Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797970 | XP_003611692.1 | 96.887 | 514 | 11 | 3 | 1 | 512 | 1 | 511 | 0.0 | 1034 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797970 | sp|P47927|AP2_ARATH | 69.540 | 348 | 55 | 7 | 1 | 332 | 1 | 313 | 4.45e-137 | 405 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797970 | G7K5B3 | 96.887 | 514 | 11 | 3 | 1 | 512 | 1 | 511 | 0.0 | 1034 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0797970 | TF | AP2/ERF-AP2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006040 | Msa0797970 | 0.855417 | 6.398795e-62 | -8.615850e-47 |
| Msa0007440 | Msa0797970 | 0.823376 | 1.431883e-53 | -8.615850e-47 |
| Msa0054750 | Msa0797970 | 0.861563 | 9.396279e-64 | -8.615850e-47 |
| Msa0076320 | Msa0797970 | 0.801129 | 1.041750e-48 | -8.615850e-47 |
| Msa0608710 | Msa0797970 | 0.803117 | 4.063118e-49 | -8.615850e-47 |
| Msa0622100 | Msa0797970 | 0.846591 | 1.973375e-59 | -8.615850e-47 |
| Msa0661190 | Msa0797970 | -0.807738 | 4.365986e-50 | -8.615850e-47 |
| Msa0661210 | Msa0797970 | 0.863499 | 2.383654e-64 | -8.615850e-47 |
| Msa0756680 | Msa0797970 | 0.851271 | 9.895575e-61 | -8.615850e-47 |
| Msa0795920 | Msa0797970 | 0.816562 | 5.186463e-52 | -8.615850e-47 |
| Msa0797970 | Msa0984220 | -0.815613 | 8.451504e-52 | -8.615850e-47 |
| Msa0797970 | Msa1079730 | -0.810655 | 1.034833e-50 | -8.615850e-47 |
| Msa0797970 | Msa1080800 | 0.804656 | 1.945713e-49 | -8.615850e-47 |
| Msa0797970 | Msa1089040 | 0.819003 | 1.458582e-52 | -8.615850e-47 |
| Msa0797970 | Msa1124540 | -0.806288 | 8.847176e-50 | -8.615850e-47 |
| Msa0797970 | Msa1168040 | -0.803614 | 3.204820e-49 | -8.615850e-47 |
| Msa0797970 | Msa1174870 | 0.858573 | 7.508240e-63 | -8.615850e-47 |
| Msa0797970 | Msa1219810 | 0.820388 | 7.044131e-53 | -8.615850e-47 |
| Msa0797970 | Msa1234690 | 0.857427 | 1.644930e-62 | -8.615850e-47 |
| Msa0797970 | Msa1234730 | 0.865284 | 6.601652e-65 | -8.615850e-47 |
| Msa0797970 | Msa1315110 | 0.867428 | 1.378229e-65 | -8.615850e-47 |
| Msa0797970 | Msa1342100 | 0.803317 | 3.692455e-49 | -8.615850e-47 |
| Msa0797970 | Msa1348560 | 0.814046 | 1.880070e-51 | -8.615850e-47 |
| Msa0797970 | Msa1359630 | 0.857868 | 1.217409e-62 | -8.615850e-47 |
| Msa0797970 | Msa1403340 | 0.823190 | 1.582858e-53 | -8.615850e-47 |
| Msa0797970 | Msa1419960 | 0.800541 | 1.373357e-48 | -8.615850e-47 |
| Msa0797970 | Msa1437910 | 0.801397 | 9.180314e-49 | -8.615850e-47 |
| Msa0797970 | Msa1464900 | 0.810023 | 1.416461e-50 | -8.615850e-47 |
| Msa0137710 | Msa0797970 | -0.820636 | 6.178414e-53 | -8.615850e-47 |
| Msa0178800 | Msa0797970 | 0.813419 | 2.584290e-51 | -8.615850e-47 |
| Msa0217680 | Msa0797970 | 0.800095 | 1.692340e-48 | -8.615850e-47 |
| Msa0383800 | Msa0797970 | 0.819918 | 9.024075e-53 | -8.615850e-47 |
| Msa0385490 | Msa0797970 | 0.809304 | 2.021293e-50 | -8.615850e-47 |
| Msa0412840 | Msa0797970 | 0.800403 | 1.465388e-48 | -8.615850e-47 |
| Msa0457510 | Msa0797970 | 0.820516 | 6.581902e-53 | -8.615850e-47 |
| Msa0473730 | Msa0797970 | -0.810773 | 9.757158e-51 | -8.615850e-47 |
| Msa0241390 | Msa0797970 | 0.807119 | 5.905100e-50 | -8.615850e-47 |
| Msa0257500 | Msa0797970 | 0.814780 | 1.293840e-51 | -8.615850e-47 |
| Msa0265380 | Msa0797970 | 0.839417 | 1.604829e-57 | -8.615850e-47 |
| Msa0268090 | Msa0797970 | 0.829342 | 5.430497e-55 | -8.615850e-47 |
| Msa0272450 | Msa0797970 | 0.810634 | 1.045397e-50 | -8.615850e-47 |
| Msa0279240 | Msa0797970 | 0.806179 | 9.328887e-50 | -8.615850e-47 |
| Msa0303360 | Msa0797970 | 0.841439 | 4.747690e-58 | -8.615850e-47 |
| Msa0318980 | Msa0797970 | 0.810566 | 1.081583e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797970 | MtrunA17_Chr5g0401891 | 96.887 | 514 | 11 | 3 | 1 | 512 | 1 | 511 | 0.0 | 1034 |
| Msa0797970 | MtrunA17_Chr4g0053181 | 69.004 | 542 | 117 | 17 | 1 | 512 | 1 | 521 | 0.0 | 601 |
| Msa0797970 | MtrunA17_Chr7g0263581 | 70.612 | 245 | 61 | 2 | 84 | 328 | 81 | 314 | 5.52e-99 | 306 |
| Msa0797970 | MtrunA17_Chr4g0030191 | 57.864 | 337 | 102 | 8 | 1 | 328 | 1 | 306 | 2.61e-96 | 300 |
| Msa0797970 | MtrunA17_Chr2g0325911 | 73.232 | 198 | 36 | 2 | 133 | 328 | 112 | 294 | 2.06e-79 | 255 |
| Msa0797970 | MtrunA17_Chr4g0054351 | 54.971 | 171 | 66 | 3 | 150 | 309 | 310 | 480 | 1.96e-52 | 188 |
| Msa0797970 | MtrunA17_Chr1g0170761 | 44.333 | 300 | 121 | 11 | 40 | 328 | 34 | 298 | 4.76e-52 | 181 |
| Msa0797970 | MtrunA17_Chr4g0072291 | 55.030 | 169 | 65 | 3 | 150 | 307 | 159 | 327 | 3.97e-51 | 182 |
| Msa0797970 | MtrunA17_Chr5g0400871 | 54.386 | 171 | 67 | 3 | 150 | 309 | 249 | 419 | 4.51e-51 | 182 |
| Msa0797970 | MtrunA17_Chr7g0216601 | 51.412 | 177 | 75 | 2 | 150 | 315 | 65 | 241 | 6.06e-51 | 179 |
| Msa0797970 | MtrunA17_Chr7g0249621 | 51.031 | 194 | 83 | 4 | 133 | 315 | 243 | 435 | 9.88e-51 | 184 |
| Msa0797970 | MtrunA17_Chr4g0032631 | 48.469 | 196 | 87 | 5 | 125 | 307 | 137 | 331 | 1.94e-50 | 181 |
| Msa0797970 | MtrunA17_Chr3g0135161 | 54.167 | 168 | 69 | 3 | 150 | 309 | 310 | 477 | 4.49e-49 | 179 |
| Msa0797970 | MtrunA17_Chr3g0135161 | 47.297 | 74 | 37 | 1 | 151 | 222 | 410 | 483 | 1.64e-11 | 67.0 |
| Msa0797970 | MtrunA17_Chr3g0126151 | 79.787 | 94 | 19 | 0 | 191 | 284 | 47 | 140 | 6.83e-49 | 165 |
| Msa0797970 | MtrunA17_Chr8g0355191 | 50.259 | 193 | 79 | 4 | 137 | 315 | 39 | 228 | 2.09e-48 | 172 |
| Msa0797970 | MtrunA17_Chr8g0355191 | 46.154 | 78 | 40 | 1 | 152 | 227 | 156 | 233 | 2.48e-11 | 65.9 |
| Msa0797970 | MtrunA17_Chr1g0152161 | 52.976 | 168 | 71 | 3 | 150 | 309 | 312 | 479 | 1.32e-47 | 175 |
| Msa0797970 | MtrunA17_Chr8g0343851 | 53.012 | 166 | 70 | 3 | 150 | 307 | 248 | 413 | 3.39e-47 | 172 |
| Msa0797970 | MtrunA17_Chr2g0328971 | 49.462 | 186 | 80 | 4 | 133 | 307 | 150 | 332 | 6.69e-47 | 171 |
| Msa0797970 | MtrunA17_Chr4g0002011 | 49.528 | 212 | 89 | 5 | 144 | 344 | 30 | 234 | 8.19e-47 | 166 |
| Msa0797970 | MtrunA17_Chr6g0452911 | 49.162 | 179 | 73 | 4 | 154 | 314 | 65 | 243 | 1.42e-45 | 164 |
| Msa0797970 | MtrunA17_Chr4g0073521 | 50.292 | 171 | 77 | 3 | 144 | 306 | 41 | 211 | 2.21e-45 | 162 |
| Msa0797970 | MtrunA17_Chr8g0355181 | 50.838 | 179 | 80 | 2 | 140 | 310 | 46 | 224 | 9.16e-44 | 159 |
| Msa0797970 | MtrunA17_Chr8g0355181 | 46.753 | 77 | 39 | 2 | 152 | 226 | 157 | 233 | 1.19e-11 | 66.6 |
| Msa0797970 | MtrunA17_Chr5g0412151 | 53.107 | 177 | 72 | 3 | 150 | 315 | 224 | 400 | 5.93e-43 | 159 |
| Msa0797970 | MtrunA17_Chr8g0367311 | 55.970 | 134 | 58 | 1 | 177 | 309 | 19 | 152 | 2.00e-42 | 151 |
| Msa0797970 | MtrunA17_Chr8g0367311 | 35.965 | 114 | 68 | 3 | 107 | 217 | 43 | 154 | 6.13e-11 | 62.8 |
| Msa0797970 | MtrunA17_Chr8g0362541 | 46.040 | 202 | 86 | 4 | 128 | 306 | 46 | 247 | 2.70e-39 | 147 |
| Msa0797970 | MtrunA17_Chr7g0257361 | 44.654 | 159 | 72 | 3 | 121 | 269 | 30 | 182 | 7.99e-25 | 106 |
| Msa0797970 | MtrunA17_Chr2g0305821 | 43.511 | 131 | 62 | 3 | 134 | 252 | 26 | 156 | 1.19e-18 | 83.2 |
