Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758790 | XP_003607217.2 | 87.106 | 698 | 63 | 2 | 94 | 791 | 317 | 987 | 0.0 | 1185 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758790 | sp|P36428|SYA_ARATH | 66.430 | 703 | 204 | 5 | 94 | 791 | 326 | 1001 | 0.0 | 887 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758790 | A0A396IBC8 | 87.106 | 698 | 63 | 2 | 94 | 791 | 317 | 987 | 0.0 | 1185 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0758790 | Msa0758820 | 0.821922 | 3.119992e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758790 | MtrunA17_Chr4g0038011 | 87.106 | 698 | 63 | 2 | 94 | 791 | 317 | 987 | 0.0 | 1185 |
Msa0758790 | MtrunA17_Chr4g0038031 | 74.020 | 204 | 36 | 1 | 94 | 297 | 278 | 464 | 6.04e-92 | 301 |
Msa0758790 | MtrunA17_Chr4g0038031 | 77.174 | 184 | 32 | 1 | 610 | 793 | 462 | 635 | 5.55e-70 | 242 |
Msa0758790 | MtrunA17_Chr5g0406281 | 59.538 | 173 | 66 | 2 | 1 | 173 | 1 | 169 | 2.56e-54 | 185 |
Msa0758790 | MtrunA17_Chr3g0145961 | 30.254 | 552 | 322 | 13 | 110 | 640 | 342 | 851 | 3.16e-47 | 181 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758790 | AT1G50200.1 | 66.430 | 703 | 204 | 5 | 94 | 791 | 326 | 1001 | 0.0 | 887 |
Msa0758790 | AT1G50200.2 | 65.682 | 711 | 204 | 6 | 94 | 791 | 326 | 1009 | 0.0 | 880 |
Msa0758790 | AT5G22800.1 | 31.284 | 553 | 315 | 14 | 110 | 640 | 340 | 849 | 2.07e-56 | 209 |
Msa0758790 | AT5G22800.2 | 31.284 | 553 | 315 | 14 | 110 | 640 | 365 | 874 | 2.63e-56 | 209 |
Find 198 sgRNAs with CRISPR-Local
Find 622 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCATAATGTTCAAGTTTA+TGG | 0.095893 | 5_2:+14166774 | Msa0758790:CDS |
TCTATGTCCCTTATTAAATT+TGG | 0.146508 | 5_2:-14161950 | None:intergenic |
AAAATCTTCCAAATTTAATA+AGG | 0.178231 | 5_2:+14161942 | Msa0758790:CDS |
TCTAGCTGGCCATAAGTATT+TGG | 0.181385 | 5_2:+14162190 | Msa0758790:CDS |
GAAGAACAATAGATCCTTTC+TGG | 0.201321 | 5_2:-14167208 | None:intergenic |
ACTGGTGCTCGGCCATATTC+TGG | 0.216626 | 5_2:+14163134 | Msa0758790:CDS |
ACCTTACATCCAAATACTTA+TGG | 0.228445 | 5_2:-14162199 | None:intergenic |
AAGGGTCTGCGGACTGTTTC+TGG | 0.234343 | 5_2:+14167450 | Msa0758790:CDS |
GTGTGGTTTAAAGGGGAATT+TGG | 0.241136 | 5_2:+14162112 | Msa0758790:CDS |
AAGCACGATGTGTGGTTTAA+AGG | 0.244947 | 5_2:+14162103 | Msa0758790:intron |
GTTTCAAATTTGCTTGGTTC+AGG | 0.270432 | 5_2:+14165301 | Msa0758790:CDS |
GACAGCTGTGGAACATGTTC+AGG | 0.291996 | 5_2:+14164281 | Msa0758790:CDS |
TGCTCTTGATGCAATTAAAA+TGG | 0.295903 | 5_2:+14167846 | Msa0758790:CDS |
ATCAAGAACTGCTCAAAATA+AGG | 0.306307 | 5_2:+14165080 | Msa0758790:CDS |
GAAAGGAGATAAAGGTAAAT+TGG | 0.318522 | 5_2:+14170234 | Msa0758790:CDS |
AGCAATGTTTAATGATAAAC+AGG | 0.319422 | 5_2:+14170141 | Msa0758790:CDS |
AATTGACTCAATTCTTCTTA+AGG | 0.321886 | 5_2:-14167355 | None:intergenic |
ATGTATGGTTAGCGGCTATA+AGG | 0.328806 | 5_2:-14167044 | None:intergenic |
AGCACGATGTGTGGTTTAAA+GGG | 0.328888 | 5_2:+14162104 | Msa0758790:intron |
TGGTGATGTTGGTGTAATTC+TGG | 0.341373 | 5_2:+14166054 | Msa0758790:CDS |
TGAGCAAATTAATGCTGAAT+TGG | 0.344749 | 5_2:+14167383 | Msa0758790:CDS |
CTAGCACTTTACGTTGGCTT+TGG | 0.346886 | 5_2:-14171258 | None:intergenic |
GGTCCGACTTTCCCAGAATA+TGG | 0.356983 | 5_2:-14163146 | None:intergenic |
TAAACCCGGATAATTATTTC+CGG | 0.361807 | 5_2:-14171073 | None:intergenic |
AAATCTTCCAAATTTAATAA+GGG | 0.364373 | 5_2:+14161943 | Msa0758790:CDS |
CTGTCATTTGCCATTGCTGA+TGG | 0.364745 | 5_2:+14163227 | Msa0758790:CDS |
TTTGAATTGTGGGATACATA+TGG | 0.375692 | 5_2:+14164870 | Msa0758790:CDS |
GGCCAAGATGGCCCTACTTC+AGG | 0.378146 | 5_2:+14169595 | Msa0758790:CDS |
AGTAGATGAAGCGGCTAAGC+TGG | 0.382670 | 5_2:+14167888 | Msa0758790:CDS |
TCGTGCTTCACATTGGTAAT+GGG | 0.382910 | 5_2:+14166802 | Msa0758790:CDS |
ATTAGAGTGTGACCTTGTTA+TGG | 0.398979 | 5_2:-14161780 | None:intergenic |
GAGTGGCTGAGTAATGCTTT+GGG | 0.399075 | 5_2:+14170265 | Msa0758790:CDS |
TAGCACTTTACGTTGGCTTT+GGG | 0.400445 | 5_2:-14171257 | None:intergenic |
GGGAATTTGGAGGAAGTTGT+TGG | 0.404121 | 5_2:+14162125 | Msa0758790:CDS |
ATAGGTAGCGTTTGAATTGT+GGG | 0.406155 | 5_2:+14164860 | Msa0758790:intron |
TTCTCATGTTGATGTTGGCC+TGG | 0.406787 | 5_2:+14169876 | Msa0758790:CDS |
AATGTAGGTTTATCCTGATC+CGG | 0.410601 | 5_2:+14167547 | Msa0758790:intron |
CAAGAGGAGGAGGAAAGTTT+CGG | 0.410641 | 5_2:+14164113 | Msa0758790:CDS |
TTCGTGCTTCACATTGGTAA+TGG | 0.413069 | 5_2:+14166801 | Msa0758790:CDS |
GCATCAACAAGTCGATTTCT+CGG | 0.413075 | 5_2:-14170980 | None:intergenic |
CTTAAGGAATCAGCATCAAC+AGG | 0.414659 | 5_2:-14167339 | None:intergenic |
AGAGTGGCTGAGTAATGCTT+TGG | 0.418202 | 5_2:+14170264 | Msa0758790:CDS |
AACAGCAGCAAGAGCACATT+AGG | 0.421486 | 5_2:+14164081 | Msa0758790:CDS |
CTATGCTGAGCAAGGTGGTC+AGG | 0.422720 | 5_2:+14166090 | Msa0758790:CDS |
TTTCAGATACTTGATTTGCT+TGG | 0.425755 | 5_2:+14164342 | Msa0758790:CDS |
AAGTGTTGTGGCAAATGTGC+TGG | 0.430083 | 5_2:+14164037 | Msa0758790:CDS |
AACAAGGTTGTAGTTTGTGC+TGG | 0.431318 | 5_2:+14170202 | Msa0758790:CDS |
ACACGCACTGGCACTGAAGT+TGG | 0.437130 | 5_2:-14162152 | None:intergenic |
ATTTCAGCTTTCTTAGCAGC+AGG | 0.441476 | 5_2:-14169569 | None:intergenic |
TACCTGAAGTAGGGCCATCT+TGG | 0.443045 | 5_2:-14169597 | None:intergenic |
TTGAATTGTGGGATACATAT+GGG | 0.443063 | 5_2:+14164871 | Msa0758790:CDS |
AACCAAAGTGTTCCAACTTC+CGG | 0.448542 | 5_2:+14161986 | Msa0758790:CDS |
TGTATGGTTAGCGGCTATAA+GGG | 0.450030 | 5_2:-14167043 | None:intergenic |
ACCCTTGATACGCATGGCTT+CGG | 0.450138 | 5_2:-14167433 | None:intergenic |
GTGTTCTGCCGTAGAATTAG+AGG | 0.450733 | 5_2:-14161755 | None:intergenic |
TATAGGTAGCGTTTGAATTG+TGG | 0.450971 | 5_2:+14164859 | Msa0758790:intron |
ATAAAATTGACATGGCATAC+AGG | 0.452723 | 5_2:+14163180 | Msa0758790:CDS |
TTTCGGCAGAACCTTAGTTA+AGG | 0.454210 | 5_2:+14164130 | Msa0758790:CDS |
TGCCGAAGCCATGCGTATCA+AGG | 0.455197 | 5_2:+14167431 | Msa0758790:CDS |
GTGTCGGAGAAAGGAGATAA+AGG | 0.459986 | 5_2:+14170226 | Msa0758790:CDS |
TGTAAGGATTACAGCTGAAA+AGG | 0.463474 | 5_2:+14169816 | Msa0758790:CDS |
TAACGCCGGAAATAATTATC+CGG | 0.465940 | 5_2:+14171068 | Msa0758790:three_prime_UTR |
CTGGTGCTCGGCCATATTCT+GGG | 0.468254 | 5_2:+14163135 | Msa0758790:CDS |
TGCATTTCTCATGTTGATGT+TGG | 0.470612 | 5_2:+14169871 | Msa0758790:CDS |
AAAACAAATGCAAAGCTGTA+AGG | 0.471642 | 5_2:+14169800 | Msa0758790:CDS |
ATGATAGTTTCAAATTTGCT+TGG | 0.474087 | 5_2:+14165295 | Msa0758790:CDS |
GTAACACATTTACAGGCAAC+TGG | 0.475309 | 5_2:+14163116 | Msa0758790:intron |
TAATTGAAGGAAAGATGAAT+AGG | 0.475962 | 5_2:-14171198 | None:intergenic |
GGGAGATGTGGTAAAGGAAA+AGG | 0.476017 | 5_2:+14170298 | Msa0758790:CDS |
GACACAACTCTAGCCGGATC+AGG | 0.476857 | 5_2:-14167560 | None:intergenic |
GGAAAAGGAGGTCTTGTAAC+GGG | 0.477542 | 5_2:+14170313 | Msa0758790:CDS |
GTAACATGTGTGTGCATGTA+TGG | 0.480970 | 5_2:-14167059 | None:intergenic |
GGGTTGTTGCGGATCACATC+AGG | 0.482984 | 5_2:+14163201 | Msa0758790:CDS |
TTTCAAATTTGCTTGGTTCA+GGG | 0.485471 | 5_2:+14165302 | Msa0758790:CDS |
TATACACAGCTAGTAAGATA+CGG | 0.488635 | 5_2:-14171133 | None:intergenic |
TAAGCTGGAAGGAAGTTTGC+TGG | 0.490814 | 5_2:+14167903 | Msa0758790:CDS |
TGTGCTGGGGTGTCGGAGAA+AGG | 0.492016 | 5_2:+14170217 | Msa0758790:CDS |
GTTGATTCTGTTAATACTGA+TGG | 0.494916 | 5_2:+14166034 | Msa0758790:CDS |
TTGTGACAGCTGTTATTCTA+CGG | 0.496737 | 5_2:-14167816 | None:intergenic |
TGTCATTTGCCATTGCTGAT+GGG | 0.498811 | 5_2:+14163228 | Msa0758790:CDS |
CAACATATAATACCTGAAGT+AGG | 0.498903 | 5_2:-14169607 | None:intergenic |
CACGAACTGCTGCAACATCC+AGG | 0.499765 | 5_2:-14169894 | None:intergenic |
GCTGAGGAGGGAATTGCTAA+AGG | 0.500043 | 5_2:+14167790 | Msa0758790:CDS |
GTTAATACTGATGGTGATGT+TGG | 0.502082 | 5_2:+14166043 | Msa0758790:CDS |
TGATGAATGCAGGAAGTACT+TGG | 0.502247 | 5_2:+14167173 | Msa0758790:intron |
TTCAGGGGAACGTACTGAGC+GGG | 0.503019 | 5_2:+14164298 | Msa0758790:CDS |
AGGAGGTCTTGTAACGGGTC+AGG | 0.503180 | 5_2:+14170318 | Msa0758790:CDS |
TCTGAATGATTTATATCCAC+AGG | 0.503684 | 5_2:-14171018 | None:intergenic |
TTTGCATAGACTTTCGATGT+TGG | 0.504113 | 5_2:+14166720 | Msa0758790:intron |
TGCTAAGAAAGCTGAAATCA+AGG | 0.509077 | 5_2:+14169574 | Msa0758790:CDS |
CTCCGTCGAGCTGTTCGCTA+TGG | 0.511679 | 5_2:+14163703 | Msa0758790:CDS |
CTACCTGTGTGAGATCTAAC+GGG | 0.513935 | 5_2:-14164896 | None:intergenic |
GCTCACGAGCTTCTTCTAGC+TGG | 0.514761 | 5_2:+14162176 | Msa0758790:CDS |
AGCTCGTGAGCTACACGCAC+TGG | 0.517304 | 5_2:-14162164 | None:intergenic |
GTCTATCCTCACCTTAACTA+AGG | 0.519096 | 5_2:-14164141 | None:intergenic |
AACGCCGGAAATAATTATCC+GGG | 0.519643 | 5_2:+14171069 | Msa0758790:three_prime_UTR |
GTGGTAAAAGCAATATATAC+TGG | 0.521169 | 5_2:+14166001 | Msa0758790:CDS |
TGTTACTGTCAGCAAGTTGG+TGG | 0.522495 | 5_2:+14165210 | Msa0758790:intron |
GTGGATATAAATCATTCAGA+AGG | 0.525019 | 5_2:+14171021 | Msa0758790:three_prime_UTR |
TATAAATCATTCAGAAGGGA+AGG | 0.525135 | 5_2:+14171026 | Msa0758790:three_prime_UTR |
ATGCTTTGGGGTCACTGAAA+GGG | 0.529281 | 5_2:+14170278 | Msa0758790:CDS |
CGCAAAATGATCTATCATGA+AGG | 0.530253 | 5_2:-14171341 | None:intergenic |
TACCGGAAGTTGGAACACTT+TGG | 0.532325 | 5_2:-14161988 | None:intergenic |
ATTGCTGATGGGTCTCGTCC+CGG | 0.532789 | 5_2:+14163239 | Msa0758790:CDS |
ATTCACGTCCTCTAATTCTA+CGG | 0.536092 | 5_2:+14161747 | Msa0758790:CDS |
AATTTGAAACTATCATCTGT+TGG | 0.537269 | 5_2:-14165288 | None:intergenic |
CCTACCTGTGTGAGATCTAA+CGG | 0.539043 | 5_2:-14164897 | None:intergenic |
AACATATAATACCTGAAGTA+GGG | 0.539900 | 5_2:-14169606 | None:intergenic |
GGAAGGAAGTTTGCTGGATG+AGG | 0.540536 | 5_2:+14167909 | Msa0758790:CDS |
