Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761400 | sp|Q84WN0|Y4920_ARATH | 69.832 | 358 | 103 | 1 | 63 | 415 | 62 | 419 | 0.0 | 524 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761400 | A9YWR5 | 97.393 | 422 | 11 | 0 | 1 | 422 | 1 | 422 | 0.0 | 853 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0761400 | Msa0803860 | 0.883342 | 4.868202e-71 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761400 | MtrunA17_Chr5g0411611 | 97.393 | 422 | 11 | 0 | 1 | 422 | 1 | 422 | 0.0 | 853 |
| Msa0761400 | MtrunA17_Chr2g0291781 | 44.611 | 334 | 184 | 1 | 71 | 403 | 70 | 403 | 1.23e-106 | 320 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761400 | AT4G37920.1 | 69.832 | 358 | 103 | 1 | 63 | 415 | 62 | 419 | 0.0 | 524 |
| Msa0761400 | AT1G36320.1 | 45.181 | 332 | 180 | 2 | 74 | 403 | 83 | 414 | 1.03e-102 | 311 |
Find 128 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGTAGCTTTATTTCTTT+TGG | 0.108146 | 5_2:+18632177 | None:intergenic |
| GGAGGAAATACTTGGTATTT+AGG | 0.164229 | 5_2:-18634584 | Msa0761400:CDS |
| ATTAAGGATATCATCAAATT+TGG | 0.219733 | 5_2:+18633760 | None:intergenic |
| CGCCAAAGGAACTGCATAAA+TGG | 0.220810 | 5_2:-18631947 | Msa0761400:CDS |
| TCAGAGGTTGAAATTGTAAA+AGG | 0.263766 | 5_2:-18634678 | Msa0761400:CDS |
| CGATAATACTCTGATGAATA+TGG | 0.264010 | 5_2:-18633804 | Msa0761400:CDS |
| ACAAGTCCTCTTATATAAAA+AGG | 0.271947 | 5_2:+18631593 | None:intergenic |
| GTATAAAGCATTAGGATCTT+TGG | 0.272436 | 5_2:+18632074 | None:intergenic |
| GAAGGTGGTGGTGATGTTTA+AGG | 0.279961 | 5_2:+18635593 | None:intergenic |
| GAGAAGCACATAGAAGAAAA+TGG | 0.291303 | 5_2:+18635475 | None:intergenic |
| ATTGAACCAATGAAGATCTT+TGG | 0.302329 | 5_2:-18631486 | Msa0761400:three_prime_UTR |
| TCTTCTATTTGTAGGTTATA+TGG | 0.305355 | 5_2:-18631201 | Msa0761400:three_prime_UTR |
| TACTATTGAGAAGGAATATA+TGG | 0.309142 | 5_2:-18631814 | Msa0761400:CDS |
| AAATTCTGAGTTATGAGTTT+TGG | 0.312860 | 5_2:+18635504 | None:intergenic |
| AGTTTATGTGTGTTGGATTA+CGG | 0.314212 | 5_2:+18631276 | None:intergenic |
| TTTCCGCCTTCGTGCAACTA+TGG | 0.319742 | 5_2:+18634023 | None:intergenic |
| GTTTATGTGTGTTGGATTAC+GGG | 0.329587 | 5_2:+18631277 | None:intergenic |
| GAGGAAATACTTGGTATTTA+GGG | 0.333790 | 5_2:-18634583 | Msa0761400:CDS |
| TTTCCTCCAGTCCTTTGATT+TGG | 0.345589 | 5_2:+18634599 | None:intergenic |
| TCATCTTCAGTCTCAGACTT+TGG | 0.352848 | 5_2:+18631777 | None:intergenic |
| TCCAGAGTTCTTCTATTTGT+AGG | 0.353298 | 5_2:-18631209 | Msa0761400:three_prime_UTR |
| TCTTACGTGTATAAAGCATT+AGG | 0.355481 | 5_2:+18632066 | None:intergenic |
| CATCGATGGAAGGAGAATTA+AGG | 0.364990 | 5_2:+18633744 | None:intergenic |