| Msa0797970 | MtrunA17_Chr2g0305831 | 60.000 | 55 | 22 | 0 | 252 | 306 | 5 | 59 | 1.08e-13 | 70.1 |
| Msa0797970 | MtrunA17_Chr8g0375031 | 46.914 | 81 | 38 | 3 | 153 | 229 | 124 | 203 | 2.35e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797970 | AT4G36920.1 | 69.540 | 348 | 55 | 7 | 1 | 332 | 1 | 313 | 4.52e-138 | 405 |
| Msa0797970 | AT4G36920.2 | 69.540 | 348 | 55 | 7 | 1 | 332 | 1 | 313 | 4.52e-138 | 405 |
| Msa0797970 | AT5G67180.1 | 59.706 | 340 | 66 | 8 | 1 | 333 | 1 | 276 | 3.86e-105 | 318 |
| Msa0797970 | AT5G67180.2 | 59.706 | 340 | 66 | 8 | 1 | 333 | 1 | 276 | 4.95e-105 | 316 |
| Msa0797970 | AT5G67180.3 | 60.191 | 314 | 58 | 6 | 1 | 309 | 1 | 252 | 3.57e-99 | 300 |
| Msa0797970 | AT2G28550.3 | 59.740 | 308 | 85 | 6 | 41 | 327 | 38 | 327 | 6.62e-95 | 296 |
| Msa0797970 | AT5G67180.4 | 57.931 | 290 | 55 | 6 | 1 | 285 | 1 | 228 | 3.36e-81 | 253 |
| Msa0797970 | AT2G28550.1 | 55.844 | 308 | 82 | 7 | 41 | 327 | 38 | 312 | 3.51e-80 | 257 |
| Msa0797970 | AT2G28550.4 | 59.091 | 264 | 69 | 6 | 41 | 283 | 38 | 283 | 2.01e-76 | 244 |
| Msa0797970 | AT2G28550.2 | 57.831 | 249 | 66 | 6 | 41 | 268 | 38 | 268 | 3.67e-66 | 215 |
| Msa0797970 | AT2G28550.6 | 57.831 | 249 | 66 | 6 | 41 | 268 | 38 | 268 | 3.67e-66 | 215 |
| Msa0797970 | AT5G60120.4 | 44.477 | 344 | 153 | 9 | 1 | 332 | 1 | 318 | 5.40e-63 | 211 |
| Msa0797970 | AT5G60120.3 | 44.477 | 344 | 153 | 9 | 1 | 332 | 1 | 318 | 5.40e-63 | 211 |
| Msa0797970 | AT5G60120.5 | 44.477 | 344 | 153 | 9 | 1 | 332 | 1 | 318 | 5.40e-63 | 211 |
| Msa0797970 | AT5G60120.6 | 44.767 | 344 | 152 | 9 | 1 | 332 | 1 | 318 | 2.13e-62 | 211 |
| Msa0797970 | AT5G60120.2 | 44.767 | 344 | 152 | 9 | 1 | 332 | 1 | 318 | 3.07e-62 | 212 |
| Msa0797970 | AT5G60120.1 | 44.767 | 344 | 152 | 9 | 1 | 332 | 1 | 318 | 3.49e-62 | 211 |
| Msa0797970 | AT2G28550.5 | 66.467 | 167 | 41 | 1 | 170 | 336 | 4 | 155 | 3.72e-58 | 194 |
| Msa0797970 | AT5G57390.2 | 43.165 | 278 | 121 | 7 | 81 | 332 | 22 | 288 | 3.54e-53 | 186 |
| Msa0797970 | AT5G57390.1 | 43.165 | 278 | 121 | 7 | 81 | 332 | 140 | 406 | 2.84e-52 | 186 |
| Msa0797970 | AT1G51190.1 | 51.053 | 190 | 80 | 4 | 129 | 307 | 168 | 355 | 8.74e-52 | 185 |
| Msa0797970 | AT1G72570.1 | 51.351 | 185 | 78 | 4 | 134 | 307 | 205 | 388 | 4.61e-51 | 180 |
| Msa0797970 | AT4G37750.1 | 45.701 | 221 | 104 | 4 | 150 | 354 | 280 | 500 | 1.17e-50 | 182 |
| Msa0797970 | AT4G37750.1 | 43.529 | 85 | 46 | 1 | 140 | 222 | 372 | 456 | 3.33e-11 | 66.2 |
| Msa0797970 | AT3G20840.1 | 48.969 | 194 | 87 | 4 | 133 | 315 | 162 | 354 | 1.48e-49 | 179 |
| Msa0797970 | AT2G39250.1 | 54.404 | 193 | 58 | 5 | 141 | 332 | 96 | 259 | 1.77e-48 | 170 |
| Msa0797970 | AT5G17430.2 | 48.454 | 194 | 87 | 4 | 125 | 307 | 122 | 313 | 1.91e-48 | 175 |
| Msa0797970 | AT5G17430.1 | 48.454 | 194 | 87 | 4 | 125 | 307 | 184 | 375 | 2.54e-48 | 176 |
| Msa0797970 | AT2G39250.2 | 76.636 | 107 | 25 | 0 | 141 | 247 | 96 | 202 | 4.38e-47 | 164 |
| Msa0797970 | AT3G54990.2 | 65.734 | 143 | 42 | 1 | 117 | 259 | 93 | 228 | 8.48e-44 | 155 |
| Msa0797970 | AT3G54320.3 | 53.488 | 172 | 69 | 2 | 150 | 310 | 62 | 233 | 9.90e-44 | 160 |
| Msa0797970 | AT3G54320.1 | 53.488 | 172 | 69 | 2 | 150 | 310 | 62 | 233 | 1.07e-43 | 160 |
| Msa0797970 | AT3G54990.1 | 58.757 | 177 | 52 | 3 | 117 | 293 | 93 | 248 | 1.24e-43 | 158 |
| Msa0797970 | AT5G65510.4 | 46.341 | 246 | 99 | 7 | 150 | 379 | 170 | 398 | 1.58e-43 | 160 |
| Msa0797970 | AT5G65510.2 | 46.341 | 246 | 99 | 7 | 150 | 379 | 228 | 456 | 4.06e-43 | 160 |
| Msa0797970 | AT5G65510.1 | 46.341 | 246 | 99 | 7 | 150 | 379 | 228 | 456 | 4.06e-43 | 160 |
| Msa0797970 | AT5G10510.7 | 50.761 | 197 | 82 | 5 | 150 | 332 | 227 | 422 | 1.29e-41 | 157 |
| Msa0797970 | AT5G10510.5 | 50.761 | 197 | 82 | 5 | 150 | 332 | 227 | 422 | 1.29e-41 | 157 |
| Msa0797970 | AT5G10510.6 | 50.761 | 197 | 82 | 5 | 150 | 332 | 265 | 460 | 1.80e-41 | 157 |
| Msa0797970 | AT5G10510.4 | 50.761 | 197 | 82 | 5 | 150 | 332 | 265 | 460 | 1.80e-41 | 157 |
| Msa0797970 | AT5G10510.1 | 50.761 | 197 | 82 | 5 | 150 | 332 | 250 | 445 | 1.87e-41 | 157 |
| Msa0797970 | AT1G79700.2 | 51.596 | 188 | 77 | 3 | 144 | 320 | 43 | 227 | 1.27e-39 | 146 |
| Msa0797970 | AT5G65510.3 | 51.825 | 137 | 55 | 3 | 150 | 275 | 170 | 306 | 2.02e-38 | 143 |
| Msa0797970 | AT1G16060.1 | 50.000 | 192 | 85 | 2 | 126 | 306 | 31 | 222 | 1.38e-37 | 141 |
| Msa0797970 | AT5G10510.2 | 48.969 | 194 | 87 | 5 | 150 | 332 | 227 | 419 | 2.12e-37 | 145 |
| Msa0797970 | AT5G10510.3 | 44.700 | 217 | 85 | 6 | 150 | 332 | 265 | 480 | 7.68e-35 | 138 |
| Msa0797970 | AT1G79700.1 | 48.936 | 188 | 72 | 4 | 144 | 320 | 43 | 217 | 1.80e-32 | 126 |
| Msa0797970 | AT3G54320.4 | 54.074 | 135 | 61 | 1 | 177 | 310 | 33 | 167 | 2.85e-32 | 127 |
| Msa0797970 | AT3G54320.5 | 54.074 | 135 | 61 | 1 | 177 | 310 | 33 | 167 | 2.85e-32 | 127 |
| Msa0797970 | AT1G79700.3 | 52.000 | 150 | 68 | 2 | 172 | 320 | 5 | 151 | 2.18e-28 | 113 |
| Msa0797970 | AT1G16060.3 | 55.147 | 136 | 60 | 1 | 172 | 306 | 17 | 152 | 7.32e-27 | 110 |
| Msa0797970 | AT1G79700.4 | 51.748 | 143 | 65 | 2 | 179 | 320 | 6 | 145 | 5.19e-26 | 106 |
| Msa0797970 | AT2G41710.1 | 44.654 | 159 | 72 | 3 | 121 | 269 | 40 | 192 | 1.74e-24 | 106 |
| Msa0797970 | AT2G41710.4 | 44.654 | 159 | 72 | 3 | 121 | 269 | 40 | 192 | 2.07e-24 | 106 |
| Msa0797970 | AT2G41710.2 | 43.293 | 164 | 72 | 4 | 121 | 269 | 40 | 197 | 2.41e-22 | 99.8 |
| Msa0797970 | AT3G54320.2 | 58.696 | 92 | 37 | 1 | 220 | 310 | 1 | 92 | 7.21e-20 | 90.5 |
| Msa0797970 | AT2G41710.3 | 46.667 | 120 | 50 | 2 | 160 | 269 | 112 | 227 | 1.45e-19 | 91.7 |
| Msa0797970 | AT1G16060.2 | 57.955 | 88 | 36 | 1 | 220 | 306 | 1 | 88 | 8.76e-18 | 82.4 |
| Msa0797970 | AT1G16060.4 | 57.955 | 88 | 36 | 1 | 220 | 306 | 1 | 88 | 8.76e-18 | 82.4 |
| Msa0797970 | AT1G16060.6 | 57.955 | 88 | 36 | 1 | 220 | 306 | 1 | 88 | 8.76e-18 | 82.4 |
| Msa0797970 | AT1G16060.5 | 57.955 | 88 | 36 | 1 | 220 | 306 | 1 | 88 | 8.76e-18 | 82.4 |
Find 144 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTACCAGGTATGTTTATC+TGG | 0.164819 | 5_3:-10384074 | Msa0797970:intron |
| TTGTGGAAAACAAGTGTATT+TGG | 0.188508 | 5_3:-10384912 | Msa0797970:CDS |
| ACCAATGAGTGTTCCCAATT+TGG | 0.196957 | 5_3:+10382424 | None:intergenic |
| CACAATTTGGATTTGAGTTT+GGG | 0.208325 | 5_3:-10383708 | Msa0797970:CDS |
| TATGCTCTATTGGGCAGTTT+AGG | 0.219491 | 5_3:-10385897 | Msa0797970:five_prime_UTR |
| ATTTAAATGTGAATTTAAAA+TGG | 0.226076 | 5_3:+10382544 | None:intergenic |
| GTGATAAAAGTAAGCCAAAT+TGG | 0.232972 | 5_3:-10382438 | Msa0797970:three_prime_UTR |
| CCATTCCGCCAATTTGATTC+AGG | 0.238529 | 5_3:+10383603 | None:intergenic |
| CCACAATTTGGATTTGAGTT+TGG | 0.249484 | 5_3:-10383709 | Msa0797970:CDS |
| ATGCTCTATTGGGCAGTTTA+GGG | 0.255519 | 5_3:-10385896 | Msa0797970:five_prime_UTR |
