | AGATCATATTTGTTTAAAAA+CGG | - | tig0035561:7812-7831 | Msa1454990:intron | 15.0% |
| !!! | GTTCTATAATTAACATTTTA+TGG | - | tig0035561:9044-9063 | Msa1454990:CDS | 15.0% |
| !! | CTGAATATGAATTGAATATT+TGG | - | tig0035561:538-557 | Msa1454990:CDS | 20.0% |
| !!! | TTCTGGATATTTTAATCTTT+CGG | - | tig0035561:723-742 | Msa1454990:intron | 20.0% |
| !! | TAGTACAGATACTTAAAATA+CGG | - | tig0035561:946-965 | Msa1454990:intron | 20.0% |
| !!! | TTATTGTTTGTTACTTTCTT+TGG | - | tig0035561:980-999 | Msa1454990:intron | 20.0% |
| !! | ATAGAATCATAAGTTTAAAG+TGG | + | tig0035561:2012-2031 | Msa1454990:intergenic | 20.0% |
| !! | TTAAATACATGTTCAGTTAT+AGG | - | tig0035561:2105-2124 | Msa1454990:intron | 20.0% |
| !! | TAAATACATGTTCAGTTATA+GGG | - | tig0035561:2106-2125 | Msa1454990:intron | 20.0% |
| !! | TATAGCCAAGTTAAAAAAAT+AGG | + | tig0035561:2662-2681 | Msa1454990:intergenic | 20.0% |
| !! | TGAGAGAAATTTAAAAAGAA+TGG | - | tig0035561:3237-3256 | Msa1454990:CDS | 20.0% |
| !! | ATTGCATTAACTAAATAGTT+TGG | + | tig0035561:3394-3413 | Msa1454990:intergenic | 20.0% |
| !!! | TAAGATTTTATGTAAGATGT+TGG | - | tig0035561:3701-3720 | Msa1454990:intron | 20.0% |
| !!! | ATTCTTATTTGATATGTTGT+AGG | - | tig0035561:3896-3915 | Msa1454990:intron | 20.0% |
| !!! | TTGTAAAGTATCAACAATAT+AGG | + | tig0035561:4151-4170 | Msa1454990:intergenic | 20.0% |
| !! | ATGTAACATTTAAACAAAAG+AGG | + | tig0035561:5034-5053 | Msa1454990:intergenic | 20.0% |
| !!! | TTAACTGTAAAATCTAAGAT+GGG | + | tig0035561:5519-5538 | Msa1454990:intergenic | 20.0% |
| !! | ATTAACTGTAAAATCTAAGA+TGG | + | tig0035561:5520-5539 | Msa1454990:intergenic | 20.0% |
| !! | TTACAGTTAATTATAAAGAG+AGG | - | tig0035561:5529-5548 | Msa1454990:intron | 20.0% |
| !!! | CTAAATCAAATTCTAAAATG+AGG | + | tig0035561:5843-5862 | Msa1454990:intergenic | 20.0% |
| !!! | CTCATTTTAGAATTTGATTT+AGG | - | tig0035561:5841-5860 | Msa1454990:CDS | 20.0% |
| !! | ATTTAGGCCTAATATATATT+GGG | - | tig0035561:5857-5876 | Msa1454990:intron | 20.0% |
| !!! | TTTTTCAAATAATCTTATGC+AGG | - | tig0035561:5907-5926 | Msa1454990:intron | 20.0% |
| !! | ATTTAGGCCTAATATATATT+GGG | - | tig0035561:5857-5876 | Msa1454990:intron | 20.0% |
| !!! | TTTTTCAAATAATCTTATGC+AGG | - | tig0035561:5907-5926 | Msa1454990:intron | 20.0% |
| !! | AAGAAAGATTTAACATATTC+CGG | - | tig0035561:6211-6230 | Msa1454990:CDS | 20.0% |
| !! | TAATCAATATATGACAAACT+TGG | + | tig0035561:6496-6515 | Msa1454990:intergenic | 20.0% |
| !!! | TGCCTAAATTTTTTACATTT+GGG | - | tig0035561:7109-7128 | Msa1454990:intron | 20.0% |
| !! | AACCCAAATGTAAAAAATTT+AGG | + | tig0035561:7114-7133 | Msa1454990:intergenic | 20.0% |
| !! | AATGCAAAAATATTACAAAC+TGG | + | tig0035561:6424-6443 | Msa1454990:intergenic | 20.0% |
| !!! | TAACTTTTCAAATAAGACTT+CGG | + | tig0035561:7268-7287 | Msa1454990:intergenic | 20.0% |
| !! | GATCATATTTGTTTAAAAAC+GGG | - | tig0035561:7813-7832 | Msa1454990:intron | 20.0% |
| !! | ATCATATTTGTTTAAAAACG+GGG | - | tig0035561:7814-7833 | Msa1454990:intron | 20.0% |
| !!! | ATTTCTCTTATTTTTTCACT+TGG | - | tig0035561:8100-8119 | Msa1454990:intron | 20.0% |
| !! | AATTCAAGCTTAACAAATAA+GGG | + | tig0035561:8335-8354 | Msa1454990:intergenic | 20.0% |
| !! | CAAAAAAGAATTCCAAAATA+AGG | + | tig0035561:8383-8402 | Msa1454990:intergenic | 20.0% |
| ! | TCAAGTAAGCTTATGAAAAA+TGG | + | tig0035561:487-506 | Msa1454990:intergenic | 25.0% |
| !!! | TTTGATTTGTTATGTGTTTC+AGG | - | tig0035561:850-869 | Msa1454990:intron | 25.0% |
| ! | ATGGTTTCTGATGTATTTAT+TGG | - | tig0035561:1020-1039 | Msa1454990:intron | 25.0% |
| ! | TGGTTTCTGATGTATTTATT+GGG | - | tig0035561:1021-1040 | Msa1454990:intron | 25.0% |
| !!! | ATAACTATGTTTTTTGTCAC+AGG | - | tig0035561:1240-1259 | Msa1454990:intron | 25.0% |
| !!! | TACATTCTTTGAAGGATTTT+TGG | + | tig0035561:1275-1294 | Msa1454990:intergenic | 25.0% |
| ! | AATCCTTCAAAGAATGTAAT+TGG | - | tig0035561:1277-1296 | Msa1454990:intron | 25.0% |
| ! | ACTTCTTAACAAAAAGGTTT+AGG | + | tig0035561:1520-1539 | Msa1454990:intergenic | 25.0% |
| ! | AATAGCACTTCTTAACAAAA+AGG | + | tig0035561:1526-1545 | Msa1454990:intergenic | 25.0% |
| ! | AAGTCATTAAACTCTGTAAT+AGG | - | tig0035561:1635-1654 | Msa1454990:CDS | 25.0% |
| !!! | TCTGTAAAATTTTGCTATGA+AGG | - | tig0035561:1738-1757 | Msa1454990:CDS | 25.0% |
| ! | GGGTAACAATAAATAATGTA+AGG | + | tig0035561:1769-1788 | Msa1454990:intergenic | 25.0% |
| ! | TCAATTTCAAATATGGAGAA+TGG | + | tig0035561:1847-1866 | Msa1454990:intergenic | 25.0% |
| !! | ATTCTCCATATTTGAAATTG+AGG | - | tig0035561:1846-1865 | Msa1454990:intron | 25.0% |
| ! | GTATTCTTCATTATTCATTC+AGG | - | tig0035561:2251-2270 | Msa1454990:intron | 25.0% |
| !!! | TTTCAGATGTTACGTTTTTT+TGG | - | tig0035561:2300-2319 | Msa1454990:intron | 25.0% |
| ! | AAGATTGATTAAGGCAATAA+GGG | + | tig0035561:2554-2573 | Msa1454990:intergenic | 25.0% |
| !!! | TAGTTTCTTTAAAACATCCA+AGG | + | tig0035561:2749-2768 | Msa1454990:intergenic | 25.0% |
| !!! | TGGATGTTTTAAAGAAACTA+AGG | - | tig0035561:2749-2768 | Msa1454990:intron | 25.0% |
| !! | TTATGAATCCTTTTTCTCAT+AGG | - | tig0035561:2855-2874 | Msa1454990:intron | 25.0% |
| !! | TATGAATCCTTTTTCTCATA+GGG | - | tig0035561:2856-2875 | Msa1454990:intron | 25.0% |
| !!! | GGTTTTATTAGAATTGTCTA+AGG | - | tig0035561:2889-2908 | Msa1454990:intron | 25.0% |
| !! | TAATTCTATGGTTTTCTTTC+TGG | - | tig0035561:2971-2990 | Msa1454990:CDS | 25.0% |
| !! | ATTTTATGTAAGATGTTGGA+TGG | - | tig0035561:3705-3724 | Msa1454990:intron | 25.0% |
| !! | TTTTATGTAAGATGTTGGAT+GGG | - | tig0035561:3706-3725 | Msa1454990:intron | 25.0% |
| ! | ATATCAAATAAGAATGAAGC+TGG | + | tig0035561:3891-3910 | Msa1454990:intergenic | 25.0% |
| ! | ACTGCTTGATATAAATTCTT+CGG | - | tig0035561:3938-3957 | Msa1454990:intron | 25.0% |
| !! | TAGTATAAACGTACAGTTTT+GGG | + | tig0035561:4028-4047 | Msa1454990:intergenic | 25.0% |
| !! | TTAGTATAAACGTACAGTTT+TGG | + | tig0035561:4029-4048 | Msa1454990:intergenic | 25.0% |
| ! | AAAACTAATATCAACCCAAA+AGG | + | tig0035561:4101-4120 | Msa1454990:intergenic | 25.0% |
| ! | CAGTTTGACAGTAAAAAAAA+TGG | + | tig0035561:4259-4278 | Msa1454990:intergenic | 25.0% |
