Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0760470 | G7K6S6 | 96.465 | 396 | 7 | 3 | 1 | 395 | 1 | 390 | 0.0 | 769 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0144300 | Msa0760470 | 0.942321 | 8.835772e-102 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0760470 | MtrunA17_Chr5g0409191 | 96.465 | 396 | 7 | 3 | 1 | 395 | 1 | 390 | 0.0 | 769 |
| Msa0760470 | MtrunA17_Chr3g0126961 | 33.663 | 202 | 108 | 3 | 209 | 384 | 595 | 796 | 2.03e-22 | 99.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0760470 | AT3G45900.1 | 53.865 | 401 | 140 | 9 | 9 | 395 | 20 | 389 | 1.41e-115 | 342 |
| Msa0760470 | AT5G53020.2 | 34.211 | 190 | 95 | 5 | 219 | 379 | 509 | 697 | 2.71e-20 | 93.6 |
| Msa0760470 | AT5G53020.3 | 34.211 | 190 | 95 | 5 | 219 | 379 | 518 | 706 | 2.84e-20 | 93.6 |
| Msa0760470 | AT5G53020.4 | 34.211 | 190 | 95 | 5 | 219 | 379 | 518 | 706 | 2.84e-20 | 93.6 |
| Msa0760470 | AT5G53020.5 | 34.211 | 190 | 95 | 5 | 219 | 379 | 518 | 706 | 2.84e-20 | 93.6 |
| Msa0760470 | AT5G53020.1 | 34.211 | 190 | 95 | 5 | 219 | 379 | 518 | 706 | 2.84e-20 | 93.6 |
| Msa0760470 | AT5G53020.8 | 34.211 | 190 | 95 | 5 | 219 | 379 | 518 | 706 | 2.84e-20 | 93.6 |
| Msa0760470 | AT5G53020.10 | 34.211 | 190 | 95 | 5 | 219 | 379 | 518 | 706 | 2.84e-20 | 93.6 |
| Msa0760470 | AT5G53020.9 | 34.211 | 190 | 95 | 5 | 219 | 379 | 518 | 706 | 2.84e-20 | 93.6 |
| Msa0760470 | AT5G53020.6 | 34.031 | 191 | 95 | 5 | 219 | 379 | 518 | 707 | 3.60e-20 | 93.2 |
| Msa0760470 | AT5G53020.7 | 34.031 | 191 | 95 | 5 | 219 | 379 | 518 | 707 | 3.60e-20 | 93.2 |
Find 112 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTGGTGGTTCTAAGTTC+TGG | 0.218734 | 5_2:+16969877 | Msa0760470:CDS |
| ACCTAACAAGTTAGCTCTTT+TGG | 0.227504 | 5_2:+16972813 | Msa0760470:three_prime_UTR |
| GTTTATTTCAAGAAGGTTTC+AGG | 0.228467 | 5_2:+16969716 | Msa0760470:CDS |
| TTCAAGTAGTTTAAGTTTAG+AGG | 0.228999 | 5_2:-16972080 | None:intergenic |
| CATACCACATTTGCTAATAT+TGG | 0.241224 | 5_2:+16972893 | Msa0760470:three_prime_UTR |
| CTCGAGATCGCCAATGATTC+TGG | 0.267321 | 5_2:-16972685 | None:intergenic |
| TCAGAATCAAATCCATTATT+AGG | 0.269450 | 5_2:-16969852 | None:intergenic |
| GAGGAGGGATTGGGTGGGTG+CGG | 0.272740 | 5_2:+16969741 | Msa0760470:CDS |
| TCTTCTTGTTCTGCCATTGA+TGG | 0.279112 | 5_2:-16969330 | None:intergenic |
| TGGCGATCTCGAGGGGATTC+TGG | 0.281079 | 5_2:+16972695 | Msa0760470:CDS |
| TTCTGGTGGTTCTAAGTTCT+GGG | 0.285384 | 5_2:+16969878 | Msa0760470:CDS |
| GTTTCAGGAGGAGGAGGGAT+TGG | 0.302065 | 5_2:+16969731 | Msa0760470:CDS |
| ACTAACGACAAGACGGTCTA+TGG | 0.315792 | 5_2:+16972608 | Msa0760470:CDS |
| AATCAGCATCTTCCTAATAA+TGG | 0.316032 | 5_2:+16969840 | Msa0760470:CDS |
| TAAGGCGCGTGTGGAGGATT+TGG | 0.323322 | 5_2:+16969659 | Msa0760470:CDS |
| CCTCCCTCAGTTCAGAATTT+CGG | 0.352653 | 5_2:+16972448 | Msa0760470:CDS |
| CGGGAGTAGGGAAGATATGG+TGG | 0.355026 | 5_2:+16969761 | Msa0760470:CDS |
| CAGGAGGAGGAGGGATTGGG+TGG | 0.359104 | 5_2:+16969735 | Msa0760470:CDS |
| TGGGTAGCTGGCTACGTCTT+TGG | 0.362738 | 5_2:-16969154 | None:intergenic |
| TGAATCACCATCTACCTTCC+AGG | 0.364048 | 5_2:-16972047 | None:intergenic |
| CTTTGCCTGCTTCTTTATTG+AGG | 0.375585 | 5_2:-16972158 | None:intergenic |
| GACAGTAGCTGTTTGTCGTT+TGG | 0.377834 | 5_2:-16969187 | None:intergenic |
| TTTCAGGAGGAGGAGGGATT+GGG | 0.380363 | 5_2:+16969732 | Msa0760470:CDS |
| CTCAGATTCTATTGAACAAA+AGG | 0.382171 | 5_2:-16972765 | None:intergenic |
| GGGCTGAGAAAGCTTCATTA+TGG | 0.384555 | 5_2:+16969898 | Msa0760470:CDS |
| CAGAGAATTACAGCGAAATC+TGG | 0.388856 | 5_2:+16972650 | Msa0760470:CDS |
| AGCGGTGGTGGAAGATTCTA+AGG | 0.392115 | 5_2:+16969641 | Msa0760470:CDS |
| GATTGGGTGGGTGCGGGAGT+AGG | 0.397006 | 5_2:+16969748 | Msa0760470:CDS |
| ATTGGGTGGGTGCGGGAGTA+GGG | 0.398786 | 5_2:+16969749 | Msa0760470:CDS |
| TTGCTTTGTAGTCTTCTTGT+CGG | 0.402931 | 5_2:-16969509 | None:intergenic |
| TTCAAGAAGGTTTCAGGAGG+AGG | 0.407039 | 5_2:+16969722 | Msa0760470:CDS |
| TAAACTTAAACTACTTGAAC+AGG | 0.409685 | 5_2:+16972084 | Msa0760470:CDS |
| ACCAAAAGAGCTAACTTGTT+AGG | 0.414869 | 5_2:-16972814 | None:intergenic |
| GTTGAGAGAGATGAGATGAT+TGG | 0.415833 | 5_2:+16969693 | Msa0760470:CDS |
| TGAGAGAGAAAGGAGTGAAA+GGG | 0.416394 | 5_2:-16969291 | None:intergenic |
| AGGAGGGATTGGGTGGGTGC+GGG | 0.417088 | 5_2:+16969742 | Msa0760470:CDS |
| TGAGTTAGAGAAACAGAAAT+GGG | 0.419090 | 5_2:-16969211 | None:intergenic |
| GGAAGCATTCCGGCTTCAAC+AGG | 0.422920 | 5_2:+16972497 | Msa0760470:CDS |
| TACAGCGAAATCTGGAGATA+TGG | 0.434552 | 5_2:+16972658 | Msa0760470:CDS |
| TTATTAACTCTGGATAAGAT+TGG | 0.439714 | 5_2:+16972109 | Msa0760470:CDS |
| TTGAGAGAGATGAGATGATT+GGG | 0.444007 | 5_2:+16969694 | Msa0760470:CDS |
| GTGCGGGAGTAGGGAAGATA+TGG | 0.447072 | 5_2:+16969758 | Msa0760470:CDS |
| TTGAGTTAGAGAAACAGAAA+TGG | 0.449162 | 5_2:-16969212 | None:intergenic |