| TTGCCTCGTCTATGCTCTAT+TGG | 0.280376 | 5_3:-10385907 | Msa0797970:five_prime_UTR |
| AGCAATAATAATCAAGCATT+TGG | 0.287575 | 5_3:-10383666 | Msa0797970:CDS |
| ATATATGCTGGGATCAAAAT+TGG | 0.291483 | 5_3:+10383863 | None:intergenic |
| TAACGCTGCAGACCACAATT+TGG | 0.304218 | 5_3:-10383721 | Msa0797970:CDS |
| TATGATAATGAACTTAATTC+TGG | 0.336630 | 5_3:-10383843 | Msa0797970:intron |
| CTACTACATAGATATTATTC+TGG | 0.339780 | 5_3:-10382335 | Msa0797970:three_prime_UTR |
| GAAGTTGATGTTGATGAAAA+AGG | 0.344176 | 5_3:-10385628 | Msa0797970:CDS |
| AAATCTATGCATTTCATTAG+TGG | 0.352170 | 5_3:+10383343 | None:intergenic |
| GCTCGAATGGGTCAATTCTT+AGG | 0.356813 | 5_3:-10384239 | Msa0797970:CDS |
| ACATGGCACCTGAATCAAAT+TGG | 0.356848 | 5_3:-10383611 | Msa0797970:CDS |
| AGAGCTGCAATTAAGTTTAG+AGG | 0.359998 | 5_3:-10384536 | Msa0797970:CDS |
| TGAGGGTGTTGTTCAATCAT+AGG | 0.361856 | 5_3:+10383305 | None:intergenic |
| TGTGGAAAACAAGTGTATTT+GGG | 0.366345 | 5_3:-10384911 | Msa0797970:intron |
| GAAGAAGAGGGTCTTATTTG+AGG | 0.370931 | 5_3:+10382658 | None:intergenic |
| TTACTTATACCACATGGTTT+AGG | 0.372438 | 5_3:+10383452 | None:intergenic |
| GATCAACAAAAGTGGCAATC+AGG | 0.378821 | 5_3:-10382730 | Msa0797970:CDS |
| AAGATTGATGAAGGTGAGTT+TGG | 0.381267 | 5_3:+10383372 | None:intergenic |
| ACGGTGGTGGATTCTTCTTC+CGG | 0.386725 | 5_3:-10385415 | Msa0797970:CDS |
| ACCTCTATACTGAGAACTTC+TGG | 0.388412 | 5_3:+10385261 | None:intergenic |
| TATTATTGTTCATCTTGTTA+AGG | 0.398825 | 5_3:-10385761 | Msa0797970:five_prime_UTR |
| TTCAATCATAGGTAACCTAT+AGG | 0.401676 | 5_3:+10383316 | None:intergenic |
| ACTAATGAAATGCATAGATT+TGG | 0.402036 | 5_3:-10383341 | Msa0797970:CDS |
| TCACCTCAATGGTAAAGTTA+TGG | 0.404672 | 5_3:+10382466 | None:intergenic |
| GCCAAATTGGGAACACTCAT+TGG | 0.407648 | 5_3:-10382425 | Msa0797970:three_prime_UTR |
| GGCTTTGTAAGGGATGGATA+TGG | 0.410468 | 5_3:-10383422 | Msa0797970:CDS |
| GTGGATTCTTCTTCCGGTGG+TGG | 0.421531 | 5_3:-10385409 | Msa0797970:CDS |
| TCTTCTTCCGGTGGTGGTGG+TGG | 0.422476 | 5_3:-10385403 | Msa0797970:CDS |
| GTCGATGGGAGTCTCATATA+TGG | 0.422592 | 5_3:-10385216 | Msa0797970:intron |
| AAGTTCATTATCATATATGC+TGG | 0.427130 | 5_3:+10383851 | None:intergenic |
| CTATATTTAGAACTTCCTCT+TGG | 0.428532 | 5_3:+10384296 | None:intergenic |
| TATCACTTCTTTCACCTCAA+TGG | 0.428767 | 5_3:+10382455 | None:intergenic |
| GCAATAATAATCAAGCATTT+GGG | 0.440075 | 5_3:-10383665 | Msa0797970:CDS |
| AGAGTGAGAGAGAACATTGA+AGG | 0.443758 | 5_3:-10386983 | Msa0797970:five_prime_UTR |
| ACACCAACCCAATGAGCTCT+TGG | 0.445124 | 5_3:+10385364 | None:intergenic |
| TCTTCCGGTGGTGGTGGTGG+TGG | 0.447429 | 5_3:-10385400 | Msa0797970:CDS |
| ATGTTAAATCACTTCCGATT+CGG | 0.449101 | 5_3:+10382764 | None:intergenic |
| GCAACTGCTGCAGCATCATC+AGG | 0.454716 | 5_3:-10382688 | Msa0797970:CDS |
| GTGGTGTATGTATGTGTCTA+TGG | 0.455321 | 5_3:-10387021 | Msa0797970:five_prime_UTR |
| GGAAAATTGTGAAGCATTTG+AGG | 0.458096 | 5_3:+10383287 | None:intergenic |
| AAGAGGGTCTTATTTGAGGT+GGG | 0.458874 | 5_3:+10382662 | None:intergenic |
| TGATAAAAGTAAGCCAAATT+GGG | 0.460337 | 5_3:-10382437 | Msa0797970:three_prime_UTR |
| TGCCTCGTCTATGCTCTATT+GGG | 0.462554 | 5_3:-10385906 | Msa0797970:five_prime_UTR |
| GATTCTTCTTCCGGTGGTGG+TGG | 0.465665 | 5_3:-10385406 | Msa0797970:CDS |
| TGCATAGATTTGGTCCCTAT+AGG | 0.465996 | 5_3:-10383331 | Msa0797970:CDS |
| GTTTCGAGCAGCAGCAGCAA+TGG | 0.467071 | 5_3:-10382790 | Msa0797970:CDS |
| AGCAGCAATGGAGGCCGAAT+CGG | 0.467356 | 5_3:-10382778 | Msa0797970:CDS |
| GTAACATGGATGGCTTTGTA+AGG | 0.467763 | 5_3:-10383433 | Msa0797970:CDS |
| TTATGAAGAGGATTTGAAGC+AGG | 0.468923 | 5_3:-10384480 | Msa0797970:intron |
| TGTTTGTGATGCAGGGATTG+TGG | 0.469882 | 5_3:-10384929 | Msa0797970:intron |
| GACCCTCTTCTTCTCAAGGT+TGG | 0.474676 | 5_3:-10382648 | Msa0797970:CDS |
| TTTACCAGGTATGTTTATCT+GGG | 0.478888 | 5_3:-10384073 | Msa0797970:intron |
| TCAGCAATAGTTATAGAAGA+TGG | 0.485881 | 5_3:-10385571 | Msa0797970:CDS |
| GAAGAGGGTCTTATTTGAGG+TGG | 0.487844 | 5_3:+10382661 | None:intergenic |
| TCAATCATAGGTAACCTATA+GGG | 0.489373 | 5_3:+10383317 | None:intergenic |
| TTTCCAAGAGCTCATTGGGT+TGG | 0.496635 | 5_3:-10385367 | Msa0797970:CDS |
| TGGAAGATGGGAAGCTCGAA+TGG | 0.497218 | 5_3:-10384252 | Msa0797970:CDS |
| AGTACTCACATGAAAATTTG+AGG | 0.498999 | 5_3:+10383253 | None:intergenic |
| CCTCTACGACTCTTCTTCAT+CGG | 0.503225 | 5_3:+10385292 | None:intergenic |
| ATCATCTCAGAATCCTCTAC+AGG | 0.512148 | 5_3:+10385442 | None:intergenic |
| ATCAACAAAAGTGGCAATCA+GGG | 0.513697 | 5_3:-10382729 | Msa0797970:CDS |
| TCCAGAAGTTCTCAGTATAG+AGG | 0.521024 | 5_3:-10385262 | Msa0797970:CDS |
| CAATGTCTGATCAACAAAAG+TGG | 0.521031 | 5_3:-10382738 | Msa0797970:CDS |
| GTACTCACATGAAAATTTGA+GGG | 0.522748 | 5_3:+10383254 | None:intergenic |
| AATGTGAATTTAAAATGGCA+AGG | 0.523528 | 5_3:+10382549 | None:intergenic |
| TGAATCAGAAGGGTGTTCAA+TGG | 0.523804 | 5_3:-10385665 | Msa0797970:CDS |
| AGTTGAGATAGAGAAGAATG+TGG | 0.524564 | 5_3:-10385723 | Msa0797970:exon |
| AAACCATAACTTTACCATTG+AGG | 0.527878 | 5_3:-10382469 | Msa0797970:three_prime_UTR |
| AGAGGAAGTTCTAAATATAG+AGG | 0.528159 | 5_3:-10384293 | Msa0797970:CDS |
| ATTAATGTTGTTGTTCAAGA+GGG | 0.529810 | 5_3:+10382592 | None:intergenic |
| ATAAGACCCTCTTCTTCTCA+AGG | 0.535452 | 5_3:-10382652 | Msa0797970:CDS |
| TATTAAATGACAGAATCATC+AGG | 0.536179 | 5_3:-10383744 | Msa0797970:intron |
| CCTGAATCAAATTGGCGGAA+TGG | 0.543236 | 5_3:-10383603 | Msa0797970:CDS |
| ATGGATGGCTTTGTAAGGGA+TGG | 0.546373 | 5_3:-10383428 | Msa0797970:CDS |
| GTTGCTAACAAATGTGGAGG+AGG | 0.549490 | 5_3:+10382706 | None:intergenic |
| GTACTACGACGACAAAGCAC+TGG | 0.549832 | 5_3:-10384323 | Msa0797970:CDS |
| TGAGATGATAACAACGGTGG+TGG | 0.552175 | 5_3:-10385428 | Msa0797970:CDS |
| AGTTTGGCTTAGCATCCTCA+AGG | 0.553874 | 5_3:+10383388 | None:intergenic |
| TTGTTCAAGAGGGTCTCATG+AGG | 0.554656 | 5_3:+10382602 | None:intergenic |
| AAAGCAGCAATTAAATGCAA+TGG | 0.555160 | 5_3:-10383900 | Msa0797970:CDS |
| CTTTGCATAAATGTGGAAGA+TGG | 0.555605 | 5_3:-10384265 | Msa0797970:CDS |
| GAATCAAATTGGCGGAATGG+TGG | 0.556618 | 5_3:-10383600 | Msa0797970:CDS |
| TTTACAGAAGAACAGGTCGA+TGG | 0.557696 | 5_3:-10385231 | Msa0797970:CDS |
| AAGAGGGTCTCATGAGGGTG+TGG | 0.558814 | 5_3:+10382608 | None:intergenic |
| GAGTCAGTCAAACTAACAAA+CGG | 0.559729 | 5_3:-10382392 | Msa0797970:three_prime_UTR |
| GATGGATCGGAAGAAGAAGA+TGG | 0.559991 | 5_3:-10385553 | Msa0797970:CDS |
| CAGCCAACCTTGAGAAGAAG+AGG | 0.562311 | 5_3:+10382645 | None:intergenic |
| CAATATTGAAGATTATGAAG+AGG | 0.562600 | 5_3:-10384492 | Msa0797970:CDS |
| GAAAATTGTGAAGCATTTGA+GGG | 0.565877 | 5_3:+10383288 | None:intergenic |
| TACTGAGAACTTCTGGACCT+TGG | 0.566561 | 5_3:+10385268 | None:intergenic |
| AATTAAGTTTAGAGGAGTAG+AGG | 0.566590 | 5_3:-10384528 | Msa0797970:CDS |
| TCGAGCAGCAGCAGCAATGG+AGG | 0.568082 | 5_3:-10382787 | Msa0797970:CDS |