| !!! | CATTTTTTTTACTGTCAAAC+TGG | - | tig0035561:4257-4276 | Msa1454990:intron | 25.0% |
| ! | TCAGTTCAAATCATTTGAAA+TGG | + | tig0035561:4317-4336 | Msa1454990:intergenic | 25.0% |
| !! | TTTTGATAGAAGACTTGATT+AGG | - | tig0035561:4423-4442 | Msa1454990:CDS | 25.0% |
| !!! | TTTTTCAAAACTTCGAACAA+AGG | + | tig0035561:4477-4496 | Msa1454990:intergenic | 25.0% |
| !! | GGTGATTTAAAATATGGAAT+AGG | + | tig0035561:4754-4773 | Msa1454990:intergenic | 25.0% |
| !!! | ATGGTTGGTGATTTAAAATA+TGG | + | tig0035561:4760-4779 | Msa1454990:intergenic | 25.0% |
| ! | AAAGCGCAAACAAATATATT+TGG | - | tig0035561:5055-5074 | Msa1454990:intron | 25.0% |
| !!! | TGGGAATATGTTATTTTTCT+TGG | - | tig0035561:5214-5233 | Msa1454990:intron | 25.0% |
| !! | AATTGAAATATATGGGTTGA+AGG | + | tig0035561:5430-5449 | Msa1454990:intergenic | 25.0% |
| !! | ATGGGTTTAATTTAAAACCA+TGG | + | tig0035561:5501-5520 | Msa1454990:intergenic | 25.0% |
| !! | AGCAGCATAATAAATTTTAG+AGG | + | tig0035561:5617-5636 | Msa1454990:intergenic | 25.0% |
| ! | GATTTAGGCCTAATATATAT+TGG | - | tig0035561:5856-5875 | Msa1454990:intron | 25.0% |
| ! | GACAGTAAGACTATTATTAT+CGG | + | tig0035561:5938-5957 | Msa1454990:intergenic | 25.0% |
| !! | ACTGTCAAAGAATTTGATTT+AGG | - | tig0035561:5952-5971 | Msa1454990:intron | 25.0% |
| ! | GATTTAGGCCTAATATATAT+TGG | - | tig0035561:5856-5875 | Msa1454990:intron | 25.0% |
| ! | GACAGTAAGACTATTATTAT+CGG | + | tig0035561:5938-5957 | Msa1454990:intergenic | 25.0% |
| ! | TACTAGTCAAAGAAATTAAC+TGG | - | tig0035561:6349-6368 | Msa1454990:intron | 25.0% |
| ! | TGATAATATTGCTGAAGAAA+CGG | - | tig0035561:6380-6399 | Msa1454990:intron | 25.0% |
| ! | TCAAATTGATGAGATAGTAT+CGG | - | tig0035561:6563-6582 | Msa1454990:intron | 25.0% |
| !!! | TTTGTTTTTTCAAAGTCTAC+TGG | + | tig0035561:6619-6638 | Msa1454990:intergenic | 25.0% |
| !!! | GTGCCTAAATTTTTTACATT+TGG | - | tig0035561:7108-7127 | Msa1454990:intron | 25.0% |
| !!! | TTTGTTTTTTCTAAGTCTAC+TGG | + | tig0035561:7350-7369 | Msa1454990:intergenic | 25.0% |
| ! | GTTACCTTCAATTAACTTTA+CGG | - | tig0035561:7567-7586 | Msa1454990:intron | 25.0% |
| ! | ATAACCGTAAAGTTAATTGA+AGG | + | tig0035561:7574-7593 | Msa1454990:intergenic | 25.0% |
| ! | ACCAATCAACATTATATTCA+GGG | + | tig0035561:7627-7646 | Msa1454990:intergenic | 25.0% |
| ! | AACCAATCAACATTATATTC+AGG | + | tig0035561:7628-7647 | Msa1454990:intergenic | 25.0% |
| !! | TATTCGATTTGAGGAAAAAT+GGG | + | tig0035561:7761-7780 | Msa1454990:intergenic | 25.0% |
| ! | TTATCACCTTTGATCAAAAT+AGG | + | tig0035561:7956-7975 | Msa1454990:intergenic | 25.0% |
| !!! | ATTTTGATCAAAGGTGATAA+TGG | - | tig0035561:7956-7975 | Msa1454990:CDS | 25.0% |
| !!! | TAACCTTCTTTTGTTTGTTT+TGG | - | tig0035561:8131-8150 | Msa1454990:intron | 25.0% |
| ! | ATTCCAAAACAAACAAAAGA+AGG | + | tig0035561:8137-8156 | Msa1454990:intergenic | 25.0% |
| !! | AAAGATTCTTTAAGAATGCA+CGG | + | tig0035561:8198-8217 | Msa1454990:intergenic | 25.0% |
| !!! | AAGTTATGGTTTGCATATTT+TGG | - | tig0035561:8248-8267 | Msa1454990:CDS | 25.0% |
| ! | GAATTCAAGCTTAACAAATA+AGG | + | tig0035561:8336-8355 | Msa1454990:intergenic | 25.0% |
| !!! | TTAACTCTGTTTCCTTATTT+TGG | - | tig0035561:8368-8387 | Msa1454990:intron | 25.0% |
| !!! | GGAATTCTTTTTTGTCTTAT+TGG | - | tig0035561:8389-8408 | Msa1454990:intron | 25.0% |
| ! | AAGTGCAGTATGATATTAAT+AGG | + | tig0035561:8454-8473 | Msa1454990:intergenic | 25.0% |
| ! | ATTAATATCATACTGCACTT+AGG | - | tig0035561:8454-8473 | Msa1454990:CDS | 25.0% |
| !! | TGTTGGATATTTTATTGTGT+AGG | - | tig0035561:9098-9117 | Msa1454990:five_prime_UTR | 25.0% |
| AACGAAGAATTGAGAAGTTA+GGG | + | tig0035561:258-277 | Msa1454990:intergenic | 30.0% | |
| TCTATCCAATTCTTTACTCT+GGG | + | tig0035561:638-657 | Msa1454990:intergenic | 30.0% | |
| AGAGTAAAGAATTGGATAGA+GGG | - | tig0035561:638-657 | Msa1454990:CDS | 30.0% | |
| CCAGAAATTAATCTCAAGTA+CGG | + | tig0035561:709-728 | Msa1454990:intergenic | 30.0% | |
| ATACAAGTGAGAACTCTATT+TGG | - | tig0035561:780-799 | Msa1454990:intron | 30.0% | |
| GTATTTATTGGGTTCTGTTA+AGG | - | tig0035561:1032-1051 | Msa1454990:intron | 30.0% | |
| TTCTGTTAAGGAATGGTATA+TGG | - | tig0035561:1044-1063 | Msa1454990:CDS | 30.0% | |
| TCTGTTAAGGAATGGTATAT+GGG | - | tig0035561:1045-1064 | Msa1454990:CDS | 30.0% | |
| !! | TTCTTTGAAGGATTTTTGGA+TGG | + | tig0035561:1271-1290 | Msa1454990:intergenic | 30.0% |
| AAGCCAATTACATTCTTTGA+AGG | + | tig0035561:1283-1302 | Msa1454990:intergenic | 30.0% | |
| ! | ATACATCCTTTTGTGAATTC+TGG | - | tig0035561:1364-1383 | Msa1454990:CDS | 30.0% |
| TCTGAAAGATACTTCTTATC+AGG | + | tig0035561:1397-1416 | Msa1454990:intergenic | 30.0% | |
| ! | ATAAGTCTTGTAGCATAAGT+TGG | - | tig0035561:1494-1513 | Msa1454990:intron | 30.0% |
| AATAACCAAATCCACATAGT+TGG | - | tig0035561:1678-1697 | Msa1454990:CDS | 30.0% | |
| TTCCTCCTCAATTTCAAATA+TGG | + | tig0035561:1854-1873 | Msa1454990:intergenic | 30.0% | |
| TTCTCAAACACACATGTTTA+AGG | - | tig0035561:1924-1943 | Msa1454990:intron | 30.0% | |
| !! | ATATCTATCACCTTGCTTTT+TGG | - | tig0035561:2030-2049 | Msa1454990:intron | 30.0% |
| GAAATTTAGTCCAAAAAGCA+AGG | + | tig0035561:2043-2062 | Msa1454990:intergenic | 30.0% | |
| TAAACTATAAATTAGAGGCC+AGG | + | tig0035561:2214-2233 | Msa1454990:intergenic | 30.0% | |
| ACAGAATCTAAACACAAGAT+TGG | + | tig0035561:2281-2300 | Msa1454990:intergenic | 30.0% | |
| AATGACAATAGTTCAACAGA+AGG | + | tig0035561:2388-2407 | Msa1454990:intergenic | 30.0% | |
| ! | TGTTGAACTATTGTCATTTC+AGG | - | tig0035561:2390-2409 | Msa1454990:intron | 30.0% |
| ATCAAACCATTCAAAAGAGA+TGG | + | tig0035561:2466-2485 | Msa1454990:intergenic | 30.0% | |
| !! | CCAAAGATCTTTATTGGTTT+CGG | - | tig0035561:2524-2543 | Msa1454990:intron | 30.0% |
| CAAGATTGATTAAGGCAATA+AGG | + | tig0035561:2555-2574 | Msa1454990:intergenic | 30.0% | |
| GTCAATACGATTAATCAAAC+AGG | + | tig0035561:2614-2633 | Msa1454990:intergenic | 30.0% | |
| CCAAGTTAAAAAAATAGGCA+CGG | + | tig0035561:2657-2676 | Msa1454990:intergenic | 30.0% | |
| AGACAATTCTAATAAAACCC+CGG | + | tig0035561:2888-2907 | Msa1454990:intergenic | 30.0% | |
| TTATCACCTGCAGATAATTA+GGG | + | tig0035561:2954-2973 | Msa1454990:intergenic | 30.0% | |