| CTACCACCAAAGATCTTCAT+TGG | 0.379198 | 5_2:+18631480 | None:intergenic |
| AAAGAACAAACAACCTCAAC+TGG | 0.380848 | 5_2:-18635647 | Msa0761400:five_prime_UTR |
| TCTTTGTGGTCTTGTACAAT+TGG | 0.391209 | 5_2:+18632220 | None:intergenic |
| ATCCATTTATGCAGTTCCTT+TGG | 0.397798 | 5_2:+18631945 | None:intergenic |
| AAGGCAGAGAATCGCTCCTC+GGG | 0.398295 | 5_2:+18632132 | None:intergenic |
| AGAAGCACATAGAAGAAAAT+GGG | 0.399497 | 5_2:+18635476 | None:intergenic |
| TCTCCATGTCAGCTCTTCCT+TGG | 0.405324 | 5_2:+18634520 | None:intergenic |
| GGGACGAATGGAAGAAATAT+AGG | 0.410593 | 5_2:-18634563 | Msa0761400:CDS |
| AGTCCTTAGGCTGCTCTTTG+TGG | 0.422808 | 5_2:+18632206 | None:intergenic |
| ACGCCAGCGGAGGTTGGTTA+AGG | 0.425324 | 5_2:-18631428 | Msa0761400:three_prime_UTR |
| TTGGCAACAGCTTTCTCCCC+TGG | 0.430811 | 5_2:-18632111 | Msa0761400:CDS |
| AACAACCTCTGAATAACTAT+AGG | 0.451269 | 5_2:+18631849 | None:intergenic |
| GAGTTCACCAAGGTCATGAT+AGG | 0.455356 | 5_2:+18631299 | None:intergenic |
| ATTATCATTGAAAGGGAAGA+AGG | 0.456003 | 5_2:+18635575 | None:intergenic |
| GTATATAAGTTTATGTGTGT+TGG | 0.461074 | 5_2:+18631269 | None:intergenic |
| CAGAGATTATTATCATTGAA+AGG | 0.473233 | 5_2:+18635567 | None:intergenic |
| AGTTCGCTCACGCCTCATAA+TGG | 0.477011 | 5_2:-18631405 | Msa0761400:three_prime_UTR |
| TATTGTTGATAAGCGGTGCT+TGG | 0.480704 | 5_2:-18633664 | Msa0761400:CDS |
| AACAGTGATTAGCTCTGACT+TGG | 0.487517 | 5_2:-18631239 | Msa0761400:three_prime_UTR |
| CGAGGAGCGATTCTCTGCCT+TGG | 0.487679 | 5_2:-18632130 | Msa0761400:CDS |
| AATTTACTTCATTGGGGAGA+AGG | 0.490271 | 5_2:-18634476 | Msa0761400:CDS |
| AGCTCTTCATGTTCCAGTTG+AGG | 0.490593 | 5_2:+18635634 | None:intergenic |
| ATTGCAGATTGATGATGAAA+TGG | 0.490861 | 5_2:-18634100 | Msa0761400:intron |
| TGCAGCCCTCATGCCAGCAG+TGG | 0.492495 | 5_2:+18631368 | None:intergenic |
| TTGGCTTCATGTTCATCACC+AGG | 0.493887 | 5_2:+18632093 | None:intergenic |
| GCGGACTCAACTCCCACTGC+TGG | 0.494993 | 5_2:-18631381 | Msa0761400:three_prime_UTR |
| TGCAGACACTTACGACAGCC+TGG | 0.498459 | 5_2:-18633962 | Msa0761400:CDS |
| GTTGAGTCCGCGCCATTATG+AGG | 0.498478 | 5_2:+18631393 | None:intergenic |
| TCAGAGGTTGTTTATCCTCA+AGG | 0.499529 | 5_2:-18631838 | Msa0761400:CDS |
| AGCTTCTTCATTAGATGCCA+AGG | 0.500385 | 5_2:-18634537 | Msa0761400:CDS |
| ATTTACTTCATTGGGGAGAA+GGG | 0.501755 | 5_2:-18634475 | Msa0761400:CDS |
| TTTGTCAGTGATGAGCTTTG+TGG | 0.511556 | 5_2:-18631322 | Msa0761400:three_prime_UTR |
| ATTGTTGATAAGCGGTGCTT+GGG | 0.512100 | 5_2:-18633663 | Msa0761400:CDS |
| AGAGATTATTATCATTGAAA+GGG | 0.519432 | 5_2:+18635568 | None:intergenic |
| ACCTACAAATAGAAGAACTC+TGG | 0.521831 | 5_2:+18631208 | None:intergenic |