| ATATGGTTGGCCAGAATCAT+TGG | 0.454079 | 5_2:+16972675 | Msa0760470:CDS |
| CGTGAGGTTGAGAGCGGTGG+TGG | 0.454457 | 5_2:+16969629 | Msa0760470:CDS |
| TGTGAGTGTGTGAGAGAGAA+AGG | 0.456349 | 5_2:-16969301 | None:intergenic |
| TCGTATTATACATTGATTCA+AGG | 0.456785 | 5_2:-16971907 | None:intergenic |
| GACGGTCTATGGACTCAATT+CGG | 0.457752 | 5_2:+16972619 | Msa0760470:CDS |
| GAGAGAGAAAGGAGTGAAAG+GGG | 0.459625 | 5_2:-16969290 | None:intergenic |
| TGAAACTGCACAGAAACTAA+TGG | 0.463437 | 5_2:+16972527 | Msa0760470:CDS |
| GTGAGAGAGAAAGGAGTGAA+AGG | 0.478887 | 5_2:-16969292 | None:intergenic |
| TGAGAAAGCTTCATTATGGC+AGG | 0.479549 | 5_2:+16969902 | Msa0760470:CDS |
| AAGAAGGTTTCAGGAGGAGG+AGG | 0.480080 | 5_2:+16969725 | Msa0760470:CDS |
| CTTTATTGAGGATGATACCT+TGG | 0.489617 | 5_2:-16972146 | None:intergenic |
| CGTATTATACATTGATTCAA+GGG | 0.493230 | 5_2:-16971906 | None:intergenic |
| ATCATCCTCAATAAAGAAGC+AGG | 0.495600 | 5_2:+16972153 | Msa0760470:CDS |
| GAATGTTGTCGAAGGTTTGT+TGG | 0.500287 | 5_2:-16969438 | None:intergenic |
| ATTGTTGAAGTACATAAAAG+TGG | 0.504064 | 5_2:+16972843 | Msa0760470:three_prime_UTR |
| TGAACAGGAATTATTAACTC+TGG | 0.504596 | 5_2:+16972099 | Msa0760470:CDS |
| CAGATGCATCCTGTTGAAGC+CGG | 0.507297 | 5_2:-16972506 | None:intergenic |
| ATTGAGGATGATACCTTGGA+CGG | 0.508080 | 5_2:-16972142 | None:intergenic |
| CAATAGAATCTGAGAATGCT+AGG | 0.509965 | 5_2:+16972774 | Msa0760470:exon |
| ATGGCATTGCATACTGAAGT+CGG | 0.513336 | 5_2:+16972546 | Msa0760470:CDS |
| AAGGTAGATGGTGATTCAGC+TGG | 0.514443 | 5_2:+16972052 | Msa0760470:CDS |
| GATGCCAATATTAGCAAATG+TGG | 0.528322 | 5_2:-16972897 | None:intergenic |
| CATTACAAGGATGAGTTAAG+AGG | 0.534473 | 5_2:+16972576 | Msa0760470:CDS |
| TGGCATTGCATACTGAAGTC+GGG | 0.534491 | 5_2:+16972547 | Msa0760470:CDS |
| ATCTCGAGGGGATTCTGGCA+AGG | 0.536858 | 5_2:+16972700 | Msa0760470:CDS |
| CTTGTTAGGTTGAGAAAGTG+AGG | 0.539882 | 5_2:-16972800 | None:intergenic |
| TGATTGGGTTTATTTCAAGA+AGG | 0.539944 | 5_2:+16969709 | Msa0760470:CDS |
| AAGCTCTTCTTCAGCACGAA+TGG | 0.545342 | 5_2:-16969469 | None:intergenic |
| GAATCACCATCTACCTTCCA+GGG | 0.547805 | 5_2:-16972046 | None:intergenic |
| ACTCACACTATCACCATCAA+TGG | 0.549741 | 5_2:+16969317 | Msa0760470:exon |
| AGGAGGAGGAGGGATTGGGT+GGG | 0.559031 | 5_2:+16969736 | Msa0760470:CDS |
| CCGAAATTCTGAACTGAGGG+AGG | 0.560591 | 5_2:-16972448 | None:intergenic |
| GAGGGGATTCTGGCAAGGGA+CGG | 0.560986 | 5_2:+16972705 | Msa0760470:CDS |
| AACTCTGGATAAGATTGGTA+AGG | 0.562737 | 5_2:+16972114 | Msa0760470:CDS |
| ACGAGGAGAAGCGTCTCTTA+CGG | 0.565016 | 5_2:+16969580 | Msa0760470:CDS |
| TGGTAAGGATGTTCCGTCCA+AGG | 0.566141 | 5_2:+16972129 | Msa0760470:CDS |
| AGAAGGTTTCAGGAGGAGGA+GGG | 0.566753 | 5_2:+16969726 | Msa0760470:CDS |
| CAGAATCATTGGCGATCTCG+AGG | 0.578159 | 5_2:+16972686 | Msa0760470:CDS |
| GGGAGTAGGGAAGATATGGT+GGG | 0.579206 | 5_2:+16969762 | Msa0760470:CDS |
| GGTCCGAAATTCTGAACTGA+GGG | 0.585159 | 5_2:-16972451 | None:intergenic |
| AGAGAGAAAGGAGTGAAAGG+GGG | 0.587521 | 5_2:-16969289 | None:intergenic |
| TCTGTGTGAAGCGAAGATCT+CGG | 0.591350 | 5_2:-16969544 | None:intergenic |
| TCTCGAGGGGATTCTGGCAA+GGG | 0.591487 | 5_2:+16972701 | Msa0760470:CDS |
| GCGAAATCTGGAGATATGGT+TGG | 0.592039 | 5_2:+16972662 | Msa0760470:CDS |
| AGAATCATTGGCGATCTCGA+GGG | 0.600514 | 5_2:+16972687 | Msa0760470:CDS |
| GGAAGATTCTAAGGCGCGTG+TGG | 0.601842 | 5_2:+16969650 | Msa0760470:CDS |
| ACGGCGAATCGACGCCGCGT+CGG | 0.603319 | 5_2:+16969599 | Msa0760470:CDS |
| GATCGTGAGGTTGAGAGCGG+TGG | 0.607480 | 5_2:+16969626 | Msa0760470:CDS |
| TCGCTTCACACAGAAACTCA+TGG | 0.608090 | 5_2:+16969553 | Msa0760470:CDS |
| AGATTCTAAGGCGCGTGTGG+AGG | 0.609014 | 5_2:+16969653 | Msa0760470:CDS |
| GCGAATCGACGCCGCGTCGG+AGG | 0.609329 | 5_2:+16969602 | Msa0760470:CDS |
| GGGTCCGAAATTCTGAACTG+AGG | 0.615960 | 5_2:-16972452 | None:intergenic |
| GAATCATTGGCGATCTCGAG+GGG | 0.617453 | 5_2:+16972688 | Msa0760470:CDS |
| TGCGTTGAGAATGTTGTCGA+AGG | 0.619261 | 5_2:-16969446 | None:intergenic |
| GAACTGAGGGAGGGTTCGCA+CGG | 0.623877 | 5_2:-16972438 | None:intergenic |
| AGTCGGGAAGACTCATTACA+AGG | 0.641833 | 5_2:+16972563 | Msa0760470:CDS |
| ATACGAAACAGTTTGTAGCA+AGG | 0.644445 | 5_2:+16971924 | Msa0760470:CDS |
| TATTTCAAGAAGGTTTCAGG+AGG | 0.645074 | 5_2:+16969719 | Msa0760470:CDS |
| TATGGTGGGGAGCACTGCTG+AGG | 0.648567 | 5_2:+16969776 | Msa0760470:CDS |
| CGAAATTCTGAACTGAGGGA+GGG | 0.655327 | 5_2:-16972447 | None:intergenic |
| CAGAAACTCATGGCGCGACG+AGG | 0.662194 | 5_2:+16969563 | Msa0760470:CDS |
| GGAGTAGGGAAGATATGGTG+GGG | 0.664501 | 5_2:+16969763 | Msa0760470:CDS |
| AAATCACACTAACGACAAGA+CGG | 0.664620 | 5_2:+16972601 | Msa0760470:CDS |
| TGTGGAGGATTTGGAGCGTG+AGG | 0.669922 | 5_2:+16969668 | Msa0760470:CDS |
| CCGCGTCGGAGGAGATCGTG+AGG | 0.675156 | 5_2:+16969613 | Msa0760470:CDS |