| ATTATCACCTGCAGATAATT+AGG | + | tig0035561:2955-2974 | Msa1454990:intergenic | 30.0% | |
| TATAATCATTCGCAGTTCTA+AGG | - | tig0035561:3040-3059 | Msa1454990:intron | 30.0% | |
| TGATGAACAGAGTCATTTAT+GGG | + | tig0035561:3110-3129 | Msa1454990:intergenic | 30.0% | |
| ATGATGAACAGAGTCATTTA+TGG | + | tig0035561:3111-3130 | Msa1454990:intergenic | 30.0% | |
| !! | ATAGTTTCACACAAGTTGAT+AGG | + | tig0035561:3148-3167 | Msa1454990:intergenic | 30.0% |
| GTGAAACTATCAGAAAAAGT+TGG | - | tig0035561:3158-3177 | Msa1454990:intron | 30.0% | |
| TTCTGTATTCAATCAGCAAA+TGG | - | tig0035561:3268-3287 | Msa1454990:CDS | 30.0% | |
| AAAAACTGAGTTGTGTACAA+CGG | + | tig0035561:3361-3380 | Msa1454990:intergenic | 30.0% | |
| !! | TTTTTCGAATGTCAATTAGC+TGG | - | tig0035561:3471-3490 | Msa1454990:intron | 30.0% |
| ACAAATTATCCTTCTGAACT+CGG | - | tig0035561:3525-3544 | Msa1454990:intron | 30.0% | |
| ATATCTCGAAGTCAAAAGTT+TGG | - | tig0035561:3748-3767 | Msa1454990:intron | 30.0% | |
| CTGCTTGATATAAATTCTTC+GGG | - | tig0035561:3939-3958 | Msa1454990:intron | 30.0% | |
| !!! | TTTTTTTTTTCCGCTAAACG+TGG | - | tig0035561:4118-4137 | Msa1454990:intron | 30.0% |
| TTTACAACAATCTCTGATCA+CGG | - | tig0035561:4164-4183 | Msa1454990:intron | 30.0% | |
| TGAAATGGAACTCAACATAT+AGG | + | tig0035561:4302-4321 | Msa1454990:intergenic | 30.0% | |
| ATGGGGTAATCTTCATAAAT+TGG | - | tig0035561:4611-4630 | Msa1454990:intron | 30.0% | |
| !! | GTCAAAGCTTTATTTGTGTT+GGG | - | tig0035561:4633-4652 | Msa1454990:intron | 30.0% |
| ATCATCAAACTGTCTCAATA+TGG | + | tig0035561:4844-4863 | Msa1454990:intergenic | 30.0% | |
| ! | ACAGTACATTTATCGATTGT+TGG | - | tig0035561:5157-5176 | Msa1454990:intron | 30.0% |
| ! | TTCCTGTTCTTTTTGATGAA+TGG | - | tig0035561:5351-5370 | Msa1454990:intron | 30.0% |
| TAAAACCATGGTCATCAATT+TGG | + | tig0035561:5489-5508 | Msa1454990:intergenic | 30.0% | |
| TTGCTGAGATAAATGATTGT+TGG | - | tig0035561:5643-5662 | Msa1454990:CDS | 30.0% | |
| AGAGAGAGCTTAACTAAATT+GGG | + | tig0035561:5676-5695 | Msa1454990:intergenic | 30.0% | |
| AAGAGAGAGCTTAACTAAAT+TGG | + | tig0035561:5677-5696 | Msa1454990:intergenic | 30.0% | |
| TATTCCCTAACAAAACTCAA+AGG | - | tig0035561:5725-5744 | Msa1454990:intron | 30.0% | |
| !!! | ACTTCCTTTGAGTTTTGTTA+GGG | + | tig0035561:5732-5751 | Msa1454990:intergenic | 30.0% |
| !!! | AACTTCCTTTGAGTTTTGTT+AGG | + | tig0035561:5733-5752 | Msa1454990:intergenic | 30.0% |
| !! | TATTCTTCAAGTACTGATCA+CGG | + | tig0035561:6113-6132 | Msa1454990:intergenic | 30.0% |
| !! | AAGGAGTAATGGATAAATCA+TGG | + | tig0035561:6142-6161 | Msa1454990:intergenic | 30.0% |
| TTCAGATTTATGCTTTGTCT+TGG | - | tig0035561:6263-6282 | Msa1454990:CDS | 30.0% | |
| CAATAAAAGAAGTAATCGTC+AGG | + | tig0035561:6298-6317 | Msa1454990:intergenic | 30.0% | |
| GGACTTATATTTAAAAGCTC+TGG | - | tig0035561:6326-6345 | Msa1454990:intron | 30.0% | |
| ! | ACTTTTTGAACAACAGACAT+TGG | + | tig0035561:6535-6554 | Msa1454990:intergenic | 30.0% |
| ! | GACTGATTCTATATTCATCT+CGG | + | tig0035561:6589-6608 | Msa1454990:intergenic | 30.0% |
| AGTCAAACTTATAGTATGTC+AGG | + | tig0035561:6674-6693 | Msa1454990:intergenic | 30.0% | |
| CATACTATAAGTTTGACTGT+AGG | - | tig0035561:6676-6695 | Msa1454990:intron | 30.0% | |
| TATAAGTTTGACTGTAGGAA+TGG | - | tig0035561:6681-6700 | Msa1454990:intron | 30.0% | |
| ATTAACAATTTAGAAGTCCG+TGG | + | tig0035561:6755-6774 | Msa1454990:intergenic | 30.0% | |
| CATTGAAATGTAATGATGAC+TGG | + | tig0035561:6783-6802 | Msa1454990:intergenic | 30.0% | |
| CAGTCATCATTACATTTCAA+TGG | - | tig0035561:6781-6800 | Msa1454990:CDS | 30.0% | |
| ! | ATTACATTTCAATGGACTTC+TGG | - | tig0035561:6789-6808 | Msa1454990:CDS | 30.0% |
| AGAAGTAAACGTCAAGATAA+TGG | + | tig0035561:6821-6840 | Msa1454990:intergenic | 30.0% | |
| ! | ACTTTAAAAGCTCTAGTACT+AGG | - | tig0035561:6863-6882 | Msa1454990:CDS | 30.0% |
| TGAGAATATTGCTGAAGAAA+CGG | - | tig0035561:6910-6929 | Msa1454990:CDS | 30.0% | |
| AGAAACGGTAAATAACTACA+TGG | - | tig0035561:6925-6944 | Msa1454990:CDS | 30.0% | |
| GAAACGGTAAATAACTACAT+GGG | - | tig0035561:6926-6945 | Msa1454990:CDS | 30.0% | |
| AACTGGAGAAATACTTACAT+AGG | + | tig0035561:7141-7160 | Msa1454990:intergenic | 30.0% | |
| ! | GACTGATTCTATATTCATCT+TGG | + | tig0035561:6589-6608 | Msa1454990:intergenic | 30.0% |
| AGATGAATATAGAATCAGTC+AGG | - | tig0035561:6589-6608 | Msa1454990:CDS | 30.0% | |
| CAAGATACTAGTGTACTATT+CGG | + | tig0035561:7440-7459 | Msa1454990:intergenic | 30.0% | |
| ! | ACACTAGTATCTTGATGTTT+TGG | - | tig0035561:7446-7465 | Msa1454990:intron | 30.0% |
| ATGAACAATTTAGAAGTTCG+TGG | + | tig0035561:7475-7494 | Msa1454990:intergenic | 30.0% | |
| CTTTACGGTTATCTGTAAAT+TGG | - | tig0035561:7582-7601 | Msa1454990:intron | 30.0% | |
| CAAAAACAAAACAAACCTTC+TGG | + | tig0035561:7727-7746 | Msa1454990:intergenic | 30.0% | |
| ! | CTATTCGATTTGAGGAAAAA+TGG | + | tig0035561:7762-7781 | Msa1454990:intergenic | 30.0% |
| ! | GTTATCTACTATTCGATTTG+AGG | + | tig0035561:7770-7789 | Msa1454990:intergenic | 30.0% |
| !!! | TGACTTCCTATTTTGATCAA+AGG | - | tig0035561:7947-7966 | Msa1454990:CDS | 30.0% |
| ACCTCAAAATGCAAAAGTTA+TGG | - | tig0035561:8234-8253 | Msa1454990:CDS | 30.0% | |
| ! | ACCATAACTTTTGCATTTTG+AGG | + | tig0035561:8238-8257 | Msa1454990:intergenic | 30.0% |
| !! | TTATGGTTTGCATATTTTGG+AGG | - | tig0035561:8251-8270 | Msa1454990:CDS | 30.0% |
| ! | AATGACTTTTTGCAATATGC+AGG | - | tig0035561:8654-8673 | Msa1454990:CDS | 30.0% |
| AAAAAACTTGGATAACAGGA+GGG | + | tig0035561:8794-8813 | Msa1454990:intergenic | 30.0% | |
| TAAAAAACTTGGATAACAGG+AGG | + | tig0035561:8795-8814 | Msa1454990:intergenic | 30.0% | |
| CTGTAAAAAACTTGGATAAC+AGG | + | tig0035561:8798-8817 | Msa1454990:intergenic | 30.0% | |
| TGAGATCTTGACATTTACAA+AGG | + | tig0035561:8935-8954 | Msa1454990:intergenic | 30.0% | |
| !!! | TTCTTCTTCGTTTTGGTTCA+GGG | + | tig0035561:211-230 | Msa1454990:intergenic | 35.0% |
| AGAATTGAGAAGTTAGGGTT+GGG | + | tig0035561:253-272 | Msa1454990:intergenic | 35.0% | |
| AAGAATTGAGAAGTTAGGGT+TGG | + | tig0035561:254-273 | Msa1454990:intergenic | 35.0% | |
| GAACGAAGAATTGAGAAGTT+AGG | + | tig0035561:259-278 | Msa1454990:intergenic | 35.0% | |