AATGCTTTGGGGTCACTGAA+AGG | 0.543277 | 5_2:+14170277 | Msa0758790:CDS |
GAACTTGAAATGAAGCATGT+TGG | 0.543494 | 5_2:-14166755 | None:intergenic |
CCAACTGACACAACTCTAGC+CGG | 0.548858 | 5_2:-14167566 | None:intergenic |
CTTCACATTGGTAATGGGAC+TGG | 0.552145 | 5_2:+14166807 | Msa0758790:CDS |
TGGTTTAAAGGGGAATTTGG+AGG | 0.552343 | 5_2:+14162115 | Msa0758790:CDS |
CTGAAAGGGAGATGTGGTAA+AGG | 0.558294 | 5_2:+14170292 | Msa0758790:CDS |
TGTAGTTTGTGCTGGGGTGT+CGG | 0.558316 | 5_2:+14170210 | Msa0758790:CDS |
ACAAGGTTGTAGTTTGTGCT+GGG | 0.558406 | 5_2:+14170203 | Msa0758790:CDS |
AGCTGAAATCAAGGCCAAGA+TGG | 0.559778 | 5_2:+14169583 | Msa0758790:CDS |
CCGGCTAGAGTTGTGTCAGT+TGG | 0.560215 | 5_2:+14167566 | Msa0758790:CDS |
ACAGCTGTGGAACATGTTCA+GGG | 0.561456 | 5_2:+14164282 | Msa0758790:CDS |
CGACGTATTAAAAGCTGAAG+AGG | 0.562921 | 5_2:+14163729 | Msa0758790:CDS |
TAAACAGGGGTTATCAGTGA+TGG | 0.563816 | 5_2:+14170156 | Msa0758790:CDS |
AATGGGACTGGTATCTCTGT+TGG | 0.564833 | 5_2:+14166819 | Msa0758790:CDS |
CATGGCATACAGGGTTGTTG+CGG | 0.565636 | 5_2:+14163190 | Msa0758790:CDS |
CAACTACAAGTTGATGTCGA+AGG | 0.567680 | 5_2:+14165024 | Msa0758790:CDS |
GCATGTGATTCAAGAGGAGG+AGG | 0.569350 | 5_2:+14164103 | Msa0758790:CDS |
GGCAAACATGTATACCAGAA+AGG | 0.569840 | 5_2:+14167194 | Msa0758790:CDS |
ATCTTTCCTTCAATTATCAG+AGG | 0.570108 | 5_2:+14171205 | Msa0758790:three_prime_UTR |
TCTATTTCATCTGAATTGTG+TGG | 0.570785 | 5_2:+14167638 | Msa0758790:CDS |
ATACACAGCTAGTAAGATAC+GGG | 0.572074 | 5_2:-14171132 | None:intergenic |
TGATGCATCACGCATAAATG+AGG | 0.574360 | 5_2:+14170930 | Msa0758790:CDS |
TAAAATTGACATGGCATACA+GGG | 0.576644 | 5_2:+14163181 | Msa0758790:CDS |
GCCGAAGCCATGCGTATCAA+GGG | 0.577052 | 5_2:+14167432 | Msa0758790:CDS |
TGAGCAGCAAGTAGATGAAG+CGG | 0.577455 | 5_2:+14167879 | Msa0758790:CDS |
CATAATGTTCAAGTTTATGG+AGG | 0.577824 | 5_2:+14166777 | Msa0758790:CDS |
TCTTTCCTTCAATTATCAGA+GGG | 0.578638 | 5_2:+14171206 | Msa0758790:three_prime_UTR |
CGGCCATATTCTGGGAAAGT+CGG | 0.580129 | 5_2:+14163143 | Msa0758790:CDS |
GCTGATCTAGCTGTTAAAGA+TGG | 0.581410 | 5_2:+14169838 | Msa0758790:CDS |
ATCACGCATAAATGAGGCTA+TGG | 0.587205 | 5_2:+14170936 | Msa0758790:CDS |
GATGAAGCGGCTAAGCTGGA+AGG | 0.587596 | 5_2:+14167892 | Msa0758790:CDS |
CACTGAGGAATCTACAAACA+AGG | 0.589743 | 5_2:+14170186 | Msa0758790:CDS |
ATTTACAGGCAACTGGTGCT+CGG | 0.594779 | 5_2:+14163123 | Msa0758790:intron |
AGATGTGGTAAAGGAAAAGG+AGG | 0.595385 | 5_2:+14170301 | Msa0758790:CDS |
TTCTGGGAAAGTCGGACCAA+GGG | 0.599667 | 5_2:+14163151 | Msa0758790:CDS |
AGTGTTGTGGCAAATGTGCT+GGG | 0.603198 | 5_2:+14164038 | Msa0758790:CDS |
TTGGATGTAAATGCAAAGGA+GGG | 0.603719 | 5_2:+14167402 | Msa0758790:CDS |
TTGAAGTAATCTGTTAACGC+CGG | 0.604455 | 5_2:+14171054 | Msa0758790:three_prime_UTR |
TTTCGTTCTCAGGGTCAGCA+AGG | 0.607814 | 5_2:-14167607 | None:intergenic |
TGGCAACAAAGTAGTATGCA+AGG | 0.607863 | 5_2:+14166839 | Msa0758790:CDS |
CCGCAGACCCTTGATACGCA+TGG | 0.609092 | 5_2:-14167439 | None:intergenic |
ATAATGCTCTTGTATAAACC+CGG | 0.611027 | 5_2:-14171087 | None:intergenic |
GATACGGGTATCCGTTGGTG+TGG | 0.617383 | 5_2:-14171117 | None:intergenic |
GCAAGCGGCGGAGACATCAA+AGG | 0.618010 | 5_2:-14161720 | None:intergenic |
TGGATATAAATCATTCAGAA+GGG | 0.618095 | 5_2:+14171022 | Msa0758790:three_prime_UTR |
GGAGGTTTCGTGCTTCACAT+TGG | 0.619470 | 5_2:+14166795 | Msa0758790:CDS |
TGCGAAATTTAAGACAGCTG+TGG | 0.620526 | 5_2:+14164269 | Msa0758790:CDS |
GCACGATGTGTGGTTTAAAG+GGG | 0.620601 | 5_2:+14162105 | Msa0758790:intron |
AGTTGGTGGTGCTATTGTCA+TGG | 0.620882 | 5_2:+14165224 | Msa0758790:CDS |
GTCCATAGCGAACAGCTCGA+CGG | 0.621482 | 5_2:-14163705 | None:intergenic |
ACAAGCTTCTATGCTGAGCA+AGG | 0.625524 | 5_2:+14166082 | Msa0758790:CDS |
ATTGGATGTAAATGCAAAGG+AGG | 0.628352 | 5_2:+14167401 | Msa0758790:CDS |
GTCTTAGGACCATGAGAGTG+TGG | 0.631834 | 5_2:+14165982 | Msa0758790:intron |
TCAGGGGAACGTACTGAGCG+GGG | 0.634186 | 5_2:+14164299 | Msa0758790:CDS |
GTGTGTGCATGTATGGTTAG+CGG | 0.634249 | 5_2:-14167052 | None:intergenic |
GGGACGAGACCCATCAGCAA+TGG | 0.635525 | 5_2:-14163237 | None:intergenic |
GACGTATTAAAAGCTGAAGA+GGG | 0.636943 | 5_2:+14163730 | Msa0758790:CDS |
CAATGATGTATATTCTCCTG+TGG | 0.640340 | 5_2:+14171002 | Msa0758790:three_prime_UTR |
ATAAATCATTCAGAAGGGAA+GGG | 0.640871 | 5_2:+14171027 | Msa0758790:three_prime_UTR |
GGCAGAACACGACCATAACA+AGG | 0.641310 | 5_2:+14161768 | Msa0758790:CDS |
TAGGCATGTGATTCAAGAGG+AGG | 0.642062 | 5_2:+14164100 | Msa0758790:CDS |
ATTTCATCTGAATTGTGTGG+CGG | 0.642488 | 5_2:+14167641 | Msa0758790:CDS |
AGTGGCTGAGTAATGCTTTG+GGG | 0.644347 | 5_2:+14170266 | Msa0758790:CDS |
ATTCTGGGAAAGTCGGACCA+AGG | 0.646320 | 5_2:+14163150 | Msa0758790:CDS |
TTATTAATCATCCACACCAA+CGG | 0.646378 | 5_2:+14171106 | Msa0758790:three_prime_UTR |
AGTAAGATACGGGTATCCGT+TGG | 0.647642 | 5_2:-14171122 | None:intergenic |
AGGAAAAGGAGGTCTTGTAA+CGG | 0.647670 | 5_2:+14170312 | Msa0758790:CDS |
GTGTCACTAGCACTTTACGT+TGG | 0.648960 | 5_2:-14171264 | None:intergenic |
TGAATTGGATGTAAATGCAA+AGG | 0.649794 | 5_2:+14167398 | Msa0758790:CDS |
CATTAGGCATGTGATTCAAG+AGG | 0.650394 | 5_2:+14164097 | Msa0758790:CDS |
GGGTCACTGAAAGGGAGATG+TGG | 0.655092 | 5_2:+14170286 | Msa0758790:CDS |
GGATGTTGCAGCAGTTCGTG+AGG | 0.665110 | 5_2:+14169897 | Msa0758790:CDS |
CAAGGTTGTAGTTTGTGCTG+GGG | 0.666393 | 5_2:+14170204 | Msa0758790:CDS |
GGATGCAGATAAAATTGACA+TGG | 0.670809 | 5_2:+14163172 | Msa0758790:CDS |
AGGACGTGAATGAAAGCAAG+CGG | 0.673997 | 5_2:-14161735 | None:intergenic |
AATCAGGCTTGTAAGTGTTG+TGG | 0.679087 | 5_2:+14164025 | Msa0758790:intron |
ACATATTTCAAACACACGAG+AGG | 0.690196 | 5_2:+14167747 | Msa0758790:CDS |
GGGGAACGTACTGAGCGGGG+AGG | 0.695954 | 5_2:+14164302 | Msa0758790:CDS |
AAAGATGAATAGGACAGACA+AGG | 0.697668 | 5_2:-14171188 | None:intergenic |
ACGTGAATGAAAGCAAGCGG+CGG | 0.698419 | 5_2:-14161732 | None:intergenic |
GCAATGTTTAATGATAAACA+GGG | 0.700910 | 5_2:+14170142 | Msa0758790:CDS |
AGCTTCTATGCTGAGCAAGG+TGG | 0.702055 | 5_2:+14166085 | Msa0758790:CDS |
CAATGTTTAATGATAAACAG+GGG | 0.703838 | 5_2:+14170143 | Msa0758790:CDS |
CAGCTGTGGAACATGTTCAG+GGG | 0.704327 | 5_2:+14164283 | Msa0758790:CDS |
TGGATGTAAATGCAAAGGAG+GGG | 0.709884 | 5_2:+14167403 | Msa0758790:CDS |
CCATGCGTATCAAGGGTCTG+CGG | 0.712151 | 5_2:+14167439 | Msa0758790:CDS |
GTTCAGGGGAACGTACTGAG+CGG | 0.716267 | 5_2:+14164297 | Msa0758790:CDS |
GTAAATTGGATGTATCAGAG+TGG | 0.743531 | 5_2:+14170248 | Msa0758790:CDS |
GTTCCCGTTAGATCTCACAC+AGG | 0.766218 | 5_2:+14164893 | Msa0758790:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAAATTATAAAGAAAAG+TGG | - | chr5_2:14162714-14162733 | None:intergenic | 10.0% |
!!! | AAAGGTATAAAATATATTTT+GGG | - | chr5_2:14162835-14162854 | None:intergenic | 10.0% |
!!! | AATTTTCTTACATTTATTAA+TGG | + | chr5_2:14163450-14163469 | Msa0758790:intron | 10.0% |
!!! | TTAGTTACTTATTTTATAAT+TGG | + | chr5_2:14164384-14164403 | Msa0758790:intron | 10.0% |
!!! | TAGTTACTTATTTTATAATT+GGG | + | chr5_2:14164385-14164404 | Msa0758790:intron | 10.0% |
!!! | TTGTTTGTTTTAATATTAAA+TGG | - | chr5_2:14164427-14164446 | None:intergenic | 10.0% |
!! | ATGATATTATAACTATATAT+AGG | - | chr5_2:14169732-14169751 | None:intergenic | 10.0% |
!! | AAAATCTTCCAAATTTAATA+AGG | + | chr5_2:14161942-14161961 | Msa0758790:CDS | 15.0% |
!! | AAATCTTCCAAATTTAATAA+GGG | + | chr5_2:14161943-14161962 | Msa0758790:CDS | 15.0% |
!!! | CAAAGGTATAAAATATATTT+TGG | - | chr5_2:14162836-14162855 | None:intergenic | 15.0% |
!!! | CAAAATATATTTTATACCTT+TGG | + | chr5_2:14162834-14162853 | Msa0758790:intron | 15.0% |
!!! | GTTTATCCTTTAATTTTATT+AGG | - | chr5_2:14165133-14165152 | None:intergenic | 15.0% |
!!! | TATTTTATTTTGTGACTATA+AGG | - | chr5_2:14165476-14165495 | None:intergenic | 15.0% |
!! | TTGAAGTGAAAAAAAAAAAA+AGG | + | chr5_2:14165804-14165823 | Msa0758790:intron | 15.0% |
!! | TGAAGTGAAAAAAAAAAAAA+GGG | + | chr5_2:14165805-14165824 | Msa0758790:intron | 15.0% |
!!! | ATTTGCTTTAATTTAATTGA+AGG | + | chr5_2:14166162-14166181 | Msa0758790:intron | 15.0% |
!!! | TGTTTTTTAATTATTTTTGC+AGG | + | chr5_2:14167002-14167021 | Msa0758790:intron | 15.0% |
!! | ATAGTGAATAAAAACTATTA+AGG | - | chr5_2:14167300-14167319 | None:intergenic | 15.0% |
!!! | TTGTAAAGGATTTTTTTAAA+TGG | - | chr5_2:14168599-14168618 | None:intergenic | 15.0% |
!!! | ATTTTAGGAAATAAAAATGA+AGG | + | chr5_2:14169251-14169270 | Msa0758790:intron | 15.0% |
!!! | TTTTAGGAAATAAAAATGAA+GGG | + | chr5_2:14169252-14169271 | Msa0758790:intron | 15.0% |
!! | TATAATATCATAATTCTTGT+AGG | + | chr5_2:14169741-14169760 | Msa0758790:intron | 15.0% |
!! | ATAATTTATTAAGAATCTTG+CGG | + | chr5_2:14169960-14169979 | Msa0758790:intron | 15.0% |
!!! | TTTAATGTATAAAATGCTTT+TGG | + | chr5_2:14170024-14170043 | Msa0758790:intron | 15.0% |
!! | TAAAATGACATAAAATGAAA+TGG | - | chr5_2:14170390-14170409 | None:intergenic | 15.0% |
!!! | ATTTCATTTTATGTCATTTT+AGG | + | chr5_2:14170389-14170408 | Msa0758790:intron | 15.0% |
!! | ATTTATAAACGACTTATATT+TGG | + | chr5_2:14170462-14170481 | Msa0758790:intron | 15.0% |
!! | TATATAGAGATATAGAAGAA+TGG | - | chr5_2:14161810-14161829 | None:intergenic | 20.0% |
!! | TAAAGTAACCAATTTAATCA+AGG | + | chr5_2:14162221-14162240 | Msa0758790:intron | 20.0% |
!! | TATTTAAGCCTTGATTAAAT+TGG | - | chr5_2:14162232-14162251 | None:intergenic | 20.0% |
!!! | CATAATAGTTTTGTAGTTTT+AGG | - | chr5_2:14162295-14162314 | None:intergenic | 20.0% |
!!! | AAACTTGAAAGAATTTTCAA+TGG | - | chr5_2:14162656-14162675 | None:intergenic | 20.0% |
!!! | AAGTGGTTGTTATATTTTAA+TGG | - | chr5_2:14162697-14162716 | None:intergenic | 20.0% |