| AATTAATGTTGTTGTTCAAG+AGG | 0.570734 | 5_3:+10382591 | None:intergenic |
| TTACAGAAGAACAGGTCGAT+GGG | 0.571585 | 5_3:-10385230 | Msa0797970:CDS |
| AGTTCATTATCATATATGCT+GGG | 0.572364 | 5_3:+10383852 | None:intergenic |
| GTTGAGATAGAGAAGAATGT+GGG | 0.573193 | 5_3:-10385722 | Msa0797970:exon |
| TGTTCAAGAGGGTCTCATGA+GGG | 0.574371 | 5_3:+10382603 | None:intergenic |
| GGTTTAGGTAGTATATTCAC+AGG | 0.579088 | 5_3:+10383467 | None:intergenic |
| TAACATGGATGGCTTTGTAA+GGG | 0.583711 | 5_3:-10383432 | Msa0797970:CDS |
| TTTGCATAAATGTGGAAGAT+GGG | 0.585453 | 5_3:-10384264 | Msa0797970:CDS |
| AATAGTTATAGAAGATGGAT+CGG | 0.593835 | 5_3:-10385566 | Msa0797970:CDS |
| TCAGAAGGGTGTTCAATGGA+AGG | 0.596722 | 5_3:-10385661 | Msa0797970:CDS |
| TTAGATGAGCAATTTAACAA+AGG | 0.599726 | 5_3:-10384360 | Msa0797970:intron |
| GGAAGATGGGAAGCTCGAAT+GGG | 0.600193 | 5_3:-10384251 | Msa0797970:CDS |
| TGAATGACTCACCTGATCAG+AGG | 0.601123 | 5_3:-10385696 | Msa0797970:CDS |
| GTGGTGGATTCTTCTTCCGG+TGG | 0.601398 | 5_3:-10385412 | Msa0797970:CDS |
| TGGCACCTGAATCAAATTGG+CGG | 0.606044 | 5_3:-10383608 | Msa0797970:CDS |
| GAATGGTGGAATCAGACCTA+AGG | 0.607230 | 5_3:-10383586 | Msa0797970:intron |
| ACCATGTGGTATAAGTAACA+TGG | 0.608746 | 5_3:-10383447 | Msa0797970:CDS |
| ACACAGCACATGCAGCTGCT+CGG | 0.611926 | 5_3:-10384688 | Msa0797970:intron |
| CCAAACTCAAATCCAAATTG+TGG | 0.612263 | 5_3:+10383709 | None:intergenic |
| TCCATGTTACTTATACCACA+TGG | 0.613151 | 5_3:+10383446 | None:intergenic |
| TGTCACCACTGATCAATACA+TGG | 0.617546 | 5_3:-10383628 | Msa0797970:CDS |
| ACACTGAGATTGAAGCTGCA+AGG | 0.619137 | 5_3:-10384042 | Msa0797970:intron |
| AATTAAATGCAATGGCAAAG+AGG | 0.621562 | 5_3:-10383892 | Msa0797970:CDS |
| ACAATTTGGATTTGAGTTTG+GGG | 0.624070 | 5_3:-10383707 | Msa0797970:CDS |
| AAATTTGAGGGGTGAAGATG+TGG | 0.624965 | 5_3:+10383266 | None:intergenic |
| AGCCAACCTTGAGAAGAAGA+GGG | 0.638756 | 5_3:+10382646 | None:intergenic |
| TACATAGAAAGAGAAACAAG+TGG | 0.642246 | 5_3:-10387040 | Msa0797970:five_prime_UTR |
| TGAGCATGTACAAATGAATG+CGG | 0.642805 | 5_3:-10382506 | Msa0797970:three_prime_UTR |
| GCAGCAGTTGCTAACAAATG+TGG | 0.642916 | 5_3:+10382700 | None:intergenic |
| GGTGTGACTTTGCATAAATG+TGG | 0.644722 | 5_3:-10384272 | Msa0797970:CDS |
| ATGGAGAGAATGAAGCCTTG+AGG | 0.645373 | 5_3:-10383403 | Msa0797970:CDS |
| TGGCAACTGAAGATTGATGA+AGG | 0.653404 | 5_3:+10383363 | None:intergenic |
| GCAGTTGCTAACAAATGTGG+AGG | 0.654906 | 5_3:+10382703 | None:intergenic |
| TGTGGTATAAGTAACATGGA+TGG | 0.657805 | 5_3:-10383443 | Msa0797970:CDS |
| AGAAGAGTCGTAGAGGACCA+AGG | 0.658620 | 5_3:-10385285 | Msa0797970:CDS |
| TACTCACATGAAAATTTGAG+GGG | 0.661433 | 5_3:+10383255 | None:intergenic |
| CCGATGAAGAAGAGTCGTAG+AGG | 0.674974 | 5_3:-10385292 | Msa0797970:CDS |
| CAAAGCACTGGATTTCCAAG+AGG | 0.688369 | 5_3:-10384311 | Msa0797970:CDS |
| AGGTGCCATGTATTGATCAG+TGG | 0.699263 | 5_3:+10383623 | None:intergenic |
| TTCTGAGATGATAACAACGG+TGG | 0.706902 | 5_3:-10385431 | Msa0797970:CDS |
| AATATACTACCTAAACCATG+TGG | 0.721947 | 5_3:-10383461 | Msa0797970:CDS |
| GGATTCTGAGATGATAACAA+CGG | 0.722167 | 5_3:-10385434 | Msa0797970:CDS |
| TGCCCAATAGAGCATAGACG+AGG | 0.736824 | 5_3:+10385904 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATTATTATGGATTTA+TGG | + | chr5_3:10382720-10382739 | None:intergenic | 10.0% |
| !! | TTATTATCTATTTCATTTAT+AGG | + | chr5_3:10385302-10385321 | None:intergenic | 10.0% |
| !! | AAAAATTAATCAATAGAATA+AGG | + | chr5_3:10385896-10385915 | None:intergenic | 10.0% |
| !! | ATTTAAATGTGAATTTAAAA+TGG | + | chr5_3:10386881-10386900 | None:intergenic | 10.0% |
| !! | ATAACTAGCTATTTATTATT+TGG | - | chr5_3:10384435-10384454 | Msa0797970:intron | 15.0% |
| !!! | TATGAATTTGAATGTTTTTT+TGG | - | chr5_3:10384467-10384486 | Msa0797970:intron | 15.0% |
| !!! | AAATTTCATTCATTCTTTTA+TGG | - | chr5_3:10384784-10384803 | Msa0797970:intron | 15.0% |
| !! | TATACTAAATATATGTATGT+AGG | + | chr5_3:10384824-10384843 | None:intergenic | 15.0% |
| !!! | ATGAATATGTTCAATTTTAA+AGG | - | chr5_3:10386380-10386399 | Msa0797970:intron | 15.0% |
| !! | AGAATCTGTAGTTTAAAAAA+TGG | + | chr5_3:10382866-10382885 | None:intergenic | 20.0% |
| !!! | ATTTTGCTATTAATTTGCTT+TGG | - | chr5_3:10382958-10382977 | Msa0797970:intron | 20.0% |
| !! | TATTATTGTTCATCTTGTTA+AGG | - | chr5_3:10383661-10383680 | Msa0797970:CDS | 20.0% |
| !! | AAAAAGAGTAGTAAGATATT+TGG | - | chr5_3:10383905-10383924 | Msa0797970:CDS | 20.0% |
| !!! | TAAGATATTTGGATTTTCAA+TGG | - | chr5_3:10383916-10383935 | Msa0797970:intron | 20.0% |
| !!! | ATAATAAAAATTGATTTGGG+AGG | - | chr5_3:10384606-10384625 | Msa0797970:intron | 20.0% |
| !!! | TAATAAAAATTGATTTGGGA+GGG | - | chr5_3:10384607-10384626 | Msa0797970:intron | 20.0% |
| !! | TATATTGTGAAGAAGATTTA+AGG | - | chr5_3:10384661-10384680 | Msa0797970:intron | 20.0% |
| !! | ATATTGTGAAGAAGATTTAA+GGG | - | chr5_3:10384662-10384681 | Msa0797970:intron | 20.0% |
| !!! | TATGATAATGAACTTAATTC+TGG | - | chr5_3:10385579-10385598 | Msa0797970:CDS | 20.0% |
| !! | AATTACATTACATTTACCTT+AGG | + | chr5_3:10385855-10385874 | None:intergenic | 20.0% |
| !! | ATTAATCAATAGAATAAGGT+TGG | + | chr5_3:10385892-10385911 | None:intergenic | 20.0% |
| !! | TACTTAAAATTGTACTTGTA+TGG | - | chr5_3:10386256-10386275 | Msa0797970:intron | 20.0% |
| !! | TTGAATTGAAATGATTATGA+AGG | - | chr5_3:10386610-10386629 | Msa0797970:intron | 20.0% |
| ! | AGTAACATAGAGAATAAAGA+AGG | + | chr5_3:10382613-10382632 | None:intergenic | 25.0% |
| ! | TACAGATTCTACAATAAAAG+TGG | - | chr5_3:10382876-10382895 | Msa0797970:intron | 25.0% |
| ! | ACAGATTCTACAATAAAAGT+GGG | - | chr5_3:10382877-10382896 | Msa0797970:intron | 25.0% |
| ! | AACATTAAAAATCCGCAAAT+TGG | - | chr5_3:10382920-10382939 | Msa0797970:intron | 25.0% |
| ! | ACATTAAAAATCCGCAAATT+GGG | - | chr5_3:10382921-10382940 | Msa0797970:intron | 25.0% |
| !!! | TTAATTTGCTTTGGAATGTT+TGG | - | chr5_3:10382967-10382986 | Msa0797970:intron | 25.0% |
| ! | ATAGGAATTGTTCCATAAAA+CGG | - | chr5_3:10383021-10383040 | Msa0797970:intron | 25.0% |
| ! | CGGTTGAATGAAAAAAAAAA+TGG | + | chr5_3:10383269-10383288 | None:intergenic | 25.0% |
| ! | TATAGACATTCATAATCCAA+CGG | - | chr5_3:10383405-10383424 | Msa0797970:CDS | 25.0% |
| !!! | AATTTGTTTTAACTTGCTCA+CGG | - | chr5_3:10383435-10383454 | Msa0797970:CDS | 25.0% |
| ! | AATAGTTATAGAAGATGGAT+CGG | - | chr5_3:10383856-10383875 | Msa0797970:CDS | 25.0% |
| !! | AAATTTTGTCAATCAGAAAC+CGG | - | chr5_3:10384082-10384101 | Msa0797970:intron | 25.0% |
| ! | CAATATTGAAGATTATGAAG+AGG | - | chr5_3:10384930-10384949 | Msa0797970:intron | 25.0% |
| ! | TTAGATGAGCAATTTAACAA+AGG | - | chr5_3:10385062-10385081 | Msa0797970:intron | 25.0% |
| !! | TTAGTTTGATTCAATTTACC+AGG | - | chr5_3:10385335-10385354 | Msa0797970:CDS | 25.0% |
| ! | GGGAAAACAACAAATTAAAT+TGG | + | chr5_3:10385427-10385446 | None:intergenic | 25.0% |