| AAGATAGAAGGACGAGTAAA+CGG | + | tig0035561:374-393 | Msa1454990:intergenic | 35.0% | |
| TTAGGATCGAACAAGATAGA+AGG | + | tig0035561:386-405 | Msa1454990:intergenic | 35.0% | |
| !! | TTCTGATTAGCACTGATGAA+CGG | - | tig0035561:581-600 | Msa1454990:CDS | 35.0% |
| CTATCCAATTCTTTACTCTG+GGG | + | tig0035561:637-656 | Msa1454990:intergenic | 35.0% | |
| CTCTATCCAATTCTTTACTC+TGG | + | tig0035561:639-658 | Msa1454990:intergenic | 35.0% | |
| CAGAGTAAAGAATTGGATAG+AGG | - | tig0035561:637-656 | Msa1454990:CDS | 35.0% | |
| CCGTACTTGAGATTAATTTC+TGG | - | tig0035561:706-725 | Msa1454990:intron | 35.0% | |
| TATTGGGTTCTGTTAAGGAA+TGG | - | tig0035561:1037-1056 | Msa1454990:intron | 35.0% | |
| TGGTATATGGGAGTTTCTTA+AGG | - | tig0035561:1057-1076 | Msa1454990:CDS | 35.0% | |
| GGTATATGGGAGTTTCTTAA+GGG | - | tig0035561:1058-1077 | Msa1454990:CDS | 35.0% | |
| AAATTCACAGCTAAACACTC+GGG | + | tig0035561:1191-1210 | Msa1454990:intergenic | 35.0% | |
| CAAATTCACAGCTAAACACT+CGG | + | tig0035561:1192-1211 | Msa1454990:intergenic | 35.0% | |
| !! | TGCTGTTGTTGTTGAAGTTT+TGG | - | tig0035561:1309-1328 | Msa1454990:CDS | 35.0% |
| !! | GCTGTTGTTGTTGAAGTTTT+GGG | - | tig0035561:1310-1329 | Msa1454990:CDS | 35.0% |
| TGAAGACCAGAATTCACAAA+AGG | + | tig0035561:1373-1392 | Msa1454990:intergenic | 35.0% | |
| ! | GAAGTATCTTTCAGATCACA+AGG | - | tig0035561:1402-1421 | Msa1454990:intron | 35.0% |
| CTTATCCAACTATGTGGATT+TGG | + | tig0035561:1686-1705 | Msa1454990:intergenic | 35.0% | |
| CAAATCCACATAGTTGGATA+AGG | - | tig0035561:1684-1703 | Msa1454990:CDS | 35.0% | |
| ! | CTCCATATTTGAAATTGAGG+AGG | - | tig0035561:1849-1868 | Msa1454990:intron | 35.0% |
| !! | TTTGAGAAACAGTTGGTTTG+TGG | + | tig0035561:1912-1931 | Msa1454990:intergenic | 35.0% |
| ATGTGTGTTTGAGAAACAGT+TGG | + | tig0035561:1919-1938 | Msa1454990:intergenic | 35.0% | |
| ATGTTCTTTGGTCTATTCGA+CGG | + | tig0035561:1978-1997 | Msa1454990:intergenic | 35.0% | |
| ATACATGTTCAGTTATAGGG+AGG | - | tig0035561:2109-2128 | Msa1454990:intron | 35.0% | |
| TACATGTTCAGTTATAGGGA+GGG | - | tig0035561:2110-2129 | Msa1454990:intron | 35.0% | |
| TGTGAAAAGGGGAATAAAAG+AGG | - | tig0035561:2136-2155 | Msa1454990:intron | 35.0% | |
| ! | AATCAACTGGCTCAAAAACT+TGG | + | tig0035561:2180-2199 | Msa1454990:intergenic | 35.0% |
| !! | GTTTTTGAGCCAGTTGATTA+CGG | - | tig0035561:2181-2200 | Msa1454990:intron | 35.0% |
| !! | TTTTTGAGCCAGTTGATTAC+GGG | - | tig0035561:2182-2201 | Msa1454990:intron | 35.0% |
| GCAAACTATCATCAATGAAC+TGG | + | tig0035561:2416-2435 | Msa1454990:intergenic | 35.0% | |
| !! | TTGATGATAGTTTGCTTGCT+TGG | - | tig0035561:2421-2440 | Msa1454990:intron | 35.0% |
| ! | TTAGCTCCATCTCTTTTGAA+TGG | - | tig0035561:2457-2476 | Msa1454990:CDS | 35.0% |
| CCGAAACCAATAAAGATCTT+TGG | + | tig0035561:2527-2546 | Msa1454990:intergenic | 35.0% | |
| TACCTGGACAAGATTGATTA+AGG | + | tig0035561:2563-2582 | Msa1454990:intergenic | 35.0% | |
| GGCACAACAAGAAGAAAATA+TGG | + | tig0035561:2636-2655 | Msa1454990:intergenic | 35.0% | |
| !!! | CCGTGCCTATTTTTTTAACT+TGG | - | tig0035561:2654-2673 | Msa1454990:intron | 35.0% |
| ! | ATTTTCCTAGTCCCAAAATG+TGG | - | tig0035561:2705-2724 | Msa1454990:intron | 35.0% |
| GACAATTCTAATAAAACCCC+GGG | + | tig0035561:2887-2906 | Msa1454990:intergenic | 35.0% | |
| AAAGTTTCTCGTTGTTCTGT+TGG | - | tig0035561:2925-2944 | Msa1454990:intron | 35.0% | |
| ATCTGCAGGTGATAATTCTA+TGG | - | tig0035561:2959-2978 | Msa1454990:CDS | 35.0% | |
| ! | TTTGCTGTCCTTGATAGAAA+AGG | - | tig0035561:3082-3101 | Msa1454990:intron | 35.0% |
| GATGAACAGAGTCATTTATG+GGG | + | tig0035561:3109-3128 | Msa1454990:intergenic | 35.0% | |
| ! | GTTGTACACAACTCAGTTTT+TGG | - | tig0035561:3360-3379 | Msa1454990:intron | 35.0% |
| GCATCAAATGATAATTGACC+AGG | + | tig0035561:3425-3444 | Msa1454990:intergenic | 35.0% | |
| AGTTGTGAGGATAATAAGCT+AGG | + | tig0035561:3447-3466 | Msa1454990:intergenic | 35.0% | |
| TTCGAAAAAACGAAGTTGTG+AGG | + | tig0035561:3460-3479 | Msa1454990:intergenic | 35.0% | |
| TAAGATGTTGGATGGGAATT+TGG | - | tig0035561:3713-3732 | Msa1454990:intron | 35.0% | |
| TCGAAGTCAAAAGTTTGGTT+TGG | - | tig0035561:3753-3772 | Msa1454990:intron | 35.0% | |
| ATACCCAATAGAAAGTCAGT+GGG | + | tig0035561:3801-3820 | Msa1454990:intergenic | 35.0% | |
| AATACCCAATAGAAAGTCAG+TGG | + | tig0035561:3802-3821 | Msa1454990:intergenic | 35.0% | |
| ! | AAACAAGGCATTTGTTTCAG+AGG | - | tig0035561:3971-3990 | Msa1454990:intron | 35.0% |
| ! | GGGTAAAAGTAGAAAAGCAT+AGG | + | tig0035561:3999-4018 | Msa1454990:intergenic | 35.0% |
| !!! | TATAAACGTACAGTTTTGGG+AGG | + | tig0035561:4025-4044 | Msa1454990:intergenic | 35.0% |
| AGGTAATTAACCACGTTTAG+CGG | + | tig0035561:4131-4150 | Msa1454990:intergenic | 35.0% | |
| TTACAACAATCTCTGATCAC+GGG | - | tig0035561:4165-4184 | Msa1454990:intron | 35.0% | |
| TTAAGGCCATTCCACATAAT+TGG | - | tig0035561:4381-4400 | Msa1454990:CDS | 35.0% | |
| TGATAGAAGACTTGATTAGG+AGG | - | tig0035561:4426-4445 | Msa1454990:CDS | 35.0% | |
| ! | ATTAGGAGGTGTACAAAGTA+GGG | - | tig0035561:4440-4459 | Msa1454990:CDS | 35.0% |
| !! | AGCTGATTTGAAGTTGACAT+GGG | - | tig0035561:4593-4612 | Msa1454990:intron | 35.0% |
| !! | GGTCAAAGCTTTATTTGTGT+TGG | - | tig0035561:4632-4651 | Msa1454990:intron | 35.0% |
| !! | CAAGCAGCTTTAAATGTTGA+TGG | - | tig0035561:4882-4901 | Msa1454990:intron | 35.0% |
| !! | AGCTTTAAATGTTGATGGCT+TGG | - | tig0035561:4887-4906 | Msa1454990:intron | 35.0% |
| GGTATGTTGCAAAAAGAATG+TGG | - | tig0035561:5076-5095 | Msa1454990:intron | 35.0% | |
| ATAGTACTAAAATCAGCTGC+TGG | - | tig0035561:5194-5213 | Msa1454990:intron | 35.0% | |
| TAGTACTAAAATCAGCTGCT+GGG | - | tig0035561:5195-5214 | Msa1454990:intron | 35.0% | |
| TTCTTGGAATGTACTCTTGT+TGG | - | tig0035561:5230-5249 | Msa1454990:intron | 35.0% | |
| TCTTGTTGGATGATAACTGT+TGG | - | tig0035561:5244-5263 | Msa1454990:intron | 35.0% | |
| AGCCATTCATCAAAAAGAAC+AGG | + | tig0035561:5356-5375 | Msa1454990:intergenic | 35.0% | |
| ! | TGTTCTTTTTGATGAATGGC+TGG | - | tig0035561:5355-5374 | Msa1454990:intron | 35.0% |
| ! | TAGTACCAAATTGATGACCA+TGG | - | tig0035561:5481-5500 | Msa1454990:intron | 35.0% |
| AGGTAGTGCTTTCATTAGAA+TGG | - | tig0035561:5549-5568 | Msa1454990:intron | 35.0% | |
