AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0756680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0756680 MtrunA17_Chr5g0401891 92.054 516 11 4 1 491 1 511 0.0 970
Msa0756680 MtrunA17_Chr4g0053181 65.378 543 114 19 1 491 1 521 0.0 547
Msa0756680 MtrunA17_Chr7g0263581 80.892 157 30 0 151 307 158 314 9.62e-79 253
Msa0756680 MtrunA17_Chr4g0030191 49.558 339 106 10 1 307 1 306 4.00e-75 244
Msa0756680 MtrunA17_Chr2g0325911 70.701 157 31 1 151 307 153 294 5.20e-62 209
Msa0756680 MtrunA17_Chr3g0126151 79.787 94 19 0 170 263 47 140 3.33e-49 165
Msa0756680 MtrunA17_Chr8g0367311 55.970 134 58 1 156 288 19 152 8.44e-43 152
Msa0756680 MtrunA17_Chr7g0216601 53.846 143 65 1 153 294 99 241 1.05e-42 156
Msa0756680 MtrunA17_Chr4g0072291 55.634 142 62 1 146 286 186 327 1.40e-42 158
Msa0756680 MtrunA17_Chr4g0054351 54.167 144 65 1 146 288 337 480 1.43e-42 160
Msa0756680 MtrunA17_Chr7g0249621 47.486 179 85 2 146 323 286 456 7.04e-42 158
Msa0756680 MtrunA17_Chr4g0032631 52.817 142 66 1 146 286 190 331 1.39e-41 156
Msa0756680 MtrunA17_Chr5g0400871 53.472 144 66 1 146 288 276 419 5.37e-41 154
Msa0756680 MtrunA17_Chr6g0452911 52.941 136 63 1 159 293 108 243 7.91e-40 147
Msa0756680 MtrunA17_Chr3g0135161 52.778 144 64 2 146 288 337 477 6.66e-39 150
Msa0756680 MtrunA17_Chr8g0355191 53.846 143 62 2 153 294 89 228 9.28e-39 145
Msa0756680 MtrunA17_Chr1g0152161 51.389 144 66 2 146 288 339 479 1.68e-37 145
Msa0756680 MtrunA17_Chr2g0328971 52.113 142 64 2 146 286 194 332 2.30e-37 144
Msa0756680 MtrunA17_Chr8g0343851 54.264 129 58 1 159 286 285 413 4.64e-37 144
Msa0756680 MtrunA17_Chr4g0002011 50.299 167 75 3 153 318 70 229 8.87e-36 135
Msa0756680 MtrunA17_Chr4g0073521 51.562 128 61 1 159 285 84 211 5.57e-35 134
Msa0756680 MtrunA17_Chr5g0412151 53.333 150 69 1 146 294 251 400 7.91e-35 136
Msa0756680 MtrunA17_Chr8g0355181 53.623 138 60 2 153 289 90 224 1.41e-33 130
Msa0756680 MtrunA17_Chr8g0362541 50.000 148 56 3 153 285 103 247 2.34e-29 119
Msa0756680 MtrunA17_Chr1g0170761 35.880 301 124 10 40 307 34 298 4.37e-28 115
Msa0756680 MtrunA17_Chr7g0257361 50.000 96 44 1 153 248 91 182 5.92e-16 79.7
Msa0756680 MtrunA17_Chr2g0305831 60.000 55 22 0 231 285 5 59 7.43e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0756680 AT4G36920.1 62.000 350 57 9 1 311 1 313 5.23e-117 351
Msa0756680 AT4G36920.2 62.000 350 57 9 1 311 1 313 5.23e-117 351
Msa0756680 AT5G67180.2 51.754 342 69 10 1 312 1 276 9.06e-84 261
Msa0756680 AT5G67180.1 51.754 342 69 10 1 312 1 276 9.28e-84 263
Msa0756680 AT5G67180.3 51.582 316 61 8 1 288 1 252 8.82e-78 245
Msa0756680 AT2G28550.3 81.410 156 29 0 151 306 172 327 5.26e-76 246
Msa0756680 AT2G28550.1 73.718 156 26 1 151 306 172 312 1.50e-61 208
Msa0756680 AT5G67180.4 48.630 292 58 8 1 264 1 228 2.29e-60 199
Msa0756680 AT2G28550.5 69.872 156 32 1 151 306 6 146 4.20e-58 194
Msa0756680 AT2G28550.4 88.393 112 13 0 151 262 172 283 7.42e-58 195
Msa0756680 AT2G28550.2 89.691 97 10 0 151 247 172 268 1.09e-47 166
Msa0756680 AT2G28550.6 89.691 97 10 0 151 247 172 268 1.09e-47 166
Msa0756680 AT5G57390.2 49.451 182 74 3 146 311 109 288 5.74e-43 158
Msa0756680 AT5G57390.1 49.451 182 74 3 146 311 227 406 2.08e-42 159
Msa0756680 AT1G51190.1 54.225 142 64 1 146 286 214 355 8.27e-42 157
Msa0756680 AT1G72570.1 54.074 135 61 1 153 286 254 388 5.77e-41 152
Msa0756680 AT3G20840.1 52.000 150 71 1 146 294 205 354 6.75e-41 155
Msa0756680 AT4G37750.1 45.455 187 96 3 153 333 314 500 1.06e-40 154
Msa0756680 AT5G17430.2 44.615 195 91 4 146 323 172 366 3.79e-40 152
Msa0756680 AT5G17430.1 44.615 195 91 4 146 323 234 428 7.63e-40 152
Msa0756680 AT5G60120.4 51.531 196 51 3 139 311 144 318 2.14e-39 147
Msa0756680 AT5G60120.3 51.531 196 51 3 139 311 144 318 2.14e-39 147
Msa0756680 AT5G60120.5 51.531 196 51 3 139 311 144 318 2.14e-39 147
Msa0756680 AT5G60120.6 51.531 196 51 3 139 311 144 318 5.35e-39 148
Msa0756680 AT5G60120.1 51.531 196 51 3 139 311 144 318 5.43e-39 148
Msa0756680 AT5G60120.2 51.531 196 51 3 139 311 144 318 1.07e-38 147
Msa0756680 AT3G54320.3 55.072 138 61 1 153 289 96 233 3.29e-35 136
Msa0756680 AT5G65510.4 45.662 219 96 5 146 358 197 398 4.08e-35 136
Msa0756680 AT3G54320.1 55.072 138 61 1 153 289 96 233 4.20e-35 136
Msa0756680 AT5G65510.2 52.096 167 74 3 146 306 255 421 1.05e-34 136
Msa0756680 AT5G65510.1 52.096 167 74 3 146 306 255 421 1.05e-34 136