| GCAGCCCTCATGCCAGCAGT+GGG | 0.525391 | 5_2:+18631369 | None:intergenic |
| AGAAAACCAAATCAAAGGAC+TGG | 0.525978 | 5_2:-18634605 | Msa0761400:CDS |
| ATGCCAAGGAAGAGCTGACA+TGG | 0.533162 | 5_2:-18634523 | Msa0761400:CDS |
| AAAGGAAGGAGTGAGAAAGT+TGG | 0.535741 | 5_2:+18635539 | None:intergenic |
| ACTTGGTATTTAGGGACGAA+TGG | 0.536158 | 5_2:-18634575 | Msa0761400:CDS |
| AAAGGACTGGAGGAAATACT+TGG | 0.536396 | 5_2:-18634592 | Msa0761400:CDS |
| GGAGAATGATCCAACAATGA+AGG | 0.538428 | 5_2:-18634502 | Msa0761400:CDS |
| GGAAGGAGTGAGAAAGTTGG+TGG | 0.540171 | 5_2:+18635542 | None:intergenic |
| ATTGGGGAGAAGGGTGAAGA+AGG | 0.543592 | 5_2:-18634466 | Msa0761400:intron |
| TTTGTGGCCTATCATGACCT+TGG | 0.543643 | 5_2:-18631306 | Msa0761400:three_prime_UTR |
| CTAGTCTACAGATATTTGAA+AGG | 0.543879 | 5_2:+18631627 | None:intergenic |
| AGTATTATCGTATGCACCGA+CGG | 0.545659 | 5_2:+18633817 | None:intergenic |
| ACTCCTTAACCAACCTCCGC+TGG | 0.546262 | 5_2:+18631425 | None:intergenic |
| CAAGGCAGAGAATCGCTCCT+CGG | 0.548857 | 5_2:+18632131 | None:intergenic |
| TACTCTACGCCAGCGGAGGT+TGG | 0.549223 | 5_2:-18631434 | Msa0761400:three_prime_UTR |
| TGGCTTCATGTTCATCACCA+GGG | 0.549446 | 5_2:+18632094 | None:intergenic |
| TTTGTTGAACAGGGATCGCT+AGG | 0.551235 | 5_2:-18633862 | Msa0761400:intron |
| CAATGAAGATCTTTGGTGGT+AGG | 0.552094 | 5_2:-18631479 | Msa0761400:three_prime_UTR |
| TGTACTTGCTAATTACTCAC+TGG | 0.561345 | 5_2:+18631345 | None:intergenic |
| TTGCTCCTCGACTTGAGTCA+TGG | 0.563177 | 5_2:+18634701 | None:intergenic |
| GAACCAATGAAGATCTTTGG+TGG | 0.566033 | 5_2:-18631483 | Msa0761400:three_prime_UTR |
| TCATTGATATTGTTGATAAG+CGG | 0.566445 | 5_2:-18633671 | Msa0761400:CDS |
| GGCTTCATGTTCATCACCAG+GGG | 0.567936 | 5_2:+18632095 | None:intergenic |
| GGAGACGTTAGATGCTGCAC+AGG | 0.568008 | 5_2:-18633783 | Msa0761400:CDS |
| AATCAGATTTGAGAGAAGCT+AGG | 0.570039 | 5_2:-18631884 | Msa0761400:CDS |
| AGGACTTGTATTATTTCACC+AGG | 0.575361 | 5_2:-18631579 | Msa0761400:three_prime_UTR |
| AACTCCCACTGCTGGCATGA+GGG | 0.575821 | 5_2:-18631373 | Msa0761400:three_prime_UTR |
| TAGTCTACAGATATTTGAAA+GGG | 0.577368 | 5_2:+18631628 | None:intergenic |
| CAACTCCCACTGCTGGCATG+AGG | 0.582040 | 5_2:-18631374 | Msa0761400:three_prime_UTR |
| CTGCAATAAGAGAGAGGTAG+CGG | 0.582443 | 5_2:+18633980 | None:intergenic |
| CCTCAAGGATACTATTGAGA+AGG | 0.585652 | 5_2:-18631823 | Msa0761400:CDS |
| GAATGAGAAAACCAAATCAA+AGG | 0.587964 | 5_2:-18634610 | Msa0761400:CDS |
| TGCAACTATGGCATTAATGT+CGG | 0.589061 | 5_2:+18634035 | None:intergenic |
| ATTGAAAGGGAAGAAGGTGG+TGG | 0.591862 | 5_2:+18635581 | None:intergenic |
| ATGGAAGCACTACTAGCTTG+TGG | 0.592140 | 5_2:+18634720 | None:intergenic |