| GATAAATGATTGTTGGACCA+AGG | - | tig0035561:5650-5669 | Msa1454990:CDS | 35.0% | |
| ACAAATCAGCAATTGTATGC+CGG | + | tig0035561:5888-5907 | Msa1454990:intergenic | 35.0% | |
| ACAAATCAGCAATTGTATGC+CGG | + | tig0035561:5888-5907 | Msa1454990:intergenic | 35.0% | |
| ! | ACTTCTTTTATTGCAGACAC+AGG | - | tig0035561:6305-6324 | Msa1454990:intron | 35.0% |
| AGAAACGGTAAGTAACTACA+TGG | - | tig0035561:6395-6414 | Msa1454990:CDS | 35.0% | |
| GAAACGGTAAGTAACTACAT+GGG | - | tig0035561:6396-6415 | Msa1454990:CDS | 35.0% | |
| ! | GCTTTTCTAACAACAGACTT+CGG | + | tig0035561:6474-6493 | Msa1454990:intergenic | 35.0% |
| TACTAGGCAACGAAATTAAC+TGG | - | tig0035561:6879-6898 | Msa1454990:CDS | 35.0% | |
| TTAAATCCATGAGACAGCAT+TGG | - | tig0035561:7294-7313 | Msa1454990:intron | 35.0% | |
| ! | ACTTAGTTTGACTGTACGAA+TGG | - | tig0035561:7414-7433 | Msa1454990:intron | 35.0% |
| TTAATTGAAGGTAACCATCG+AGG | + | tig0035561:7562-7581 | Msa1454990:intergenic | 35.0% | |
| !! | TAAATTGGCTCGCAATTTCA+TGG | - | tig0035561:7597-7616 | Msa1454990:intron | 35.0% |
| ATCAACATTATATTCAGGGC+TGG | + | tig0035561:7623-7642 | Msa1454990:intergenic | 35.0% | |
| GCCCTGAATATAATGTTGAT+TGG | - | tig0035561:7623-7642 | Msa1454990:intron | 35.0% | |
| TTGTTCTATTGCAGTATCTG+TGG | - | tig0035561:7695-7714 | Msa1454990:intron | 35.0% | |
| AAGTGTGTTTCCTATTCTGA+AGG | - | tig0035561:7997-8016 | Msa1454990:CDS | 35.0% | |
| !! | CAATTCTAAAGCGTTAGACT+TGG | - | tig0035561:8168-8187 | Msa1454990:intron | 35.0% |
| !!! | CTTTTGCATTTTGAGGTCTA+AGG | + | tig0035561:8231-8250 | Msa1454990:intergenic | 35.0% |
| TCAAGCTTAACAAATAAGGG+AGG | + | tig0035561:8332-8351 | Msa1454990:intergenic | 35.0% | |
| GCTAAAAAGTGAATAAGCAG+AGG | - | tig0035561:8530-8549 | Msa1454990:intron | 35.0% | |
| AACAAACAGTGAACAGATGA+AGG | + | tig0035561:8621-8640 | Msa1454990:intergenic | 35.0% | |
| AAAAAGTCATTCGTCCAAAC+AGG | + | tig0035561:8645-8664 | Msa1454990:intergenic | 35.0% | |
| !!! | TCCAAGTTTTTTACAGACGA+AGG | - | tig0035561:8802-8821 | Msa1454990:intron | 35.0% |
| ACCTTCGTCTGTAAAAAACT+TGG | + | tig0035561:8806-8825 | Msa1454990:intergenic | 35.0% | |
| ATGCACCCCATATCTTAAAT+GGG | - | tig0035561:8852-8871 | Msa1454990:intron | 35.0% | |
| ! | TGGTGTCCCATTTAAGATAT+GGG | + | tig0035561:8861-8880 | Msa1454990:intergenic | 35.0% |
| ! | TTATGTTGCTCTTCTTTTCC+AGG | - | tig0035561:9012-9031 | Msa1454990:CDS | 35.0% |
| TTATAGAACACAACATCACC+TGG | + | tig0035561:9033-9052 | Msa1454990:intergenic | 35.0% | |
| !! | ACATTGGCTTGATTCTTTGT+TGG | - | tig0035561:9081-9100 | Msa1454990:five_prime_UTR | 35.0% |
| AACAAGAAGTGAAGGAAATC+CGG | + | tig0035561:9213-9232 | Msa1454990:intergenic | 35.0% | |
| ATGTTTCGCAGTAGGGTTTA+GGG | + | tig0035561:147-166 | Msa1454990:intergenic | 40.0% | |
| AAGTGTGATGTTTCGCAGTA+GGG | + | tig0035561:154-173 | Msa1454990:intergenic | 40.0% | |
| !!! | CTTCTTCTTCGTTTTGGTTC+AGG | + | tig0035561:212-231 | Msa1454990:intergenic | 40.0% |
| ! | CGTGTTCTTCTTCTTCGTTT+TGG | + | tig0035561:218-237 | Msa1454990:intergenic | 40.0% |
| AAACGAAGAAGAAGAACACG+AGG | - | tig0035561:218-237 | Msa1454990:CDS | 40.0% | |
| GAATTGAGAAGTTAGGGTTG+GGG | + | tig0035561:252-271 | Msa1454990:intergenic | 40.0% | |
| TCATCGCAAAACTCTAGCAA+TGG | - | tig0035561:277-296 | Msa1454990:intron | 40.0% | |
| TCTAGCAATGGCAAATTCCT+TGG | - | tig0035561:289-308 | Msa1454990:intron | 40.0% | |
| AGCTTGTAATTGAGAAGCCA+AGG | + | tig0035561:309-328 | Msa1454990:intergenic | 40.0% | |
| GGATTCAGTACTCTTATCAG+CGG | + | tig0035561:414-433 | Msa1454990:intergenic | 40.0% | |
| TGAATATTTGGCTGTGCTTC+AGG | - | tig0035561:550-569 | Msa1454990:CDS | 40.0% | |
| !! | TTAGCACTGATGAACGGTTT+AGG | - | tig0035561:587-606 | Msa1454990:CDS | 40.0% |
| GATACATGAGCACAATGTTG+AGG | - | tig0035561:872-891 | Msa1454990:intron | 40.0% | |
| GGTTGTGTCGTGAATTGTAA+TGG | - | tig0035561:1001-1020 | Msa1454990:intron | 40.0% | |
| ! | TCTTAAGGGTGTGAAAGACT+CGG | - | tig0035561:1072-1091 | Msa1454990:CDS | 40.0% |
| TGCTGCACTATAACCATTCT+AGG | + | tig0035561:1109-1128 | Msa1454990:intergenic | 40.0% | |
| !!! | TTGTTGAAGTTTTGGGTGTG+AGG | - | tig0035561:1317-1336 | Msa1454990:CDS | 40.0% |
| !!! | TGTTGAAGTTTTGGGTGTGA+GGG | - | tig0035561:1318-1337 | Msa1454990:CDS | 40.0% |
| !! | AAACAGTTGGTTTGTGGTCT+TGG | + | tig0035561:1906-1925 | Msa1454990:intergenic | 40.0% |
| TGTTCTTTGGTCTATTCGAC+GGG | + | tig0035561:1977-1996 | Msa1454990:intergenic | 40.0% | |
| GTACAGTGACTGATGTTCTT+TGG | + | tig0035561:1990-2009 | Msa1454990:intergenic | 40.0% | |
| GGGAATAAAAGAGGTTAGAG+AGG | - | tig0035561:2145-2164 | Msa1454990:intron | 40.0% | |
| ! | TTTTGAGCCAGTTGATTACG+GGG | - | tig0035561:2183-2202 | Msa1454990:intron | 40.0% |
| GACAATAGTTCAACAGAAGG+TGG | + | tig0035561:2385-2404 | Msa1454990:intergenic | 40.0% | |
| AGGAGGCCAAAGATCTTTAT+TGG | - | tig0035561:2518-2537 | Msa1454990:intron | 40.0% | |
| TGCCTTAATCAATCTTGTCC+AGG | - | tig0035561:2558-2577 | Msa1454990:intron | 40.0% | |
| !! | TGGAAGTGTGTCCACATTTT+GGG | + | tig0035561:2719-2738 | Msa1454990:intergenic | 40.0% |
| !! | TTGGAAGTGTGTCCACATTT+TGG | + | tig0035561:2720-2739 | Msa1454990:intergenic | 40.0% |
| GGCAAATCCCTATGAGAAAA+AGG | + | tig0035561:2866-2885 | Msa1454990:intergenic | 40.0% | |
| ! | TTTTCTCATAGGGATTTGCC+CGG | - | tig0035561:2866-2885 | Msa1454990:intron | 40.0% |
| ! | TATGGGGACCTTTTCTATCA+AGG | + | tig0035561:3093-3112 | Msa1454990:intergenic | 40.0% |
| !! | CACACAAGTTGATAGGATCT+TGG | + | tig0035561:3141-3160 | Msa1454990:intergenic | 40.0% |
| TCAGCAAATGGATCTGATGA+AGG | - | tig0035561:3280-3299 | Msa1454990:CDS | 40.0% | |
| CAGCAAATGGATCTGATGAA+GGG | - | tig0035561:3281-3300 | Msa1454990:CDS | 40.0% | |
| TTAATGCAATAGTTGCAGCC+TGG | - | tig0035561:3404-3423 | Msa1454990:intron | 40.0% | |
| ! | AGCAGTTCATCGTTTTCTTC+AGG | - | tig0035561:3551-3570 | Msa1454990:intron | 40.0% |
| !! | GTTTGGCTTGTATCATCCAA+AGG | - | tig0035561:3770-3789 | Msa1454990:intron | 40.0% |
| AACAAGAGAATGCACACTTC+AGG | + | tig0035561:3838-3857 | Msa1454990:intergenic | 40.0% | |
| GTGTGCATTCTCTTGTTCAA+TGG | - | tig0035561:3841-3860 | Msa1454990:intron | 40.0% | |