!!! | GTATAAAATATATTTTGGGA+AGG | - | chr5_2:14162831-14162850 | None:intergenic | 20.0% |
!! | ATATTCATATTCCGAATTAT+TGG | + | chr5_2:14163000-14163019 | Msa0758790:intron | 20.0% |
!! | AATGTAAGAAAATTGTTAAG+TGG | - | chr5_2:14163444-14163463 | None:intergenic | 20.0% |
!! | ATTATGGTATTTCAATGATA+GGG | + | chr5_2:14163600-14163619 | Msa0758790:intron | 20.0% |
!! | ATGAAATCATAACAAACTTA+TGG | - | chr5_2:14163639-14163658 | None:intergenic | 20.0% |
!!! | GTTATGATTTCATATTTTGA+AGG | + | chr5_2:14163646-14163665 | Msa0758790:intron | 20.0% |
!!! | ACGAGTTTTAGATATTTAAA+TGG | - | chr5_2:14163855-14163874 | None:intergenic | 20.0% |
!!! | GAGTTATTTTTGTTTTGTAA+AGG | + | chr5_2:14164210-14164229 | Msa0758790:intron | 20.0% |
!!! | TTTGTTTTGTAAAGGAATAA+AGG | + | chr5_2:14164218-14164237 | Msa0758790:intron | 20.0% |
!! | AAGTTGTACATGATAAATTA+CGG | - | chr5_2:14164686-14164705 | None:intergenic | 20.0% |
!!! | TTAGTTTAGTAGTTTTTTGA+TGG | + | chr5_2:14164800-14164819 | Msa0758790:intron | 20.0% |
!!! | TAGTTTAGTAGTTTTTTGAT+GGG | + | chr5_2:14164801-14164820 | Msa0758790:intron | 20.0% |
!! | AACACACCTAATAAAATTAA+AGG | + | chr5_2:14165124-14165143 | Msa0758790:intron | 20.0% |
!! | ACCATTGAAAATATAAATAC+TGG | + | chr5_2:14165157-14165176 | Msa0758790:intron | 20.0% |
!!! | ACCAGTATTTATATTTTCAA+TGG | - | chr5_2:14165161-14165180 | None:intergenic | 20.0% |
!!! | TTTTTTTTTCACTTCAATAG+CGG | - | chr5_2:14165801-14165820 | None:intergenic | 20.0% |
!!! | TTGTTTGCAATAATTGATTT+TGG | + | chr5_2:14166390-14166409 | Msa0758790:intron | 20.0% |
!! | TCGTAGTAATTTAATAAAAG+AGG | + | chr5_2:14166569-14166588 | Msa0758790:intron | 20.0% |
!! | CGTAGTAATTTAATAAAAGA+GGG | + | chr5_2:14166570-14166589 | Msa0758790:intron | 20.0% |
!!! | AAGAGGTTTTTATGTAAAAA+GGG | - | chr5_2:14166932-14166951 | None:intergenic | 20.0% |
!!! | AAAGAGGTTTTTATGTAAAA+AGG | - | chr5_2:14166933-14166952 | None:intergenic | 20.0% |
!! | AATAATTCTTACAGTCTTAA+TGG | - | chr5_2:14167275-14167294 | None:intergenic | 20.0% |
!! | TCAATATTCTACTTTAATGT+AGG | + | chr5_2:14167532-14167551 | Msa0758790:intron | 20.0% |
!!! | ACAAACATTTTCTTGTTTTT+TGG | + | chr5_2:14168122-14168141 | Msa0758790:intron | 20.0% |
!!! | GTAGAACAAAAGATTTTTAA+AGG | + | chr5_2:14168250-14168269 | Msa0758790:intron | 20.0% |
!!! | CATTCTTTGAAAATATGAAA+TGG | + | chr5_2:14168304-14168323 | Msa0758790:intron | 20.0% |
!! | TATGATATAAAATTTGACAC+AGG | + | chr5_2:14168748-14168767 | Msa0758790:intron | 20.0% |
!! | ATGATATAAAATTTGACACA+GGG | + | chr5_2:14168749-14168768 | Msa0758790:intron | 20.0% |
!!! | AGACCTAATAAGTTTTTTAA+CGG | + | chr5_2:14168784-14168803 | Msa0758790:intron | 20.0% |
!!! | TAATTCTCAATGAGAATTTT+AGG | + | chr5_2:14169236-14169255 | Msa0758790:intron | 20.0% |
!!! | CAATAAAAAGTATACAAAAG+TGG | - | chr5_2:14169674-14169693 | None:intergenic | 20.0% |
!! | GTATATTATATACAAATCCA+TGG | - | chr5_2:14170496-14170515 | None:intergenic | 20.0% |
!! | AACTAAAACTGATATTACAT+TGG | - | chr5_2:14170534-14170553 | None:intergenic | 20.0% |
!!! | TAGTCATTTTGAATTTCTTA+TGG | + | chr5_2:14170774-14170793 | Msa0758790:intron | 20.0% |
!!! | ATTTGATGATAGAAATATTC+AGG | - | chr5_2:14170818-14170837 | None:intergenic | 20.0% |
! | TCTATGTCCCTTATTAAATT+TGG | - | chr5_2:14161953-14161972 | None:intergenic | 25.0% |
! | TTATTAGAAACCGAGTAAAT+AGG | + | chr5_2:14162385-14162404 | Msa0758790:intron | 25.0% |
! | TATTAGAAACCGAGTAAATA+GGG | + | chr5_2:14162386-14162405 | Msa0758790:intron | 25.0% |
!!! | GTTGTTATATTTTAATGGTG+GGG | - | chr5_2:14162692-14162711 | None:intergenic | 25.0% |
!!! | GGTTGTTATATTTTAATGGT+GGG | - | chr5_2:14162693-14162712 | None:intergenic | 25.0% |
!!! | TGGTTGTTATATTTTAATGG+TGG | - | chr5_2:14162694-14162713 | None:intergenic | 25.0% |
!! | AAACTTGAGAGAATTTTCAA+TGG | + | chr5_2:14162778-14162797 | Msa0758790:intron | 25.0% |
!!! | TATTTTATACCTTTGGAGTT+TGG | + | chr5_2:14162841-14162860 | Msa0758790:intron | 25.0% |
!!! | TTTTTTTTTATCAACCCAAG+TGG | - | chr5_2:14163500-14163519 | None:intergenic | 25.0% |
!!! | TCTCACTCACTTTAAAATTT+AGG | + | chr5_2:14163568-14163587 | Msa0758790:intron | 25.0% |
!! | ATTTAGGATATCCATGATTA+TGG | + | chr5_2:14163584-14163603 | Msa0758790:intron | 25.0% |
! | TCATTGAAATACCATAATCA+TGG | - | chr5_2:14163598-14163617 | None:intergenic | 25.0% |
! | GATTATGGTATTTCAATGAT+AGG | + | chr5_2:14163599-14163618 | Msa0758790:intron | 25.0% |
!!! | TCATATTTTGAAGGTAATGA+AGG | + | chr5_2:14163655-14163674 | Msa0758790:intron | 25.0% |
! | GGTAAGAAAGATTTAGATAT+GGG | - | chr5_2:14163814-14163833 | None:intergenic | 25.0% |
! | TGGTAAGAAAGATTTAGATA+TGG | - | chr5_2:14163815-14163834 | None:intergenic | 25.0% |
! | TTAGATATTTAAATGGCACT+AGG | - | chr5_2:14163848-14163867 | None:intergenic | 25.0% |
! | AAATTTGATGCACTTGTTTA+GGG | + | chr5_2:14163900-14163919 | Msa0758790:intron | 25.0% |
! | AACTTATAGTCTGTTTACAA+TGG | + | chr5_2:14163977-14163996 | Msa0758790:intron | 25.0% |
!! | GATGTTTCTATCTTTAATCT+TGG | + | chr5_2:14163999-14164018 | Msa0758790:intron | 25.0% |
!! | AAACTTGATGAAATTTTCAG+TGG | + | chr5_2:14164445-14164464 | Msa0758790:intron | 25.0% |
!! | GTGAAATTCTTTTCATTTCT+AGG | + | chr5_2:14164500-14164519 | Msa0758790:intron | 25.0% |
!! | TATAACTTTTCAATCTCACT+AGG | + | chr5_2:14164575-14164594 | Msa0758790:intron | 25.0% |
!!! | AGTTTAGTAGTTTTTTGATG+GGG | + | chr5_2:14164802-14164821 | Msa0758790:intron | 25.0% |
! | CATAAGCTGATAAATTGAAA+AGG | - | chr5_2:14164992-14165011 | None:intergenic | 25.0% |
!! | CTTTTCAATTTATCAGCTTA+TGG | + | chr5_2:14164990-14165009 | Msa0758790:intron | 25.0% |
!! | AATTTGAAACTATCATCTGT+TGG | - | chr5_2:14165291-14165310 | None:intergenic | 25.0% |
!! | ATGATAGTTTCAAATTTGCT+TGG | + | chr5_2:14165295-14165314 | Msa0758790:CDS | 25.0% |
! | TTTAATAGTTGAAGATACCA+AGG | + | chr5_2:14165361-14165380 | Msa0758790:intron | 25.0% |
! | TTAATAGTTGAAGATACCAA+GGG | + | chr5_2:14165362-14165381 | Msa0758790:intron | 25.0% |
!!! | TTAGTAAGGTTTTAGGATTT+GGG | - | chr5_2:14165744-14165763 | None:intergenic | 25.0% |
! | AAATCCTAAAACCTTACTAA+GGG | + | chr5_2:14165744-14165763 | Msa0758790:intron | 25.0% |
! | TAGAAATCAATGGAAAAAGT+AGG | - | chr5_2:14165946-14165965 | None:intergenic | 25.0% |
! | TGGTGAAAAATAGAAATCAA+TGG | - | chr5_2:14165956-14165975 | None:intergenic | 25.0% |
! | ATTTAATTGAAGGCTATTGT+TGG | + | chr5_2:14166172-14166191 | Msa0758790:intron | 25.0% |
! | ACTAAAAGATGATATGTTCA+AGG | + | chr5_2:14166365-14166384 | Msa0758790:intron | 25.0% |
! | CTAAAAGATGATATGTTCAA+GGG | + | chr5_2:14166366-14166385 | Msa0758790:intron | 25.0% |
!! | GTTCATAATGTTCAAGTTTA+TGG | + | chr5_2:14166774-14166793 | Msa0758790:CDS | 25.0% |
! | GAAAGATAAGTAGATAAGTA+GGG | - | chr5_2:14166956-14166975 | None:intergenic | 25.0% |
! | TGAAAGATAAGTAGATAAGT+AGG | - | chr5_2:14166957-14166976 | None:intergenic | 25.0% |
!!! | TTATTTTTGCAGGTTGATTA+TGG | + | chr5_2:14167012-14167031 | Msa0758790:intron | 25.0% |
! | TAATTTCATATGATGAATGC+AGG | + | chr5_2:14167163-14167182 | Msa0758790:intron | 25.0% |
!! | AAATCAAATCTCAGTTTTTC+AGG | - | chr5_2:14167233-14167252 | None:intergenic | 25.0% |
!! | AATTGACTCAATTCTTCTTA+AGG | - | chr5_2:14167358-14167377 | None:intergenic | 25.0% |
! | AAGTAGAATATTGAAGAATG+TGG | - | chr5_2:14167526-14167545 | None:intergenic | 25.0% |
!! | TTCAAAGAAAACATTAGCTT+TGG | - | chr5_2:14167673-14167692 | None:intergenic | 25.0% |
!!! | TCATTTTTACTTGATGATCT+AGG | + | chr5_2:14167721-14167740 | Msa0758790:intron | 25.0% |
!! | TTTGTCTAAATTTTACTAGC+AGG | + | chr5_2:14167948-14167967 | Msa0758790:intron | 25.0% |
!!! | CTATAACATGTGTTTTTGTT+AGG | - | chr5_2:14168184-14168203 | None:intergenic | 25.0% |
! | AGTTGTAGAAAGAAAAAAAG+AGG | - | chr5_2:14168432-14168451 | None:intergenic | 25.0% |
!! | TTTCTACAACTCCATTTTAA+TGG | + | chr5_2:14168441-14168460 | Msa0758790:intron | 25.0% |
!!! | TTCTACAACTCCATTTTAAT+GGG | + | chr5_2:14168442-14168461 | Msa0758790:intron | 25.0% |
!!! | TTTTTTTTCTCTCGTGAAAA+TGG | - | chr5_2:14168500-14168519 | None:intergenic | 25.0% |
! | CAAAGAATATACACAATGTT+GGG | - | chr5_2:14168528-14168547 | None:intergenic | 25.0% |
! | TAGCCGTTAAAAAACTTATT+AGG | - | chr5_2:14168790-14168809 | None:intergenic | 25.0% |
! | TCGCTATGAATAAAAGAAAA+AGG | + | chr5_2:14168830-14168849 | Msa0758790:intron | 25.0% |
! | ACCTTTATATGATATAGCTT+AGG | + | chr5_2:14168975-14168994 | Msa0758790:intron | 25.0% |
! | TCCTAAGCTATATCATATAA+AGG | - | chr5_2:14168979-14168998 | None:intergenic | 25.0% |
!!! | GTTTTAAATTACCCAAACTA+AGG | + | chr5_2:14169006-14169025 | Msa0758790:intron | 25.0% |
! | AACTAAAAAATGTTCAAAGC+AGG | + | chr5_2:14169075-14169094 | Msa0758790:intron | 25.0% |
!!! | ATCCTAGTTTTGAATAACAT+TGG | - | chr5_2:14169136-14169155 | None:intergenic | 25.0% |
! | AACCAAAGAGAAATAAAAAG+CGG | - | chr5_2:14169503-14169522 | None:intergenic | 25.0% |
! | AACATATAATACCTGAAGTA+GGG | - | chr5_2:14169609-14169628 | None:intergenic | 25.0% |
! | AAGTATACAAAAGTGGAATA+GGG | - | chr5_2:14169667-14169686 | None:intergenic | 25.0% |
! | AAAGTATACAAAAGTGGAAT+AGG | - | chr5_2:14169668-14169687 | None:intergenic | 25.0% |
! | AGCAATGTTTAATGATAAAC+AGG | + | chr5_2:14170141-14170160 | Msa0758790:CDS | 25.0% |
! | GCAATGTTTAATGATAAACA+GGG | + | chr5_2:14170142-14170161 | Msa0758790:CDS | 25.0% |
! | CAATGTTTAATGATAAACAG+GGG | + | chr5_2:14170143-14170162 | Msa0758790:CDS | 25.0% |
!! | TATGTTTCGTCAAATTTTCA+CGG | + | chr5_2:14170665-14170684 | Msa0758790:intron | 25.0% |