| AATTACCATCACGATCATCC+AGG | 0.596203 | 5_2:+18633944 | None:intergenic |
| ATCTACAACAATGAAGAATG+AGG | 0.596937 | 5_2:-18633627 | Msa0761400:intron |
| ATGCCATAGTTGCACGAAGG+CGG | 0.597285 | 5_2:-18634026 | Msa0761400:CDS |
| TGAACAGGGATCGCTAGGCT+AGG | 0.600347 | 5_2:-18633857 | Msa0761400:intron |
| GAGTGAAGTGAAACTCACTT+TGG | 0.601689 | 5_2:-18635681 | Msa0761400:five_prime_UTR |
| AGGGGAGAAAGCTGTTGCCA+AGG | 0.601801 | 5_2:+18632113 | None:intergenic |
| CGAAGGCGGAAAGATTTCAC+AGG | 0.603269 | 5_2:-18634012 | Msa0761400:CDS |
| CTGATCCTATAGTTATTCAG+AGG | 0.605259 | 5_2:-18631854 | Msa0761400:CDS |
| ATGAAGAAATGAATGAACGT+AGG | 0.605985 | 5_2:-18631667 | Msa0761400:three_prime_UTR |
| CAAAAGCCTTGCAAAAGCAA+AGG | 0.608626 | 5_2:-18633705 | Msa0761400:CDS |
| AGACCACAAAGAGCAGCCTA+AGG | 0.611087 | 5_2:-18632209 | Msa0761400:CDS |
| AGGACACTATGAACTTCTCA+AGG | 0.614050 | 5_2:-18634076 | Msa0761400:CDS |
| TTTCTTACAAGCGACATCGA+TGG | 0.615903 | 5_2:+18633730 | None:intergenic |
| GCTAAATGCTTATCTGCCGT+CGG | 0.620400 | 5_2:-18633833 | Msa0761400:CDS |
| CCTTCTCAATAGTATCCTTG+AGG | 0.620696 | 5_2:+18631823 | None:intergenic |
| TTACAAGCGACATCGATGGA+AGG | 0.623264 | 5_2:+18633734 | None:intergenic |
| GATTTACTCTACGCCAGCGG+AGG | 0.625707 | 5_2:-18631438 | Msa0761400:three_prime_UTR |
| TGCTTCCATGACTCAAGTCG+AGG | 0.625947 | 5_2:-18634706 | Msa0761400:CDS |
| ATAATTAAACAGTACGCCAA+AGG | 0.628128 | 5_2:-18631961 | Msa0761400:intron |
| ACTATGGCATTAATGTCGGT+CGG | 0.629779 | 5_2:+18634039 | None:intergenic |
| CAGATTGATGATGAAATGGA+AGG | 0.633538 | 5_2:-18634096 | Msa0761400:CDS |
| ATCATTGAAAGGGAAGAAGG+TGG | 0.639345 | 5_2:+18635578 | None:intergenic |
| AAGTGTCTGCAATAAGAGAG+AGG | 0.645459 | 5_2:+18633974 | None:intergenic |
| TGAACGTAGGAAGAATGAAG+TGG | 0.646469 | 5_2:-18631654 | Msa0761400:three_prime_UTR |
| TCAAGTCGAGGAGCAATCAG+AGG | 0.653751 | 5_2:-18634694 | Msa0761400:CDS |
| AAACCAAATCAAAGGACTGG+AGG | 0.655210 | 5_2:-18634602 | Msa0761400:CDS |
| GACAGCCTGGATGATCGTGA+TGG | 0.655334 | 5_2:-18633949 | Msa0761400:intron |
| GAAGCACATAGAAGAAAATG+GGG | 0.667442 | 5_2:+18635477 | None:intergenic |
| TGGATTACGGGAGTTCACCA+AGG | 0.675885 | 5_2:+18631289 | None:intergenic |
| AGATGCATATAATCTGAACA+AGG | 0.677895 | 5_2:-18631910 | Msa0761400:CDS |
| GCTCACGCCTCATAATGGCG+CGG | 0.690372 | 5_2:-18631400 | Msa0761400:three_prime_UTR |
| AGGCAGAGAATCGCTCCTCG+GGG | 0.691645 | 5_2:+18632133 | None:intergenic |
| AGTGATTTACTCTACGCCAG+CGG | 0.725440 | 5_2:-18631441 | Msa0761400:three_prime_UTR |
| GCTAAACATCATAGACCCCG+AGG | 0.743122 | 5_2:-18632148 | Msa0761400:CDS |