| TTCGGGCATCTTGAAAAACA+AGG | - | tig0035561:3956-3975 | Msa1454990:intron | 40.0% | |
| AAAAGGATAACTGTCTGGGA+AGG | + | tig0035561:4084-4103 | Msa1454990:intergenic | 40.0% | |
| ! | TTCCCAGACAGTTATCCTTT+TGG | - | tig0035561:4083-4102 | Msa1454990:intron | 40.0% |
| ! | TCCCAGACAGTTATCCTTTT+GGG | - | tig0035561:4084-4103 | Msa1454990:intron | 40.0% |
| ACCCAAAAGGATAACTGTCT+GGG | + | tig0035561:4088-4107 | Msa1454990:intergenic | 40.0% | |
| AACCCAAAAGGATAACTGTC+TGG | + | tig0035561:4089-4108 | Msa1454990:intergenic | 40.0% | |
| TACAACAATCTCTGATCACG+GGG | - | tig0035561:4166-4185 | Msa1454990:intron | 40.0% | |
| !! | GTTGACTAGAGAGAGTGTTA+AGG | - | tig0035561:4364-4383 | Msa1454990:intron | 40.0% |
| AACCCACCAATTATGTGGAA+TGG | + | tig0035561:4390-4409 | Msa1454990:intergenic | 40.0% | |
| ! | ATTCCACATAATTGGTGGGT+TGG | - | tig0035561:4389-4408 | Msa1454990:CDS | 40.0% |
| !! | TTCCACATAATTGGTGGGTT+GGG | - | tig0035561:4390-4409 | Msa1454990:CDS | 40.0% |
| ! | GATTAGGAGGTGTACAAAGT+AGG | - | tig0035561:4439-4458 | Msa1454990:CDS | 40.0% |
| ! | TTAGGAGGTGTACAAAGTAG+GGG | - | tig0035561:4441-4460 | Msa1454990:CDS | 40.0% |
| !! | GAGCTGATTTGAAGTTGACA+TGG | - | tig0035561:4592-4611 | Msa1454990:intron | 40.0% |
| !! | GCTGATTTGAAGTTGACATG+GGG | - | tig0035561:4594-4613 | Msa1454990:intron | 40.0% |
| GAACGGTATGGTTAAATGGT+TGG | + | tig0035561:4775-4794 | Msa1454990:intergenic | 40.0% | |
| ! | TCGAGAAGTGTAGAAGAATC+TGG | + | tig0035561:4921-4940 | Msa1454990:intergenic | 40.0% |
| AGATTCTTCTACACTTCTCG+AGG | - | tig0035561:4920-4939 | Msa1454990:intron | 40.0% | |
| TGCAAAAAGAATGTGGTGAC+TGG | - | tig0035561:5083-5102 | Msa1454990:intron | 40.0% | |
| TTGGATGATAACTGTTGGTG+TGG | - | tig0035561:5249-5268 | Msa1454990:intron | 40.0% | |
| GGTTGAAGGCTGTATATTCA+CGG | + | tig0035561:5416-5435 | Msa1454990:intergenic | 40.0% | |
| AGCTTAACTAAATTGGGCCT+TGG | + | tig0035561:5670-5689 | Msa1454990:intergenic | 40.0% | |
| TAATATATATTGGGCCTGCC+CGG | - | tig0035561:5866-5885 | Msa1454990:intron | 40.0% | |
| CAAATCAGCAATTGTATGCC+GGG | + | tig0035561:5887-5906 | Msa1454990:intergenic | 40.0% | |
| TAATATATATTGGGCCTGCC+CGG | - | tig0035561:5866-5885 | Msa1454990:intron | 40.0% | |
| CAAATCAGCAATTGTATGCC+GGG | + | tig0035561:5887-5906 | Msa1454990:intergenic | 40.0% | |
| ! | CTGATCACGGAAGTATGATA+TGG | + | tig0035561:6100-6119 | Msa1454990:intergenic | 40.0% |
| AAGTAAGAACACGCAAAGTC+CGG | + | tig0035561:6233-6252 | Msa1454990:intergenic | 40.0% | |
| AAGATACTCGTGGTACTAGA+CGG | + | tig0035561:6719-6738 | Msa1454990:intergenic | 40.0% | |
| CCAAAACATCAAGATACTCG+TGG | + | tig0035561:6729-6748 | Msa1454990:intergenic | 40.0% | |
| ! | CCACGAGTATCTTGATGTTT+TGG | - | tig0035561:6726-6745 | Msa1454990:intron | 40.0% |
| !!! | TCTTGATGTTTTGGCTTCCA+CGG | - | tig0035561:6735-6754 | Msa1454990:intron | 40.0% |
| CAGTCAAACTAAGTGATGTC+AGG | + | tig0035561:7408-7427 | Msa1454990:intergenic | 40.0% | |
| AGTGAAATGTGATTGACGAC+TGG | + | tig0035561:7503-7522 | Msa1454990:intergenic | 40.0% | |
| TATCTGTGGATAAGACCAGA+AGG | - | tig0035561:7709-7728 | Msa1454990:intron | 40.0% | |
| ! | TTCCTATTCTGAAGGATGAG+TGG | - | tig0035561:8005-8024 | Msa1454990:CDS | 40.0% |
| ! | TCCTATTCTGAAGGATGAGT+GGG | - | tig0035561:8006-8025 | Msa1454990:CDS | 40.0% |
| TGGGAATCTTTAGTGAATGC+TGG | - | tig0035561:8025-8044 | Msa1454990:CDS | 40.0% | |
| !!! | TGCATTTTGAGGTCTAAGGT+TGG | + | tig0035561:8227-8246 | Msa1454990:intergenic | 40.0% |
| AGAATCTTCAGGCAATCTAC+TGG | - | tig0035561:8297-8316 | Msa1454990:intron | 40.0% | |
| ! | TTCACTGTTTGTTGCCTGTT+TGG | - | tig0035561:8628-8647 | Msa1454990:CDS | 40.0% |
| GCAGGATGATAGCAAGATAA+AGG | - | tig0035561:8672-8691 | Msa1454990:CDS | 40.0% | |
| !! | CTAAGAAATGGAGGTGTTCA+CGG | + | tig0035561:8747-8766 | Msa1454990:intergenic | 40.0% |
| ! | GCTTTTCTGCTAAGAAATGG+AGG | + | tig0035561:8756-8775 | Msa1454990:intergenic | 40.0% |
| ! | TGCGCTTTTCTGCTAAGAAA+TGG | + | tig0035561:8759-8778 | Msa1454990:intergenic | 40.0% |
| GATGCACCCCATATCTTAAA+TGG | - | tig0035561:8851-8870 | Msa1454990:intron | 40.0% | |
| ! | GGTGTCCCATTTAAGATATG+GGG | + | tig0035561:8860-8879 | Msa1454990:intergenic | 40.0% |
| ! | GTGGTGTCCCATTTAAGATA+TGG | + | tig0035561:8862-8881 | Msa1454990:intergenic | 40.0% |
| GCAGTCTGCAACAAAATAGA+TGG | - | tig0035561:9171-9190 | Msa1454990:five_prime_UTR | 40.0% | |
| TAGATGGCAAACTGAACTCT+TGG | - | tig0035561:9187-9206 | Msa1454990:five_prime_UTR | 40.0% | |
| TCCTTCACTTCTTGTTCCAT+TGG | - | tig0035561:9217-9236 | Msa1454990:five_prime_UTR | 40.0% | |
| GATGTTTCGCAGTAGGGTTT+AGG | + | tig0035561:148-167 | Msa1454990:intergenic | 45.0% | |
| GAAGTGTGATGTTTCGCAGT+AGG | + | tig0035561:155-174 | Msa1454990:intergenic | 45.0% | |
| !!! | TTCGTTTTGGTTCAGGGAAG+AGG | + | tig0035561:205-224 | Msa1454990:intergenic | 45.0% |
| TGCGGAATCAGTAAGTGCTA+TGG | + | tig0035561:339-358 | Msa1454990:intergenic | 45.0% | |
| CTCTTATCAGCGGCTTCTTT+AGG | + | tig0035561:404-423 | Msa1454990:intergenic | 45.0% | |
| TTGAGCAGCGATGGTGTAAA+TGG | + | tig0035561:435-454 | Msa1454990:intergenic | 45.0% | |
| ATTTACACCATCGCTGCTCA+AGG | - | tig0035561:434-453 | Msa1454990:intron | 45.0% | |
| GAAATTACCTTGAGCAGCGA+TGG | + | tig0035561:444-463 | Msa1454990:intergenic | 45.0% | |
| ATTTGGCTGTGCTTCAGGAT+TGG | - | tig0035561:555-574 | Msa1454990:CDS | 45.0% | |
| CAGTCCCCAGAGTAAAGAAT+TGG | - | tig0035561:630-649 | Msa1454990:CDS | 45.0% | |
| AATGCATGTGTGTCGTGGTA+AGG | + | tig0035561:918-937 | Msa1454990:intergenic | 45.0% | |
| GAACAAATGCATGTGTGTCG+TGG | + | tig0035561:923-942 | Msa1454990:intergenic | 45.0% | |
| ! | CTTAAGGGTGTGAAAGACTC+GGG | - | tig0035561:1073-1092 | Msa1454990:CDS | 45.0% |
| ! | CTCAGCCTTATCCAACTATG+TGG | + | tig0035561:1692-1711 | Msa1454990:intergenic | 45.0% |
| CATAGTTGGATAAGGCTGAG+TGG | - | tig0035561:1692-1711 | Msa1454990:CDS | 45.0% | |
| TTGCAAACCTCACGTTAGGA+AGG | - | tig0035561:2066-2085 | Msa1454990:intron | 45.0% | |
| TTACAGTCCTTCCTAACGTG+AGG | + | tig0035561:2076-2095 | Msa1454990:intergenic | 45.0% | |
| ATAGGGAGGGAGTTGTGAAA+AGG | - | tig0035561:2123-2142 | Msa1454990:intron | 45.0% | |