Msa0756680 AT5G10510.7 50.588 170 79 3 146 311 254 422 1.67e-33 133
Msa0756680 AT5G10510.5 50.588 170 79 3 146 311 254 422 1.67e-33 133
Msa0756680 AT5G10510.6 50.588 170 79 3 146 311 292 460 2.50e-33 133
Msa0756680 AT5G10510.4 50.588 170 79 3 146 311 292 460 2.50e-33 133
Msa0756680 AT5G10510.1 50.588 170 79 3 146 311 277 445 2.80e-33 133
Msa0756680 AT3G54320.4 54.074 135 61 1 156 289 33 167 1.53e-32 127
Msa0756680 AT3G54320.5 54.074 135 61 1 156 289 33 167 1.53e-32 127
Msa0756680 AT2G39250.1 46.296 162 57 5 151 311 127 259 2.73e-32 126
Msa0756680 AT2G39250.2 68.421 76 24 0 151 226 127 202 6.02e-31 120
Msa0756680 AT5G65510.3 51.818 110 52 1 146 254 197 306 4.04e-30 120
Msa0756680 AT1G79700.2 53.378 148 65 2 153 299 83 227 1.86e-29 118
Msa0756680 AT5G10510.2 48.824 170 79 4 146 311 254 419 2.26e-29 121
Msa0756680 AT1G79700.3 52.000 150 68 2 151 299 5 151 1.64e-28 113
Msa0756680 AT1G16060.1 56.716 134 57 1 153 285 89 222 3.08e-28 115
Msa0756680 AT5G10510.3 50.000 156 73 3 160 311 326 480 5.91e-28 117
Msa0756680 AT1G16060.3 55.147 136 60 1 151 285 17 152 3.21e-27 110
Msa0756680 AT1G79700.4 51.748 143 65 2 158 299 6 145 3.21e-26 107
Msa0756680 AT3G54990.1 56.557 122 39 2 151 272 141 248 4.16e-26 109
Msa0756680 AT3G54990.2 67.045 88 29 0 151 238 141 228 6.51e-26 106
Msa0756680 AT1G79700.1 50.000 148 60 3 153 299 83 217 1.33e-22 98.6
Msa0756680 AT3G54320.2 58.696 92 37 1 199 289 1 92 4.22e-20 90.9
Msa0756680 AT1G16060.2 57.955 88 36 1 199 285 1 88 5.34e-18 83.2
Msa0756680 AT1G16060.4 57.955 88 36 1 199 285 1 88 5.34e-18 83.2
Msa0756680 AT1G16060.6 57.955 88 36 1 199 285 1 88 5.34e-18 83.2
Msa0756680 AT1G16060.5 57.955 88 36 1 199 285 1 88 5.34e-18 83.2
Msa0756680 AT2G41710.1 50.000 96 44 1 153 248 101 192 5.00e-16 80.5
Msa0756680 AT2G41710.4 50.000 96 44 1 153 248 101 192 6.60e-16 80.5
Msa0756680 AT2G41710.3 50.000 96 44 1 153 248 136 227 9.32e-16 80.1
Msa0756680 AT2G41710.2 47.525 101 44 2 153 248 101 197 5.73e-14 74.3

Find 126 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTACCAGGTATGTTTATC+TGG 0.164819 5_2:+11186026 Msa0756680:intron
TTGTGGAAAACAAGTGTATT+TGG 0.188508 5_2:+11185185 Msa0756680:CDS
ACCAATGAGTGTTCCCAATT+TGG 0.196957 5_2:-11187626 None:intergenic
CACAATTTGGATTTGAGTTT+GGG 0.208325 5_2:+11186396 Msa0756680:CDS
ATTTAAATGTGAATTTAAAA+TGG 0.226076 5_2:-11187506 None:intergenic
CCATTCCTCCAATTTGATTC+AGG 0.233113 5_2:-11186501 None:intergenic
CCACAATTTGGATTTGAGTT+TGG 0.249484 5_2:+11186395 Msa0756680:CDS
GTGATGAAAGTAAGCCAAAT+TGG 0.254365 5_2:+11187612 Msa0756680:three_prime_UTR
AGCAATAATAATCAAGCATT+TGG 0.287575 5_2:+11186438 Msa0756680:CDS
ATATATGCTGGGATCAAAAT+TGG 0.291483 5_2:-11186238 None:intergenic
TAACGCTGCAGACCACAATT+TGG 0.304218 5_2:+11186383 Msa0756680:CDS
ACATGGCACCTGAATCAAAT+TGG 0.331476 5_2:+11186493 Msa0756680:CDS
TATGATAATGAACTTAATTC+TGG 0.336630 5_2:+11186258 Msa0756680:CDS
CTACTACATAGATATTATTC+TGG 0.339780 5_2:+11187715 Msa0756680:three_prime_UTR
GAAGTTGATGTTGATGAAAA+AGG 0.344176 5_2:+11184469 Msa0756680:CDS
AAATCTATGCATTTCATTAG+TGG 0.352170 5_2:-11186760 None:intergenic
GCTCGAATGGGTCAATTCTT+AGG 0.356813 5_2:+11185861 Msa0756680:CDS
AGAGCTGCAATTAAGTTTAG+AGG 0.359998 5_2:+11185564 Msa0756680:CDS
TGAGGGTGTTGTTCAATCAT+AGG 0.361856 5_2:-11186798 None:intergenic
TGTGGAAAACAAGTGTATTT+GGG 0.366345 5_2:+11185186 Msa0756680:CDS
GAAGAAGAGGGTCTTATTTG+AGG 0.370931 5_2:-11187392 None:intergenic
TTACTTATACCACATGGTTT+AGG 0.372438 5_2:-11186651 None:intergenic
GATCAACAAAAGTGGCAATC+AGG 0.378821 5_2:+11187320 Msa0756680:CDS
AAGATTGATGAAGGTGAGTT+TGG 0.381267 5_2:-11186731 None:intergenic
ACGGTGGTGGATTCTTCTTC+CGG 0.386725 5_2:+11184682 Msa0756680:CDS
TTCAATCATAGGTAACCTAT+AGG 0.401676 5_2:-11186787 None:intergenic
ACTAATGAAATGCATAGATT+TGG 0.402036 5_2:+11186762 Msa0756680:CDS
TCACCTCAATGGTAAAGTTA+TGG 0.404672 5_2:-11187584 None:intergenic
GCCAAATTGGGAACACTCAT+TGG 0.407648 5_2:+11187625 Msa0756680:three_prime_UTR
CATCACTTCTTTCACCTCAA+TGG 0.409017 5_2:-11187595 None:intergenic
GGCTTTGTAAGGGATGGATA+TGG 0.410468 5_2:+11186681 Msa0756680:CDS
GTGGATTCTTCTTCCGGTGG+TGG 0.421531 5_2:+11184688 Msa0756680:CDS
TCTTCTTCCGGTGGTGGTGG+TGG 0.422476 5_2:+11184694 Msa0756680:CDS
AAGTTCATTATCATATATGC+TGG 0.427130 5_2:-11186250 None:intergenic
CTATATTTAGAACTTCCTCT+TGG 0.428532 5_2:-11185804 None:intergenic
GCAATAATAATCAAGCATTT+GGG 0.440075 5_2:+11186439 Msa0756680:CDS
TCTTCCGGTGGTGGTGGTGG+TGG 0.444842 5_2:+11184697 Msa0756680:CDS