| ! | TAATATATAAAGTGCATGCT+AGG | - | chr5_3:10385457-10385476 | Msa0797970:CDS | 25.0% |
| ! | AATATATAAAGTGCATGCTA+GGG | - | chr5_3:10385458-10385477 | Msa0797970:CDS | 25.0% |
| ! | AGTTCATTATCATATATGCT+GGG | + | chr5_3:10385573-10385592 | None:intergenic | 25.0% |
| ! | AAGTTCATTATCATATATGC+TGG | + | chr5_3:10385574-10385593 | None:intergenic | 25.0% |
| ! | TATTAAATGACAGAATCATC+AGG | - | chr5_3:10385678-10385697 | Msa0797970:CDS | 25.0% |
| ! | AGCAATAATAATCAAGCATT+TGG | - | chr5_3:10385756-10385775 | Msa0797970:five_prime_UTR | 25.0% |
| ! | GCAATAATAATCAAGCATTT+GGG | - | chr5_3:10385757-10385776 | Msa0797970:five_prime_UTR | 25.0% |
| ! | AAATCTATGCATTTCATTAG+TGG | + | chr5_3:10386082-10386101 | None:intergenic | 25.0% |
| ! | ACTAATGAAATGCATAGATT+TGG | - | chr5_3:10386081-10386100 | Msa0797970:intron | 25.0% |
| ! | GACAATTTCAAGATATTGAA+AGG | + | chr5_3:10386343-10386362 | None:intergenic | 25.0% |
| ! | TATTCATTACATTAGTCCTT+TGG | + | chr5_3:10386367-10386386 | None:intergenic | 25.0% |
| ! | TTTGAACACTAAAACATGTT+TGG | - | chr5_3:10386415-10386434 | Msa0797970:intron | 25.0% |
| !! | ATTAATGTTGTTGTTCAAGA+GGG | + | chr5_3:10386833-10386852 | None:intergenic | 25.0% |
| !! | AATTAATGTTGTTGTTCAAG+AGG | + | chr5_3:10386834-10386853 | None:intergenic | 25.0% |
| !! | AATGTGAATTTAAAATGGCA+AGG | + | chr5_3:10386876-10386895 | None:intergenic | 25.0% |
| ! | TGATAAAAGTAAGCCAAATT+GGG | - | chr5_3:10386985-10387004 | Msa0797970:five_prime_UTR | 25.0% |
| ! | CTACTACATAGATATTATTC+TGG | - | chr5_3:10387087-10387106 | Msa0797970:five_prime_UTR | 25.0% |
| TACATAGAAAGAGAAACAAG+TGG | - | chr5_3:10382382-10382401 | Msa0797970:three_prime_UTR | 30.0% | |
| AGTGTATCATAGATACTCAT+AGG | + | chr5_3:10382557-10382576 | None:intergenic | 30.0% | |
| !! | TTAAACTTTGAGATGAGTTC+AGG | + | chr5_3:10382587-10382606 | None:intergenic | 30.0% |
| !!! | ATTTTAAAACCTCAAGCGAA+AGG | - | chr5_3:10382799-10382818 | Msa0797970:intron | 30.0% |
| !!! | TTTTAAAACCTCAAGCGAAA+GGG | - | chr5_3:10382800-10382819 | Msa0797970:intron | 30.0% |
| !!! | GGAATTGTTCCATGTTTTTT+TGG | - | chr5_3:10382995-10383014 | Msa0797970:intron | 30.0% |
| !!! | TCCATGTTTTTTTGGTGAAT+AGG | - | chr5_3:10383003-10383022 | Msa0797970:intron | 30.0% |
| TCCTATTCACCAAAAAAACA+TGG | + | chr5_3:10383007-10383026 | None:intergenic | 30.0% | |
| TAGGAATTGTTCCATAAAAC+GGG | - | chr5_3:10383022-10383041 | Msa0797970:intron | 30.0% | |
| AGTTAAAGTGAAAGAGACAT+AGG | - | chr5_3:10383132-10383151 | Msa0797970:intron | 30.0% | |
| ! | AAACAAATTTTCTTAGCCGT+TGG | + | chr5_3:10383424-10383443 | None:intergenic | 30.0% |
| AGAAGAAGAAGAAGAAAAGA+AGG | + | chr5_3:10383592-10383611 | None:intergenic | 30.0% | |
| AAGAAGAAGAAGAAGAAGAA+AGG | + | chr5_3:10383596-10383615 | None:intergenic | 30.0% | |
| AGGAAAAACTATGAATCAGA+AGG | - | chr5_3:10383746-10383765 | Msa0797970:intron | 30.0% | |
| GGAAAAACTATGAATCAGAA+GGG | - | chr5_3:10383747-10383766 | Msa0797970:intron | 30.0% | |
| !! | GAAGTTGATGTTGATGAAAA+AGG | - | chr5_3:10383794-10383813 | Msa0797970:intron | 30.0% |
| ! | GATGTTGATGAAAAAGGAAA+AGG | - | chr5_3:10383800-10383819 | Msa0797970:intron | 30.0% |
| TCAGCAATAGTTATAGAAGA+TGG | - | chr5_3:10383851-10383870 | Msa0797970:CDS | 30.0% | |
| !!! | GTTACTTTTTACAGAAGAAC+AGG | - | chr5_3:10384184-10384203 | Msa0797970:intron | 30.0% |
| TTGTGGAAAACAAGTGTATT+TGG | - | chr5_3:10384510-10384529 | Msa0797970:CDS | 30.0% | |
| TGTGGAAAACAAGTGTATTT+GGG | - | chr5_3:10384511-10384530 | Msa0797970:CDS | 30.0% | |
| TGTAAGATCAGTTACATATG+AGG | - | chr5_3:10384552-10384571 | Msa0797970:intron | 30.0% | |
| ACATATGAGGTAGTTAAAAG+TGG | - | chr5_3:10384565-10384584 | Msa0797970:intron | 30.0% | |
| AATTAAGTTTAGAGGAGTAG+AGG | - | chr5_3:10384894-10384913 | Msa0797970:intron | 30.0% | |
| ! | CTATATTTAGAACTTCCTCT+TGG | + | chr5_3:10385129-10385148 | None:intergenic | 30.0% |
| !! | AGAGGAAGTTCTAAATATAG+AGG | - | chr5_3:10385129-10385148 | Msa0797970:intron | 30.0% |
| TTTGCATAAATGTGGAAGAT+GGG | - | chr5_3:10385158-10385177 | Msa0797970:intron | 30.0% | |
| ATTTACCAGGTATGTTTATC+TGG | - | chr5_3:10385348-10385367 | Msa0797970:CDS | 30.0% | |
| TTTACCAGGTATGTTTATCT+GGG | - | chr5_3:10385349-10385368 | Msa0797970:CDS | 30.0% | |
| !!! | GCTAGGGTTTTAAATTTTTG+TGG | - | chr5_3:10385474-10385493 | Msa0797970:CDS | 30.0% |
| !! | TTTGTGGCTCATTTTGTTTA+AGG | - | chr5_3:10385490-10385509 | Msa0797970:CDS | 30.0% |
| !! | TTGTGGCTCATTTTGTTTAA+GGG | - | chr5_3:10385491-10385510 | Msa0797970:CDS | 30.0% |
| AAAGCAGCAATTAAATGCAA+TGG | - | chr5_3:10385522-10385541 | Msa0797970:CDS | 30.0% | |
| AATTAAATGCAATGGCAAAG+AGG | - | chr5_3:10385530-10385549 | Msa0797970:CDS | 30.0% | |
| ATATATGCTGGGATCAAAAT+TGG | + | chr5_3:10385562-10385581 | None:intergenic | 30.0% | |
| ! | CACAATTTGGATTTGAGTTT+GGG | - | chr5_3:10385714-10385733 | Msa0797970:exon | 30.0% |
| ! | ACAATTTGGATTTGAGTTTG+GGG | - | chr5_3:10385715-10385734 | Msa0797970:exon | 30.0% |
| AATATACTACCTAAACCATG+TGG | - | chr5_3:10385961-10385980 | Msa0797970:intron | 30.0% | |
| TTACTTATACCACATGGTTT+AGG | + | chr5_3:10385973-10385992 | None:intergenic | 30.0% | |
| TCAATCATAGGTAACCTATA+GGG | + | chr5_3:10386108-10386127 | None:intergenic | 30.0% | |
| TTCAATCATAGGTAACCTAT+AGG | + | chr5_3:10386109-10386128 | None:intergenic | 30.0% | |
| ! | GAAAATTGTGAAGCATTTGA+GGG | + | chr5_3:10386137-10386156 | None:intergenic | 30.0% |
| TACTCACATGAAAATTTGAG+GGG | + | chr5_3:10386170-10386189 | None:intergenic | 30.0% | |
| GTACTCACATGAAAATTTGA+GGG | + | chr5_3:10386171-10386190 | None:intergenic | 30.0% | |
| AGTACTCACATGAAAATTTG+AGG | + | chr5_3:10386172-10386191 | None:intergenic | 30.0% | |
| !!! | TACTTTCTCTTTTAGCTCAT+TGG | - | chr5_3:10386202-10386221 | Msa0797970:intron | 30.0% |
| TATCTTGAAATTGTCTCCAA+AGG | - | chr5_3:10386348-10386367 | Msa0797970:intron | 30.0% | |
| !! | GCGATTCTTTAAAATATACC+TGG | + | chr5_3:10386444-10386463 | None:intergenic | 30.0% |
| TGAGCTAAAGACTATTCTTT+AGG | - | chr5_3:10386466-10386485 | Msa0797970:intron | 30.0% | |
| !! | AGACTATTCTTTAGGACTAT+AGG | - | chr5_3:10386474-10386493 | Msa0797970:intron | 30.0% |
| ATGTTAAATCACTTCCGATT+CGG | + | chr5_3:10386661-10386680 | None:intergenic | 30.0% | |
| AAACCATAACTTTACCATTG+AGG | - | chr5_3:10386953-10386972 | Msa0797970:intron | 30.0% | |
| GTGATAAAAGTAAGCCAAAT+TGG | - | chr5_3:10386984-10387003 | Msa0797970:five_prime_UTR | 30.0% | |
| !!! | TGTTGTTTTGCTTCTAACAG+AGG | + | chr5_3:10382289-10382308 | None:intergenic | 35.0% |
| !! | AAGGTTTGCTTTCTGTTTTG+CGG | - | chr5_3:10382458-10382477 | Msa0797970:three_prime_UTR | 35.0% |
| TGCAATGTGAAGTGAAGAAA+AGG | + | chr5_3:10382766-10382785 | None:intergenic | 35.0% | |
| GTCATTAGATTCTGTTTGCT+TGG | + | chr5_3:10382844-10382863 | None:intergenic | 35.0% | |
| TCTGATTTAGTCCCAATTTG+CGG | + | chr5_3:10382935-10382954 | None:intergenic | 35.0% | |