| AATCACCATCTACCTTCCAG+GGG | 0.698962 | 5_2:-16972045 | None:intergenic |
| GGAGATCGTGAGGTTGAGAG+CGG | 0.699635 | 5_2:+16969623 | Msa0760470:CDS |
| CCTCACGATCTCCTCCGACG+CGG | 0.747474 | 5_2:-16969613 | None:intergenic |
| ATCACCATCTACCTTCCAGG+GGG | 0.750416 | 5_2:-16972044 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATACATAAAAAAGTT+GGG | - | chr5_2:16970590-16970609 | None:intergenic | 15.0% |
| !! | AAAAATGAGTAGTTAAAATT+AGG | + | chr5_2:16971193-16971212 | Msa0760470:intron | 15.0% |
| !!! | AAGCTATTTTCTTCATATAT+AGG | + | chr5_2:16969384-16969403 | Msa0760470:CDS | 20.0% |
| !! | AAATCAAATCAAATCCAAAA+GGG | - | chr5_2:16969969-16969988 | None:intergenic | 20.0% |
| !! | TGAATATAATATGCTGATAA+TGG | + | chr5_2:16970148-16970167 | Msa0760470:intron | 20.0% |
| !! | TATAAACTATGTCTACTTAT+CGG | - | chr5_2:16970224-16970243 | None:intergenic | 20.0% |
| !! | CAACAAATACATAAAAAAGT+TGG | - | chr5_2:16970591-16970610 | None:intergenic | 20.0% |
| !!! | ACTTTTTTATGTATTTGTTG+TGG | + | chr5_2:16970591-16970610 | Msa0760470:intron | 20.0% |
| !! | AAAAACAGACAAATAACAAA+TGG | - | chr5_2:16970690-16970709 | None:intergenic | 20.0% |
| !!! | GTAATGCTATTTAAGATTTT+AGG | - | chr5_2:16971470-16971489 | None:intergenic | 20.0% |
| !! | AATATAAGCAAGTTTGTAAT+GGG | - | chr5_2:16972308-16972327 | None:intergenic | 20.0% |
| ! | TCAGAATCAAATCCATTATT+AGG | - | chr5_2:16969855-16969874 | None:intergenic | 25.0% |
| ! | CAAATCAAATCAAATCCAAA+AGG | - | chr5_2:16969970-16969989 | None:intergenic | 25.0% |
| !! | AGCTTTTTACTCAATTTTCA+AGG | + | chr5_2:16970519-16970538 | Msa0760470:intron | 25.0% |
| ! | ATGGTAAAAGGAATTAAACA+TGG | - | chr5_2:16970637-16970656 | None:intergenic | 25.0% |
| ! | AAATAACAAATGGATGTACA+TGG | - | chr5_2:16970680-16970699 | None:intergenic | 25.0% |
| ! | TTGCTAATATTGTTTGGTTA+GGG | + | chr5_2:16970866-16970885 | Msa0760470:intron | 25.0% |
| !! | TTACAGCTCTTTTGTATAAT+TGG | + | chr5_2:16971115-16971134 | Msa0760470:intron | 25.0% |
| !!! | TGTTGCTATTTATATTTGGT+AGG | - | chr5_2:16971366-16971385 | None:intergenic | 25.0% |
| !!! | TGCATGTTGCTATTTATATT+TGG | - | chr5_2:16971370-16971389 | None:intergenic | 25.0% |
| !! | TATGACATTGCACTTAATTT+TGG | + | chr5_2:16971422-16971441 | Msa0760470:intron | 25.0% |
| !! | TATAGTTTGCATTTCTGATA+GGG | - | chr5_2:16971761-16971780 | None:intergenic | 25.0% |
| !! | TTATAGTTTGCATTTCTGAT+AGG | - | chr5_2:16971762-16971781 | None:intergenic | 25.0% |
| ! | ATGCAAACTATAATGTTGTT+AGG | + | chr5_2:16971769-16971788 | Msa0760470:intron | 25.0% |
| ! | TGCAAACTATAATGTTGTTA+GGG | + | chr5_2:16971770-16971789 | Msa0760470:intron | 25.0% |
| ! | GTTTGTCTGTATAATTTACT+TGG | + | chr5_2:16971792-16971811 | Msa0760470:intron | 25.0% |
| !!! | CGTATTATACATTGATTCAA+GGG | - | chr5_2:16971909-16971928 | None:intergenic | 25.0% |
| !!! | TCGTATTATACATTGATTCA+AGG | - | chr5_2:16971910-16971929 | None:intergenic | 25.0% |
| ! | TTCATTTAGTTGGAGAATAA+TGG | - | chr5_2:16971994-16972013 | None:intergenic | 25.0% |
| ! | ATTATTCTCCAACTAAATGA+AGG | + | chr5_2:16971993-16972012 | Msa0760470:intron | 25.0% |
| ! | TTATTCTCCAACTAAATGAA+GGG | + | chr5_2:16971994-16972013 | Msa0760470:intron | 25.0% |
| !! | TTCAAGTAGTTTAAGTTTAG+AGG | - | chr5_2:16972083-16972102 | None:intergenic | 25.0% |
| ! | TAAACTTAAACTACTTGAAC+AGG | + | chr5_2:16972084-16972103 | Msa0760470:CDS | 25.0% |
| ! | TTATTAACTCTGGATAAGAT+TGG | + | chr5_2:16972109-16972128 | Msa0760470:CDS | 25.0% |
| ! | CAATATAAGCAAGTTTGTAA+TGG | - | chr5_2:16972309-16972328 | None:intergenic | 25.0% |
| ! | TTTATTATCTCACTTAAACC+TGG | + | chr5_2:16972338-16972357 | Msa0760470:intron | 25.0% |
| !! | TAAAAACTCTGTTTGAGTTT+GGG | - | chr5_2:16972475-16972494 | None:intergenic | 25.0% |
| ! | ATTGTTGAAGTACATAAAAG+TGG | + | chr5_2:16972843-16972862 | Msa0760470:three_prime_UTR | 25.0% |
| TGAGTTAGAGAAACAGAAAT+GGG | - | chr5_2:16969214-16969233 | None:intergenic | 30.0% | |
| TTGAGTTAGAGAAACAGAAA+TGG | - | chr5_2:16969215-16969234 | None:intergenic | 30.0% | |
| TGATTGGGTTTATTTCAAGA+AGG | + | chr5_2:16969709-16969728 | Msa0760470:CDS | 30.0% | |
| GTTTATTTCAAGAAGGTTTC+AGG | + | chr5_2:16969716-16969735 | Msa0760470:CDS | 30.0% | |
| AATCAGCATCTTCCTAATAA+TGG | + | chr5_2:16969840-16969859 | Msa0760470:CDS | 30.0% | |
| !! | TAATATGCTGATAATGGTGA+TGG | + | chr5_2:16970154-16970173 | Msa0760470:intron | 30.0% |
| TGAAAGTGATTGAATGCAAT+TGG | + | chr5_2:16970255-16970274 | Msa0760470:intron | 30.0% | |
| GAAAGTGATTGAATGCAATT+GGG | + | chr5_2:16970256-16970275 | Msa0760470:intron | 30.0% | |
| TTGAAGTGTATGTAGAAAGT+AGG | + | chr5_2:16970456-16970475 | Msa0760470:intron | 30.0% | |
| !! | TTTTCAAGGTAACTGACTTT+AGG | + | chr5_2:16970533-16970552 | Msa0760470:intron | 30.0% |
| CTATGAACTTGAATGGTAAA+AGG | - | chr5_2:16970649-16970668 | None:intergenic | 30.0% | |