ACACCAACCCAATGAGCTCT+TGG 0.445124 5_2:-11184739 None:intergenic
ATGTTAAATCACTTCCGATT+CGG 0.449101 5_2:-11187286 None:intergenic
GCAACTGCTGCAGCATCATC+AGG 0.454716 5_2:+11187362 Msa0756680:CDS
GGAAAATTGTGAAGCATTTG+AGG 0.458096 5_2:-11186816 None:intergenic
AAGAGGGTCTTATTTGAGGT+GGG 0.458874 5_2:-11187388 None:intergenic
TGATGAAAGTAAGCCAAATT+GGG 0.459819 5_2:+11187613 Msa0756680:three_prime_UTR
GATTCTTCTTCCGGTGGTGG+TGG 0.465665 5_2:+11184691 Msa0756680:CDS
TGCATAGATTTGGTCCCTAT+AGG 0.465996 5_2:+11186772 Msa0756680:CDS
GTTTCGAGCAGCAGCAGCAA+TGG 0.467071 5_2:+11187260 Msa0756680:CDS
AGCAGCAATGGAGGCCGAAT+CGG 0.467356 5_2:+11187272 Msa0756680:CDS
GTAACATGGATGGCTTTGTA+AGG 0.467763 5_2:+11186670 Msa0756680:CDS
TTATGAAGAGGATTTGAAGC+AGG 0.468923 5_2:+11185620 Msa0756680:CDS
TGTTTGTGATGCAGGGATTG+TGG 0.469882 5_2:+11185168 Msa0756680:intron
GACCCTCTTCTTCTCAAGGT+TGG 0.474676 5_2:+11187402 Msa0756680:CDS
TTTACCAGGTATGTTTATCT+GGG 0.478888 5_2:+11186027 Msa0756680:intron
TCAGCAATAGTTATAGAAGA+TGG 0.485881 5_2:+11184526 Msa0756680:CDS
GAAGAGGGTCTTATTTGAGG+TGG 0.487844 5_2:-11187389 None:intergenic
TCAATCATAGGTAACCTATA+GGG 0.489373 5_2:-11186786 None:intergenic
TTTCCAAGAGCTCATTGGGT+TGG 0.496635 5_2:+11184736 Msa0756680:CDS
TGGAAGATGGGAAGCTCGAA+TGG 0.497218 5_2:+11185848 Msa0756680:CDS
AGTACTCACATGAAAATTTG+AGG 0.498999 5_2:-11186850 None:intergenic
CCTCTACGACTCTTCTTCAT+CGG 0.503225 5_2:-11184811 None:intergenic
ATCAACAAAAGTGGCAATCA+GGG 0.513697 5_2:+11187321 Msa0756680:CDS
CAATGTCTGATCAACAAAAG+TGG 0.521031 5_2:+11187312 Msa0756680:CDS
GTACTCACATGAAAATTTGA+GGG 0.522748 5_2:-11186849 None:intergenic
AATGTGAATTTAAAATGGCA+AGG 0.523528 5_2:-11187501 None:intergenic
TGAATCAGAAGGGTGTTCAA+TGG 0.523804 5_2:+11184432 Msa0756680:CDS
ATCATATCAGAATCCTCTAC+AGG 0.526722 5_2:-11184655 None:intergenic
AAACCATAACTTTACCATTG+AGG 0.527878 5_2:+11187581 Msa0756680:three_prime_UTR
AGAGGAAGTTCTAAATATAG+AGG 0.528159 5_2:+11185807 Msa0756680:CDS
ATTAATGTTGTTGTTCAAGA+GGG 0.529810 5_2:-11187458 None:intergenic
ATAAGACCCTCTTCTTCTCA+AGG 0.535452 5_2:+11187398 Msa0756680:CDS
TATTAAATGACAGAATCATC+AGG 0.536179 5_2:+11186360 Msa0756680:intron
CCTGAATCAAATTGGAGGAA+TGG 0.544200 5_2:+11186501 Msa0756680:CDS
GAGTCAGTCAAACTAACAAA+CGG 0.545154 5_2:+11187658 Msa0756680:three_prime_UTR
CTTTGCACAAATGTGGAAGA+TGG 0.545876 5_2:+11185835 Msa0756680:CDS
ATGGATGGCTTTGTAAGGGA+TGG 0.546373 5_2:+11186675 Msa0756680:CDS
TGATATGATAACAACGGTGG+TGG 0.547214 5_2:+11184669 Msa0756680:CDS
GTTGCTAACAAATGTGGAGG+AGG 0.549490 5_2:-11187344 None:intergenic
GTACTACGACGACAAAGCAC+TGG 0.549832 5_2:+11185777 Msa0756680:CDS
AGTTTGGCTTAGCATCCTCA+AGG 0.553874 5_2:-11186715 None:intergenic
TTGTTCAAGAGGGTCTCATG+AGG 0.554656 5_2:-11187448 None:intergenic
AAAGCAGCAATTAAATGCAA+TGG 0.555160 5_2:+11186201 Msa0756680:CDS
AAGAGGGTCTCATGAGGGTG+TGG 0.558814 5_2:-11187442 None:intergenic
GATGGATCGGAAGAAGAAGA+TGG 0.559991 5_2:+11184544 Msa0756680:CDS
CAGCCAACCTTGAGAAGAAG+AGG 0.562311 5_2:-11187405 None:intergenic
CAATATTGAAGATTATGAAG+AGG 0.562600 5_2:+11185608 Msa0756680:CDS
GAAAATTGTGAAGCATTTGA+GGG 0.565877 5_2:-11186815 None:intergenic
AATTAAGTTTAGAGGAGTAG+AGG 0.566590 5_2:+11185572 Msa0756680:CDS
TCGAGCAGCAGCAGCAATGG+AGG 0.568082 5_2:+11187263 Msa0756680:CDS
AATTAATGTTGTTGTTCAAG+AGG 0.570734 5_2:-11187459 None:intergenic
AGTTCATTATCATATATGCT+GGG 0.572364 5_2:-11186249 None:intergenic
TGTTCAAGAGGGTCTCATGA+GGG 0.574371 5_2:-11187447 None:intergenic
GGTTTAGGTAGTATATTCAC+AGG 0.579088 5_2:-11186636 None:intergenic
TAACATGGATGGCTTTGTAA+GGG 0.583711 5_2:+11186671 Msa0756680:CDS
GAATCAAATTGGAGGAATGG+TGG 0.592241 5_2:+11186504 Msa0756680:CDS
AATAGTTATAGAAGATGGAT+CGG 0.593835 5_2:+11184531 Msa0756680:CDS
TCAGAAGGGTGTTCAATGGA+AGG 0.596722 5_2:+11184436 Msa0756680:CDS
TTAGATGAGCAATTTAACAA+AGG 0.599726 5_2:+11185740 Msa0756680:intron
GGAAGATGGGAAGCTCGAAT+GGG 0.600193 5_2:+11185849 Msa0756680:CDS
GTGGTGGATTCTTCTTCCGG+TGG 0.601398 5_2:+11184685 Msa0756680:CDS
TGGCACCTGAATCAAATTGG+AGG 0.603679 5_2:+11186496 Msa0756680:CDS
GAATGGTGGAATCAGACCTA+AGG 0.607230 5_2:+11186518 Msa0756680:CDS
ACCATGTGGTATAAGTAACA+TGG 0.608746 5_2:+11186656 Msa0756680:CDS
TTTGCACAAATGTGGAAGAT+GGG 0.610285 5_2:+11185836 Msa0756680:CDS
ACACAGCACATGCAGCTGCT+CGG 0.611926 5_2:+11185412 Msa0756680:CDS
CCAAACTCAAATCCAAATTG+TGG 0.612263 5_2:-11186395 None:intergenic