| ATGAGAATGAGATTTCAGGA+GGG | + | chr5_3:10383180-10383199 | None:intergenic | 35.0% | |
| AAGCATGAGAATGAGATTTC+AGG | + | chr5_3:10383184-10383203 | None:intergenic | 35.0% | |
| ATCTACATCAACCAACATAC+TGG | + | chr5_3:10383313-10383332 | None:intergenic | 35.0% | |
| ! | GTATGTTGGTTGATGTAGAT+CGG | - | chr5_3:10383313-10383332 | Msa0797970:CDS | 35.0% |
| AAGTTTGAGCAAGCAAAACA+GGG | + | chr5_3:10383497-10383516 | None:intergenic | 35.0% | |
| AGTTGAGATAGAGAAGAATG+TGG | - | chr5_3:10383699-10383718 | Msa0797970:CDS | 35.0% | |
| GTTGAGATAGAGAAGAATGT+GGG | - | chr5_3:10383700-10383719 | Msa0797970:CDS | 35.0% | |
| ! | TCATAGTTTTTCCTCTGATC+AGG | + | chr5_3:10383740-10383759 | None:intergenic | 35.0% |
| ! | GATGAAAAAGGAAAAGGTGT+TGG | - | chr5_3:10383806-10383825 | Msa0797970:intron | 35.0% |
| !!! | TAGACAGTTTTTTCCTGTAG+AGG | - | chr5_3:10383967-10383986 | Msa0797970:intron | 35.0% |
| !! | GGATTCTGAGATGATAACAA+CGG | - | chr5_3:10383988-10384007 | Msa0797970:intron | 35.0% |
| ! | TTCTTTTCCAAGAGCTCATT+GGG | - | chr5_3:10384051-10384070 | Msa0797970:CDS | 35.0% |
| ! | AGCTTCAACTATTTTACCAC+CGG | + | chr5_3:10384104-10384123 | None:intergenic | 35.0% |
| ACGTGAGATATATCCATGTT+AGG | - | chr5_3:10384340-10384359 | Msa0797970:CDS | 35.0% | |
| TTAAGGGATAACTGATGAGA+TGG | - | chr5_3:10384678-10384697 | Msa0797970:intron | 35.0% | |
| TTGTCTGGGTAAATTTGTGT+AGG | - | chr5_3:10384703-10384722 | Msa0797970:intron | 35.0% | |
| AGAGCTGCAATTAAGTTTAG+AGG | - | chr5_3:10384886-10384905 | Msa0797970:intron | 35.0% | |
| ! | TTATGAAGAGGATTTGAAGC+AGG | - | chr5_3:10384942-10384961 | Msa0797970:intron | 35.0% |
| ! | ATTTGAAGCAGGTGAGTTAT+GGG | - | chr5_3:10384953-10384972 | Msa0797970:intron | 35.0% |
| CTTTGCATAAATGTGGAAGA+TGG | - | chr5_3:10385157-10385176 | Msa0797970:intron | 35.0% | |
| CCAAACTCAAATCCAAATTG+TGG | + | chr5_3:10385716-10385735 | None:intergenic | 35.0% | |
| ! | CCACAATTTGGATTTGAGTT+TGG | - | chr5_3:10385713-10385732 | Msa0797970:exon | 35.0% |
| TATTCACAGGCTGAATTTCA+AGG | + | chr5_3:10385945-10385964 | None:intergenic | 35.0% | |
| GGTTTAGGTAGTATATTCAC+AGG | + | chr5_3:10385958-10385977 | None:intergenic | 35.0% | |
| ACCATGTGGTATAAGTAACA+TGG | - | chr5_3:10385975-10385994 | Msa0797970:intron | 35.0% | |
| ! | TCCATGTTACTTATACCACA+TGG | + | chr5_3:10385979-10385998 | None:intergenic | 35.0% |
| TGTGGTATAAGTAACATGGA+TGG | - | chr5_3:10385979-10385998 | Msa0797970:intron | 35.0% | |
| !! | TAACATGGATGGCTTTGTAA+GGG | - | chr5_3:10385990-10386009 | Msa0797970:intron | 35.0% |
| AAGATTGATGAAGGTGAGTT+TGG | + | chr5_3:10386053-10386072 | None:intergenic | 35.0% | |
| ! | GGAAAATTGTGAAGCATTTG+AGG | + | chr5_3:10386138-10386157 | None:intergenic | 35.0% |
| CTAAAACATGTTTGGATTCC+AGG | - | chr5_3:10386423-10386442 | Msa0797970:intron | 35.0% | |
| ATTTCAAACCTGCATTGCAT+TGG | - | chr5_3:10386543-10386562 | Msa0797970:intron | 35.0% | |
| CAATGTCTGATCAACAAAAG+TGG | - | chr5_3:10386684-10386703 | Msa0797970:intron | 35.0% | |
| ATCAACAAAAGTGGCAATCA+GGG | - | chr5_3:10386693-10386712 | Msa0797970:intron | 35.0% | |
| TGAGCATGTACAAATGAATG+CGG | - | chr5_3:10386916-10386935 | Msa0797970:intron | 35.0% | |
| TCACCTCAATGGTAAAGTTA+TGG | + | chr5_3:10386959-10386978 | None:intergenic | 35.0% | |
| TATCACTTCTTTCACCTCAA+TGG | + | chr5_3:10386970-10386989 | None:intergenic | 35.0% | |
| GAGTCAGTCAAACTAACAAA+CGG | - | chr5_3:10387030-10387049 | Msa0797970:five_prime_UTR | 35.0% | |
| GTGGTGTATGTATGTGTCTA+TGG | - | chr5_3:10382401-10382420 | Msa0797970:three_prime_UTR | 40.0% | |
| AGAGTGAGAGAGAACATTGA+AGG | - | chr5_3:10382439-10382458 | Msa0797970:three_prime_UTR | 40.0% | |
| TAAAGCTACTCTCTCACAGT+GGG | + | chr5_3:10382516-10382535 | None:intergenic | 40.0% | |
| TTAAAGCTACTCTCTCACAG+TGG | + | chr5_3:10382517-10382536 | None:intergenic | 40.0% | |
| !! | CTGTGAGAGAGTAGCTTTAA+CGG | - | chr5_3:10382517-10382536 | Msa0797970:three_prime_UTR | 40.0% |
| TGATGGAAAAACCTTCCGAT+CGG | + | chr5_3:10382663-10382682 | None:intergenic | 40.0% | |
| ! | GAAGGTTTTTCCATCACCAT+GGG | - | chr5_3:10382667-10382686 | Msa0797970:CDS | 40.0% |
| !! | GCTTTGGAATGTTTGGTTCT+TGG | - | chr5_3:10382974-10382993 | Msa0797970:intron | 40.0% |
| ! | AAAGGCAGAAACCCGTTTTA+TGG | + | chr5_3:10383036-10383055 | None:intergenic | 40.0% |
| !! | CACTGCATTGATTTGCAGAA+AGG | + | chr5_3:10383054-10383073 | None:intergenic | 40.0% |
| TTCTGCAAATCAATGCAGTG+TGG | - | chr5_3:10383054-10383073 | Msa0797970:intron | 40.0% | |
| CATGAGAATGAGATTTCAGG+AGG | + | chr5_3:10383181-10383200 | None:intergenic | 40.0% | |
| TAGTGCAACAACAAGGAACA+CGG | + | chr5_3:10383289-10383308 | None:intergenic | 40.0% | |
| TACTGGATAGTGCAACAACA+AGG | + | chr5_3:10383296-10383315 | None:intergenic | 40.0% | |
| TGTTGCACTATCCAGTATGT+TGG | - | chr5_3:10383299-10383318 | Msa0797970:CDS | 40.0% | |
| GTTGATGTAGATCGGAGTTT+AGG | - | chr5_3:10383321-10383340 | Msa0797970:CDS | 40.0% | |
| !!! | TGTTTTAACTTGCTCACGGT+AGG | - | chr5_3:10383439-10383458 | Msa0797970:CDS | 40.0% |
| CAAGTTTGAGCAAGCAAAAC+AGG | + | chr5_3:10383498-10383517 | None:intergenic | 40.0% | |
| TATGCTCTATTGGGCAGTTT+AGG | - | chr5_3:10383525-10383544 | Msa0797970:intron | 40.0% | |
| ATGCTCTATTGGGCAGTTTA+GGG | - | chr5_3:10383526-10383545 | Msa0797970:intron | 40.0% | |
| !! | TGAATCAGAAGGGTGTTCAA+TGG | - | chr5_3:10383757-10383776 | Msa0797970:intron | 40.0% |
| AAAAACTGTCTAGTGACAGG+TGG | + | chr5_3:10383959-10383978 | None:intergenic | 40.0% | |
| GGAAAAAACTGTCTAGTGAC+AGG | + | chr5_3:10383962-10383981 | None:intergenic | 40.0% | |
| ATCATCTCAGAATCCTCTAC+AGG | + | chr5_3:10383983-10384002 | None:intergenic | 40.0% | |
| !! | TTCTGAGATGATAACAACGG+TGG | - | chr5_3:10383991-10384010 | Msa0797970:intron | 40.0% |
| ! | CTTCTTTTCCAAGAGCTCAT+TGG | - | chr5_3:10384050-10384069 | Msa0797970:CDS | 40.0% |
| ! | TTTTGTCAATCAGAAACCGG+TGG | - | chr5_3:10384085-10384104 | Msa0797970:intron | 40.0% |
| TCCAGAAGTTCTCAGTATAG+AGG | - | chr5_3:10384160-10384179 | Msa0797970:intron | 40.0% | |
| ACCTCTATACTGAGAACTTC+TGG | + | chr5_3:10384164-10384183 | None:intergenic | 40.0% | |
| TTTACAGAAGAACAGGTCGA+TGG | - | chr5_3:10384191-10384210 | Msa0797970:intron | 40.0% | |
| TTACAGAAGAACAGGTCGAT+GGG | - | chr5_3:10384192-10384211 | Msa0797970:intron | 40.0% | |
| ! | GCTTCAGAGGTACAGTAATA+TGG | + | chr5_3:10384246-10384265 | None:intergenic | 40.0% |
| ATAGACACGTCTGATCTTAG+AGG | + | chr5_3:10384276-10384295 | None:intergenic | 40.0% | |
| CATCAGACACAATCCTAACA+TGG | + | chr5_3:10384356-10384375 | None:intergenic | 40.0% | |
| TTTGGTTGTGTTTGTGATGC+AGG | - | chr5_3:10384485-10384504 | Msa0797970:CDS | 40.0% | |
| TTGGTTGTGTTTGTGATGCA+GGG | - | chr5_3:10384486-10384505 | Msa0797970:CDS | 40.0% | |
| !!! | ACTGATGAGATGGTTTTGTC+TGG | - | chr5_3:10384688-10384707 | Msa0797970:intron | 40.0% |
| !!! | CTGATGAGATGGTTTTGTCT+GGG | - | chr5_3:10384689-10384708 | Msa0797970:CDS | 40.0% |