| ! | TTTACCATTCAAGTTCATAG+TGG | + | chr5_2:16970649-16970668 | Msa0760470:intron | 30.0% |
| !! | TGCAACTTGCTAATATTGTT+TGG | + | chr5_2:16970860-16970879 | Msa0760470:intron | 30.0% |
| CTTGCTAATATTGTTTGGTT+AGG | + | chr5_2:16970865-16970884 | Msa0760470:intron | 30.0% | |
| TAATATTGTTTGGTTAGGGT+AGG | + | chr5_2:16970870-16970889 | Msa0760470:intron | 30.0% | |
| AATATTGTTTGGTTAGGGTA+GGG | + | chr5_2:16970871-16970890 | Msa0760470:intron | 30.0% | |
| !! | ACATGTTTTTGCTTCAATAG+TGG | + | chr5_2:16971014-16971033 | Msa0760470:intron | 30.0% |
| !! | TATAGTTGAAGGGTGTTAAA+TGG | - | chr5_2:16971404-16971423 | None:intergenic | 30.0% |
| TGCAATGTCATATAGTTGAA+GGG | - | chr5_2:16971414-16971433 | None:intergenic | 30.0% | |
| ! | ACATTGCACTTAATTTTGGA+AGG | + | chr5_2:16971426-16971445 | Msa0760470:intron | 30.0% |
| ! | TCTATAGTTTGCATTTCTGA+TGG | - | chr5_2:16971566-16971585 | None:intergenic | 30.0% |
| ATCAGAAATGCAAACTATAG+AGG | + | chr5_2:16971565-16971584 | Msa0760470:intron | 30.0% | |
| TCAGAAATGCAAACTATAGA+GGG | + | chr5_2:16971566-16971585 | Msa0760470:intron | 30.0% | |
| TGTCAATTAAAAGTTGAAGC+TGG | + | chr5_2:16971836-16971855 | Msa0760470:intron | 30.0% | |
| TTAAATGTTTATACGCTTGC+AGG | + | chr5_2:16971868-16971887 | Msa0760470:intron | 30.0% | |
| CAATTTACCCTTCATTTAGT+TGG | - | chr5_2:16972004-16972023 | None:intergenic | 30.0% | |
| !! | TAAATTGTTTTTCCCTCAGA+AGG | + | chr5_2:16972017-16972036 | Msa0760470:intron | 30.0% |
| !! | AAATTGTTTTTCCCTCAGAA+GGG | + | chr5_2:16972018-16972037 | Msa0760470:intron | 30.0% |
| TGAACAGGAATTATTAACTC+TGG | + | chr5_2:16972099-16972118 | Msa0760470:CDS | 30.0% | |
| ! | GTAAAAACTCTGTTTGAGTT+TGG | - | chr5_2:16972476-16972495 | None:intergenic | 30.0% |
| ! | AACTCAAACAGAGTTTTTAC+TGG | + | chr5_2:16972476-16972495 | Msa0760470:CDS | 30.0% |
| CTCAGATTCTATTGAACAAA+AGG | - | chr5_2:16972768-16972787 | None:intergenic | 30.0% | |
| ! | CATACCACATTTGCTAATAT+TGG | + | chr5_2:16972893-16972912 | Msa0760470:three_prime_UTR | 30.0% |
| TTGCTTTGTAGTCTTCTTGT+CGG | - | chr5_2:16969512-16969531 | None:intergenic | 35.0% | |
| TTGAGAGAGATGAGATGATT+GGG | + | chr5_2:16969694-16969713 | Msa0760470:CDS | 35.0% | |
| TATTTCAAGAAGGTTTCAGG+AGG | + | chr5_2:16969719-16969738 | Msa0760470:CDS | 35.0% | |
| ! | GGATTTGATTCTGAGTTTTC+TGG | + | chr5_2:16969861-16969880 | Msa0760470:CDS | 35.0% |
| ! | TTTGATTCTGAGTTTTCTGG+TGG | + | chr5_2:16969864-16969883 | Msa0760470:CDS | 35.0% |
| ! | ATTACCATGTGTTACCCTTT+TGG | + | chr5_2:16969952-16969971 | Msa0760470:intron | 35.0% |
| AAATCCAAAAGGGTAACACA+TGG | - | chr5_2:16969959-16969978 | None:intergenic | 35.0% | |
| !! | ACAGTAGAAAGTGTTAGTTG+AGG | + | chr5_2:16970025-16970044 | Msa0760470:intron | 35.0% |
| CGAACATGATACTGATATGT+AGG | + | chr5_2:16970332-16970351 | Msa0760470:intron | 35.0% | |
| TGTATGTAGAAAGTAGGTCA+GGG | + | chr5_2:16970462-16970481 | Msa0760470:intron | 35.0% | |
| AAATTGAGTAAAAAGCTGCG+TGG | - | chr5_2:16970516-16970535 | None:intergenic | 35.0% | |
| ! | ACTTTAGGAGATTCCTTTCT+TGG | + | chr5_2:16970548-16970567 | Msa0760470:intron | 35.0% |
| ! | CTTTAGGAGATTCCTTTCTT+GGG | + | chr5_2:16970549-16970568 | Msa0760470:intron | 35.0% |
| !! | TATGTATTTGTTGTGGCAAC+TGG | + | chr5_2:16970598-16970617 | Msa0760470:intron | 35.0% |
| !! | ATGTATTTGTTGTGGCAACT+GGG | + | chr5_2:16970599-16970618 | Msa0760470:intron | 35.0% |
| !!! | CTCTATTGTTTTTGCTTTGC+TGG | + | chr5_2:16970735-16970754 | Msa0760470:intron | 35.0% |
| ATGCCTGCTGAAAATTAAAG+TGG | - | chr5_2:16970762-16970781 | None:intergenic | 35.0% | |
| CATTAGTCACTGTTTGTATC+TGG | + | chr5_2:16970779-16970798 | Msa0760470:intron | 35.0% | |
| AGATAAAACTAATTACCCCC+TGG | - | chr5_2:16971093-16971112 | None:intergenic | 35.0% | |
| TTCTTTACTCCTTGTTCTCT+CGG | + | chr5_2:16971217-16971236 | Msa0760470:intron | 35.0% | |
| TTTGAATGTCCCTAGAAATG+TGG | + | chr5_2:16971240-16971259 | Msa0760470:intron | 35.0% | |
| CGAGTTTAACCACATTTCTA+GGG | - | chr5_2:16971252-16971271 | None:intergenic | 35.0% | |
| TCGAGTTTAACCACATTTCT+AGG | - | chr5_2:16971253-16971272 | None:intergenic | 35.0% | |
| GAAATTGTACGATCAGTCAT+AGG | + | chr5_2:16971271-16971290 | Msa0760470:intron | 35.0% | |
| CACTGTTTGTTTGTGAAAGA+TGG | + | chr5_2:16971325-16971344 | Msa0760470:intron | 35.0% | |
| GTGCAATGTCATATAGTTGA+AGG | - | chr5_2:16971415-16971434 | None:intergenic | 35.0% | |
| CAATGTAACATTCTGACCTA+AGG | + | chr5_2:16971507-16971526 | Msa0760470:intron | 35.0% | |
| ACAACCTCTTGTGTAAAAAC+AGG | + | chr5_2:16971655-16971674 | Msa0760470:intron | 35.0% | |
| CAACCTCTTGTGTAAAAACA+GGG | + | chr5_2:16971656-16971675 | Msa0760470:intron | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr5_2:16971662-16971681 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr5_2:16971661-16971680 | Msa0760470:intron | 35.0% | |
| ATACGAAACAGTTTGTAGCA+AGG | + | chr5_2:16971924-16971943 | Msa0760470:CDS | 35.0% | |