TCCATGTTACTTATACCACA+TGG 0.613151 5_2:-11186657 None:intergenic
TGTCACCACTGATCAATACA+TGG 0.617546 5_2:+11186476 Msa0756680:CDS
ACACTGAGATTGAAGCTGCA+AGG 0.619137 5_2:+11186058 Msa0756680:CDS
AATTAAATGCAATGGCAAAG+AGG 0.621562 5_2:+11186209 Msa0756680:CDS
ACAATTTGGATTTGAGTTTG+GGG 0.624070 5_2:+11186397 Msa0756680:CDS
AAATTTGAGGGGTGAAGATG+TGG 0.624965 5_2:-11186837 None:intergenic
GGTGTGACTTTGCACAAATG+TGG 0.632709 5_2:+11185828 Msa0756680:CDS
AGCCAACCTTGAGAAGAAGA+GGG 0.638756 5_2:-11187404 None:intergenic
TGAGCATGTACAAATGAATG+CGG 0.642805 5_2:+11187544 Msa0756680:three_prime_UTR
GCAGCAGTTGCTAACAAATG+TGG 0.642916 5_2:-11187350 None:intergenic
ATGGAGAGAATGAAGCCTTG+AGG 0.645373 5_2:+11186700 Msa0756680:CDS
TGGCAACTGAAGATTGATGA+AGG 0.653404 5_2:-11186740 None:intergenic
GCAGTTGCTAACAAATGTGG+AGG 0.654906 5_2:-11187347 None:intergenic
TGTGGTATAAGTAACATGGA+TGG 0.657805 5_2:+11186660 Msa0756680:CDS
AGAAGAGTCGTAGAGGACCA+AGG 0.658620 5_2:+11184818 Msa0756680:CDS
TACTCACATGAAAATTTGAG+GGG 0.661433 5_2:-11186848 None:intergenic
CCGATGAAGAAGAGTCGTAG+AGG 0.674974 5_2:+11184811 Msa0756680:CDS
TTCTGATATGATAACAACGG+TGG 0.685987 5_2:+11184666 Msa0756680:CDS
CAAAGCACTGGATTTCCAAG+AGG 0.688369 5_2:+11185789 Msa0756680:CDS
AGGTGCCATGTATTGATCAG+TGG 0.699263 5_2:-11186481 None:intergenic
GGATTCTGATATGATAACAA+CGG 0.710166 5_2:+11184663 Msa0756680:CDS
AATATACTACCTAAACCATG+TGG 0.721947 5_2:+11186642 Msa0756680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATCTATTTCATTTAT+AGG - chr5_2:11185980-11185999 None:intergenic 10.0%
!! ATTTAAATGTGAATTTAAAA+TGG - chr5_2:11187509-11187528 None:intergenic 10.0%
!! ATAACTAGCTATTTATTATT+TGG + chr5_2:11185111-11185130 Msa0756680:intron 15.0%
!!! ATATGAATTTGAATGTTTTT+TGG + chr5_2:11185142-11185161 Msa0756680:intron 15.0%
!!! AAATTTCATTCATTCTTTTA+TGG + chr5_2:11185462-11185481 Msa0756680:intron 15.0%
!! TATACTAAATATATGTATGT+AGG - chr5_2:11185502-11185521 None:intergenic 15.0%
!! ATTAATCAATAGAATAAGAT+TGG - chr5_2:11186574-11186593 None:intergenic 15.0%
!! AAAAAGAGTAGTAAGATATT+TGG + chr5_2:11184580-11184599 Msa0756680:CDS 20.0%
!!! TAAGATATTTGGATTTTCAA+TGG + chr5_2:11184591-11184610 Msa0756680:CDS 20.0%
!!! TTCATTTTTTCAGATTATCA+CGG + chr5_2:11184997-11185016 Msa0756680:intron 20.0%
!!! ATAATAAAAATTGATTTGGG+AGG + chr5_2:11185286-11185305 Msa0756680:intron 20.0%
!!! TAATAAAAATTGATTTGGGA+GGG + chr5_2:11185287-11185306 Msa0756680:intron 20.0%
!! TATATTGTGAAGAAGATTTA+AGG + chr5_2:11185339-11185358 Msa0756680:intron 20.0%
!! ATATTGTGAAGAAGATTTAA+GGG + chr5_2:11185340-11185359 Msa0756680:intron 20.0%
!!! TATGATAATGAACTTAATTC+TGG + chr5_2:11186258-11186277 Msa0756680:CDS 20.0%
!! AATTACATTACATTTACCTT+AGG - chr5_2:11186537-11186556 None:intergenic 20.0%
!! TACTTAAAATTGTACTTGTA+TGG + chr5_2:11186936-11186955 Msa0756680:intron 20.0%
!!! ATGAATATGTTCAATTTTAG+AGG + chr5_2:11187060-11187079 Msa0756680:intron 20.0%
!! TTGAATTGAAATGATTATGA+AGG + chr5_2:11187238-11187257 Msa0756680:intron 20.0%
! AGAAAAAACTATGAATCAGA+AGG + chr5_2:11184421-11184440 Msa0756680:CDS 25.0%
! GAAAAAACTATGAATCAGAA+GGG + chr5_2:11184422-11184441 Msa0756680:CDS 25.0%
! AATAGTTATAGAAGATGGAT+CGG + chr5_2:11184531-11184550 Msa0756680:CDS 25.0%
!! AAATTTTGTCAATCAGAAAC+CGG + chr5_2:11184763-11184782 Msa0756680:CDS 25.0%
!!! TCATTTTTTCAGATTATCAC+GGG + chr5_2:11184998-11185017 Msa0756680:intron 25.0%
! CAATATTGAAGATTATGAAG+AGG + chr5_2:11185608-11185627 Msa0756680:CDS 25.0%
! TTAGATGAGCAATTTAACAA+AGG + chr5_2:11185740-11185759 Msa0756680:intron 25.0%
!! TTAGTTTGATTCAATTTACC+AGG + chr5_2:11186013-11186032 Msa0756680:intron 25.0%
! GGGAAAACAACAAATTAAAT+TGG - chr5_2:11186105-11186124 None:intergenic 25.0%
! TAATATATAAAGTGCATGCT+AGG + chr5_2:11186136-11186155 Msa0756680:intron 25.0%
! AATATATAAAGTGCATGCTA+GGG + chr5_2:11186137-11186156 Msa0756680:intron 25.0%
! AGTTCATTATCATATATGCT+GGG - chr5_2:11186252-11186271 None:intergenic 25.0%
! AAGTTCATTATCATATATGC+TGG - chr5_2:11186253-11186272 None:intergenic 25.0%
! TATTAAATGACAGAATCATC+AGG + chr5_2:11186360-11186379 Msa0756680:intron 25.0%
! AGCAATAATAATCAAGCATT+TGG + chr5_2:11186438-11186457 Msa0756680:CDS 25.0%
! GCAATAATAATCAAGCATTT+GGG + chr5_2:11186439-11186458 Msa0756680:CDS 25.0%
! AAATCTATGCATTTCATTAG+TGG - chr5_2:11186763-11186782 None:intergenic 25.0%
! ACTAATGAAATGCATAGATT+TGG + chr5_2:11186762-11186781 Msa0756680:CDS 25.0%
! GACAATTTCAAGATATTGAA+AGG - chr5_2:11187023-11187042 None:intergenic 25.0%