| TCTGGGTAAATTTGTGTAGG+TGG | - | chr5_3:10384706-10384725 | Msa0797970:intron | 40.0% | |
| ! | GATTTGAAGCAGGTGAGTTA+TGG | - | chr5_3:10384952-10384971 | Msa0797970:intron | 40.0% |
| ! | TTTGAAGCAGGTGAGTTATG+GGG | - | chr5_3:10384954-10384973 | Msa0797970:intron | 40.0% |
| GGTGTGACTTTGCATAAATG+TGG | - | chr5_3:10385150-10385169 | Msa0797970:intron | 40.0% | |
| CAAACCCAGATAAACATACC+TGG | + | chr5_3:10385356-10385375 | None:intergenic | 40.0% | |
| TGTCACCACTGATCAATACA+TGG | - | chr5_3:10385794-10385813 | Msa0797970:five_prime_UTR | 40.0% | |
| ACATGGCACCTGAATCAAAT+TGG | - | chr5_3:10385811-10385830 | Msa0797970:five_prime_UTR | 40.0% | |
| !! | GTAACATGGATGGCTTTGTA+AGG | - | chr5_3:10385989-10386008 | Msa0797970:intron | 40.0% |
| TGGCAACTGAAGATTGATGA+AGG | + | chr5_3:10386062-10386081 | None:intergenic | 40.0% | |
| ! | TGCATAGATTTGGTCCCTAT+AGG | - | chr5_3:10386091-10386110 | Msa0797970:intron | 40.0% |
| !! | TGAGGGTGTTGTTCAATCAT+AGG | + | chr5_3:10386120-10386139 | None:intergenic | 40.0% |
| AAATTTGAGGGGTGAAGATG+TGG | + | chr5_3:10386159-10386178 | None:intergenic | 40.0% | |
| GATCAACAAAAGTGGCAATC+AGG | - | chr5_3:10386692-10386711 | Msa0797970:intron | 40.0% | |
| !! | AAGAGGGTCTTATTTGAGGT+GGG | + | chr5_3:10386763-10386782 | None:intergenic | 40.0% |
| !! | GAAGAAGAGGGTCTTATTTG+AGG | + | chr5_3:10386767-10386786 | None:intergenic | 40.0% |
| ATAAGACCCTCTTCTTCTCA+AGG | - | chr5_3:10386770-10386789 | Msa0797970:intron | 40.0% | |
| ! | AAGGTTGGCTGCAGAAAAAT+GGG | - | chr5_3:10386789-10386808 | Msa0797970:intron | 40.0% |
| ACCAATGAGTGTTCCCAATT+TGG | + | chr5_3:10387001-10387020 | None:intergenic | 40.0% | |
| !! | GAGAGAGTAGCTTTAACGGA+TGG | - | chr5_3:10382521-10382540 | Msa0797970:three_prime_UTR | 45.0% |
| ! | GGAAGGTTTTTCCATCACCA+TGG | - | chr5_3:10382666-10382685 | Msa0797970:CDS | 45.0% |
| ! | TTTTTCCATCACCATGGGAC+AGG | - | chr5_3:10382672-10382691 | Msa0797970:CDS | 45.0% |
| ! | TTTTTCCTGTCCCATGGTGA+TGG | + | chr5_3:10382680-10382699 | None:intergenic | 45.0% |
| !!! | GCTGATTTTTTCCTGTCCCA+TGG | + | chr5_3:10382686-10382705 | None:intergenic | 45.0% |
| CTCATTATCCCTTTCGCTTG+AGG | + | chr5_3:10382811-10382830 | None:intergenic | 45.0% | |
| TGCAAATCAATGCAGTGTGG+TGG | - | chr5_3:10383057-10383076 | Msa0797970:intron | 45.0% | |
| TTGCCTCGTCTATGCTCTAT+TGG | - | chr5_3:10383515-10383534 | Msa0797970:intron | 45.0% | |
| TGCCTCGTCTATGCTCTATT+GGG | - | chr5_3:10383516-10383535 | Msa0797970:intron | 45.0% | |
| TGAATGACTCACCTGATCAG+AGG | - | chr5_3:10383726-10383745 | Msa0797970:CDS | 45.0% | |
| !! | TCAGAAGGGTGTTCAATGGA+AGG | - | chr5_3:10383761-10383780 | Msa0797970:intron | 45.0% |
| GATGGATCGGAAGAAGAAGA+TGG | - | chr5_3:10383869-10383888 | Msa0797970:CDS | 45.0% | |
| TGAGATGATAACAACGGTGG+TGG | - | chr5_3:10383994-10384013 | Msa0797970:intron | 45.0% | |
| TTTCCAAGAGCTCATTGGGT+TGG | - | chr5_3:10384055-10384074 | Msa0797970:CDS | 45.0% | |
| CCTCTACGACTCTTCTTCAT+CGG | + | chr5_3:10384133-10384152 | None:intergenic | 45.0% | |
| TACTGAGAACTTCTGGACCT+TGG | + | chr5_3:10384157-10384176 | None:intergenic | 45.0% | |
| GTCGATGGGAGTCTCATATA+TGG | - | chr5_3:10384206-10384225 | Msa0797970:intron | 45.0% | |
| !! | TAGAGGTATTCGTGCTTCAG+AGG | + | chr5_3:10384259-10384278 | None:intergenic | 45.0% |
| TGTTTGTGATGCAGGGATTG+TGG | - | chr5_3:10384493-10384512 | Msa0797970:CDS | 45.0% | |
| !! | AATTGATTTGGGAGGGAGAC+AGG | - | chr5_3:10384614-10384633 | Msa0797970:intron | 45.0% |
| !! | CAAAGCACTGGATTTCCAAG+AGG | - | chr5_3:10385111-10385130 | Msa0797970:intron | 45.0% |
| GCTCGAATGGGTCAATTCTT+AGG | - | chr5_3:10385183-10385202 | Msa0797970:intron | 45.0% | |
| ACACTGAGATTGAAGCTGCA+AGG | - | chr5_3:10385380-10385399 | Msa0797970:CDS | 45.0% | |
| TAACGCTGCAGACCACAATT+TGG | - | chr5_3:10385701-10385720 | Msa0797970:CDS | 45.0% | |
| ! | AGGTGCCATGTATTGATCAG+TGG | + | chr5_3:10385802-10385821 | None:intergenic | 45.0% |
| TGGCACCTGAATCAAATTGG+CGG | - | chr5_3:10385814-10385833 | Msa0797970:five_prime_UTR | 45.0% | |
| CCATTCCGCCAATTTGATTC+AGG | + | chr5_3:10385822-10385841 | None:intergenic | 45.0% | |
| CCTGAATCAAATTGGCGGAA+TGG | - | chr5_3:10385819-10385838 | Msa0797970:five_prime_UTR | 45.0% | |
| GAATCAAATTGGCGGAATGG+TGG | - | chr5_3:10385822-10385841 | Msa0797970:five_prime_UTR | 45.0% | |
| ! | GAATGGTGGAATCAGACCTA+AGG | - | chr5_3:10385836-10385855 | Msa0797970:five_prime_UTR | 45.0% |
| !! | ATGGATGGCTTTGTAAGGGA+TGG | - | chr5_3:10385994-10386013 | Msa0797970:intron | 45.0% |
| ! | GGCTTTGTAAGGGATGGATA+TGG | - | chr5_3:10386000-10386019 | Msa0797970:intron | 45.0% |
| ATGGAGAGAATGAAGCCTTG+AGG | - | chr5_3:10386019-10386038 | Msa0797970:intron | 45.0% | |
| ! | AGTTTGGCTTAGCATCCTCA+AGG | + | chr5_3:10386037-10386056 | None:intergenic | 45.0% |
| CAATCTTGCCAATGCAATGC+AGG | + | chr5_3:10386554-10386573 | None:intergenic | 45.0% | |
| GTTGCTAACAAATGTGGAGG+AGG | + | chr5_3:10386719-10386738 | None:intergenic | 45.0% | |
| GCAGTTGCTAACAAATGTGG+AGG | + | chr5_3:10386722-10386741 | None:intergenic | 45.0% | |
| GCAGCAGTTGCTAACAAATG+TGG | + | chr5_3:10386725-10386744 | None:intergenic | 45.0% | |
| !! | GAAGAGGGTCTTATTTGAGG+TGG | + | chr5_3:10386764-10386783 | None:intergenic | 45.0% |
| AGCCAACCTTGAGAAGAAGA+GGG | + | chr5_3:10386779-10386798 | None:intergenic | 45.0% | |
| ! | CAAGGTTGGCTGCAGAAAAA+TGG | - | chr5_3:10386788-10386807 | Msa0797970:intron | 45.0% |
| TGTTCAAGAGGGTCTCATGA+GGG | + | chr5_3:10386822-10386841 | None:intergenic | 45.0% | |
| TTGTTCAAGAGGGTCTCATG+AGG | + | chr5_3:10386823-10386842 | None:intergenic | 45.0% | |
| GCCAAATTGGGAACACTCAT+TGG | - | chr5_3:10386997-10387016 | Msa0797970:five_prime_UTR | 45.0% | |
| !!! | ACTTTTTTTTATTATTATTA+TGG | + | chr5_3:10382728-10382747 | None:intergenic | 5.0% |
| !! | TTTAATAATAAAAATTGATT+TGG | - | chr5_3:10384602-10384621 | Msa0797970:intron | 5.0% |
| !!! | TTAATAATAAAAATTGATTT+GGG | - | chr5_3:10384603-10384622 | Msa0797970:intron | 5.0% |
| !!! | AGTATATATAATAAATTTTT+TGG | - | chr5_3:10384838-10384857 | Msa0797970:intron | 5.0% |
| !! | AATAATTAATTAAAAACTAT+AGG | + | chr5_3:10385010-10385029 | None:intergenic | 5.0% |
| !! | TTATATATTATTAATTGAAA+GGG | + | chr5_3:10385447-10385466 | None:intergenic | 5.0% |
| !! | TTTATATATTATTAATTGAA+AGG | + | chr5_3:10385448-10385467 | None:intergenic | 5.0% |
| ! | TCTGTTTTGCGGCTCAGTCT+AGG | - | chr5_3:10382469-10382488 | Msa0797970:three_prime_UTR | 50.0% |
| ! | CTGTTTTGCGGCTCAGTCTA+GGG | - | chr5_3:10382470-10382489 | Msa0797970:three_prime_UTR | 50.0% |
| ATCGGTGTGGATAGACACGA+AGG | + | chr5_3:10382645-10382664 | None:intergenic | 50.0% | |
| TCGTGTCTATCCACACCGAT+CGG | - | chr5_3:10382645-10382664 | Msa0797970:CDS | 50.0% | |
| GAAAAACCTTCCGATCGGTG+TGG | + | chr5_3:10382658-10382677 | None:intergenic | 50.0% | |