| TAGGGAGGGAGTTGTGAAAA+GGG | - | tig0035561:2124-2143 | Msa1454990:intron | 45.0% | |
| GGTTTGATACGTTCAGTTGC+CGG | - | tig0035561:2478-2497 | Msa1454990:CDS | 45.0% | |
| GTTTGATACGTTCAGTTGCC+GGG | - | tig0035561:2479-2498 | Msa1454990:CDS | 45.0% | |
| TTCTGTCACAGCATAGTACC+TGG | + | tig0035561:2579-2598 | Msa1454990:intergenic | 45.0% | |
| !!! | TGTGTCCACATTTTGGGACT+AGG | + | tig0035561:2713-2732 | Msa1454990:intergenic | 45.0% |
| AAAACATCCAAGGCCTTCGT+TGG | + | tig0035561:2739-2758 | Msa1454990:intergenic | 45.0% | |
| TTTCTCATAGGGATTTGCCC+GGG | - | tig0035561:2867-2886 | Msa1454990:intron | 45.0% | |
| TGGACTCCCTAATTATCTGC+AGG | - | tig0035561:2945-2964 | Msa1454990:intron | 45.0% | |
| GACTCAACATCTTCGATGTC+AGG | - | tig0035561:3182-3201 | Msa1454990:intron | 45.0% | |
| TCGAATGTCAATTAGCTGGC+TGG | - | tig0035561:3475-3494 | Msa1454990:intron | 45.0% | |
| CGAATGTCAATTAGCTGGCT+GGG | - | tig0035561:3476-3495 | Msa1454990:intron | 45.0% | |
| !! | ACCACCCACTGACTTTCTAT+TGG | - | tig0035561:3794-3813 | Msa1454990:intron | 45.0% |
| !! | CCACCCACTGACTTTCTATT+GGG | - | tig0035561:3795-3814 | Msa1454990:intron | 45.0% |
| !!! | CGTACAGTTTTGGGAGGAAA+GGG | + | tig0035561:4019-4038 | Msa1454990:intergenic | 45.0% |
| !!! | ACGTACAGTTTTGGGAGGAA+AGG | + | tig0035561:4020-4039 | Msa1454990:intergenic | 45.0% |
| AGGCCATTCCACATAATTGG+TGG | - | tig0035561:4384-4403 | Msa1454990:CDS | 45.0% | |
| GGCCATTCCACATAATTGGT+GGG | - | tig0035561:4385-4404 | Msa1454990:CDS | 45.0% | |
| !! | TCCACATAATTGGTGGGTTG+GGG | - | tig0035561:4391-4410 | Msa1454990:CDS | 45.0% |
| ! | TAGGAGGTGTACAAAGTAGG+GGG | - | tig0035561:4442-4461 | Msa1454990:CDS | 45.0% |
| GTGTACAAAGTAGGGGGTTA+TGG | - | tig0035561:4448-4467 | Msa1454990:CDS | 45.0% | |
| GGTCGAACGGTATGGTTAAA+TGG | + | tig0035561:4779-4798 | Msa1454990:intergenic | 45.0% | |
| GGGTCTTACTGACATTCAAG+AGG | - | tig0035561:4818-4837 | Msa1454990:intron | 45.0% | |
| GGGCAGGCCCAATATATATT+AGG | + | tig0035561:5867-5886 | Msa1454990:intergenic | 45.0% | |
| GGGCAGGCCCAATATATATT+AGG | + | tig0035561:5867-5886 | Msa1454990:intergenic | 45.0% | |
| TGTGGCATAGCAAGGAGTAA+TGG | + | tig0035561:6153-6172 | Msa1454990:intergenic | 45.0% | |
| ! | ATTACTCCTTGCTATGCCAC+AGG | - | tig0035561:6152-6171 | Msa1454990:intron | 45.0% |
| GTACTAGACGGGATCCTATT+CGG | + | tig0035561:6707-6726 | Msa1454990:intergenic | 45.0% | |
| AGATACTCGTGGTACTAGAC+GGG | + | tig0035561:6718-6737 | Msa1454990:intergenic | 45.0% | |
| TGCAGACATCAATACCTCGA+TGG | - | tig0035561:7545-7564 | Msa1454990:intron | 45.0% | |
| TCCCACTCATCCTTCAGAAT+AGG | + | tig0035561:8010-8029 | Msa1454990:intergenic | 45.0% | |
| ! | GAATGCTGGTGATGTTCTCT+TGG | - | tig0035561:8039-8058 | Msa1454990:CDS | 45.0% |
| TTCTCTTGGACGAGGTACAT+GGG | - | tig0035561:8053-8072 | Msa1454990:CDS | 45.0% | |
| CTAGTGTCAGCAGAATCTTC+AGG | - | tig0035561:8286-8305 | Msa1454990:CDS | 45.0% | |
| TCTCAGTACAAGCAACACAG+TGG | + | tig0035561:8881-8900 | Msa1454990:intergenic | 45.0% | |
| TGCAAAGAAATGCGTACGAC+TGG | + | tig0035561:9154-9173 | Msa1454990:intergenic | 45.0% | |
| GCCAATGGAACAAGAAGTGA+AGG | + | tig0035561:9221-9240 | Msa1454990:intergenic | 45.0% | |
| TCACTTCTTGTTCCATTGGC+TGG | - | tig0035561:9221-9240 | Msa1454990:five_prime_UTR | 45.0% | |
| !! | AAAAAAATATAATCAAAATT+AGG | + | tig0035561:4219-4238 | Msa1454990:intergenic | 5.0% |
| !!! | TAATTTTTCTTTTAAAAAAA+TGG | - | tig0035561:7072-7091 | Msa1454990:intron | 5.0% |
| GTTGAAGAGAGGCAGAGGTA+GGG | + | tig0035561:183-202 | Msa1454990:intergenic | 50.0% | |
| AAGAGGTTGAAGAGAGGCAG+AGG | + | tig0035561:188-207 | Msa1454990:intergenic | 50.0% | |
| TCAGGGAAGAGGTTGAAGAG+AGG | + | tig0035561:194-213 | Msa1454990:intergenic | 50.0% | |
| AAGTTAGGGTTGGGGTTTCG+TGG | + | tig0035561:244-263 | Msa1454990:intergenic | 50.0% | |
| !!! | AAACGGTCGCTTTTGAGGTG+CGG | + | tig0035561:357-376 | Msa1454990:intergenic | 50.0% |
| !!! | CGAGTAAACGGTCGCTTTTG+AGG | + | tig0035561:362-381 | Msa1454990:intergenic | 50.0% |
| GGGTGCAACACTACCTAGAA+TGG | - | tig0035561:1093-1112 | Msa1454990:CDS | 50.0% | |
| GTGCAGCAATGTCTTCGTGA+TGG | - | tig0035561:1121-1140 | Msa1454990:CDS | 50.0% | |
| CAGCAATGTCTTCGTGATGG+TGG | - | tig0035561:1124-1143 | Msa1454990:CDS | 50.0% | |
| CTGCTTGCAAACCTCACGTT+AGG | - | tig0035561:2062-2081 | Msa1454990:intron | 50.0% | |
| AGGGAGGGAGTTGTGAAAAG+GGG | - | tig0035561:2125-2144 | Msa1454990:intron | 50.0% | |
| TGTGGACACACTTCCAACGA+AGG | - | tig0035561:2723-2742 | Msa1454990:intron | 50.0% | |
| ATGGCAACAGCGAAACTGCA+AGG | + | tig0035561:2809-2828 | Msa1454990:intergenic | 50.0% | |
| TTCTCATAGGGATTTGCCCG+GGG | - | tig0035561:2868-2887 | Msa1454990:intron | 50.0% | |
| TAAGGATGAAGACTGCCAGC+AGG | - | tig0035561:3058-3077 | Msa1454990:intron | 50.0% | |
| AAGTCAGTGGGTGGTACCTT+TGG | + | tig0035561:3789-3808 | Msa1454990:intergenic | 50.0% | |
| CCCAATAGAAAGTCAGTGGG+TGG | + | tig0035561:3798-3817 | Msa1454990:intergenic | 50.0% | |
| !! | CCACATAATTGGTGGGTTGG+GGG | - | tig0035561:4392-4411 | Msa1454990:CDS | 50.0% |
| AAGCTGCTGTCTGGTAAGTG+TGG | - | tig0035561:4975-4994 | Msa1454990:intron | 50.0% | |
| CTGTTGGTGTGGTACAGTCA+TGG | - | tig0035561:5260-5279 | Msa1454990:intron | 50.0% | |
| ATGAAGTCCAGTGCAACCTG+TGG | + | tig0035561:6171-6190 | Msa1454990:intergenic | 50.0% | |
| GACTGTAGGAATGGCCGAAT+AGG | - | tig0035561:6690-6709 | Msa1454990:intron | 50.0% | |
| TCTTGGCCAATGCTGTCTCA+TGG | + | tig0035561:7303-7322 | Msa1454990:intergenic | 50.0% | |
| ! | TGGTGATGTTCTCTTGGACG+AGG | - | tig0035561:8045-8064 | Msa1454990:CDS | 50.0% |
| GTTCTCTTGGACGAGGTACA+TGG | - | tig0035561:8052-8071 | Msa1454990:CDS | 50.0% | |
| AACTTGGATAACAGGAGGGC+AGG | + | tig0035561:8790-8809 | Msa1454990:intergenic | 50.0% | |
| ATGGGGTGCATCAAGCAACA+GGG | + | tig0035561:8843-8862 | Msa1454990:intergenic | 50.0% | |
| TATGGGGTGCATCAAGCAAC+AGG | + | tig0035561:8844-8863 | Msa1454990:intergenic | 50.0% | |
| ACGACTGGAGACTTTCAACC+TGG | + | tig0035561:9139-9158 | Msa1454990:intergenic | 50.0% | |
| TGGCAAACTGAACTCTTGGC+CGG | - | tig0035561:9191-9210 | Msa1454990:five_prime_UTR | 50.0% | |