! | TGGATATAAATCATTCAGAA+GGG | + | chr5_2:14171022-14171041 | Msa0758790:three_prime_UTR | 25.0% |
! | TAATTGAAGGAAAGATGAAT+AGG | - | chr5_2:14171201-14171220 | None:intergenic | 25.0% |
!! | TCAACACTTTTTACACTTAC+CGG | - | chr5_2:14162008-14162027 | None:intergenic | 30.0% |
ACCTTACATCCAAATACTTA+TGG | - | chr5_2:14162202-14162221 | None:intergenic | 30.0% | |
!!! | GGATTTGAGTTGAATTTTGA+GGG | + | chr5_2:14162425-14162444 | Msa0758790:intron | 30.0% |
!!! | GATTTGAGTTGAATTTTGAG+GGG | + | chr5_2:14162426-14162445 | Msa0758790:intron | 30.0% |
!!! | ATTTGAGTTGAATTTTGAGG+GGG | + | chr5_2:14162427-14162446 | Msa0758790:intron | 30.0% |
TTAGATATGCTTAAACCTAC+AGG | - | chr5_2:14162528-14162547 | None:intergenic | 30.0% | |
! | TACTTCTCTGATTTTCTGTT+TGG | + | chr5_2:14162557-14162576 | Msa0758790:intron | 30.0% |
! | ACTTCTCTGATTTTCTGTTT+GGG | + | chr5_2:14162558-14162577 | Msa0758790:intron | 30.0% |
ATAGATTATCAAACAGACCT+AGG | - | chr5_2:14162602-14162621 | None:intergenic | 30.0% | |
AACAGAGAGTCATAAAGTTA+AGG | - | chr5_2:14162873-14162892 | None:intergenic | 30.0% | |
TACTTGCATAAATTCTCTTG+AGG | - | chr5_2:14162898-14162917 | None:intergenic | 30.0% | |
CATGCGTTAATCCAATAATT+CGG | - | chr5_2:14163014-14163033 | None:intergenic | 30.0% | |
! | TTTTCCTGTAACACATTTAC+AGG | + | chr5_2:14163109-14163128 | Msa0758790:intron | 30.0% |
ATAAAATTGACATGGCATAC+AGG | + | chr5_2:14163180-14163199 | Msa0758790:CDS | 30.0% | |
TAAAATTGACATGGCATACA+GGG | + | chr5_2:14163181-14163200 | Msa0758790:CDS | 30.0% | |
ACTTGGTATCTTTATTGACA+AGG | + | chr5_2:14163275-14163294 | Msa0758790:intron | 30.0% | |
CAAATTTGATGCACTTGTTT+AGG | + | chr5_2:14163899-14163918 | Msa0758790:intron | 30.0% | |
TAAGTTCACAAATTTATGCC+TGG | - | chr5_2:14163963-14163982 | None:intergenic | 30.0% | |
TCTTTAATCTTGGTGAAATC+AGG | + | chr5_2:14164009-14164028 | Msa0758790:intron | 30.0% | |
! | ATGTGTGAAGACGTTTTTAT+GGG | + | chr5_2:14164164-14164183 | Msa0758790:intron | 30.0% |
!!! | TTTTATGGGTTGTCACTTTT+TGG | + | chr5_2:14164178-14164197 | Msa0758790:intron | 30.0% |
!! | TTTCAGATACTTGATTTGCT+TGG | + | chr5_2:14164342-14164361 | Msa0758790:CDS | 30.0% |
!!! | GTGTTATTTAAGCACAGTTT+TGG | + | chr5_2:14164657-14164676 | Msa0758790:intron | 30.0% |
GAACATACATAAAAACACAG+AGG | + | chr5_2:14164717-14164736 | Msa0758790:intron | 30.0% | |
ACTGTATGAGAAATAGTTCA+GGG | - | chr5_2:14164828-14164847 | None:intergenic | 30.0% | |
AACTGTATGAGAAATAGTTC+AGG | - | chr5_2:14164829-14164848 | None:intergenic | 30.0% | |
TACAGTTGTCTCTTGATTAT+AGG | + | chr5_2:14164842-14164861 | Msa0758790:intron | 30.0% | |
TTTGAATTGTGGGATACATA+TGG | + | chr5_2:14164870-14164889 | Msa0758790:CDS | 30.0% | |
TTGAATTGTGGGATACATAT+GGG | + | chr5_2:14164871-14164890 | Msa0758790:CDS | 30.0% | |
GCTGATAAATTGAAAAGGTT+AGG | - | chr5_2:14164987-14165006 | None:intergenic | 30.0% | |
ATCAAGAACTGCTCAAAATA+AGG | + | chr5_2:14165080-14165099 | Msa0758790:CDS | 30.0% | |
AACAAAAGAGAGTTGAGTAA+GGG | - | chr5_2:14165194-14165213 | None:intergenic | 30.0% | |
TAACAAAAGAGAGTTGAGTA+AGG | - | chr5_2:14165195-14165214 | None:intergenic | 30.0% | |
! | TTTCAAATTTGCTTGGTTCA+GGG | + | chr5_2:14165302-14165321 | Msa0758790:CDS | 30.0% |
TAATAGTTGAAGATACCAAG+GGG | + | chr5_2:14165363-14165382 | Msa0758790:intron | 30.0% | |
TTTAAATTTACCCGAGTCAT+TGG | - | chr5_2:14165649-14165668 | None:intergenic | 30.0% | |
GGATAATAATGAGAACCATA+GGG | - | chr5_2:14165723-14165742 | None:intergenic | 30.0% | |
!!! | CTTAGTAAGGTTTTAGGATT+TGG | - | chr5_2:14165745-14165764 | None:intergenic | 30.0% |
CAAATCCTAAAACCTTACTA+AGG | + | chr5_2:14165743-14165762 | Msa0758790:intron | 30.0% | |
AAGATCAAAAACTTCCATGA+AGG | - | chr5_2:14165834-14165853 | None:intergenic | 30.0% | |
! | TTTTCACCATTTCTTGTCTT+AGG | + | chr5_2:14165967-14165986 | Msa0758790:intron | 30.0% |
GTGGTAAAAGCAATATATAC+TGG | + | chr5_2:14166001-14166020 | Msa0758790:CDS | 30.0% | |
! | GTTGATTCTGTTAATACTGA+TGG | + | chr5_2:14166034-14166053 | Msa0758790:CDS | 30.0% |
TAGATGAGAGAGAAAGTTAA+GGG | - | chr5_2:14166462-14166481 | None:intergenic | 30.0% | |
ATAGATGAGAGAGAAAGTTA+AGG | - | chr5_2:14166463-14166482 | None:intergenic | 30.0% | |
TGTTTAATGTAAGAAACGTG+AGG | + | chr5_2:14166537-14166556 | Msa0758790:intron | 30.0% | |
! | ATTTAATTTCAGTACCCTGT+TGG | + | chr5_2:14166600-14166619 | Msa0758790:intron | 30.0% |
! | CATAATGTTCAAGTTTATGG+AGG | + | chr5_2:14166777-14166796 | Msa0758790:CDS | 30.0% |
! | TTTTTATGTAAAAAGGGAGG+GGG | - | chr5_2:14166926-14166945 | None:intergenic | 30.0% |
! | GTTTTTATGTAAAAAGGGAG+GGG | - | chr5_2:14166927-14166946 | None:intergenic | 30.0% |
! | GGTTTTTATGTAAAAAGGGA+GGG | - | chr5_2:14166928-14166947 | None:intergenic | 30.0% |
! | AGGTTTTTATGTAAAAAGGG+AGG | - | chr5_2:14166929-14166948 | None:intergenic | 30.0% |
!!! | TACCTTTTGATGCTTTGTTT+TGG | + | chr5_2:14166978-14166997 | Msa0758790:intron | 30.0% |
! | AACCAAAACAAAGCATCAAA+AGG | - | chr5_2:14166983-14167002 | None:intergenic | 30.0% |
! | ACATGTTACATTTTGCTCTT+AGG | + | chr5_2:14167073-14167092 | Msa0758790:CDS | 30.0% |
! | CATGTTACATTTTGCTCTTA+GGG | + | chr5_2:14167074-14167093 | Msa0758790:CDS | 30.0% |
ATCAGTGAATGGAATTAGTA+AGG | - | chr5_2:14167126-14167145 | None:intergenic | 30.0% | |
!! | CTGAGATTTGATTTTTCTCA+CGG | + | chr5_2:14167239-14167258 | Msa0758790:CDS | 30.0% |
!! | ATTTGATTTTTCTCACGGTA+TGG | + | chr5_2:14167244-14167263 | Msa0758790:intron | 30.0% |
TGAGCAAATTAATGCTGAAT+TGG | + | chr5_2:14167383-14167402 | Msa0758790:CDS | 30.0% | |
TGAATTGGATGTAAATGCAA+AGG | + | chr5_2:14167398-14167417 | Msa0758790:CDS | 30.0% | |
!! | ATAACCATTTTTCGTTCTCA+GGG | - | chr5_2:14167619-14167638 | None:intergenic | 30.0% |
TCTATTTCATCTGAATTGTG+TGG | + | chr5_2:14167638-14167657 | Msa0758790:CDS | 30.0% | |
TGCTCTTGATGCAATTAAAA+TGG | + | chr5_2:14167846-14167865 | Msa0758790:CDS | 30.0% | |
!!! | TTTTCCATTCTAGTTCTAGT+TGG | + | chr5_2:14167979-14167998 | Msa0758790:intron | 30.0% |
CAAAAACACATGTTATAGCA+CGG | + | chr5_2:14168186-14168205 | Msa0758790:intron | 30.0% | |
AAAAACACATGTTATAGCAC+GGG | + | chr5_2:14168187-14168206 | Msa0758790:intron | 30.0% | |
!!! | TCTTTTGAAACACAAGTAAC+TGG | + | chr5_2:14168277-14168296 | Msa0758790:intron | 30.0% |
AGAAAAAAAGAGGCAGTTAT+TGG | - | chr5_2:14168422-14168441 | None:intergenic | 30.0% | |
!! | TCTACAACTCCATTTTAATG+GGG | + | chr5_2:14168443-14168462 | Msa0758790:intron | 30.0% |
GCAAAGAATATACACAATGT+TGG | - | chr5_2:14168529-14168548 | None:intergenic | 30.0% | |
AATCTCTACACTAGACAATT+GGG | + | chr5_2:14168690-14168709 | Msa0758790:intron | 30.0% | |
!!! | ATAAGTTTTTTAACGGCTAC+AGG | + | chr5_2:14168791-14168810 | Msa0758790:intron | 30.0% |
!! | ATAAAAGAAAAAGGCATCGA+TGG | + | chr5_2:14168839-14168858 | Msa0758790:intron | 30.0% |
! | ATCGTTCTCATTTTCCATTA+TGG | - | chr5_2:14168874-14168893 | None:intergenic | 30.0% |
TATGATATAGCTTAGGAAAC+AGG | + | chr5_2:14168982-14169001 | Msa0758790:intron | 30.0% | |
AAAGCAGGAACTTATTAGTT+TGG | + | chr5_2:14169090-14169109 | Msa0758790:intron | 30.0% | |
GTCCAATGTTATTCAAAACT+AGG | + | chr5_2:14169131-14169150 | Msa0758790:intron | 30.0% | |
CATAATAACATTCATCCCTT+AGG | - | chr5_2:14169161-14169180 | None:intergenic | 30.0% | |
!!! | GTCTATGTGTTTTTTCTAGA+AGG | - | chr5_2:14169323-14169342 | None:intergenic | 30.0% |
TAACAACTACTCTATTGCTA+TGG | - | chr5_2:14169474-14169493 | None:intergenic | 30.0% | |
ACCAAAGAGAAATAAAAAGC+GGG | - | chr5_2:14169502-14169521 | None:intergenic | 30.0% | |
CAACATATAATACCTGAAGT+AGG | - | chr5_2:14169610-14169629 | None:intergenic | 30.0% | |
TGTTGAATAAGTATGCATTG+CGG | + | chr5_2:14169625-14169644 | Msa0758790:intron | 30.0% | |
AGTATACAAAAGTGGAATAG+GGG | - | chr5_2:14169666-14169685 | None:intergenic | 30.0% | |
AAAACAAATGCAAAGCTGTA+AGG | + | chr5_2:14169800-14169819 | Msa0758790:CDS | 30.0% | |
ATCAAAAATCATTCAGCAGA+AGG | + | chr5_2:14169924-14169943 | Msa0758790:CDS | 30.0% | |
ATTAAACTCAACACCTAACA+AGG | - | chr5_2:14170010-14170029 | None:intergenic | 30.0% | |
! | AACTGTTTGAAGTTAACAGA+AGG | - | chr5_2:14170115-14170134 | None:intergenic | 30.0% |
GAAAGGAGATAAAGGTAAAT+TGG | + | chr5_2:14170234-14170253 | Msa0758790:CDS | 30.0% | |
TATATTTGGTCAAAATGCCA+TGG | + | chr5_2:14170476-14170495 | Msa0758790:intron | 30.0% | |
ATGAAGGGCAATAAAGAATA+AGG | + | chr5_2:14170594-14170613 | Msa0758790:intron | 30.0% | |
TGAAGGGCAATAAAGAATAA+GGG | + | chr5_2:14170595-14170614 | Msa0758790:intron | 30.0% | |
TCTATAAGACTCCATAAAGT+AGG | - | chr5_2:14170694-14170713 | None:intergenic | 30.0% | |
AAATATTCAGGAGATGCTTA+TGG | - | chr5_2:14170806-14170825 | None:intergenic | 30.0% | |
TCTGAATGATTTATATCCAC+AGG | - | chr5_2:14171021-14171040 | None:intergenic | 30.0% | |
GTGGATATAAATCATTCAGA+AGG | + | chr5_2:14171021-14171040 | Msa0758790:three_prime_UTR | 30.0% | |
TATAAATCATTCAGAAGGGA+AGG | + | chr5_2:14171026-14171045 | Msa0758790:three_prime_UTR | 30.0% | |
ATAAATCATTCAGAAGGGAA+GGG | + | chr5_2:14171027-14171046 | Msa0758790:three_prime_UTR | 30.0% | |
TAAACCCGGATAATTATTTC+CGG | - | chr5_2:14171076-14171095 | None:intergenic | 30.0% | |
ATAATGCTCTTGTATAAACC+CGG | - | chr5_2:14171090-14171109 | None:intergenic | 30.0% | |
TTATTAATCATCCACACCAA+CGG | + | chr5_2:14171106-14171125 | Msa0758790:three_prime_UTR | 30.0% | |
TATACACAGCTAGTAAGATA+CGG | - | chr5_2:14171136-14171155 | None:intergenic | 30.0% | |
ATCTTTCCTTCAATTATCAG+AGG | + | chr5_2:14171205-14171224 | Msa0758790:three_prime_UTR | 30.0% | |
TCTTTCCTTCAATTATCAGA+GGG | + | chr5_2:14171206-14171225 | Msa0758790:three_prime_UTR | 30.0% | |