! TATTCATTACATTAGTCCTT+TGG - chr5_2:11187047-11187066 None:intergenic 25.0%
! TTTGAACACTAAAACATGTT+TGG + chr5_2:11187095-11187114 Msa0756680:intron 25.0%
!! ATTAATGTTGTTGTTCAAGA+GGG - chr5_2:11187461-11187480 None:intergenic 25.0%
!! AATTAATGTTGTTGTTCAAG+AGG - chr5_2:11187462-11187481 None:intergenic 25.0%
!! AATGTGAATTTAAAATGGCA+AGG - chr5_2:11187504-11187523 None:intergenic 25.0%
! CTACTACATAGATATTATTC+TGG + chr5_2:11187715-11187734 Msa0756680:three_prime_UTR 25.0%
!!! TCATAGTTTTTTCTCTGATC+AGG - chr5_2:11184415-11184434 None:intergenic 30.0%
!! GAAGTTGATGTTGATGAAAA+AGG + chr5_2:11184469-11184488 Msa0756680:CDS 30.0%
! GATGTTGATGAAAAAGGAAA+AGG + chr5_2:11184475-11184494 Msa0756680:CDS 30.0%
TCAGCAATAGTTATAGAAGA+TGG + chr5_2:11184526-11184545 Msa0756680:CDS 30.0%
GGATTCTGATATGATAACAA+CGG + chr5_2:11184663-11184682 Msa0756680:CDS 30.0%
!!! GTTACTTTTTACAGAAGAAC+AGG + chr5_2:11184865-11184884 Msa0756680:intron 30.0%
TTGTGGAAAACAAGTGTATT+TGG + chr5_2:11185185-11185204 Msa0756680:CDS 30.0%
TGTGGAAAACAAGTGTATTT+GGG + chr5_2:11185186-11185205 Msa0756680:CDS 30.0%
TGTAAGATCAGTTACATATG+TGG + chr5_2:11185227-11185246 Msa0756680:intron 30.0%
ACATATGTGGTAGTTAAAAG+TGG + chr5_2:11185240-11185259 Msa0756680:intron 30.0%
AATTAAGTTTAGAGGAGTAG+AGG + chr5_2:11185572-11185591 Msa0756680:CDS 30.0%
! CTATATTTAGAACTTCCTCT+TGG - chr5_2:11185807-11185826 None:intergenic 30.0%
!! AGAGGAAGTTCTAAATATAG+AGG + chr5_2:11185807-11185826 Msa0756680:CDS 30.0%
ATTTACCAGGTATGTTTATC+TGG + chr5_2:11186026-11186045 Msa0756680:intron 30.0%
TTTACCAGGTATGTTTATCT+GGG + chr5_2:11186027-11186046 Msa0756680:intron 30.0%
!!! GCTAGGGTTTTAAATTTTTG+TGG + chr5_2:11186153-11186172 Msa0756680:intron 30.0%
!! TTTGTGGCTCATTTTGTTTA+AGG + chr5_2:11186169-11186188 Msa0756680:intron 30.0%
!! TTGTGGCTCATTTTGTTTAA+GGG + chr5_2:11186170-11186189 Msa0756680:intron 30.0%
AAAGCAGCAATTAAATGCAA+TGG + chr5_2:11186201-11186220 Msa0756680:CDS 30.0%
AATTAAATGCAATGGCAAAG+AGG + chr5_2:11186209-11186228 Msa0756680:CDS 30.0%
ATATATGCTGGGATCAAAAT+TGG - chr5_2:11186241-11186260 None:intergenic 30.0%
! CACAATTTGGATTTGAGTTT+GGG + chr5_2:11186396-11186415 Msa0756680:CDS 30.0%
! ACAATTTGGATTTGAGTTTG+GGG + chr5_2:11186397-11186416 Msa0756680:CDS 30.0%
AATATACTACCTAAACCATG+TGG + chr5_2:11186642-11186661 Msa0756680:CDS 30.0%
TTACTTATACCACATGGTTT+AGG - chr5_2:11186654-11186673 None:intergenic 30.0%
TCAATCATAGGTAACCTATA+GGG - chr5_2:11186789-11186808 None:intergenic 30.0%
TTCAATCATAGGTAACCTAT+AGG - chr5_2:11186790-11186809 None:intergenic 30.0%
! GAAAATTGTGAAGCATTTGA+GGG - chr5_2:11186818-11186837 None:intergenic 30.0%
TACTCACATGAAAATTTGAG+GGG - chr5_2:11186851-11186870 None:intergenic 30.0%
GTACTCACATGAAAATTTGA+GGG - chr5_2:11186852-11186871 None:intergenic 30.0%
AGTACTCACATGAAAATTTG+AGG - chr5_2:11186853-11186872 None:intergenic 30.0%
!!! TACTTTCTCTTTTAGCTCAT+TGG + chr5_2:11186883-11186902 Msa0756680:intron 30.0%
TATCTTGAAATTGTCTCCAA+AGG + chr5_2:11187028-11187047 Msa0756680:intron 30.0%
!! GCGATTCTTTAAAATATACC+TGG - chr5_2:11187124-11187143 None:intergenic 30.0%
TGAGCTAAAGACTATTCTTT+AGG + chr5_2:11187146-11187165 Msa0756680:intron 30.0%
!! AGACTATTCTTTAGGACTAT+AGG + chr5_2:11187154-11187173 Msa0756680:intron 30.0%
ATGTTAAATCACTTCCGATT+CGG - chr5_2:11187289-11187308 None:intergenic 30.0%
AAACCATAACTTTACCATTG+AGG + chr5_2:11187581-11187600 Msa0756680:three_prime_UTR 30.0%
TGATGAAAGTAAGCCAAATT+GGG + chr5_2:11187613-11187632 Msa0756680:three_prime_UTR 30.0%
GATGAAAAAGGAAAAGGAGT+TGG + chr5_2:11184481-11184500 Msa0756680:CDS 35.0%
!!! TAGACAGTTTTTTCCTGTAG+AGG + chr5_2:11184642-11184661 Msa0756680:CDS 35.0%
ATCATATCAGAATCCTCTAC+AGG - chr5_2:11184658-11184677 None:intergenic 35.0%
TTCTGATATGATAACAACGG+TGG + chr5_2:11184666-11184685 Msa0756680:CDS 35.0%
! TTCTTTTCCAAGAGCTCATT+GGG + chr5_2:11184732-11184751 Msa0756680:CDS 35.0%
!! TCCATATTACTTCTGAAGCA+CGG + chr5_2:11184923-11184942 Msa0756680:intron 35.0%
TTAAGGGATAACTGATGAGA+TGG + chr5_2:11185356-11185375 Msa0756680:intron 35.0%
TTGTCTGGGTAAATTTGTGT+AGG + chr5_2:11185381-11185400 Msa0756680:intron 35.0%
AGAGCTGCAATTAAGTTTAG+AGG + chr5_2:11185564-11185583 Msa0756680:CDS 35.0%
! TTATGAAGAGGATTTGAAGC+AGG + chr5_2:11185620-11185639 Msa0756680:CDS 35.0%
! ATTTGAAGCAGGTGAGTTAT+GGG + chr5_2:11185631-11185650 Msa0756680:intron 35.0%
TTTGCACAAATGTGGAAGAT+GGG + chr5_2:11185836-11185855 Msa0756680:CDS 35.0%