| TTAATGCCATAGTTGCACGA+AGG | 0.765699 | 5_2:-18634029 | Msa0761400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAAAACAAAAAAAAAAA+AGG | + | chr5_2:18631531-18631550 | None:intergenic | 10.0% |
| !!! | AAAATGAAATTTTAAAAATG+AGG | + | chr5_2:18633280-18633299 | None:intergenic | 10.0% |
| !!! | ATTTTTAAAATTTCATTTTC+TGG | - | chr5_2:18633281-18633300 | Msa0761400:intron | 10.0% |
| !! | TTTAATAAAGAAATAATACA+AGG | + | chr5_2:18634529-18634548 | None:intergenic | 10.0% |
| !!! | AAAAATATATCTTTTCTTTA+AGG | - | chr5_2:18634847-18634866 | Msa0761400:intron | 10.0% |
| !!! | TTTGTTGTTCTAATTTATTA+AGG | - | chr5_2:18631572-18631591 | Msa0761400:three_prime_UTR | 15.0% |
| !!! | TAATTTATTAAGGATTTGTT+TGG | - | chr5_2:18631582-18631601 | Msa0761400:three_prime_UTR | 15.0% |
| !! | ACTTATTATATAAGTTATCT+TGG | - | chr5_2:18631690-18631709 | Msa0761400:three_prime_UTR | 15.0% |
| !!! | TAAAAATTGAAATTCCTTTT+AGG | - | chr5_2:18632124-18632143 | Msa0761400:CDS | 15.0% |
| !! | TTATATGGAAGAAAAAAAAA+TGG | - | chr5_2:18635682-18635701 | Msa0761400:five_prime_UTR | 15.0% |
| !! | AGAGATTATTATCATTGAAA+GGG | + | chr5_2:18631303-18631322 | None:intergenic | 20.0% |
| !! | AAGGAAAAATTTACTTCATT+GGG | - | chr5_2:18632385-18632404 | Msa0761400:intron | 20.0% |
| !!! | TTTTGTTACCAAATAAATGT+TGG | - | chr5_2:18632476-18632495 | Msa0761400:intron | 20.0% |
| !! | ATTAAGGATATCATCAAATT+TGG | + | chr5_2:18633111-18633130 | None:intergenic | 20.0% |
| !! | TATTTATGTCCACTTATTAA+AGG | - | chr5_2:18633454-18633473 | Msa0761400:intron | 20.0% |
| !!! | TAATTTCATTTTCGCTTAAT+TGG | + | chr5_2:18633484-18633503 | None:intergenic | 20.0% |
| !! | ATAAAGAAAATGTATTTCGT+TGG | + | chr5_2:18633956-18633975 | None:intergenic | 20.0% |
| !! | AACATAATCACATAACTATT+AGG | - | chr5_2:18634080-18634099 | Msa0761400:CDS | 20.0% |
| !!! | ACCTATATAATTTTGTTACT+TGG | - | chr5_2:18634422-18634441 | Msa0761400:intron | 20.0% |
| !! | TCCAAGTAACAAAATTATAT+AGG | + | chr5_2:18634426-18634445 | None:intergenic | 20.0% |
| !! | GTTTAATGTTATAAGAACAA+AGG | + | chr5_2:18634492-18634511 | None:intergenic | 20.0% |
| !! | ATTATTCACATACAAATTAG+AGG | + | chr5_2:18634892-18634911 | None:intergenic | 20.0% |
| !!! | GTTTTTCCTTTTTATATAAG+AGG | - | chr5_2:18635269-18635288 | Msa0761400:intron | 20.0% |
| !!! | AAAATTTTGTAATTGAAACC+TGG | + | chr5_2:18635310-18635329 | None:intergenic | 20.0% |
| !!! | TCAATTACAAAATTTTAAGC+AGG | - | chr5_2:18635314-18635333 | Msa0761400:intron | 20.0% |
| ! | CAGAGATTATTATCATTGAA+AGG | + | chr5_2:18631304-18631323 | None:intergenic | 25.0% |
| !!! | TTTTGGTTTTTGGTTTTGAA+AGG | + | chr5_2:18631350-18631369 | None:intergenic | 25.0% |
| !! | AAATTCTGAGTTATGAGTTT+TGG | + | chr5_2:18631367-18631386 | None:intergenic | 25.0% |