ATTCACGTCCTCTAATTCTA+CGG | + | chr5_2:14161747-14161766 | Msa0758790:CDS | 35.0% | |
ATTAGAGTGTGACCTTGTTA+TGG | - | chr5_2:14161783-14161802 | None:intergenic | 35.0% | |
! | TTTTTACACTTACCGGAAGT+TGG | - | chr5_2:14162001-14162020 | None:intergenic | 35.0% |
!!! | TTTTTTCAAAGCACGATGTG+TGG | + | chr5_2:14162095-14162114 | Msa0758790:intron | 35.0% |
GCCATAAGTATTTGGATGTA+AGG | + | chr5_2:14162198-14162217 | Msa0758790:intron | 35.0% | |
!!! | GGGATTTGAGTTGAATTTTG+AGG | + | chr5_2:14162424-14162443 | Msa0758790:intron | 35.0% |
CTTGTAATCTTCATTAGTCC+TGG | + | chr5_2:14162452-14162471 | Msa0758790:intron | 35.0% | |
GAAAATCAGAGAAGTAGACA+CGG | - | chr5_2:14162553-14162572 | None:intergenic | 35.0% | |
ATCTTGTTACAACTCTTCCT+AGG | + | chr5_2:14162582-14162601 | Msa0758790:intron | 35.0% | |
TAATCTATTCCATTCTCCGA+AGG | + | chr5_2:14162614-14162633 | Msa0758790:intron | 35.0% | |
AGAGAATCTAAATCTGCCTT+CGG | - | chr5_2:14162633-14162652 | None:intergenic | 35.0% | |
! | TTAATGGTGGGGATTGAAAA+TGG | - | chr5_2:14162681-14162700 | None:intergenic | 35.0% |
ACTTTCTCTCTCATGTTTGA+TGG | + | chr5_2:14162737-14162756 | Msa0758790:intron | 35.0% | |
! | TTCTCTCAAGTTTTCTCAAG+CGG | - | chr5_2:14162771-14162790 | None:intergenic | 35.0% |
TGTTCTTTCAGAACTGTTAG+CGG | + | chr5_2:14162951-14162970 | Msa0758790:intron | 35.0% | |
! | TCAATTTTATCTGCATCCCT+TGG | - | chr5_2:14163170-14163189 | None:intergenic | 35.0% |
GGATGCAGATAAAATTGACA+TGG | + | chr5_2:14163172-14163191 | Msa0758790:CDS | 35.0% | |
CAAGTCAACAATATCTTACC+GGG | - | chr5_2:14163260-14163279 | None:intergenic | 35.0% | |
CCAAGTCAACAATATCTTAC+CGG | - | chr5_2:14163261-14163280 | None:intergenic | 35.0% | |
! | ATGCACAATTTTCTACCACT+TGG | + | chr5_2:14163482-14163501 | Msa0758790:intron | 35.0% |
! | TGCACAATTTTCTACCACTT+GGG | + | chr5_2:14163483-14163502 | Msa0758790:intron | 35.0% |
GACGTATTAAAAGCTGAAGA+GGG | + | chr5_2:14163730-14163749 | Msa0758790:CDS | 35.0% | |
TGGGTACGTACAAATTACAA+TGG | + | chr5_2:14163762-14163781 | Msa0758790:intron | 35.0% | |
TTTAAATGGCACTAGGATGT+GGG | - | chr5_2:14163841-14163860 | None:intergenic | 35.0% | |
ATTTAAATGGCACTAGGATG+TGG | - | chr5_2:14163842-14163861 | None:intergenic | 35.0% | |
! | CATGTGTGAAGACGTTTTTA+TGG | + | chr5_2:14164163-14164182 | Msa0758790:intron | 35.0% |
!!! | CAGTGGCTTTGTTATTTTGT+TGG | + | chr5_2:14164462-14164481 | Msa0758790:intron | 35.0% |
!!! | TGGCTTTGTTATTTTGTTGG+CGG | + | chr5_2:14164465-14164484 | Msa0758790:intron | 35.0% |
TATAGGTAGCGTTTGAATTG+TGG | + | chr5_2:14164859-14164878 | Msa0758790:intron | 35.0% | |
ATAGGTAGCGTTTGAATTGT+GGG | + | chr5_2:14164860-14164879 | Msa0758790:intron | 35.0% | |
!! | CGAAGGTTTTAATAGAGCTA+TGG | + | chr5_2:14165041-14165060 | Msa0758790:CDS | 35.0% |
! | TTTTGTTACTGTCAGCAAGT+TGG | + | chr5_2:14165207-14165226 | Msa0758790:intron | 35.0% |
! | GTTTCAAATTTGCTTGGTTC+AGG | + | chr5_2:14165301-14165320 | Msa0758790:CDS | 35.0% |
!!! | TCAGGGTAAGAGTTTTTTGT+TGG | + | chr5_2:14165319-14165338 | Msa0758790:intron | 35.0% |
! | ACGACATGCATCTTCTTTTA+TGG | + | chr5_2:14165539-14165558 | Msa0758790:intron | 35.0% |
! | TATGGTGCTGAATGTCTAAT+TGG | + | chr5_2:14165557-14165576 | Msa0758790:intron | 35.0% |
! | TCTATTTGAAAGCATGTCCT+TGG | + | chr5_2:14165592-14165611 | Msa0758790:intron | 35.0% |
GCAAATTTGGAAAGATCAAG+TGG | - | chr5_2:14165701-14165720 | None:intergenic | 35.0% | |
ATCTTTCCAAATTTGCCCTA+TGG | + | chr5_2:14165705-14165724 | Msa0758790:intron | 35.0% | |
GGGATAATAATGAGAACCAT+AGG | - | chr5_2:14165724-14165743 | None:intergenic | 35.0% | |
AAAAAAAAGGGAGTCCTTCA+TGG | + | chr5_2:14165817-14165836 | Msa0758790:intron | 35.0% | |
TCAATGGAAAAAGTAGGAAC+TGG | - | chr5_2:14165940-14165959 | None:intergenic | 35.0% | |
! | GTTAATACTGATGGTGATGT+TGG | + | chr5_2:14166043-14166062 | Msa0758790:CDS | 35.0% |
TAGCAACTTGATTGCATTTC+TGG | - | chr5_2:14166235-14166254 | None:intergenic | 35.0% | |
AGATGAGAGAGAAAGTTAAG+GGG | - | chr5_2:14166461-14166480 | None:intergenic | 35.0% | |
ACGTTGCTTATGATTTCCTT+TGG | - | chr5_2:14166632-14166651 | None:intergenic | 35.0% | |
AAAGGAAATCATAAGCAACG+TGG | + | chr5_2:14166631-14166650 | Msa0758790:intron | 35.0% | |
ACACTAAACTAACAAGAGTG+CGG | - | chr5_2:14166677-14166696 | None:intergenic | 35.0% | |
TTTGCATAGACTTTCGATGT+TGG | + | chr5_2:14166720-14166739 | Msa0758790:intron | 35.0% | |
GAACTTGAAATGAAGCATGT+TGG | - | chr5_2:14166758-14166777 | None:intergenic | 35.0% | |
AAGTAGATAAGTAGGGAAAG+AGG | - | chr5_2:14166949-14166968 | None:intergenic | 35.0% | |
GAAGAACAATAGATCCTTTC+TGG | - | chr5_2:14167211-14167230 | None:intergenic | 35.0% | |
ATTGGATGTAAATGCAAAGG+AGG | + | chr5_2:14167401-14167420 | Msa0758790:CDS | 35.0% | |
TTGGATGTAAATGCAAAGGA+GGG | + | chr5_2:14167402-14167421 | Msa0758790:CDS | 35.0% | |
CCTCTAGATGAGACAAAAAA+AGG | - | chr5_2:14167502-14167521 | None:intergenic | 35.0% | |
!!! | CCTTTTTTTGTCTCATCTAG+AGG | + | chr5_2:14167499-14167518 | Msa0758790:intron | 35.0% |
AATGTAGGTTTATCCTGATC+CGG | + | chr5_2:14167547-14167566 | Msa0758790:intron | 35.0% | |
!! | GATAACCATTTTTCGTTCTC+AGG | - | chr5_2:14167620-14167639 | None:intergenic | 35.0% |
ATTTCATCTGAATTGTGTGG+CGG | + | chr5_2:14167641-14167660 | Msa0758790:CDS | 35.0% | |
ACATATTTCAAACACACGAG+AGG | + | chr5_2:14167747-14167766 | Msa0758790:CDS | 35.0% | |
TTGTGACAGCTGTTATTCTA+CGG | - | chr5_2:14167819-14167838 | None:intergenic | 35.0% | |
CAAACCAACTAGAACTAGAA+TGG | - | chr5_2:14167986-14168005 | None:intergenic | 35.0% | |
!! | CATTCTAGTTCTAGTTGGTT+TGG | + | chr5_2:14167984-14168003 | Msa0758790:intron | 35.0% |
TGGTTCACAGTTAATGAAGA+TGG | + | chr5_2:14168042-14168061 | Msa0758790:intron | 35.0% | |
AGGTTCAGGCAGTTAATAAT+GGG | - | chr5_2:14168074-14168093 | None:intergenic | 35.0% | |
! | TATAGCACTTATACCCCTTT+TGG | + | chr5_2:14168147-14168166 | Msa0758790:intron | 35.0% |
! | ATAGCACTTATACCCCTTTT+GGG | + | chr5_2:14168148-14168167 | Msa0758790:intron | 35.0% |
AAAACACATGTTATAGCACG+GGG | + | chr5_2:14168188-14168207 | Msa0758790:intron | 35.0% | |
! | AGTTTAAAACTCGAGAGCTT+TGG | + | chr5_2:14168327-14168346 | Msa0758790:intron | 35.0% |
TTAAAAATGCTTCCCCATCA+AGG | + | chr5_2:14168380-14168399 | Msa0758790:intron | 35.0% | |
AAAAAAGAGGCAGTTATTGG+AGG | - | chr5_2:14168419-14168438 | None:intergenic | 35.0% | |
CCTAATACTCCCCATTAAAA+TGG | - | chr5_2:14168455-14168474 | None:intergenic | 35.0% | |
!!! | CCATTTTAATGGGGAGTATT+AGG | + | chr5_2:14168452-14168471 | Msa0758790:intron | 35.0% |
! | GAGCATCATGTACATTCTTT+TGG | + | chr5_2:14168667-14168686 | Msa0758790:intron | 35.0% |
GAATCTCTACACTAGACAAT+TGG | + | chr5_2:14168689-14168708 | Msa0758790:intron | 35.0% | |
!! | AAAGGCATCGATGGTTTATA+TGG | + | chr5_2:14168848-14168867 | Msa0758790:intron | 35.0% |
GATGGTTTATATGGCCATAA+TGG | + | chr5_2:14168857-14168876 | Msa0758790:intron | 35.0% | |
! | AATGATGATGATGTCTGTTC+TGG | - | chr5_2:14169049-14169068 | None:intergenic | 35.0% |
! | CAGGAACTTATTAGTTTGGA+AGG | + | chr5_2:14169094-14169113 | Msa0758790:intron | 35.0% |
TTCAAAACTAGGATGACCTA+AGG | + | chr5_2:14169142-14169161 | Msa0758790:intron | 35.0% | |
TCAAAACTAGGATGACCTAA+GGG | + | chr5_2:14169143-14169162 | Msa0758790:intron | 35.0% | |
TCAAGAGACTGCTTATATAG+AGG | + | chr5_2:14169195-14169214 | Msa0758790:intron | 35.0% | |
CAAGAGACTGCTTATATAGA+GGG | + | chr5_2:14169196-14169215 | Msa0758790:intron | 35.0% | |
CAACAGATAAACATGTTGCA+AGG | - | chr5_2:14169407-14169426 | None:intergenic | 35.0% | |
CTTGCAACATGTTTATCTGT+TGG | + | chr5_2:14169405-14169424 | Msa0758790:intron | 35.0% | |
! | TTGCTTTCTGTCTATTTCTC+TGG | + | chr5_2:14169432-14169451 | Msa0758790:intron | 35.0% |
! | TGCTTTCTGTCTATTTCTCT+GGG | + | chr5_2:14169433-14169452 | Msa0758790:intron | 35.0% |
TGCTAAGAAAGCTGAAATCA+AGG | + | chr5_2:14169574-14169593 | Msa0758790:CDS | 35.0% | |
GTTGAATAAGTATGCATTGC+GGG | + | chr5_2:14169626-14169645 | Msa0758790:intron | 35.0% | |
TGTAAGGATTACAGCTGAAA+AGG | + | chr5_2:14169816-14169835 | Msa0758790:CDS | 35.0% | |
TGCATTTCTCATGTTGATGT+TGG | + | chr5_2:14169871-14169890 | Msa0758790:CDS | 35.0% | |
TTGTATTGGATGACCTTGTT+AGG | + | chr5_2:14169994-14170013 | Msa0758790:intron | 35.0% | |
GTAAATTGGATGTATCAGAG+TGG | + | chr5_2:14170248-14170267 | Msa0758790:CDS | 35.0% | |
TCTTATAGACATTGCTTAGC+TGG | + | chr5_2:14170705-14170724 | Msa0758790:intron | 35.0% | |
TTTGTTTGTCTAGCTGTGTT+TGG | + | chr5_2:14170861-14170880 | Msa0758790:intron | 35.0% | |
CAATGATGTATATTCTCCTG+TGG | + | chr5_2:14171002-14171021 | Msa0758790:three_prime_UTR | 35.0% | |
TTGAAGTAATCTGTTAACGC+CGG | + | chr5_2:14171054-14171073 | Msa0758790:three_prime_UTR | 35.0% | |
TAACGCCGGAAATAATTATC+CGG | + | chr5_2:14171068-14171087 | Msa0758790:three_prime_UTR | 35.0% | |
ATACACAGCTAGTAAGATAC+GGG | - | chr5_2:14171135-14171154 | None:intergenic | 35.0% | |
AAAGATGAATAGGACAGACA+AGG | - | chr5_2:14171191-14171210 | None:intergenic | 35.0% | |
! | TTTTGCCCTCTGATAATTGA+AGG | - | chr5_2:14171214-14171233 | None:intergenic | 35.0% |
CGCAAAATGATCTATCATGA+AGG | - | chr5_2:14171344-14171363 | None:intergenic | 35.0% | |
! | AACCAAAGTGTTCCAACTTC+CGG | + | chr5_2:14161986-14162005 | Msa0758790:CDS | 40.0% |
AAGCACGATGTGTGGTTTAA+AGG | + | chr5_2:14162103-14162122 | Msa0758790:intron | 40.0% | |
AGCACGATGTGTGGTTTAAA+GGG | + | chr5_2:14162104-14162123 | Msa0758790:intron | 40.0% | |
GTGTGGTTTAAAGGGGAATT+TGG | + | chr5_2:14162112-14162131 | Msa0758790:CDS | 40.0% | |
TGGTTTAAAGGGGAATTTGG+AGG | + | chr5_2:14162115-14162134 | Msa0758790:CDS | 40.0% | |