| AACGACGTCGTTTCGGTTGG+CGG | - | tig0035561:107-126 | Msa1454990:CDS | 55.0% | |
| GGTTGAAGAGAGGCAGAGGT+AGG | + | tig0035561:184-203 | Msa1454990:intergenic | 55.0% | |
| TGGCTGTGCTTCAGGATTGG+AGG | - | tig0035561:558-577 | Msa1454990:CDS | 55.0% | |
| GAGCCAGTTGATTACGGGGA+AGG | - | tig0035561:2187-2206 | Msa1454990:intron | 55.0% | |
| GGTCCTTCCCCGTAATCAAC+TGG | + | tig0035561:2193-2212 | Msa1454990:intergenic | 55.0% | |
| GTTGATTACGGGGAAGGACC+TGG | - | tig0035561:2193-2212 | Msa1454990:intron | 55.0% | |
| CTCACAAGCACGAGCAATCC+CGG | + | tig0035561:2500-2519 | Msa1454990:intergenic | 55.0% | |
| GATTGCTCGTGCTTGTGAGG+AGG | - | tig0035561:2501-2520 | Msa1454990:intron | 55.0% | |
| CACACTTCCAACGAAGGCCT+TGG | - | tig0035561:2729-2748 | Msa1454990:intron | 55.0% | |
| TCAAGGACAGCAAAGCCTGC+TGG | + | tig0035561:3076-3095 | Msa1454990:intergenic | 55.0% | |
| ACTGCTGCACCGAGTTCAGA+AGG | + | tig0035561:3537-3556 | Msa1454990:intergenic | 55.0% | |
| CCCCCAACCCACCAATTATG+TGG | + | tig0035561:4395-4414 | Msa1454990:intergenic | 55.0% | |
| TGCGTTTGCAAGCTGCTGTC+TGG | - | tig0035561:4966-4985 | Msa1454990:intron | 55.0% | |
| TCAGCAATTGTATGCCGGGC+AGG | + | tig0035561:5883-5902 | Msa1454990:intergenic | 55.0% | |
| TCAGCAATTGTATGCCGGGC+AGG | + | tig0035561:5883-5902 | Msa1454990:intergenic | 55.0% | |
| GTGCAACCTGTGGCATAGCA+AGG | + | tig0035561:6161-6180 | Msa1454990:intergenic | 55.0% | |
| TGCTATGCCACAGGTTGCAC+TGG | - | tig0035561:6161-6180 | Msa1454990:CDS | 55.0% | |
| ! | GGGTCTGAAGCAGTGCACAT+TGG | - | tig0035561:9065-9084 | Msa1454990:five_prime_UTR | 55.0% |
| CTTTCAACCTGGACAGCAGC+AGG | + | tig0035561:9128-9147 | Msa1454990:intergenic | 55.0% | |
| CGGGATTGCTCGTGCTTGTG+AGG | - | tig0035561:2498-2517 | Msa1454990:intron | 60.0% | |
| AGGTGTTCCTGCTGCTGTCC+AGG | - | tig0035561:9118-9137 | Msa1454990:five_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0035561 | gene | 106 | 9253 | 106 | ID=Msa1454990;Name=Msa1454990 |
| tig0035561 | mRNA | 106 | 9253 | 106 | ID=Msa1454990-mRNA-1;Parent=Msa1454990;Name=Msa1454990-mRNA-1;_AED=0.05;_eAED=0.05;_QI=190|0.95|0.90|1|1|1|21|0|886 |
| tig0035561 | exon | 106 | 239 | 106 | ID=Msa1454990-mRNA-1:exon:20075;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 536 | 683 | 536 | ID=Msa1454990-mRNA-1:exon:20074;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 1041 | 1193 | 1041 | ID=Msa1454990-mRNA-1:exon:20073;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 1293 | 1390 | 1293 | ID=Msa1454990-mRNA-1:exon:20072;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 1629 | 1809 | 1629 | ID=Msa1454990-mRNA-1:exon:20071;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 2428 | 2508 | 2428 | ID=Msa1454990-mRNA-1:exon:20070;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 2958 | 3038 | 2958 | ID=Msa1454990-mRNA-1:exon:20069;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 3186 | 3319 | 3186 | ID=Msa1454990-mRNA-1:exon:20068;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 4372 | 4540 | 4372 | ID=Msa1454990-mRNA-1:exon:20067;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 5367 | 5441 | 5367 | ID=Msa1454990-mRNA-1:exon:20066;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 5568 | 5699 | 5568 | ID=Msa1454990-mRNA-1:exon:20065;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 5787 | 5869 | 5787 | ID=Msa1454990-mRNA-1:exon:20064;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 6156 | 6304 | 6156 | ID=Msa1454990-mRNA-1:exon:20063;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 6393 | 6482 | 6393 | ID=Msa1454990-mRNA-1:exon:20062;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 6589 | 6644 | 6589 | ID=Msa1454990-mRNA-1:exon:20061;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 6780 | 6947 | 6780 | ID=Msa1454990-mRNA-1:exon:20060;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 7936 | 8097 | 7936 | ID=Msa1454990-mRNA-1:exon:20059;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 8212 | 8305 | 8212 | ID=Msa1454990-mRNA-1:exon:20058;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 8392 | 8487 | 8392 | ID=Msa1454990-mRNA-1:exon:20057;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 8574 | 8787 | 8574 | ID=Msa1454990-mRNA-1:exon:20056;Parent=Msa1454990-mRNA-1 |
| tig0035561 | exon | 8904 | 9253 | 8904 | ID=Msa1454990-mRNA-1:exon:20055;Parent=Msa1454990-mRNA-1 |
| tig0035561 | five_prime_UTR | 9064 | 9253 | 9064 | ID=Msa1454990-mRNA-1:five_prime_utr;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 8904 | 9063 | 8904 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 8574 | 8787 | 8574 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 8392 | 8487 | 8392 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 8212 | 8305 | 8212 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 7936 | 8097 | 7936 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 6780 | 6947 | 6780 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 6589 | 6644 | 6589 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 6393 | 6482 | 6393 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 6156 | 6304 | 6156 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 5787 | 5869 | 5787 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 5568 | 5699 | 5568 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 5367 | 5441 | 5367 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 4372 | 4540 | 4372 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 3186 | 3319 | 3186 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 2958 | 3038 | 2958 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 2428 | 2508 | 2428 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 1629 | 1809 | 1629 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 1293 | 1390 | 1293 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 1041 | 1193 | 1041 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 536 | 683 | 536 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| tig0035561 | CDS | 106 | 239 | 106 | ID=Msa1454990-mRNA-1:cds;Parent=Msa1454990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