| !! | TATTGTTTTCCATCTCAATT+TGG | - | chr5_2:18631427-18631446 | Msa0761400:three_prime_UTR | 25.0% |
| !!! | TCTTTTGAGTTTTTTCAAGT+TGG | - | chr5_2:18631452-18631471 | Msa0761400:three_prime_UTR | 25.0% |
| !!! | CTTTTGAGTTTTTTCAAGTT+GGG | - | chr5_2:18631453-18631472 | Msa0761400:three_prime_UTR | 25.0% |
| !! | GTAAATTTTTCCTTCATTGT+TGG | + | chr5_2:18632379-18632398 | None:intergenic | 25.0% |
| ! | GAAGGAAAAATTTACTTCAT+TGG | - | chr5_2:18632384-18632403 | Msa0761400:intron | 25.0% |
| ! | AGGAAAAATTTACTTCATTG+GGG | - | chr5_2:18632386-18632405 | Msa0761400:intron | 25.0% |
| !! | TGCATTTTCCAACATTTATT+TGG | + | chr5_2:18632487-18632506 | None:intergenic | 25.0% |
| ! | AACAAATTATGGGAAAAAGA+AGG | + | chr5_2:18632516-18632535 | None:intergenic | 25.0% |
| !! | TTTATCCTATTTGTTGAACA+GGG | - | chr5_2:18632997-18633016 | Msa0761400:intron | 25.0% |
| !! | TCATTGATATTGTTGATAAG+CGG | - | chr5_2:18633197-18633216 | Msa0761400:intron | 25.0% |
| ! | AATAAGCAAGCATTATATTC+TGG | + | chr5_2:18633424-18633443 | None:intergenic | 25.0% |
| !! | ATTGGTTTACCTTTAATAAG+TGG | + | chr5_2:18633466-18633485 | None:intergenic | 25.0% |
| ! | TTATCTGTTGTAACTATCTT+AGG | + | chr5_2:18633594-18633613 | None:intergenic | 25.0% |
| !!! | TATAGACTTTTAGCTATTGA+CGG | + | chr5_2:18633656-18633675 | None:intergenic | 25.0% |
| ! | TCAATCTGTTCAACATTTAT+GGG | + | chr5_2:18634353-18634372 | None:intergenic | 25.0% |
| ! | TTCAATCTGTTCAACATTTA+TGG | + | chr5_2:18634354-18634373 | None:intergenic | 25.0% |
| !!! | TTATGGCCTATATTTTTTAG+AGG | - | chr5_2:18634384-18634403 | Msa0761400:intron | 25.0% |
| !! | ATGACACCTCTAAAAAATAT+AGG | + | chr5_2:18634393-18634412 | None:intergenic | 25.0% |
| !!! | TATATTTTTTAGAGGTGTCA+TGG | - | chr5_2:18634392-18634411 | Msa0761400:intron | 25.0% |
| ! | ATTTGGCATAAAACAAGAAT+AGG | + | chr5_2:18634552-18634571 | None:intergenic | 25.0% |
| !!! | TCAGTAGCTTTATTTCTTTT+GGG | + | chr5_2:18634693-18634712 | None:intergenic | 25.0% |
| !!! | TTCAGTAGCTTTATTTCTTT+TGG | + | chr5_2:18634694-18634713 | None:intergenic | 25.0% |
| ! | TACTATTGAGAAGGAATATA+TGG | - | chr5_2:18635054-18635073 | Msa0761400:intron | 25.0% |
| ! | TAGTCTACAGATATTTGAAA+GGG | + | chr5_2:18635243-18635262 | None:intergenic | 25.0% |
| ! | ACAAGTCCTCTTATATAAAA+AGG | + | chr5_2:18635278-18635297 | None:intergenic | 25.0% |
| ! | GTATATAAGTTTATGTGTGT+TGG | + | chr5_2:18635602-18635621 | None:intergenic | 25.0% |
| ! | TCTTCTATTTGTAGGTTATA+TGG | - | chr5_2:18635667-18635686 | Msa0761400:five_prime_UTR | 25.0% |
| ATTATCATTGAAAGGGAAGA+AGG | + | chr5_2:18631296-18631315 | None:intergenic | 30.0% | |
| !!! | GAGTTATGAGTTTTGGTTTT+TGG | + | chr5_2:18631360-18631379 | None:intergenic | 30.0% |