TCTAGCTGGCCATAAGTATT+TGG | + | chr5_2:14162190-14162209 | Msa0758790:CDS | 40.0% | |
CCTGCAATACCCTATTTACT+CGG | - | chr5_2:14162398-14162417 | None:intergenic | 40.0% | |
!! | GTAAATAGGGTATTGCAGGT+TGG | + | chr5_2:14162399-14162418 | Msa0758790:intron | 40.0% |
ATGAGCATAAGCTGTGAAAC+GGG | - | chr5_2:14162486-14162505 | None:intergenic | 40.0% | |
CATGAGCATAAGCTGTGAAA+CGG | - | chr5_2:14162487-14162506 | None:intergenic | 40.0% | |
GTTGCCTGTAAATGTGTTAC+AGG | - | chr5_2:14163116-14163135 | None:intergenic | 40.0% | |
GTAACACATTTACAGGCAAC+TGG | + | chr5_2:14163116-14163135 | Msa0758790:intron | 40.0% | |
! | TGTCATTTGCCATTGCTGAT+GGG | + | chr5_2:14163228-14163247 | Msa0758790:CDS | 40.0% |
! | CCGGTAAGATATTGTTGACT+TGG | + | chr5_2:14163258-14163277 | Msa0758790:intron | 40.0% |
TTATTGACAAGGTTTCCCTC+TGG | + | chr5_2:14163286-14163305 | Msa0758790:intron | 40.0% | |
TATTGACAAGGTTTCCCTCT+GGG | + | chr5_2:14163287-14163306 | Msa0758790:intron | 40.0% | |
! | GAAATTTTCAGATCCCCAGA+GGG | - | chr5_2:14163304-14163323 | None:intergenic | 40.0% |
! | TGAAATTTTCAGATCCCCAG+AGG | - | chr5_2:14163305-14163324 | None:intergenic | 40.0% |
ATGCCTTCCTCAAGAAATGA+GGG | - | chr5_2:14163361-14163380 | None:intergenic | 40.0% | |
AGACAATGTTGTAGCCCTTT+GGG | + | chr5_2:14163390-14163409 | Msa0758790:intron | 40.0% | |
GGTATTTCAATGATAGGGAG+AGG | + | chr5_2:14163605-14163624 | Msa0758790:intron | 40.0% | |
! | AAGGTCGTGAGTATGTTTTG+AGG | + | chr5_2:14163674-14163693 | Msa0758790:CDS | 40.0% |
CGACGTATTAAAAGCTGAAG+AGG | + | chr5_2:14163729-14163748 | Msa0758790:CDS | 40.0% | |
!!! | CTGAAGAGGGTTTTTTCAGT+GGG | + | chr5_2:14163743-14163762 | Msa0758790:CDS | 40.0% |
! | AATCAGGCTTGTAAGTGTTG+TGG | + | chr5_2:14164025-14164044 | Msa0758790:intron | 40.0% |
CATTAGGCATGTGATTCAAG+AGG | + | chr5_2:14164097-14164116 | Msa0758790:CDS | 40.0% | |
TTTCGGCAGAACCTTAGTTA+AGG | + | chr5_2:14164130-14164149 | Msa0758790:CDS | 40.0% | |
GTCTATCCTCACCTTAACTA+AGG | - | chr5_2:14164144-14164163 | None:intergenic | 40.0% | |
AAACCTGTCTTTACTTCTCC+AGG | + | chr5_2:14164242-14164261 | Msa0758790:intron | 40.0% | |
AACCTGTCTTTACTTCTCCA+GGG | + | chr5_2:14164243-14164262 | Msa0758790:intron | 40.0% | |
TCTTAAATTTCGCAATGCCC+TGG | - | chr5_2:14164263-14164282 | None:intergenic | 40.0% | |
! | TGCGAAATTTAAGACAGCTG+TGG | + | chr5_2:14164269-14164288 | Msa0758790:CDS | 40.0% |
!! | CAACTACAAGTTGATGTCGA+AGG | + | chr5_2:14165024-14165043 | Msa0758790:CDS | 40.0% |
AGATACCAAGGGGATAAGAA+TGG | + | chr5_2:14165373-14165392 | Msa0758790:intron | 40.0% | |
AACAACCATTCTTATCCCCT+TGG | - | chr5_2:14165381-14165400 | None:intergenic | 40.0% | |
TGGGATAAAATCCATGTCCA+AGG | - | chr5_2:14165612-14165631 | None:intergenic | 40.0% | |
TGAGAACCATAGGGCAAATT+TGG | - | chr5_2:14165714-14165733 | None:intergenic | 40.0% | |
! | ACTGCCCTTAGTAAGGTTTT+AGG | - | chr5_2:14165751-14165770 | None:intergenic | 40.0% |
AAAAGTGACTGCCCTTAGTA+AGG | - | chr5_2:14165758-14165777 | None:intergenic | 40.0% | |
CATGGTCCTAAGACAAGAAA+TGG | - | chr5_2:14165976-14165995 | None:intergenic | 40.0% | |
!! | TTGCTTTTACCACACTCTCA+TGG | - | chr5_2:14165994-14166013 | None:intergenic | 40.0% |
! | TGGTGATGTTGGTGTAATTC+TGG | + | chr5_2:14166054-14166073 | Msa0758790:CDS | 40.0% |
! | TTGATTGCATTTCTGGACGA+AGG | - | chr5_2:14166228-14166247 | None:intergenic | 40.0% |
ATGAGAGAGAAAGTTAAGGG+GGG | - | chr5_2:14166459-14166478 | None:intergenic | 40.0% | |
GATGAGAGAGAAAGTTAAGG+GGG | - | chr5_2:14166460-14166479 | None:intergenic | 40.0% | |
TCCTTTGGCAAAATCCAACA+GGG | - | chr5_2:14166617-14166636 | None:intergenic | 40.0% | |
TTCCTTTGGCAAAATCCAAC+AGG | - | chr5_2:14166618-14166637 | None:intergenic | 40.0% | |
TTCGTGCTTCACATTGGTAA+TGG | + | chr5_2:14166801-14166820 | Msa0758790:CDS | 40.0% | |
! | TCGTGCTTCACATTGGTAAT+GGG | + | chr5_2:14166802-14166821 | Msa0758790:CDS | 40.0% |
TGGCAACAAAGTAGTATGCA+AGG | + | chr5_2:14166839-14166858 | Msa0758790:CDS | 40.0% | |
GGGGGCAATATACAATCAAA+GGG | - | chr5_2:14166908-14166927 | None:intergenic | 40.0% | |
AGGGGGCAATATACAATCAA+AGG | - | chr5_2:14166909-14166928 | None:intergenic | 40.0% | |
TGTATGGTTAGCGGCTATAA+GGG | - | chr5_2:14167046-14167065 | None:intergenic | 40.0% | |
ATGTATGGTTAGCGGCTATA+AGG | - | chr5_2:14167047-14167066 | None:intergenic | 40.0% | |
GTAACATGTGTGTGCATGTA+TGG | - | chr5_2:14167062-14167081 | None:intergenic | 40.0% | |
ATTCCATTCACTGATCTGCA+TGG | + | chr5_2:14167131-14167150 | Msa0758790:intron | 40.0% | |
TTACCATGCAGATCAGTGAA+TGG | - | chr5_2:14167137-14167156 | None:intergenic | 40.0% | |
!! | TGATGAATGCAGGAAGTACT+TGG | + | chr5_2:14167173-14167192 | Msa0758790:intron | 40.0% |
GGCAAACATGTATACCAGAA+AGG | + | chr5_2:14167194-14167213 | Msa0758790:CDS | 40.0% | |
CTTAAGGAATCAGCATCAAC+AGG | - | chr5_2:14167342-14167361 | None:intergenic | 40.0% | |
TGGATGTAAATGCAAAGGAG+GGG | + | chr5_2:14167403-14167422 | Msa0758790:CDS | 40.0% | |
!! | AGCTTTTGCACTTTTAGCTG+AGG | + | chr5_2:14167774-14167793 | Msa0758790:CDS | 40.0% |
!! | TTTTGCACTTTTAGCTGAGG+AGG | + | chr5_2:14167777-14167796 | Msa0758790:CDS | 40.0% |
!! | TTTGCACTTTTAGCTGAGGA+GGG | + | chr5_2:14167778-14167797 | Msa0758790:CDS | 40.0% |
CAGGTTCAGGCAGTTAATAA+TGG | - | chr5_2:14168075-14168094 | None:intergenic | 40.0% | |
! | TTAAAACTCGAGAGCTTTGG+AGG | + | chr5_2:14168330-14168349 | Msa0758790:intron | 40.0% |
!! | TAAAACTCGAGAGCTTTGGA+GGG | + | chr5_2:14168331-14168350 | Msa0758790:intron | 40.0% |
GGAGATGAAAGCTCTTGTAA+AGG | - | chr5_2:14168613-14168632 | None:intergenic | 40.0% | |
AGTACAACTTCTCTCCACTT+TGG | + | chr5_2:14168636-14168655 | Msa0758790:intron | 40.0% | |
!! | ATGCTCTAGAAGTTCCAAAG+TGG | - | chr5_2:14168653-14168672 | None:intergenic | 40.0% |
GCTACAGGATCATCTATATC+AGG | + | chr5_2:14168806-14168825 | Msa0758790:intron | 40.0% | |
CGATTAGGTCACCTTAGTTT+GGG | - | chr5_2:14169020-14169039 | None:intergenic | 40.0% | |
ACGATTAGGTCACCTTAGTT+TGG | - | chr5_2:14169021-14169040 | None:intergenic | 40.0% | |
CTGTTCTGGCATTTACGATT+AGG | - | chr5_2:14169035-14169054 | None:intergenic | 40.0% | |
TTGGAAGGTAGTTGTGATTC+AGG | + | chr5_2:14169109-14169128 | Msa0758790:intron | 40.0% | |
AGTGCTAAATCCATCTCCAA+CGG | - | chr5_2:14169381-14169400 | None:intergenic | 40.0% | |
!!! | GCCCGCTTTTTATTTCTCTT+TGG | + | chr5_2:14169498-14169517 | Msa0758790:intron | 40.0% |
ATTTCAGCTTTCTTAGCAGC+AGG | - | chr5_2:14169572-14169591 | None:intergenic | 40.0% | |
GCTGATCTAGCTGTTAAAGA+TGG | + | chr5_2:14169838-14169857 | Msa0758790:CDS | 40.0% | |
AAGGTCATCCAATACAATGC+TGG | - | chr5_2:14169991-14170010 | None:intergenic | 40.0% | |
AAGGACACGAGACAAATTCA+AGG | - | chr5_2:14170081-14170100 | None:intergenic | 40.0% | |
TTGAATTTGTCTCGTGTCCT+TGG | + | chr5_2:14170080-14170099 | Msa0758790:intron | 40.0% | |
ACAGAAGGCAAAAATTGCCA+AGG | - | chr5_2:14170100-14170119 | None:intergenic | 40.0% | |
TAAACAGGGGTTATCAGTGA+TGG | + | chr5_2:14170156-14170175 | Msa0758790:CDS | 40.0% | |
!!! | AGTGATGGTTTTTAGCACTG+AGG | + | chr5_2:14170171-14170190 | Msa0758790:CDS | 40.0% |
CACTGAGGAATCTACAAACA+AGG | + | chr5_2:14170186-14170205 | Msa0758790:CDS | 40.0% | |
! | AACAAGGTTGTAGTTTGTGC+TGG | + | chr5_2:14170202-14170221 | Msa0758790:CDS | 40.0% |
! | ACAAGGTTGTAGTTTGTGCT+GGG | + | chr5_2:14170203-14170222 | Msa0758790:CDS | 40.0% |
AGATGTGGTAAAGGAAAAGG+AGG | + | chr5_2:14170301-14170320 | Msa0758790:CDS | 40.0% | |
! | AGGAAAAGGAGGTCTTGTAA+CGG | + | chr5_2:14170312-14170331 | Msa0758790:CDS | 40.0% |
AGAATAAGGGAACTTCGTGT+TGG | + | chr5_2:14170608-14170627 | Msa0758790:intron | 40.0% | |
TTTCACGGTCACCTACTTTA+TGG | + | chr5_2:14170680-14170699 | Msa0758790:intron | 40.0% | |
! | CTTTTGCACGAAAGTCTTCA+GGG | + | chr5_2:14170742-14170761 | Msa0758790:intron | 40.0% |
! | TGTATGAACCACCCATTTTC+AGG | + | chr5_2:14170903-14170922 | Msa0758790:intron | 40.0% |
! | GTATGAACCACCCATTTTCA+GGG | + | chr5_2:14170904-14170923 | Msa0758790:intron | 40.0% |
TGCATCAGTACCCTGAAAAT+GGG | - | chr5_2:14170917-14170936 | None:intergenic | 40.0% | |
ATGCATCAGTACCCTGAAAA+TGG | - | chr5_2:14170918-14170937 | None:intergenic | 40.0% | |
TGATGCATCACGCATAAATG+AGG | + | chr5_2:14170930-14170949 | Msa0758790:CDS | 40.0% | |
ATCACGCATAAATGAGGCTA+TGG | + | chr5_2:14170936-14170955 | Msa0758790:CDS | 40.0% | |
! | GCATCAACAAGTCGATTTCT+CGG | - | chr5_2:14170983-14171002 | None:intergenic | 40.0% |
AACGCCGGAAATAATTATCC+GGG | + | chr5_2:14171069-14171088 | Msa0758790:three_prime_UTR | 40.0% | |
!! | TAGCACTTTACGTTGGCTTT+GGG | - | chr5_2:14171260-14171279 | None:intergenic | 40.0% |
AGGACGTGAATGAAAGCAAG+CGG | - | chr5_2:14161738-14161757 | None:intergenic | 45.0% | |
GTGTTCTGCCGTAGAATTAG+AGG | - | chr5_2:14161758-14161777 | None:intergenic | 45.0% | |
TACCGGAAGTTGGAACACTT+TGG | - | chr5_2:14161991-14162010 | None:intergenic | 45.0% | |
GCACGATGTGTGGTTTAAAG+GGG | + | chr5_2:14162105-14162124 | Msa0758790:intron | 45.0% | |
GGGAATTTGGAGGAAGTTGT+TGG | + | chr5_2:14162125-14162144 | Msa0758790:CDS | 45.0% | |
!! | CCGAGTAAATAGGGTATTGC+AGG | + | chr5_2:14162395-14162414 | Msa0758790:intron | 45.0% |
TGAGCATAAGCTGTGAAACG+GGG | - | chr5_2:14162485-14162504 | None:intergenic | 45.0% | |
CGTTTCACAGCTTATGCTCA+TGG | + | chr5_2:14162485-14162504 | Msa0758790:intron | 45.0% | |
ACCTACAGGAAGCTACACAT+TGG | - | chr5_2:14162514-14162533 | None:intergenic | 45.0% | |
CTAAATCTGCCTTCGGAGAA+TGG | - | chr5_2:14162626-14162645 | None:intergenic | 45.0% | |
!! | TATTTTGGGAAGGCAGCCTT+CGG | - | chr5_2:14162821-14162840 | None:intergenic | 45.0% |