| AACTCTGGATAAGATTGGTA+AGG | + | chr5_2:16972114-16972133 | Msa0760470:CDS | 35.0% | |
| CTTTATTGAGGATGATACCT+TGG | - | chr5_2:16972149-16972168 | None:intergenic | 35.0% | |
| ATCATCCTCAATAAAGAAGC+AGG | + | chr5_2:16972153-16972172 | Msa0760470:CDS | 35.0% | |
| ! | TTGTAATGGGACCATTGTTT+CGG | - | chr5_2:16972295-16972314 | None:intergenic | 35.0% |
| ATCAGGCTCAAAACTACAAA+TGG | - | chr5_2:16972391-16972410 | None:intergenic | 35.0% | |
| TGTTCGAAAACAGAGAAATC+AGG | - | chr5_2:16972408-16972427 | None:intergenic | 35.0% | |
| ! | TGATTTCTCTGTTTTCGAAC+AGG | + | chr5_2:16972407-16972426 | Msa0760470:intron | 35.0% |
| !!! | AGTTTTTACTGGAAGCATTC+CGG | + | chr5_2:16972487-16972506 | Msa0760470:CDS | 35.0% |
| TGAAACTGCACAGAAACTAA+TGG | + | chr5_2:16972527-16972546 | Msa0760470:CDS | 35.0% | |
| CATTACAAGGATGAGTTAAG+AGG | + | chr5_2:16972576-16972595 | Msa0760470:CDS | 35.0% | |
| AAATCACACTAACGACAAGA+CGG | + | chr5_2:16972601-16972620 | Msa0760470:CDS | 35.0% | |
| CAATAGAATCTGAGAATGCT+AGG | + | chr5_2:16972774-16972793 | Msa0760470:exon | 35.0% | |
| !! | ACCTAACAAGTTAGCTCTTT+TGG | + | chr5_2:16972813-16972832 | Msa0760470:three_prime_UTR | 35.0% |
| !! | ACCAAAAGAGCTAACTTGTT+AGG | - | chr5_2:16972817-16972836 | None:intergenic | 35.0% |
| GATGCCAATATTAGCAAATG+TGG | - | chr5_2:16972900-16972919 | None:intergenic | 35.0% | |
| !!! | CTGTTTGTCGTTTGGTTTTG+TGG | - | chr5_2:16969182-16969201 | None:intergenic | 40.0% |
| !!! | GTGGGTGTGTGTTTCTTTTT+TGG | - | chr5_2:16969253-16969272 | None:intergenic | 40.0% |
| TGAGAGAGAAAGGAGTGAAA+GGG | - | chr5_2:16969294-16969313 | None:intergenic | 40.0% | |
| ACTCACACTATCACCATCAA+TGG | + | chr5_2:16969317-16969336 | Msa0760470:exon | 40.0% | |
| TCTTCTTGTTCTGCCATTGA+TGG | - | chr5_2:16969333-16969352 | None:intergenic | 40.0% | |
| GAATGTTGTCGAAGGTTTGT+TGG | - | chr5_2:16969441-16969460 | None:intergenic | 40.0% | |
| GTTGAGAGAGATGAGATGAT+TGG | + | chr5_2:16969693-16969712 | Msa0760470:CDS | 40.0% | |
| !! | TTTCTGGTGGTTCTAAGTTC+TGG | + | chr5_2:16969877-16969896 | Msa0760470:CDS | 40.0% |
| !! | TTCTGGTGGTTCTAAGTTCT+GGG | + | chr5_2:16969878-16969897 | Msa0760470:CDS | 40.0% |
| TGAGAAAGCTTCATTATGGC+AGG | + | chr5_2:16969902-16969921 | Msa0760470:CDS | 40.0% | |
| TCAGACACACCTTTGATTGA+AGG | + | chr5_2:16970293-16970312 | Msa0760470:intron | 40.0% | |
| ! | ACACCTTTGATTGAAGGTGT+TGG | + | chr5_2:16970299-16970318 | Msa0760470:intron | 40.0% |
| GTGTATGTAGAAAGTAGGTC+AGG | + | chr5_2:16970461-16970480 | Msa0760470:intron | 40.0% | |
| GTATGTAGAAAGTAGGTCAG+GGG | + | chr5_2:16970463-16970482 | Msa0760470:intron | 40.0% | |
| AATTCTACCGTACCCAAGAA+AGG | - | chr5_2:16970564-16970583 | None:intergenic | 40.0% | |
| TTTCTTGGGTACGGTAGAAT+TGG | + | chr5_2:16970563-16970582 | Msa0760470:intron | 40.0% | |
| !! | TGTATTTGTTGTGGCAACTG+GGG | + | chr5_2:16970600-16970619 | Msa0760470:intron | 40.0% |
| ! | ACCATTCAAGTTCATAGTGG+TGG | + | chr5_2:16970652-16970671 | Msa0760470:intron | 40.0% |
| TCCACCACTATGAACTTGAA+TGG | - | chr5_2:16970656-16970675 | None:intergenic | 40.0% | |
| GTACACATTGCTACAAGAGA+AGG | - | chr5_2:16970716-16970735 | None:intergenic | 40.0% | |
| !! | GGTCCACTTTAATTTTCAGC+AGG | + | chr5_2:16970756-16970775 | Msa0760470:intron | 40.0% |
| ! | TGTATCTGGTGCTGAAATCT+AGG | + | chr5_2:16970793-16970812 | Msa0760470:intron | 40.0% |
| ! | GTATCTGGTGCTGAAATCTA+GGG | + | chr5_2:16970794-16970813 | Msa0760470:intron | 40.0% |
| ! | AAATCTAGGGTATGCTTCTC+CGG | + | chr5_2:16970807-16970826 | Msa0760470:intron | 40.0% |
| GTTAGCAAACAGCAAGCAAA+AGG | - | chr5_2:16970925-16970944 | None:intergenic | 40.0% | |
| AGGAAAAACATGCAAGAGAC+CGG | - | chr5_2:16970949-16970968 | None:intergenic | 40.0% | |
| !! | TCCTGTTTGCTATACTGCAA+AGG | + | chr5_2:16970965-16970984 | Msa0760470:intron | 40.0% |
| !! | CCTGTTTGCTATACTGCAAA+GGG | + | chr5_2:16970966-16970985 | Msa0760470:intron | 40.0% |
| !! | AATTCAAAAAGCACCCACCA+GGG | + | chr5_2:16971073-16971092 | Msa0760470:intron | 40.0% |
| AAAACTAATTACCCCCTGGT+GGG | - | chr5_2:16971089-16971108 | None:intergenic | 40.0% | |
| TAAAACTAATTACCCCCTGG+TGG | - | chr5_2:16971090-16971109 | None:intergenic | 40.0% | |
| ! | ATTTTTCGCACTAGAGACTG+AGG | - | chr5_2:16971179-16971198 | None:intergenic | 40.0% |
| ACATTCAAACCGAGAGAACA+AGG | - | chr5_2:16971229-16971248 | None:intergenic | 40.0% | |
| CACAAACAAACAGTGCTGTA+GGG | - | chr5_2:16971320-16971339 | None:intergenic | 40.0% | |
| TCACAAACAAACAGTGCTGT+AGG | - | chr5_2:16971321-16971340 | None:intergenic | 40.0% | |
| !! | GAAGGGTGTTAAATGGAGTT+TGG | - | chr5_2:16971397-16971416 | None:intergenic | 40.0% |
| GTGTTGAGTCAAATGACCTT+AGG | - | chr5_2:16971526-16971545 | None:intergenic | 40.0% | |
| CAAACTATAGAGGGTAACCT+TGG | + | chr5_2:16971575-16971594 | Msa0760470:intron | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | + | chr5_2:16971611-16971630 | Msa0760470:intron | 40.0% | |