CCAAACTCAAATCCAAATTG+TGG - chr5_2:11186398-11186417 None:intergenic 35.0%
! CCACAATTTGGATTTGAGTT+TGG + chr5_2:11186395-11186414 Msa0756680:CDS 35.0%
GGTTTAGGTAGTATATTCAC+AGG - chr5_2:11186639-11186658 None:intergenic 35.0%
ACCATGTGGTATAAGTAACA+TGG + chr5_2:11186656-11186675 Msa0756680:CDS 35.0%
! TCCATGTTACTTATACCACA+TGG - chr5_2:11186660-11186679 None:intergenic 35.0%
TGTGGTATAAGTAACATGGA+TGG + chr5_2:11186660-11186679 Msa0756680:CDS 35.0%
!! TAACATGGATGGCTTTGTAA+GGG + chr5_2:11186671-11186690 Msa0756680:CDS 35.0%
AAGATTGATGAAGGTGAGTT+TGG - chr5_2:11186734-11186753 None:intergenic 35.0%
! GGAAAATTGTGAAGCATTTG+AGG - chr5_2:11186819-11186838 None:intergenic 35.0%
CTAAAACATGTTTGGATTCC+AGG + chr5_2:11187103-11187122 Msa0756680:intron 35.0%
CAATGTCTGATCAACAAAAG+TGG + chr5_2:11187312-11187331 Msa0756680:CDS 35.0%
ATCAACAAAAGTGGCAATCA+GGG + chr5_2:11187321-11187340 Msa0756680:CDS 35.0%
TGAGCATGTACAAATGAATG+CGG + chr5_2:11187544-11187563 Msa0756680:three_prime_UTR 35.0%
TCACCTCAATGGTAAAGTTA+TGG - chr5_2:11187587-11187606 None:intergenic 35.0%
GTGATGAAAGTAAGCCAAAT+TGG + chr5_2:11187612-11187631 Msa0756680:three_prime_UTR 35.0%
GAGTCAGTCAAACTAACAAA+CGG + chr5_2:11187658-11187677 Msa0756680:three_prime_UTR 35.0%
!! TGAATCAGAAGGGTGTTCAA+TGG + chr5_2:11184432-11184451 Msa0756680:CDS 40.0%
AAAAACTGTCTAGTGACAGG+TGG - chr5_2:11184634-11184653 None:intergenic 40.0%
GGAAAAAACTGTCTAGTGAC+AGG - chr5_2:11184637-11184656 None:intergenic 40.0%
TGATATGATAACAACGGTGG+TGG + chr5_2:11184669-11184688 Msa0756680:CDS 40.0%
! CTTCTTTTCCAAGAGCTCAT+TGG + chr5_2:11184731-11184750 Msa0756680:CDS 40.0%
! TTTTGTCAATCAGAAACCGG+TGG + chr5_2:11184766-11184785 Msa0756680:CDS 40.0%
! CGCTTCAACTATTTTACCAC+CGG - chr5_2:11184785-11184804 None:intergenic 40.0%
TCCAGAAGTTCTCAGTATAG+AGG + chr5_2:11184841-11184860 Msa0756680:intron 40.0%
ACCTCTATACTGAGAACTTC+TGG - chr5_2:11184845-11184864 None:intergenic 40.0%
TTTACAGAAGAACAGGTCGA+TGG + chr5_2:11184872-11184891 Msa0756680:intron 40.0%
TTACAGAAGAACAGGTCGAT+GGG + chr5_2:11184873-11184892 Msa0756680:intron 40.0%
TCCGTGCTTCAGAAGTAATA+TGG - chr5_2:11184927-11184946 None:intergenic 40.0%
CATCAGACACAATCCTAACA+TGG - chr5_2:11185032-11185051 None:intergenic 40.0%
TTTGGTTGTGTTTGTGATGC+AGG + chr5_2:11185160-11185179 Msa0756680:intron 40.0%
TTGGTTGTGTTTGTGATGCA+GGG + chr5_2:11185161-11185180 Msa0756680:intron 40.0%
!!! ACTGATGAGATGGTTTTGTC+TGG + chr5_2:11185366-11185385 Msa0756680:intron 40.0%
!!! CTGATGAGATGGTTTTGTCT+GGG + chr5_2:11185367-11185386 Msa0756680:intron 40.0%
TCTGGGTAAATTTGTGTAGG+TGG + chr5_2:11185384-11185403 Msa0756680:intron 40.0%
! GATTTGAAGCAGGTGAGTTA+TGG + chr5_2:11185630-11185649 Msa0756680:intron 40.0%
! TTTGAAGCAGGTGAGTTATG+GGG + chr5_2:11185632-11185651 Msa0756680:intron 40.0%
CTTTGCACAAATGTGGAAGA+TGG + chr5_2:11185835-11185854 Msa0756680:CDS 40.0%
CAAACCCAGATAAACATACC+TGG - chr5_2:11186034-11186053 None:intergenic 40.0%
TGTCACCACTGATCAATACA+TGG + chr5_2:11186476-11186495 Msa0756680:CDS 40.0%
ACATGGCACCTGAATCAAAT+TGG + chr5_2:11186493-11186512 Msa0756680:CDS 40.0%
CCATTCCTCCAATTTGATTC+AGG - chr5_2:11186504-11186523 None:intergenic 40.0%
CCTGAATCAAATTGGAGGAA+TGG + chr5_2:11186501-11186520 Msa0756680:CDS 40.0%
GAATCAAATTGGAGGAATGG+TGG + chr5_2:11186504-11186523 Msa0756680:CDS 40.0%
!! GTAACATGGATGGCTTTGTA+AGG + chr5_2:11186670-11186689 Msa0756680:CDS 40.0%
TGGCAACTGAAGATTGATGA+AGG - chr5_2:11186743-11186762 None:intergenic 40.0%
! TGCATAGATTTGGTCCCTAT+AGG + chr5_2:11186772-11186791 Msa0756680:CDS 40.0%
!! TGAGGGTGTTGTTCAATCAT+AGG - chr5_2:11186801-11186820 None:intergenic 40.0%
AAATTTGAGGGGTGAAGATG+TGG - chr5_2:11186840-11186859 None:intergenic 40.0%
GATCAACAAAAGTGGCAATC+AGG + chr5_2:11187320-11187339 Msa0756680:CDS 40.0%
!! AAGAGGGTCTTATTTGAGGT+GGG - chr5_2:11187391-11187410 None:intergenic 40.0%
!! GAAGAAGAGGGTCTTATTTG+AGG - chr5_2:11187395-11187414 None:intergenic 40.0%
ATAAGACCCTCTTCTTCTCA+AGG + chr5_2:11187398-11187417 Msa0756680:CDS 40.0%
! AAGGTTGGCTGCAGAAAAAT+GGG + chr5_2:11187417-11187436 Msa0756680:CDS 40.0%
CATCACTTCTTTCACCTCAA+TGG - chr5_2:11187598-11187617 None:intergenic 40.0%
ACCAATGAGTGTTCCCAATT+TGG - chr5_2:11187629-11187648 None:intergenic 40.0%
!! TCAGAAGGGTGTTCAATGGA+AGG + chr5_2:11184436-11184455 Msa0756680:CDS 45.0%
GATGGATCGGAAGAAGAAGA+TGG + chr5_2:11184544-11184563 Msa0756680:CDS 45.0%