AGGAGTTGTCCAAACTCCAA+AGG | - | chr5_2:14162853-14162872 | None:intergenic | 45.0% | |
ATTTACAGGCAACTGGTGCT+CGG | + | chr5_2:14163123-14163142 | Msa0758790:intron | 45.0% | |
! | CTGTCATTTGCCATTGCTGA+TGG | + | chr5_2:14163227-14163246 | Msa0758790:CDS | 45.0% |
ATTGACAAGGTTTCCCTCTG+GGG | + | chr5_2:14163288-14163307 | Msa0758790:intron | 45.0% | |
CCTCAAGAAATGAGGGGAAA+AGG | - | chr5_2:14163354-14163373 | None:intergenic | 45.0% | |
! | CCTTTTCCCCTCATTTCTTG+AGG | + | chr5_2:14163351-14163370 | Msa0758790:intron | 45.0% |
TTCCCCTCATTTCTTGAGGA+AGG | + | chr5_2:14163355-14163374 | Msa0758790:intron | 45.0% | |
TGCCTTCCTCAAGAAATGAG+GGG | - | chr5_2:14163360-14163379 | None:intergenic | 45.0% | |
GATGCCTTCCTCAAGAAATG+AGG | - | chr5_2:14163362-14163381 | None:intergenic | 45.0% | |
CAGACAATGTTGTAGCCCTT+TGG | + | chr5_2:14163389-14163408 | Msa0758790:intron | 45.0% | |
GACAATGTTGTAGCCCTTTG+GGG | + | chr5_2:14163391-14163410 | Msa0758790:intron | 45.0% | |
!!! | GCTGAAGAGGGTTTTTTCAG+TGG | + | chr5_2:14163742-14163761 | Msa0758790:CDS | 45.0% |
GGAATCGCTAATCAGATGAC+TGG | - | chr5_2:14163942-14163961 | None:intergenic | 45.0% | |
GTCATCTGATTAGCGATTCC+AGG | + | chr5_2:14163942-14163961 | Msa0758790:intron | 45.0% | |
! | AAGTGTTGTGGCAAATGTGC+TGG | + | chr5_2:14164037-14164056 | Msa0758790:CDS | 45.0% |
AGTGTTGTGGCAAATGTGCT+GGG | + | chr5_2:14164038-14164057 | Msa0758790:CDS | 45.0% | |
!!! | TCTTGCTGCTGTTTTAGCTC+GGG | - | chr5_2:14164074-14164093 | None:intergenic | 45.0% |
!!! | CTCTTGCTGCTGTTTTAGCT+CGG | - | chr5_2:14164075-14164094 | None:intergenic | 45.0% |
! | AACAGCAGCAAGAGCACATT+AGG | + | chr5_2:14164081-14164100 | Msa0758790:CDS | 45.0% |
TAGGCATGTGATTCAAGAGG+AGG | + | chr5_2:14164100-14164119 | Msa0758790:CDS | 45.0% | |
CAAGAGGAGGAGGAAAGTTT+CGG | + | chr5_2:14164113-14164132 | Msa0758790:CDS | 45.0% | |
GCAGAACCTTAGTTAAGGTG+AGG | + | chr5_2:14164135-14164154 | Msa0758790:intron | 45.0% | |
ACAGCTGTGGAACATGTTCA+GGG | + | chr5_2:14164282-14164301 | Msa0758790:CDS | 45.0% | |
TCAATCTCACTAGGTCAGCA+TGG | + | chr5_2:14164584-14164603 | Msa0758790:intron | 45.0% | |
CTACCTGTGTGAGATCTAAC+GGG | - | chr5_2:14164899-14164918 | None:intergenic | 45.0% | |
CCTACCTGTGTGAGATCTAA+CGG | - | chr5_2:14164900-14164919 | None:intergenic | 45.0% | |
! | TGTTACTGTCAGCAAGTTGG+TGG | + | chr5_2:14165210-14165229 | Msa0758790:intron | 45.0% |
!! | AGTTGGTGGTGCTATTGTCA+TGG | + | chr5_2:14165224-14165243 | Msa0758790:CDS | 45.0% |
! | TGAAAGCATGTCCTTGGACA+TGG | + | chr5_2:14165598-14165617 | Msa0758790:intron | 45.0% |
! | ATTGGTTGAAGTGGAGTGCT+GGG | - | chr5_2:14165631-14165650 | None:intergenic | 45.0% |
CTCCACTTCAACCAATGACT+CGG | + | chr5_2:14165635-14165654 | Msa0758790:intron | 45.0% | |
TCCACTTCAACCAATGACTC+GGG | + | chr5_2:14165636-14165655 | Msa0758790:intron | 45.0% | |
ACAAGCTTCTATGCTGAGCA+AGG | + | chr5_2:14166082-14166101 | Msa0758790:CDS | 45.0% | |
! | ACCCTGTTGGATTTTGCCAA+AGG | + | chr5_2:14166613-14166632 | Msa0758790:intron | 45.0% |
!! | CTTCACATTGGTAATGGGAC+TGG | + | chr5_2:14166807-14166826 | Msa0758790:CDS | 45.0% |
! | AATGGGACTGGTATCTCTGT+TGG | + | chr5_2:14166819-14166838 | Msa0758790:CDS | 45.0% |
GTGTGTGCATGTATGGTTAG+CGG | - | chr5_2:14167055-14167074 | None:intergenic | 45.0% | |
TTCACTATGCTGCAATGAGC+AGG | + | chr5_2:14167312-14167331 | Msa0758790:intron | 45.0% | |
CTGACCCTGAGAACGAAAAA+TGG | + | chr5_2:14167612-14167631 | Msa0758790:CDS | 45.0% | |
TGAGCAGCAAGTAGATGAAG+CGG | + | chr5_2:14167879-14167898 | Msa0758790:CDS | 45.0% | |
TAAGCTGGAAGGAAGTTTGC+TGG | + | chr5_2:14167903-14167922 | Msa0758790:CDS | 45.0% | |
TCCATCACTTGAGCCTTTGA+AGG | + | chr5_2:14168012-14168031 | Msa0758790:intron | 45.0% | |
ACCTTCAAAGGCTCAAGTGA+TGG | - | chr5_2:14168016-14168035 | None:intergenic | 45.0% | |
!! | CACTTATACCCCTTTTGGGT+GGG | + | chr5_2:14168152-14168171 | Msa0758790:intron | 45.0% |
AGGTACTATCCCACCCAAAA+GGG | - | chr5_2:14168164-14168183 | None:intergenic | 45.0% | |
TAGGTACTATCCCACCCAAA+AGG | - | chr5_2:14168165-14168184 | None:intergenic | 45.0% | |
AAATGCTTCCCCATCAAGGA+AGG | + | chr5_2:14168384-14168403 | Msa0758790:intron | 45.0% | |
TGGAAAGAGCCTTCCTTGAT+GGG | - | chr5_2:14168396-14168415 | None:intergenic | 45.0% | |
AAAGAGGCAGTTATTGGAGG+TGG | - | chr5_2:14168416-14168435 | None:intergenic | 45.0% | |
GTGGAGAGAAGTTGTACTTG+AGG | - | chr5_2:14168634-14168653 | None:intergenic | 45.0% | |
CTCTACACTAGACAATTGGG+AGG | + | chr5_2:14168693-14168712 | Msa0758790:intron | 45.0% | |
ACTAGACAATTGGGAGGTGA+AGG | + | chr5_2:14168699-14168718 | Msa0758790:intron | 45.0% | |
TGCTAAATCCATCTCCAACG+GGG | - | chr5_2:14169379-14169398 | None:intergenic | 45.0% | |
GTGCTAAATCCATCTCCAAC+GGG | - | chr5_2:14169380-14169399 | None:intergenic | 45.0% | |
AGCTGAAATCAAGGCCAAGA+TGG | + | chr5_2:14169583-14169602 | Msa0758790:CDS | 45.0% | |
TTCTCATGTTGATGTTGGCC+TGG | + | chr5_2:14169876-14169895 | Msa0758790:CDS | 45.0% | |
CGGTGTTTCCAGCATTGTAT+TGG | + | chr5_2:14169980-14169999 | Msa0758790:intron | 45.0% | |
! | CAAGGTTGTAGTTTGTGCTG+GGG | + | chr5_2:14170204-14170223 | Msa0758790:CDS | 45.0% |
GTGTCGGAGAAAGGAGATAA+AGG | + | chr5_2:14170226-14170245 | Msa0758790:CDS | 45.0% | |
AGAGTGGCTGAGTAATGCTT+TGG | + | chr5_2:14170264-14170283 | Msa0758790:CDS | 45.0% | |
GAGTGGCTGAGTAATGCTTT+GGG | + | chr5_2:14170265-14170284 | Msa0758790:CDS | 45.0% | |
AGTGGCTGAGTAATGCTTTG+GGG | + | chr5_2:14170266-14170285 | Msa0758790:CDS | 45.0% | |
!! | AATGCTTTGGGGTCACTGAA+AGG | + | chr5_2:14170277-14170296 | Msa0758790:CDS | 45.0% |
!! | ATGCTTTGGGGTCACTGAAA+GGG | + | chr5_2:14170278-14170297 | Msa0758790:CDS | 45.0% |
CTGAAAGGGAGATGTGGTAA+AGG | + | chr5_2:14170292-14170311 | Msa0758790:CDS | 45.0% | |
GGGAGATGTGGTAAAGGAAA+AGG | + | chr5_2:14170298-14170317 | Msa0758790:CDS | 45.0% | |
! | GGAAAAGGAGGTCTTGTAAC+GGG | + | chr5_2:14170313-14170332 | Msa0758790:CDS | 45.0% |
! | GCTTTTGCACGAAAGTCTTC+AGG | + | chr5_2:14170741-14170760 | Msa0758790:intron | 45.0% |
ATCAGTACCCTGAAAATGGG+TGG | - | chr5_2:14170914-14170933 | None:intergenic | 45.0% | |
AGTAAGATACGGGTATCCGT+TGG | - | chr5_2:14171125-14171144 | None:intergenic | 45.0% | |
!! | CTAGCACTTTACGTTGGCTT+TGG | - | chr5_2:14171261-14171280 | None:intergenic | 45.0% |
! | GTGTCACTAGCACTTTACGT+TGG | - | chr5_2:14171267-14171286 | None:intergenic | 45.0% |
!!! | TATGTAATTTTTAAATTTAT+TGG | + | chr5_2:14162311-14162330 | Msa0758790:intron | 5.0% |
!!! | TTTTTTAATATAAAAATTCA+AGG | - | chr5_2:14170574-14170593 | None:intergenic | 5.0% |
!!! | TTTTTATATTAAAAAAATGA+AGG | + | chr5_2:14170578-14170597 | Msa0758790:intron | 5.0% |
!!! | TTTTATATTAAAAAAATGAA+GGG | + | chr5_2:14170579-14170598 | Msa0758790:intron | 5.0% |
ACGTGAATGAAAGCAAGCGG+CGG | - | chr5_2:14161735-14161754 | None:intergenic | 50.0% | |
GGCAGAACACGACCATAACA+AGG | + | chr5_2:14161768-14161787 | Msa0758790:CDS | 50.0% | |
!! | ATAGGGTATTGCAGGTTGGC+TGG | + | chr5_2:14162403-14162422 | Msa0758790:intron | 50.0% |
!! | TAGGGTATTGCAGGTTGGCT+GGG | + | chr5_2:14162404-14162423 | Msa0758790:intron | 50.0% |
GCCAATGTGTAGCTTCCTGT+AGG | + | chr5_2:14162510-14162529 | Msa0758790:intron | 50.0% | |
GAGAATCCAAATCCCTCCGA+AGG | + | chr5_2:14162802-14162821 | Msa0758790:intron | 50.0% | |
! | CGGCCATATTCTGGGAAAGT+CGG | + | chr5_2:14163143-14163162 | Msa0758790:CDS | 50.0% |
GGTCCGACTTTCCCAGAATA+TGG | - | chr5_2:14163149-14163168 | None:intergenic | 50.0% | |
! | ATTCTGGGAAAGTCGGACCA+AGG | + | chr5_2:14163150-14163169 | Msa0758790:CDS | 50.0% |
! | TTCTGGGAAAGTCGGACCAA+GGG | + | chr5_2:14163151-14163170 | Msa0758790:CDS | 50.0% |
CATGGCATACAGGGTTGTTG+CGG | + | chr5_2:14163190-14163209 | Msa0758790:CDS | 50.0% | |
CCATTGTGCATCTCCCCAAA+GGG | - | chr5_2:14163407-14163426 | None:intergenic | 50.0% | |
TCCATTGTGCATCTCCCCAA+AGG | - | chr5_2:14163408-14163427 | None:intergenic | 50.0% | |
!!! | CTTGCTGCTGTTTTAGCTCG+GGG | - | chr5_2:14164073-14164092 | None:intergenic | 50.0% |
GCATGTGATTCAAGAGGAGG+AGG | + | chr5_2:14164103-14164122 | Msa0758790:CDS | 50.0% | |
TGCCCTGGAGAAGTAAAGAC+AGG | - | chr5_2:14164248-14164267 | None:intergenic | 50.0% | |
GACAGCTGTGGAACATGTTC+AGG | + | chr5_2:14164281-14164300 | Msa0758790:CDS | 50.0% | |
CAGCTGTGGAACATGTTCAG+GGG | + | chr5_2:14164283-14164302 | Msa0758790:CDS | 50.0% | |
GTTCCCGTTAGATCTCACAC+AGG | + | chr5_2:14164893-14164912 | Msa0758790:CDS | 50.0% | |
CCGTTAGATCTCACACAGGT+AGG | + | chr5_2:14164897-14164916 | Msa0758790:intron | 50.0% | |
! | CATTGGTTGAAGTGGAGTGC+TGG | - | chr5_2:14165632-14165651 | None:intergenic | 50.0% |
! | ACCCGAGTCATTGGTTGAAG+TGG | - | chr5_2:14165640-14165659 | None:intergenic | 50.0% |
GTCTTAGGACCATGAGAGTG+TGG | + | chr5_2:14165982-14166001 | Msa0758790:intron | 50.0% | |
AGCTTCTATGCTGAGCAAGG+TGG | + | chr5_2:14166085-14166104 | Msa0758790:CDS | 50.0% | |
GAGCAAGGTGGTCAGGTATT+CGG | + | chr5_2:14166097-14166116 | Msa0758790:intron | 50.0% | |
TGGCTGCACTCTTGTTAACG+TGG | + | chr5_2:14166651-14166670 | Msa0758790:intron | 50.0% | |
GGAGGTTTCGTGCTTCACAT+TGG | + | chr5_2:14166795-14166814 | Msa0758790:CDS | 50.0% | |
ACCCTTGATACGCATGGCTT+CGG | - | chr5_2:14167436-14167455 | None:intergenic | 50.0% | |
CCAACTGACACAACTCTAGC+CGG | - | chr5_2:14167569-14167588 | None:intergenic | 50.0% | |
TTTCGTTCTCAGGGTCAGCA+AGG | - | chr5_2:14167610-14167629 | None:intergenic | 50.0% | |
GCTGAGGAGGGAATTGCTAA+AGG | + | chr5_2:14167790-14167809 | Msa0758790:CDS | 50.0% | |
AGTAGATGAAGCGGCTAAGC+TGG | + | chr5_2:14167888-14167907 | Msa0758790:CDS | 50.0% | |