| ! | TTACACAAGAGGTTGTTTCC+AGG | - | chr5_2:16971651-16971670 | None:intergenic | 40.0% |
| CGTACAATACACCAAATGGT+GGG | + | chr5_2:16971687-16971706 | Msa0760470:intron | 40.0% | |
| ATTGAGGATGATACCTTGGA+CGG | - | chr5_2:16972145-16972164 | None:intergenic | 40.0% | |
| CTTTGCCTGCTTCTTTATTG+AGG | - | chr5_2:16972161-16972180 | None:intergenic | 40.0% | |
| ACTGTAGTTACCCGAAACAA+TGG | + | chr5_2:16972281-16972300 | Msa0760470:intron | 40.0% | |
| ! | TGTAATGGGACCATTGTTTC+GGG | - | chr5_2:16972294-16972313 | None:intergenic | 40.0% |
| AGGCTCAAAACTACAAATGG+TGG | - | chr5_2:16972388-16972407 | None:intergenic | 40.0% | |
| ATGGCATTGCATACTGAAGT+CGG | + | chr5_2:16972546-16972565 | Msa0760470:CDS | 40.0% | |
| CAGAGAATTACAGCGAAATC+TGG | + | chr5_2:16972650-16972669 | Msa0760470:CDS | 40.0% | |
| TACAGCGAAATCTGGAGATA+TGG | + | chr5_2:16972658-16972677 | Msa0760470:CDS | 40.0% | |
| ! | ATATGGTTGGCCAGAATCAT+TGG | + | chr5_2:16972675-16972694 | Msa0760470:CDS | 40.0% |
| !! | CTTGTTAGGTTGAGAAAGTG+AGG | - | chr5_2:16972803-16972822 | None:intergenic | 40.0% |
| !!! | GTCGTTTGGTTTTGTGGAGT+GGG | - | chr5_2:16969176-16969195 | None:intergenic | 45.0% |
| !!! | TGTCGTTTGGTTTTGTGGAG+TGG | - | chr5_2:16969177-16969196 | None:intergenic | 45.0% |
| GACAGTAGCTGTTTGTCGTT+TGG | - | chr5_2:16969190-16969209 | None:intergenic | 45.0% | |
| !!! | GGTTTTGGTTTCTGTGGTGT+GGG | - | chr5_2:16969271-16969290 | None:intergenic | 45.0% |
| !!! | AAAGGGGGTTTTGGTTTCTG+TGG | - | chr5_2:16969277-16969296 | None:intergenic | 45.0% |
| ! | AAAGGAGTGAAAGGGGGTTT+TGG | - | chr5_2:16969286-16969305 | None:intergenic | 45.0% |
| AGAGAGAAAGGAGTGAAAGG+GGG | - | chr5_2:16969292-16969311 | None:intergenic | 45.0% | |
| GAGAGAGAAAGGAGTGAAAG+GGG | - | chr5_2:16969293-16969312 | None:intergenic | 45.0% | |
| GTGAGAGAGAAAGGAGTGAA+AGG | - | chr5_2:16969295-16969314 | None:intergenic | 45.0% | |
| TGTGAGTGTGTGAGAGAGAA+AGG | - | chr5_2:16969304-16969323 | None:intergenic | 45.0% | |
| TGCGTTGAGAATGTTGTCGA+AGG | - | chr5_2:16969449-16969468 | None:intergenic | 45.0% | |
| AAGCTCTTCTTCAGCACGAA+TGG | - | chr5_2:16969472-16969491 | None:intergenic | 45.0% | |
| TCTGTGTGAAGCGAAGATCT+CGG | - | chr5_2:16969547-16969566 | None:intergenic | 45.0% | |
| TCGCTTCACACAGAAACTCA+TGG | + | chr5_2:16969553-16969572 | Msa0760470:CDS | 45.0% | |
| TTCAAGAAGGTTTCAGGAGG+AGG | + | chr5_2:16969722-16969741 | Msa0760470:CDS | 45.0% | |
| GGGCTGAGAAAGCTTCATTA+TGG | + | chr5_2:16969898-16969917 | Msa0760470:CDS | 45.0% | |
| CAAACACATGCTGTGAAGTC+CGG | + | chr5_2:16970177-16970196 | Msa0760470:intron | 45.0% | |
| GCACCAACACCTTCAATCAA+AGG | - | chr5_2:16970305-16970324 | None:intergenic | 45.0% | |
| ATGTGTCCGACACTAGACAT+TGG | + | chr5_2:16970404-16970423 | Msa0760470:intron | 45.0% | |
| AAGCTGCGTGGTAAAAGAAC+AGG | - | chr5_2:16970504-16970523 | None:intergenic | 45.0% | |
| GGAGATTCCTTTCTTGGGTA+CGG | + | chr5_2:16970554-16970573 | Msa0760470:intron | 45.0% | |
| GAATTAAACATGGCCTCCCA+AGG | - | chr5_2:16970627-16970646 | None:intergenic | 45.0% | |
| ! | AATCTAGGGTATGCTTCTCC+GGG | + | chr5_2:16970808-16970827 | Msa0760470:intron | 45.0% |
| !! | TGCTTGCTGTTTGCTAACAC+CGG | + | chr5_2:16970927-16970946 | Msa0760470:intron | 45.0% |
| CCCTTTGCAGTATAGCAAAC+AGG | - | chr5_2:16970969-16970988 | None:intergenic | 45.0% | |
| ! | TATACTGCAAAGGGCATGTG+TGG | + | chr5_2:16970975-16970994 | Msa0760470:intron | 45.0% |
| !! | CAATTCAAAAAGCACCCACC+AGG | + | chr5_2:16971072-16971091 | Msa0760470:intron | 45.0% |
| !! | ATTCAAAAAGCACCCACCAG+GGG | + | chr5_2:16971074-16971093 | Msa0760470:intron | 45.0% |
| !! | GTGCTGTAGGGAAAGTATCA+CGG | - | chr5_2:16971308-16971327 | None:intergenic | 45.0% |
| GTCATGTGACTGTAAGGTCA+CGG | + | chr5_2:16971617-16971636 | Msa0760470:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | + | chr5_2:16971618-16971637 | Msa0760470:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr5_2:16971683-16971702 | Msa0760470:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr5_2:16971686-16971705 | Msa0760470:intron | 45.0% | |
| AATCACCATCTACCTTCCAG+GGG | - | chr5_2:16972048-16972067 | None:intergenic | 45.0% | |
| GAATCACCATCTACCTTCCA+GGG | - | chr5_2:16972049-16972068 | None:intergenic | 45.0% | |
| TGAATCACCATCTACCTTCC+AGG | - | chr5_2:16972050-16972069 | None:intergenic | 45.0% | |
| AAGGTAGATGGTGATTCAGC+TGG | + | chr5_2:16972052-16972071 | Msa0760470:CDS | 45.0% | |
| ATGACAGGAAAAGATGTGCC+AGG | - | chr5_2:16972359-16972378 | None:intergenic | 45.0% | |
| ! | TGGCACATCTTTTCCTGTCA+TGG | + | chr5_2:16972358-16972377 | Msa0760470:intron | 45.0% |
| ! | GGCACATCTTTTCCTGTCAT+GGG | + | chr5_2:16972359-16972378 | Msa0760470:intron | 45.0% |
| CGAAATTCTGAACTGAGGGA+GGG | - | chr5_2:16972450-16972469 | None:intergenic | 45.0% | |