TTTCCAAGAGCTCATTGGGT+TGG + chr5_2:11184736-11184755 Msa0756680:CDS 45.0%
CCTCTACGACTCTTCTTCAT+CGG - chr5_2:11184814-11184833 None:intergenic 45.0%
TACTGAGAACTTCTGGACCT+TGG - chr5_2:11184838-11184857 None:intergenic 45.0%
GTCGATGGGAGTCTCATATA+TGG + chr5_2:11184887-11184906 Msa0756680:intron 45.0%
AGAGACACGTCTGATCTTAG+AGG - chr5_2:11184952-11184971 None:intergenic 45.0%
ACGGGCGATATATCCATGTT+AGG + chr5_2:11185016-11185035 Msa0756680:intron 45.0%
TGTTTGTGATGCAGGGATTG+TGG + chr5_2:11185168-11185187 Msa0756680:intron 45.0%
!! AATTGATTTGGGAGGGAGAC+AGG + chr5_2:11185294-11185313 Msa0756680:intron 45.0%
GCAGCTCTATCATATGCACT+GGG - chr5_2:11185552-11185571 None:intergenic 45.0%
TGCAGCTCTATCATATGCAC+TGG - chr5_2:11185553-11185572 None:intergenic 45.0%
!! CAAAGCACTGGATTTCCAAG+AGG + chr5_2:11185789-11185808 Msa0756680:CDS 45.0%
GGTGTGACTTTGCACAAATG+TGG + chr5_2:11185828-11185847 Msa0756680:CDS 45.0%
GCTCGAATGGGTCAATTCTT+AGG + chr5_2:11185861-11185880 Msa0756680:CDS 45.0%
ACACTGAGATTGAAGCTGCA+AGG + chr5_2:11186058-11186077 Msa0756680:CDS 45.0%
TAACGCTGCAGACCACAATT+TGG + chr5_2:11186383-11186402 Msa0756680:CDS 45.0%
! AGGTGCCATGTATTGATCAG+TGG - chr5_2:11186484-11186503 None:intergenic 45.0%
TGGCACCTGAATCAAATTGG+AGG + chr5_2:11186496-11186515 Msa0756680:CDS 45.0%
! GAATGGTGGAATCAGACCTA+AGG + chr5_2:11186518-11186537 Msa0756680:CDS 45.0%
!! ATGGATGGCTTTGTAAGGGA+TGG + chr5_2:11186675-11186694 Msa0756680:CDS 45.0%
! GGCTTTGTAAGGGATGGATA+TGG + chr5_2:11186681-11186700 Msa0756680:CDS 45.0%
ATGGAGAGAATGAAGCCTTG+AGG + chr5_2:11186700-11186719 Msa0756680:CDS 45.0%
! AGTTTGGCTTAGCATCCTCA+AGG - chr5_2:11186718-11186737 None:intergenic 45.0%
GTTGCTAACAAATGTGGAGG+AGG - chr5_2:11187347-11187366 None:intergenic 45.0%
GCAGTTGCTAACAAATGTGG+AGG - chr5_2:11187350-11187369 None:intergenic 45.0%
GCAGCAGTTGCTAACAAATG+TGG - chr5_2:11187353-11187372 None:intergenic 45.0%
!! GAAGAGGGTCTTATTTGAGG+TGG - chr5_2:11187392-11187411 None:intergenic 45.0%
AGCCAACCTTGAGAAGAAGA+GGG - chr5_2:11187407-11187426 None:intergenic 45.0%
! CAAGGTTGGCTGCAGAAAAA+TGG + chr5_2:11187416-11187435 Msa0756680:CDS 45.0%
TGTTCAAGAGGGTCTCATGA+GGG - chr5_2:11187450-11187469 None:intergenic 45.0%
TTGTTCAAGAGGGTCTCATG+AGG - chr5_2:11187451-11187470 None:intergenic 45.0%
GCCAAATTGGGAACACTCAT+TGG + chr5_2:11187625-11187644 Msa0756680:three_prime_UTR 45.0%
!! TTTAATAATAAAAATTGATT+TGG + chr5_2:11185282-11185301 Msa0756680:intron 5.0%
!!! TTAATAATAAAAATTGATTT+GGG + chr5_2:11185283-11185302 Msa0756680:intron 5.0%
!!! AGTATATATAATAAATTTTT+TGG + chr5_2:11185516-11185535 Msa0756680:intron 5.0%
!! AATAATTAATTAAAAACTAT+AGG - chr5_2:11185688-11185707 None:intergenic 5.0%
!! TATATATTATTTAATTGAAA+GGG - chr5_2:11186125-11186144 None:intergenic 5.0%
!! TTATATATTATTTAATTGAA+AGG - chr5_2:11186126-11186145 None:intergenic 5.0%
!! ACGGTGGTGGATTCTTCTTC+CGG + chr5_2:11184682-11184701 Msa0756680:CDS 50.0%
ACACCAACCCAATGAGCTCT+TGG - chr5_2:11184742-11184761 None:intergenic 50.0%
CCGATGAAGAAGAGTCGTAG+AGG + chr5_2:11184811-11184830 Msa0756680:CDS 50.0%
AGAAGAGTCGTAGAGGACCA+AGG + chr5_2:11184818-11184837 Msa0756680:CDS 50.0%
GTACTACGACGACAAAGCAC+TGG + chr5_2:11185777-11185796 Msa0756680:CDS 50.0%
TGGAAGATGGGAAGCTCGAA+TGG + chr5_2:11185848-11185867 Msa0756680:CDS 50.0%
GGAAGATGGGAAGCTCGAAT+GGG + chr5_2:11185849-11185868 Msa0756680:CDS 50.0%
GACCCTCTTCTTCTCAAGGT+TGG + chr5_2:11187402-11187421 Msa0756680:CDS 50.0%
CAGCCAACCTTGAGAAGAAG+AGG - chr5_2:11187408-11187427 None:intergenic 50.0%
!! GTGGTGGATTCTTCTTCCGG+TGG + chr5_2:11184685-11184704 Msa0756680:CDS 55.0%
GTGGATTCTTCTTCCGGTGG+TGG + chr5_2:11184688-11184707 Msa0756680:CDS 55.0%
! GATTCTTCTTCCGGTGGTGG+TGG + chr5_2:11184691-11184710 Msa0756680:CDS 55.0%
ACACAGCACATGCAGCTGCT+CGG + chr5_2:11185412-11185431 Msa0756680:CDS 55.0%
GTTTCGAGCAGCAGCAGCAA+TGG + chr5_2:11187260-11187279 Msa0756680:CDS 55.0%
AGCAGCAATGGAGGCCGAAT+CGG + chr5_2:11187272-11187291 Msa0756680:CDS 55.0%
GCAACTGCTGCAGCATCATC+AGG + chr5_2:11187362-11187381 Msa0756680:CDS 55.0%
AAGAGGGTCTCATGAGGGTG+TGG - chr5_2:11187445-11187464 None:intergenic 55.0%
!! TCTTCTTCCGGTGGTGGTGG+TGG + chr5_2:11184694-11184713 Msa0756680:CDS 60.0%
TCGAGCAGCAGCAGCAATGG+AGG + chr5_2:11187263-11187282 Msa0756680:CDS 60.0%
!! TCTTCCGGTGGTGGTGGTGG+TGG + chr5_2:11184697-11184716 Msa0756680:CDS 65.0%
ACCACCACCACCACCACCAC+CGG - chr5_2:11184704-11184723 None:intergenic 65.0%