!! | GGAAGGAAGTTTGCTGGATG+AGG | + | chr5_2:14167909-14167928 | Msa0758790:CDS | 50.0% |
!! | GGAAGTTTGCTGGATGAGGT+TGG | + | chr5_2:14167913-14167932 | Msa0758790:intron | 50.0% |
! | CACTTGAGCCTTTGAAGGTC+TGG | + | chr5_2:14168017-14168036 | Msa0758790:intron | 50.0% |
GAACCAAGCCAGACCTTCAA+AGG | - | chr5_2:14168028-14168047 | None:intergenic | 50.0% | |
! | GCACTTATACCCCTTTTGGG+TGG | + | chr5_2:14168151-14168170 | Msa0758790:intron | 50.0% |
GGTACTATCCCACCCAAAAG+GGG | - | chr5_2:14168163-14168182 | None:intergenic | 50.0% | |
GGAAAGAGCCTTCCTTGATG+GGG | - | chr5_2:14168395-14168414 | None:intergenic | 50.0% | |
GTGGAAAGAGCCTTCCTTGA+TGG | - | chr5_2:14168397-14168416 | None:intergenic | 50.0% | |
GCTAAATCCATCTCCAACGG+GGG | - | chr5_2:14169378-14169397 | None:intergenic | 50.0% | |
TACCTGAAGTAGGGCCATCT+TGG | - | chr5_2:14169600-14169619 | None:intergenic | 50.0% | |
GGATCTCATGCGTGAGCAAA+TGG | - | chr5_2:14169711-14169730 | None:intergenic | 50.0% | |
! | TGTAGTTTGTGCTGGGGTGT+CGG | + | chr5_2:14170210-14170229 | Msa0758790:CDS | 50.0% |
! | ACACGCACTGGCACTGAAGT+TGG | - | chr5_2:14162155-14162174 | None:intergenic | 55.0% |
GCTCACGAGCTTCTTCTAGC+TGG | + | chr5_2:14162176-14162195 | Msa0758790:CDS | 55.0% | |
ACTGGTGCTCGGCCATATTC+TGG | + | chr5_2:14163134-14163153 | Msa0758790:CDS | 55.0% | |
CTGGTGCTCGGCCATATTCT+GGG | + | chr5_2:14163135-14163154 | Msa0758790:CDS | 55.0% | |
GGGTTGTTGCGGATCACATC+AGG | + | chr5_2:14163201-14163220 | Msa0758790:CDS | 55.0% | |
! | ATTGCTGATGGGTCTCGTCC+CGG | + | chr5_2:14163239-14163258 | Msa0758790:CDS | 55.0% |
! | CCCTTTGGGGAGATGCACAA+TGG | + | chr5_2:14163404-14163423 | Msa0758790:intron | 55.0% |
GTCCATAGCGAACAGCTCGA+CGG | - | chr5_2:14163708-14163727 | None:intergenic | 55.0% | |
TGGCACTAGGATGTGGGACA+TGG | - | chr5_2:14163835-14163854 | None:intergenic | 55.0% | |
GTTCAGGGGAACGTACTGAG+CGG | + | chr5_2:14164297-14164316 | Msa0758790:CDS | 55.0% | |
TTCAGGGGAACGTACTGAGC+GGG | + | chr5_2:14164298-14164317 | Msa0758790:CDS | 55.0% | |
CTATGCTGAGCAAGGTGGTC+AGG | + | chr5_2:14166090-14166109 | Msa0758790:CDS | 55.0% | |
TGCCGAAGCCATGCGTATCA+AGG | + | chr5_2:14167431-14167450 | Msa0758790:CDS | 55.0% | |
GCCGAAGCCATGCGTATCAA+GGG | + | chr5_2:14167432-14167451 | Msa0758790:CDS | 55.0% | |
CCATGCGTATCAAGGGTCTG+CGG | + | chr5_2:14167439-14167458 | Msa0758790:CDS | 55.0% | |
! | AAGGGTCTGCGGACTGTTTC+TGG | + | chr5_2:14167450-14167469 | Msa0758790:CDS | 55.0% |
GACACAACTCTAGCCGGATC+AGG | - | chr5_2:14167563-14167582 | None:intergenic | 55.0% | |
CCGGCTAGAGTTGTGTCAGT+TGG | + | chr5_2:14167566-14167585 | Msa0758790:CDS | 55.0% | |
GATGAAGCGGCTAAGCTGGA+AGG | + | chr5_2:14167892-14167911 | Msa0758790:CDS | 55.0% | |
! | GAGCCTTTGAAGGTCTGGCT+TGG | + | chr5_2:14168022-14168041 | Msa0758790:intron | 55.0% |
TAACTGCCTGAACCTGCTGC+TGG | + | chr5_2:14168079-14168098 | Msa0758790:intron | 55.0% | |
! | GTTTTGCCAGCAGCAGGTTC+AGG | - | chr5_2:14168088-14168107 | None:intergenic | 55.0% |
!!! | GATGTCGTTTTGCCAGCAGC+AGG | - | chr5_2:14168094-14168113 | None:intergenic | 55.0% |
CACGAACTGCTGCAACATCC+AGG | - | chr5_2:14169897-14169916 | None:intergenic | 55.0% | |
GGATGTTGCAGCAGTTCGTG+AGG | + | chr5_2:14169897-14169916 | Msa0758790:CDS | 55.0% | |
GGGTCACTGAAAGGGAGATG+TGG | + | chr5_2:14170286-14170305 | Msa0758790:CDS | 55.0% | |
!! | AGGAGGTCTTGTAACGGGTC+AGG | + | chr5_2:14170318-14170337 | Msa0758790:CDS | 55.0% |
GATACGGGTATCCGTTGGTG+TGG | - | chr5_2:14171120-14171139 | None:intergenic | 55.0% | |
GCAAGCGGCGGAGACATCAA+AGG | - | chr5_2:14161723-14161742 | None:intergenic | 60.0% | |
AGCTCGTGAGCTACACGCAC+TGG | - | chr5_2:14162167-14162186 | None:intergenic | 60.0% | |
!! | GTGAAACGGGGAGCATCACC+AGG | - | chr5_2:14162473-14162492 | None:intergenic | 60.0% |
AGGCAGCCTTCGGAGGGATT+TGG | - | chr5_2:14162811-14162830 | None:intergenic | 60.0% | |
TTGGGAAGGCAGCCTTCGGA+GGG | - | chr5_2:14162817-14162836 | None:intergenic | 60.0% | |
TTTGGGAAGGCAGCCTTCGG+AGG | - | chr5_2:14162818-14162837 | None:intergenic | 60.0% | |
GGGACGAGACCCATCAGCAA+TGG | - | chr5_2:14163240-14163259 | None:intergenic | 60.0% | |
CTCCGTCGAGCTGTTCGCTA+TGG | + | chr5_2:14163703-14163722 | Msa0758790:CDS | 60.0% | |
TCAGGGGAACGTACTGAGCG+GGG | + | chr5_2:14164299-14164318 | Msa0758790:CDS | 60.0% | |
CCGCAGACCCTTGATACGCA+TGG | - | chr5_2:14167442-14167461 | None:intergenic | 60.0% | |
GCAATAAGCAGCTCCCCCGT+TGG | + | chr5_2:14169362-14169381 | Msa0758790:intron | 60.0% | |
GGCCAAGATGGCCCTACTTC+AGG | + | chr5_2:14169595-14169614 | Msa0758790:CDS | 60.0% | |
!! | TGTGCTGGGGTGTCGGAGAA+AGG | + | chr5_2:14170217-14170236 | Msa0758790:CDS | 60.0% |
AGCAGCTCCCCCGTTGGAGA+TGG | + | chr5_2:14169368-14169387 | Msa0758790:intron | 65.0% | |
GGGGAACGTACTGAGCGGGG+AGG | + | chr5_2:14164302-14164321 | Msa0758790:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 14161698 | 14171363 | 14161698 | ID=Msa0758790;Name=Msa0758790 |
chr5_2 | mRNA | 14161698 | 14171363 | 14161698 | ID=Msa0758790-mRNA-1;Parent=Msa0758790;Name=Msa0758790-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.75|0.76|1|0.9|0.90|21|364|794 |
chr5_2 | exon | 14161698 | 14161789 | 14161698 | ID=Msa0758790-mRNA-1:exon:6340;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14161930 | 14162007 | 14161930 | ID=Msa0758790-mRNA-1:exon:6341;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14162106 | 14162214 | 14162106 | ID=Msa0758790-mRNA-1:exon:6342;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14163131 | 14163260 | 14163131 | ID=Msa0758790-mRNA-1:exon:6343;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14163668 | 14163764 | 14163668 | ID=Msa0758790-mRNA-1:exon:6344;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14164031 | 14164151 | 14164031 | ID=Msa0758790-mRNA-1:exon:6345;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14164264 | 14164374 | 14164264 | ID=Msa0758790-mRNA-1:exon:6346;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14164864 | 14164914 | 14164864 | ID=Msa0758790-mRNA-1:exon:6347;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14165006 | 14165101 | 14165006 | ID=Msa0758790-mRNA-1:exon:6348;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14165222 | 14165323 | 14165222 | ID=Msa0758790-mRNA-1:exon:6349;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14165989 | 14166111 | 14165989 | ID=Msa0758790-mRNA-1:exon:6350;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14166729 | 14166860 | 14166729 | ID=Msa0758790-mRNA-1:exon:6351;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14167024 | 14167095 | 14167024 | ID=Msa0758790-mRNA-1:exon:6352;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14167185 | 14167260 | 14167185 | ID=Msa0758790-mRNA-1:exon:6353;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14167334 | 14167476 | 14167334 | ID=Msa0758790-mRNA-1:exon:6354;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14167554 | 14167662 | 14167554 | ID=Msa0758790-mRNA-1:exon:6355;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14167743 | 14167930 | 14167743 | ID=Msa0758790-mRNA-1:exon:6356;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14169527 | 14169616 | 14169527 | ID=Msa0758790-mRNA-1:exon:6357;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14169763 | 14169945 | 14169763 | ID=Msa0758790-mRNA-1:exon:6358;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14170133 | 14170339 | 14170133 | ID=Msa0758790-mRNA-1:exon:6359;Parent=Msa0758790-mRNA-1 |
chr5_2 | exon | 14170925 | 14171363 | 14170925 | ID=Msa0758790-mRNA-1:exon:6360;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14161698 | 14161789 | 14161698 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14161930 | 14162007 | 14161930 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14162106 | 14162214 | 14162106 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14163131 | 14163260 | 14163131 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14163668 | 14163764 | 14163668 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14164031 | 14164151 | 14164031 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14164264 | 14164374 | 14164264 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14164864 | 14164914 | 14164864 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14165006 | 14165101 | 14165006 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14165222 | 14165323 | 14165222 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14165989 | 14166111 | 14165989 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14166729 | 14166860 | 14166729 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14167024 | 14167095 | 14167024 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14167185 | 14167260 | 14167185 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14167334 | 14167476 | 14167334 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14167554 | 14167662 | 14167554 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14167743 | 14167930 | 14167743 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14169527 | 14169616 | 14169527 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14169763 | 14169945 | 14169763 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14170133 | 14170339 | 14170133 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | CDS | 14170925 | 14170999 | 14170925 | ID=Msa0758790-mRNA-1:cds;Parent=Msa0758790-mRNA-1 |
chr5_2 | three_prime_UTR | 14171000 | 14171363 | 14171000 | ID=Msa0758790-mRNA-1:three_prime_utr;Parent=Msa0758790-mRNA-1 |
Gene Sequence |
Protein sequence |