| ! | AGAAGCACATAGAAGAAAAT+GGG | + | chr5_2:18631395-18631414 | None:intergenic | 30.0% |
| GATGGAAAACAATACTTACT+GGG | + | chr5_2:18631421-18631440 | None:intergenic | 30.0% | |
| AGATGGAAAACAATACTTAC+TGG | + | chr5_2:18631422-18631441 | None:intergenic | 30.0% | |
| TGTTACTGTAATGAACACAA+AGG | + | chr5_2:18631497-18631516 | None:intergenic | 30.0% | |
| !! | TTAGTAACAGAAAAAGCATC+AGG | + | chr5_2:18631788-18631807 | None:intergenic | 30.0% |
| TAATTAGTTGTGAGACTGTT+TGG | - | chr5_2:18631853-18631872 | Msa0761400:CDS | 30.0% | |
| AGCTTATGAAAACAACTTCT+AGG | - | chr5_2:18631935-18631954 | Msa0761400:CDS | 30.0% | |
| ! | GCGCTTAATTAAGTTGTTTA+TGG | - | chr5_2:18632046-18632065 | Msa0761400:intron | 30.0% |
| AAGATACACCTAAAGACTAT+AGG | + | chr5_2:18632091-18632110 | None:intergenic | 30.0% | |
| TCAGAGGTTGAAATTGTAAA+AGG | - | chr5_2:18632190-18632209 | Msa0761400:CDS | 30.0% | |
| GAATGAGAAAACCAAATCAA+AGG | - | chr5_2:18632258-18632277 | Msa0761400:intron | 30.0% | |
| GAGGAAATACTTGGTATTTA+GGG | - | chr5_2:18632285-18632304 | Msa0761400:intron | 30.0% | |
| !! | ATTGCAGATTGATGATGAAA+TGG | - | chr5_2:18632768-18632787 | Msa0761400:intron | 30.0% |
| ! | CTTTATCCTATTTGTTGAAC+AGG | - | chr5_2:18632996-18633015 | Msa0761400:intron | 30.0% |
| CGATAATACTCTGATGAATA+TGG | - | chr5_2:18633064-18633083 | Msa0761400:intron | 30.0% | |
| ATCTACAACAATGAAGAATG+AGG | - | chr5_2:18633241-18633260 | Msa0761400:intron | 30.0% | |
| TACGTTCAAGCTTAAAACAT+AGG | + | chr5_2:18633351-18633370 | None:intergenic | 30.0% | |
| TGATTTATGCGTCAAAATGT+CGG | - | chr5_2:18633380-18633399 | Msa0761400:intron | 30.0% | |
| TGTAACTATCTTAGGAAGTT+AGG | + | chr5_2:18633586-18633605 | None:intergenic | 30.0% | |
| TGAATTCACATTAGAATGAG+AGG | - | chr5_2:18633860-18633879 | Msa0761400:intron | 30.0% | |
| GAATTCACATTAGAATGAGA+GGG | - | chr5_2:18633861-18633880 | Msa0761400:intron | 30.0% | |
| AATTCACATTAGAATGAGAG+GGG | - | chr5_2:18633862-18633881 | Msa0761400:intron | 30.0% | |
| AAAATGTATTTCGTTGGTAC+AGG | + | chr5_2:18633950-18633969 | None:intergenic | 30.0% | |
| TCAAACACTCACTATTGTTT+GGG | + | chr5_2:18634023-18634042 | None:intergenic | 30.0% | |
| TAAAACTTCAGTGAACAAGT+AGG | - | chr5_2:18634046-18634065 | Msa0761400:CDS | 30.0% | |
| AAAACTTCAGTGAACAAGTA+GGG | - | chr5_2:18634047-18634066 | Msa0761400:CDS | 30.0% | |
| ! | CACAATTCAAGAAACCTTTT+AGG | - | chr5_2:18634316-18634335 | Msa0761400:intron | 30.0% |
| ! | AATTCAAGAAACCTTTTAGG+TGG | - | chr5_2:18634319-18634338 | Msa0761400:intron | 30.0% |
| ATATAGGCCATAAAAACTCA+GGG | + | chr5_2:18634377-18634396 | None:intergenic | 30.0% | |