!! TCCGGTGGTGGTGGTGGTGG+TGG + chr5_2:11184700-11184719 Msa0756680:CDS 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG + chr5_2:11184703-11184722 Msa0756680:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 11184391 11187835 11184391 ID=Msa0756680;Name=Msa0756680
chr5_2 mRNA 11184391 11187835 11184391 ID=Msa0756680-mRNA-1;Parent=Msa0756680;Name=Msa0756680-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.88|0.9|1|1|1|10|369|491
chr5_2 exon 11184391 11184839 11184391 ID=Msa0756680-mRNA-1:exon:5023;Parent=Msa0756680-mRNA-1
chr5_2 exon 11185182 11185207 11185182 ID=Msa0756680-mRNA-1:exon:5024;Parent=Msa0756680-mRNA-1
chr5_2 exon 11185403 11185433 11185403 ID=Msa0756680-mRNA-1:exon:5025;Parent=Msa0756680-mRNA-1
chr5_2 exon 11185554 11185641 11185554 ID=Msa0756680-mRNA-1:exon:5026;Parent=Msa0756680-mRNA-1
chr5_2 exon 11185744 11185889 11185744 ID=Msa0756680-mRNA-1:exon:5027;Parent=Msa0756680-mRNA-1
chr5_2 exon 11186035 11186079 11186035 ID=Msa0756680-mRNA-1:exon:5028;Parent=Msa0756680-mRNA-1
chr5_2 exon 11186191 11186279 11186191 ID=Msa0756680-mRNA-1:exon:5029;Parent=Msa0756680-mRNA-1
chr5_2 exon 11186373 11186539 11186373 ID=Msa0756680-mRNA-1:exon:5030;Parent=Msa0756680-mRNA-1
chr5_2 exon 11186636 11186863 11186636 ID=Msa0756680-mRNA-1:exon:5031;Parent=Msa0756680-mRNA-1
chr5_2 exon 11187260 11187835 11187260 ID=Msa0756680-mRNA-1:exon:5032;Parent=Msa0756680-mRNA-1
chr5_2 CDS 11184391 11184839 11184391 ID=Msa0756680-mRNA-1:cds;Parent=Msa0756680-mRNA-1
chr5_2 CDS 11185182 11185207 11185182 ID=Msa0756680-mRNA-1:cds;Parent=Msa0756680-mRNA-1
chr5_2 CDS 11185403 11185433 11185403 ID=Msa0756680-mRNA-1:cds;Parent=Msa0756680-mRNA-1
chr5_2 CDS 11185554 11185641 11185554 ID=Msa0756680-mRNA-1:cds;Parent=Msa0756680-mRNA-1
chr5_2 CDS 11185744 11185889 11185744 ID=Msa0756680-mRNA-1:cds;Parent=Msa0756680-mRNA-1
chr5_2 CDS 11186035 11186079 11186035 ID=Msa0756680-mRNA-1:cds;Parent=Msa0756680-mRNA-1
chr5_2 CDS 11186191 11186279 11186191 ID=Msa0756680-mRNA-1:cds;Parent=Msa0756680-mRNA-1
chr5_2 CDS 11186373 11186539 11186373 ID=Msa0756680-mRNA-1:cds;Parent=Msa0756680-mRNA-1
chr5_2 CDS 11186636 11186863 11186636 ID=Msa0756680-mRNA-1:cds;Parent=Msa0756680-mRNA-1
chr5_2 CDS 11187260 11187466 11187260 ID=Msa0756680-mRNA-1:cds;Parent=Msa0756680-mRNA-1
chr5_2 three_prime_UTR 11187467 11187835 11187467 ID=Msa0756680-mRNA-1:three_prime_utr;Parent=Msa0756680-mRNA-1
Gene Sequence

>Msa0756680

ATGTGGGATCTGAATGACTCACCTGATCAGAGAAAAAACTATGAATCAGAAGGGTGTTCAATGGAAGGTGATGAAGTTGAAGTTGATGTTGATGAAAAAGGAAAAGGAGTTGGATCTGTTTCAAATTCAAGTTCATCAGCAATAGTTATAGAAGATGGATCGGAAGAAGAAGATGGTAACATGATGAAGAAAAAGAGTAGTAAGATATTTGGATTTTCAATGGATGATAGTAGTGAGTGTCCACCTGTCACTAGACAGTTTTTTCCTGTAGAGGATTCTGATATGATAACAACGGTGGTGGATTCTTCTTCCGGTGGTGGTGGTGGTGGTGGTGGAAGTTCTTCTTTTCCAAGAGCTCATTGGGTTGGTGTAAAATTTTGTCAATCAGAAACCGGTGGTAAAATAGTTGAAGCGTCACAACCGATGAAGAAGAGTCGTAGAGGACCAAGGGATTGTGGAAAACAAGTGTATTTGGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCATATGATAGAGCTGCAATTAAGTTTAGAGGAGTAGAGGCTGATATAAATTTCAATATTGAAGATTATGAAGAGGATTTGAAGCAGATGAGCAATTTAACAAAGGAAGAATTTGTGCATGTACTACGACGACAAAGCACTGGATTTCCAAGAGGAAGTTCTAAATATAGAGGTGTGACTTTGCACAAATGTGGAAGATGGGAAGCTCGAATGGGTCAATTCTTAGGAAAAAAGTATGTTTATCTGGGTTTGTTTGACACTGAGATTGAAGCTGCAAGGGCATATGATAAAGCAGCAATTAAATGCAATGGCAAAGAGGCTGTCACCAATTTTGATCCCAGCATATATGATAATGAACTTAATTCTGAATCATCAGGTAACGCTGCAGACCACAATTTGGATTTGAGTTTGGGGAATTCAAGTTCTAAATGTAGCAATAATAATCAAGCATTTGGGAATCACAACACAAATGTCACCACTGATCAATACATGGCACCTGAATCAAATTGGAGGAATGGTGGAATCAGACCTAAGCCTGTGAATATACTACCTAAACCATGTGGTATAAGTAACATGGATGGCTTTGTAAGGGATGGATATGGAGAGAATGAAGCCTTGAGGATGCTAAGCCAAACTCACCTTCATCAATCTTCAGTTGCCACTAATGAAATGCATAGATTTGGTCCCTATAGGTTACCTATGATTGAACAACACCCTCAAATGCTTCACAATTTTCCACATCTTCACCCCTCAAATTTTCATGTTTCGAGCAGCAGCAGCAATGGAGGCCGAATCGGAAGTGATTTAACATTATCAATGTCTGATCAACAAAAGTGGCAATCAGGGCCTCCTCCACATTTGTTAGCAACTGCTGCAGCATCATCAGGATTCCCACCTCAAATAAGACCCTCTTCTTCTCAAGGTTGGCTGCAGAAAAATGGGTTCCACACCCTCATGAGACCCTCTTGA
Protein sequence

>Msa0756680

MWDLNDSPDQRKNYESEGCSMEGDEVEVDVDEKGKGVGSVSNSSSSAIVIEDGSEEEDGNMMKKKSSKIFGFSMDDSSECPPVTRQFFPVEDSDMITTVVDSSSGGGGGGGGSSSFPRAHWVGVKFCQSETGGKIVEASQPMKKSRRGPRDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNSESSGNAADHNLDLSLGNSSSKCSNNNQAFGNHNTNVTTDQYMAPESNWRNGGIRPKPVNILPKPCGISNMDGFVRDGYGENEALRMLSQTHLHQSSVATNEMHRFGPYRLPMIEQHPQMLHNFPHLHPSNFHVSSSSSNGGRIGSDLTLSMSDQQKWQSGPPPHLLATAAASSGFPPQIRPSSSQGWLQKNGFHTLMRPS*