| TCACGGTAGGAGACCTATCA+AGG | - | chr5_3:10383452-10383471 | Msa0797970:CDS | 50.0% | |
| TGCCCAATAGAGCATAGACG+AGG | + | chr5_3:10383521-10383540 | None:intergenic | 50.0% | |
| !! | ACGGTGGTGGATTCTTCTTC+CGG | - | chr5_3:10384007-10384026 | Msa0797970:intron | 50.0% |
| ACACCAACCCAATGAGCTCT+TGG | + | chr5_3:10384061-10384080 | None:intergenic | 50.0% | |
| CCGATGAAGAAGAGTCGTAG+AGG | - | chr5_3:10384130-10384149 | Msa0797970:intron | 50.0% | |
| AGAAGAGTCGTAGAGGACCA+AGG | - | chr5_3:10384137-10384156 | Msa0797970:intron | 50.0% | |
| GTACTACGACGACAAAGCAC+TGG | - | chr5_3:10385099-10385118 | Msa0797970:intron | 50.0% | |
| TGGAAGATGGGAAGCTCGAA+TGG | - | chr5_3:10385170-10385189 | Msa0797970:intron | 50.0% | |
| GGAAGATGGGAAGCTCGAAT+GGG | - | chr5_3:10385171-10385190 | Msa0797970:intron | 50.0% | |
| GACCCTCTTCTTCTCAAGGT+TGG | - | chr5_3:10386774-10386793 | Msa0797970:intron | 50.0% | |
| CAGCCAACCTTGAGAAGAAG+AGG | + | chr5_3:10386780-10386799 | None:intergenic | 50.0% | |
| ! | TTTTGCGGCTCAGTCTAGGG+TGG | - | chr5_3:10382473-10382492 | Msa0797970:three_prime_UTR | 55.0% |
| ! | TTTGCGGCTCAGTCTAGGGT+GGG | - | chr5_3:10382474-10382493 | Msa0797970:three_prime_UTR | 55.0% |
| CTAGGGTGGGAGAGCTTGAT+AGG | - | chr5_3:10382487-10382506 | Msa0797970:three_prime_UTR | 55.0% | |
| GTGGATAGACACGAAGGAGG+AGG | + | chr5_3:10382639-10382658 | None:intergenic | 55.0% | |
| GGTGTGGATAGACACGAAGG+AGG | + | chr5_3:10382642-10382661 | None:intergenic | 55.0% | |
| GTCTATCCACACCGATCGGA+AGG | - | chr5_3:10382649-10382668 | Msa0797970:CDS | 55.0% | |
| ! | TCAATGCAGTGTGGTGGCGA+CGG | - | chr5_3:10383063-10383082 | Msa0797970:intron | 55.0% |
| CAGACTCTATCTCCATGCGC+CGG | + | chr5_3:10383106-10383125 | None:intergenic | 55.0% | |
| ! | TTCAGGAGGGTGTGCGAACA+GGG | + | chr5_3:10383167-10383186 | None:intergenic | 55.0% |
| ! | TTTCAGGAGGGTGTGCGAAC+AGG | + | chr5_3:10383168-10383187 | None:intergenic | 55.0% |
| CTAGGGTGGGAGACCTTGAT+AGG | + | chr5_3:10383468-10383487 | None:intergenic | 55.0% | |
| !! | GCAAAACAGGGCGCTGTCTA+GGG | + | chr5_3:10383485-10383504 | None:intergenic | 55.0% |
| !! | AGCAAAACAGGGCGCTGTCT+AGG | + | chr5_3:10383486-10383505 | None:intergenic | 55.0% |
| !! | GTGGTGGATTCTTCTTCCGG+TGG | - | chr5_3:10384010-10384029 | Msa0797970:intron | 55.0% |
| GTGGATTCTTCTTCCGGTGG+TGG | - | chr5_3:10384013-10384032 | Msa0797970:intron | 55.0% | |
| ! | GATTCTTCTTCCGGTGGTGG+TGG | - | chr5_3:10384016-10384035 | Msa0797970:intron | 55.0% |
| ACACAGCACATGCAGCTGCT+CGG | - | chr5_3:10384734-10384753 | Msa0797970:intron | 55.0% | |
| GTTTCGAGCAGCAGCAGCAA+TGG | - | chr5_3:10386632-10386651 | Msa0797970:intron | 55.0% | |
| AGCAGCAATGGAGGCCGAAT+CGG | - | chr5_3:10386644-10386663 | Msa0797970:intron | 55.0% | |
| GCAACTGCTGCAGCATCATC+AGG | - | chr5_3:10386734-10386753 | Msa0797970:intron | 55.0% | |
| AAGAGGGTCTCATGAGGGTG+TGG | + | chr5_3:10386817-10386836 | None:intergenic | 55.0% | |
| !! | AACAGGGCGCTGTCTAGGGT+GGG | + | chr5_3:10383481-10383500 | None:intergenic | 60.0% |
| !! | AAACAGGGCGCTGTCTAGGG+TGG | + | chr5_3:10383482-10383501 | None:intergenic | 60.0% |
| !! | TCTTCTTCCGGTGGTGGTGG+TGG | - | chr5_3:10384019-10384038 | Msa0797970:intron | 60.0% |
| ACTTCCACCACCACCACCAC+CGG | + | chr5_3:10384029-10384048 | None:intergenic | 60.0% | |
| TCGAGCAGCAGCAGCAATGG+AGG | - | chr5_3:10386635-10386654 | Msa0797970:intron | 60.0% | |
| ! | ATGCAGTGTGGTGGCGACGG+AGG | - | chr5_3:10383066-10383085 | Msa0797970:intron | 65.0% |
| !! | TCTTCCGGTGGTGGTGGTGG+TGG | - | chr5_3:10384022-10384041 | Msa0797970:intron | 65.0% |
| ! | GGAGGTCGCAGGTGGCTTGC+CGG | - | chr5_3:10383084-10383103 | Msa0797970:intron | 70.0% |
| ! | GTGGTGGCGACGGAGGTCGC+AGG | - | chr5_3:10383073-10383092 | Msa0797970:intron | 75.0% |
| GTGGCGACGGAGGTCGCAGG+TGG | - | chr5_3:10383076-10383095 | Msa0797970:intron | 75.0% | |
| ! | GCAGGTGGCTTGCCGGCGCA+TGG | - | chr5_3:10383091-10383110 | Msa0797970:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 10382243 | 10387201 | 10382243 | ID=Msa0797970;Name=Msa0797970 |
| chr5_3 | mRNA | 10382243 | 10387201 | 10382243 | ID=Msa0797970-mRNA-1;Parent=Msa0797970;Name=Msa0797970-mRNA-1;_AED=0.11;_eAED=0.11;_QI=447|1|1|1|0.9|0.81|11|363|512 |
| chr5_3 | exon | 10382243 | 10382812 | 10382243 | ID=Msa0797970-mRNA-1:exon:4366;Parent=Msa0797970-mRNA-1 |
| chr5_3 | exon | 10383262 | 10383489 | 10383262 | ID=Msa0797970-mRNA-1:exon:4365;Parent=Msa0797970-mRNA-1 |
| chr5_3 | exon | 10383587 | 10383753 | 10383587 | ID=Msa0797970-mRNA-1:exon:4364;Parent=Msa0797970-mRNA-1 |
| chr5_3 | exon | 10383844 | 10383932 | 10383844 | ID=Msa0797970-mRNA-1:exon:4363;Parent=Msa0797970-mRNA-1 |
| chr5_3 | exon | 10384043 | 10384087 | 10384043 | ID=Msa0797970-mRNA-1:exon:4362;Parent=Msa0797970-mRNA-1 |
| chr5_3 | exon | 10384233 | 10384378 | 10384233 | ID=Msa0797970-mRNA-1:exon:4361;Parent=Msa0797970-mRNA-1 |
| chr5_3 | exon | 10384481 | 10384568 | 10384481 | ID=Msa0797970-mRNA-1:exon:4360;Parent=Msa0797970-mRNA-1 |
| chr5_3 | exon | 10384689 | 10384719 | 10384689 | ID=Msa0797970-mRNA-1:exon:4359;Parent=Msa0797970-mRNA-1 |
| chr5_3 | exon | 10384912 | 10384937 | 10384912 | ID=Msa0797970-mRNA-1:exon:4358;Parent=Msa0797970-mRNA-1 |
| chr5_3 | exon | 10385217 | 10385945 | 10385217 | ID=Msa0797970-mRNA-1:exon:4357;Parent=Msa0797970-mRNA-1 |
| chr5_3 | exon | 10386972 | 10387201 | 10386972 | ID=Msa0797970-mRNA-1:exon:4356;Parent=Msa0797970-mRNA-1 |
| chr5_3 | five_prime_UTR | 10386972 | 10387201 | 10386972 | ID=Msa0797970-mRNA-1:five_prime_utr;Parent=Msa0797970-mRNA-1 |
| chr5_3 | five_prime_UTR | 10385729 | 10385945 | 10385729 | ID=Msa0797970-mRNA-1:five_prime_utr;Parent=Msa0797970-mRNA-1 |
| chr5_3 | CDS | 10385217 | 10385728 | 10385217 | ID=Msa0797970-mRNA-1:cds;Parent=Msa0797970-mRNA-1 |
| chr5_3 | CDS | 10384912 | 10384937 | 10384912 | ID=Msa0797970-mRNA-1:cds;Parent=Msa0797970-mRNA-1 |
| chr5_3 | CDS | 10384689 | 10384719 | 10384689 | ID=Msa0797970-mRNA-1:cds;Parent=Msa0797970-mRNA-1 |
| chr5_3 | CDS | 10384481 | 10384568 | 10384481 | ID=Msa0797970-mRNA-1:cds;Parent=Msa0797970-mRNA-1 |
| chr5_3 | CDS | 10384233 | 10384378 | 10384233 | ID=Msa0797970-mRNA-1:cds;Parent=Msa0797970-mRNA-1 |
| chr5_3 | CDS | 10384043 | 10384087 | 10384043 | ID=Msa0797970-mRNA-1:cds;Parent=Msa0797970-mRNA-1 |
| chr5_3 | CDS | 10383844 | 10383932 | 10383844 | ID=Msa0797970-mRNA-1:cds;Parent=Msa0797970-mRNA-1 |
| chr5_3 | CDS | 10383587 | 10383753 | 10383587 | ID=Msa0797970-mRNA-1:cds;Parent=Msa0797970-mRNA-1 |
| chr5_3 | CDS | 10383262 | 10383489 | 10383262 | ID=Msa0797970-mRNA-1:cds;Parent=Msa0797970-mRNA-1 |
| chr5_3 | CDS | 10382606 | 10382812 | 10382606 | ID=Msa0797970-mRNA-1:cds;Parent=Msa0797970-mRNA-1 |
| chr5_3 | three_prime_UTR | 10382243 | 10382605 | 10382243 | ID=Msa0797970-mRNA-1:three_prime_utr;Parent=Msa0797970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