| CCTCCCTCAGTTCAGAATTT+CGG | + | chr5_2:16972448-16972467 | Msa0760470:CDS | 45.0% | |
| GGTCCGAAATTCTGAACTGA+GGG | - | chr5_2:16972454-16972473 | None:intergenic | 45.0% | |
| TGGCATTGCATACTGAAGTC+GGG | + | chr5_2:16972547-16972566 | Msa0760470:CDS | 45.0% | |
| AGTCGGGAAGACTCATTACA+AGG | + | chr5_2:16972563-16972582 | Msa0760470:CDS | 45.0% | |
| ACTAACGACAAGACGGTCTA+TGG | + | chr5_2:16972608-16972627 | Msa0760470:CDS | 45.0% | |
| GACGGTCTATGGACTCAATT+CGG | + | chr5_2:16972619-16972638 | Msa0760470:CDS | 45.0% | |
| GCGAAATCTGGAGATATGGT+TGG | + | chr5_2:16972662-16972681 | Msa0760470:CDS | 45.0% | |
| AGAATCATTGGCGATCTCGA+GGG | + | chr5_2:16972687-16972706 | Msa0760470:CDS | 45.0% | |
| !!! | GGGTTTTGGTTTCTGTGGTG+TGG | - | chr5_2:16969272-16969291 | None:intergenic | 50.0% |
| !! | ACGAGGAGAAGCGTCTCTTA+CGG | + | chr5_2:16969580-16969599 | Msa0760470:CDS | 50.0% |
| !! | AGCGGTGGTGGAAGATTCTA+AGG | + | chr5_2:16969641-16969660 | Msa0760470:CDS | 50.0% |
| AAGAAGGTTTCAGGAGGAGG+AGG | + | chr5_2:16969725-16969744 | Msa0760470:CDS | 50.0% | |
| AGAAGGTTTCAGGAGGAGGA+GGG | + | chr5_2:16969726-16969745 | Msa0760470:CDS | 50.0% | |
| TTTCAGGAGGAGGAGGGATT+GGG | + | chr5_2:16969732-16969751 | Msa0760470:CDS | 50.0% | |
| GGGAGTAGGGAAGATATGGT+GGG | + | chr5_2:16969762-16969781 | Msa0760470:CDS | 50.0% | |
| GGAGTAGGGAAGATATGGTG+GGG | + | chr5_2:16969763-16969782 | Msa0760470:CDS | 50.0% | |
| TCATGTCTCGTGTCTGTCAC+CGG | - | chr5_2:16970199-16970218 | None:intergenic | 50.0% | |
| TGTCCGACACTAGACATTGG+TGG | + | chr5_2:16970407-16970426 | Msa0760470:intron | 50.0% | |
| GTCCGACACTAGACATTGGT+GGG | + | chr5_2:16970408-16970427 | Msa0760470:intron | 50.0% | |
| TGCCCACCAATGTCTAGTGT+CGG | - | chr5_2:16970413-16970432 | None:intergenic | 50.0% | |
| GGCAGAGACAGTAAACAACC+CGG | - | chr5_2:16970829-16970848 | None:intergenic | 50.0% | |
| GGGTTGTTTACTGTCTCTGC+CGG | + | chr5_2:16970828-16970847 | Msa0760470:intron | 50.0% | |
| GCAAGTTGCAACCATGTCAC+CGG | - | chr5_2:16970850-16970869 | None:intergenic | 50.0% | |
| !! | TTCAAAAAGCACCCACCAGG+GGG | + | chr5_2:16971075-16971094 | Msa0760470:intron | 50.0% |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr5_2:16971595-16971614 | None:intergenic | 50.0% | |
| GCATTTCTGATAGGGCAACC+CGG | - | chr5_2:16971753-16971772 | None:intergenic | 50.0% | |
| ATCACCATCTACCTTCCAGG+GGG | - | chr5_2:16972047-16972066 | None:intergenic | 50.0% | |
| TGGTAAGGATGTTCCGTCCA+AGG | + | chr5_2:16972129-16972148 | Msa0760470:CDS | 50.0% | |
| ! | AAATGGTGGTGTCCCATGAC+AGG | - | chr5_2:16972374-16972393 | None:intergenic | 50.0% |
| CCGAAATTCTGAACTGAGGG+AGG | - | chr5_2:16972451-16972470 | None:intergenic | 50.0% | |
| GGGTCCGAAATTCTGAACTG+AGG | - | chr5_2:16972455-16972474 | None:intergenic | 50.0% | |
| CAGATGCATCCTGTTGAAGC+CGG | - | chr5_2:16972509-16972528 | None:intergenic | 50.0% | |
| CTCGAGATCGCCAATGATTC+TGG | - | chr5_2:16972688-16972707 | None:intergenic | 50.0% | |
| CAGAATCATTGGCGATCTCG+AGG | + | chr5_2:16972686-16972705 | Msa0760470:CDS | 50.0% | |
| GAATCATTGGCGATCTCGAG+GGG | + | chr5_2:16972688-16972707 | Msa0760470:CDS | 50.0% | |
| !! | GGTTTTGTGGAGTGGGTAGC+TGG | - | chr5_2:16969169-16969188 | None:intergenic | 55.0% |
| GGAGATCGTGAGGTTGAGAG+CGG | + | chr5_2:16969623-16969642 | Msa0760470:CDS | 55.0% | |
| !! | GGAAGATTCTAAGGCGCGTG+TGG | + | chr5_2:16969650-16969669 | Msa0760470:CDS | 55.0% |
| !! | AGATTCTAAGGCGCGTGTGG+AGG | + | chr5_2:16969653-16969672 | Msa0760470:CDS | 55.0% |
| TAAGGCGCGTGTGGAGGATT+TGG | + | chr5_2:16969659-16969678 | Msa0760470:CDS | 55.0% | |
| ! | TGTGGAGGATTTGGAGCGTG+AGG | + | chr5_2:16969668-16969687 | Msa0760470:CDS | 55.0% |
| GTTTCAGGAGGAGGAGGGAT+TGG | + | chr5_2:16969731-16969750 | Msa0760470:CDS | 55.0% | |
| GTGCGGGAGTAGGGAAGATA+TGG | + | chr5_2:16969758-16969777 | Msa0760470:CDS | 55.0% | |
| CGGGAGTAGGGAAGATATGG+TGG | + | chr5_2:16969761-16969780 | Msa0760470:CDS | 55.0% | |
| TTGTGGCAACTGGGGTCCTT+GGG | + | chr5_2:16970608-16970627 | Msa0760470:intron | 55.0% | |
| TACTGTCTCTGCCGGTGACA+TGG | + | chr5_2:16970836-16970855 | Msa0760470:intron | 55.0% | |
| ! | CTGCAAAGGGCATGTGTGGA+TGG | + | chr5_2:16970979-16970998 | Msa0760470:intron | 55.0% |
| GGGCATGTGTGGATGGAACT+AGG | + | chr5_2:16970986-16971005 | Msa0760470:intron | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr5_2:16971630-16971649 | Msa0760470:intron | 55.0% | |
| !! | GGAAGCATTCCGGCTTCAAC+AGG | + | chr5_2:16972497-16972516 | Msa0760470:CDS | 55.0% |
| ATCTCGAGGGGATTCTGGCA+AGG | + | chr5_2:16972700-16972719 | Msa0760470:CDS | 55.0% | |
| TCTCGAGGGGATTCTGGCAA+GGG | + | chr5_2:16972701-16972720 | Msa0760470:CDS | 55.0% | |
| CAGAAACTCATGGCGCGACG+AGG | + | chr5_2:16969563-16969582 | Msa0760470:CDS | 60.0% | |
| GATCGTGAGGTTGAGAGCGG+TGG | + | chr5_2:16969626-16969645 | Msa0760470:CDS | 60.0% | |
| AGGAGGAGGAGGGATTGGGT+GGG | + | chr5_2:16969736-16969755 | Msa0760470:CDS | 60.0% | |
| ATTGGGTGGGTGCGGGAGTA+GGG | + | chr5_2:16969749-16969768 | Msa0760470:CDS | 60.0% | |
| !! | TATGGTGGGGAGCACTGCTG+AGG | + | chr5_2:16969776-16969795 | Msa0760470:CDS | 60.0% |
| GTTGTGGCAACTGGGGTCCT+TGG | + | chr5_2:16970607-16970626 | Msa0760470:intron | 60.0% | |
| GAGGGTAACCTTGGCGCAAC+TGG | + | chr5_2:16971584-16971603 | Msa0760470:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr5_2:16971699-16971718 | Msa0760470:intron | 60.0% |
| CTGAAGCTCCCGCATACGCA+GGG | - | chr5_2:16971726-16971745 | None:intergenic | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | - | chr5_2:16971727-16971746 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr5_2:16971731-16971750 | Msa0760470:intron | 60.0% | |
| GAGTCCCCCTGGAAGGTAGA+TGG | + | chr5_2:16972040-16972059 | Msa0760470:CDS | 60.0% | |
| GAACTGAGGGAGGGTTCGCA+CGG | - | chr5_2:16972441-16972460 | None:intergenic | 60.0% | |
| TGGCGATCTCGAGGGGATTC+TGG | + | chr5_2:16972695-16972714 | Msa0760470:CDS | 60.0% | |
| GAGGGGATTCTGGCAAGGGA+CGG | + | chr5_2:16972705-16972724 | Msa0760470:CDS | 60.0% | |
| CCTCACGATCTCCTCCGACG+CGG | - | chr5_2:16969616-16969635 | None:intergenic | 65.0% | |
| CGTGAGGTTGAGAGCGGTGG+TGG | + | chr5_2:16969629-16969648 | Msa0760470:CDS | 65.0% | |
| CAGGAGGAGGAGGGATTGGG+TGG | + | chr5_2:16969735-16969754 | Msa0760470:CDS | 65.0% | |
| GAGGAGGGATTGGGTGGGTG+CGG | + | chr5_2:16969741-16969760 | Msa0760470:CDS | 65.0% | |
| AGGAGGGATTGGGTGGGTGC+GGG | + | chr5_2:16969742-16969761 | Msa0760470:CDS | 65.0% | |
| GATTGGGTGGGTGCGGGAGT+AGG | + | chr5_2:16969748-16969767 | Msa0760470:CDS | 65.0% | |
| TGGCAACTGGGGTCCTTGGG+AGG | + | chr5_2:16970611-16970630 | Msa0760470:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr5_2:16971701-16971720 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr5_2:16971714-16971733 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr5_2:16971715-16971734 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr5_2:16971714-16971733 | Msa0760470:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr5_2:16971715-16971734 | Msa0760470:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr5_2:16971732-16971751 | Msa0760470:intron | 65.0% | |
| CCAGGGGGACTCCCTTCTGA+GGG | - | chr5_2:16972032-16972051 | None:intergenic | 65.0% | |
| TCCAGGGGGACTCCCTTCTG+AGG | - | chr5_2:16972033-16972052 | None:intergenic | 65.0% | |
| CAGAAGGGAGTCCCCCTGGA+AGG | + | chr5_2:16972033-16972052 | Msa0760470:intron | 65.0% | |
| ACGGCGAATCGACGCCGCGT+CGG | + | chr5_2:16969599-16969618 | Msa0760470:CDS | 70.0% | |
| CCGCGTCGGAGGAGATCGTG+AGG | + | chr5_2:16969613-16969632 | Msa0760470:CDS | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr5_2:16971716-16971735 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr5_2:16971720-16971739 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr5_2:16971721-16971740 | None:intergenic | 70.0% | |
| CCCTCAGAAGGGAGTCCCCC+TGG | + | chr5_2:16972029-16972048 | Msa0760470:intron | 70.0% | |
| GCGAATCGACGCCGCGTCGG+AGG | + | chr5_2:16969602-16969621 | Msa0760470:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 16969156 | 16972946 | 16969156 | ID=Msa0760470;Name=Msa0760470 |
| chr5_2 | mRNA | 16969156 | 16972946 | 16969156 | ID=Msa0760470-mRNA-1;Parent=Msa0760470;Name=Msa0760470-mRNA-1;_AED=0.04;_eAED=0.04;_QI=159|1|1|1|0.75|0.6|5|167|395 |
| chr5_2 | exon | 16969156 | 16969237 | 16969156 | ID=Msa0760470-mRNA-1:exon:7498;Parent=Msa0760470-mRNA-1 |
| chr5_2 | exon | 16969259 | 16969923 | 16969259 | ID=Msa0760470-mRNA-1:exon:7499;Parent=Msa0760470-mRNA-1 |
| chr5_2 | exon | 16971890 | 16971945 | 16971890 | ID=Msa0760470-mRNA-1:exon:7500;Parent=Msa0760470-mRNA-1 |
| chr5_2 | exon | 16972036 | 16972228 | 16972036 | ID=Msa0760470-mRNA-1:exon:7501;Parent=Msa0760470-mRNA-1 |
| chr5_2 | exon | 16972429 | 16972946 | 16972429 | ID=Msa0760470-mRNA-1:exon:7502;Parent=Msa0760470-mRNA-1 |
| chr5_2 | five_prime_UTR | 16969156 | 16969237 | 16969156 | ID=Msa0760470-mRNA-1:five_prime_utr;Parent=Msa0760470-mRNA-1 |
| chr5_2 | five_prime_UTR | 16969259 | 16969335 | 16969259 | ID=Msa0760470-mRNA-1:five_prime_utr;Parent=Msa0760470-mRNA-1 |
| chr5_2 | CDS | 16969336 | 16969923 | 16969336 | ID=Msa0760470-mRNA-1:cds;Parent=Msa0760470-mRNA-1 |
| chr5_2 | CDS | 16971890 | 16971945 | 16971890 | ID=Msa0760470-mRNA-1:cds;Parent=Msa0760470-mRNA-1 |
| chr5_2 | CDS | 16972036 | 16972228 | 16972036 | ID=Msa0760470-mRNA-1:cds;Parent=Msa0760470-mRNA-1 |
| chr5_2 | CDS | 16972429 | 16972779 | 16972429 | ID=Msa0760470-mRNA-1:cds;Parent=Msa0760470-mRNA-1 |
| chr5_2 | three_prime_UTR | 16972780 | 16972946 | 16972780 | ID=Msa0760470-mRNA-1:three_prime_utr;Parent=Msa0760470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