| AATATAGGCCATAAAAACTC+AGG | + | chr5_2:18634378-18634397 | None:intergenic | 30.0% | |
| TGTTATAAGAACAAAGGAAG+AGG | + | chr5_2:18634486-18634505 | None:intergenic | 30.0% | |
| AATATTGCTCAATATTGTGC+AGG | - | chr5_2:18634609-18634628 | Msa0761400:CDS | 30.0% | |
| !!! | CAGTAGCTTTATTTCTTTTG+GGG | + | chr5_2:18634692-18634711 | None:intergenic | 30.0% |
| ! | GTATAAAGCATTAGGATCTT+TGG | + | chr5_2:18634797-18634816 | None:intergenic | 30.0% |
| ! | TCTTACGTGTATAAAGCATT+AGG | + | chr5_2:18634805-18634824 | None:intergenic | 30.0% |
| ATAATTAAACAGTACGCCAA+AGG | - | chr5_2:18634907-18634926 | Msa0761400:intron | 30.0% | |
| AGATGCATATAATCTGAACA+AGG | - | chr5_2:18634958-18634977 | Msa0761400:intron | 30.0% | |
| AACAACCTCTGAATAACTAT+AGG | + | chr5_2:18635022-18635041 | None:intergenic | 30.0% | |
| !!! | CAATCAGAAGTGTTTTAAGT+TGG | - | chr5_2:18635118-18635137 | Msa0761400:intron | 30.0% |
| ATGAAGAAATGAATGAACGT+AGG | - | chr5_2:18635201-18635220 | Msa0761400:intron | 30.0% | |
| CTAGTCTACAGATATTTGAA+AGG | + | chr5_2:18635244-18635263 | None:intergenic | 30.0% | |
| ATTGAACCAATGAAGATCTT+TGG | - | chr5_2:18635382-18635401 | Msa0761400:intron | 30.0% | |
| AGTTTATGTGTGTTGGATTA+CGG | + | chr5_2:18635595-18635614 | None:intergenic | 30.0% | |
| !!! | GAGCTAATCACTGTTTTTTT+TGG | + | chr5_2:18635624-18635643 | None:intergenic | 30.0% |
| AAAGAACAAACAACCTCAAC+TGG | - | chr5_2:18631221-18631240 | Msa0761400:three_prime_UTR | 35.0% | |
| !!! | GGTTTTTGGTTTTGAAAGGA+AGG | + | chr5_2:18631346-18631365 | None:intergenic | 35.0% |
| GAAGCACATAGAAGAAAATG+GGG | + | chr5_2:18631394-18631413 | None:intergenic | 35.0% | |
| ! | GAGAAGCACATAGAAGAAAA+TGG | + | chr5_2:18631396-18631415 | None:intergenic | 35.0% |
| CAAAAGACACCAAATTGAGA+TGG | + | chr5_2:18631439-18631458 | None:intergenic | 35.0% | |
| AAGTTATCTTGGAGAGCTTA+TGG | - | chr5_2:18631701-18631720 | Msa0761400:three_prime_UTR | 35.0% | |
| AGAAAACCAAATCAAAGGAC+TGG | - | chr5_2:18632263-18632282 | Msa0761400:intron | 35.0% | |
| GGAGGAAATACTTGGTATTT+AGG | - | chr5_2:18632284-18632303 | Msa0761400:intron | 35.0% | |
| AATTTACTTCATTGGGGAGA+AGG | - | chr5_2:18632392-18632411 | Msa0761400:intron | 35.0% | |
| ATTTACTTCATTGGGGAGAA+GGG | - | chr5_2:18632393-18632412 | Msa0761400:intron | 35.0% | |
| CTATCATATATCTAGCCTCT+AGG | - | chr5_2:18632692-18632711 | Msa0761400:intron | 35.0% | |
| !!! | TGGTTTTAGAGCTTCTTCAT+CGG | - | chr5_2:18632723-18632742 | Msa0761400:intron | 35.0% |
| !! | CAGATTGATGATGAAATGGA+AGG | - | chr5_2:18632772-18632791 | Msa0761400:intron | 35.0% |
| TGCAACTATGGCATTAATGT+CGG | + | chr5_2:18632836-18632855 | None:intergenic | 35.0% | |
| AGTGGACATAAATACATCAG+AGG | + | chr5_2:18633448-18633467 | None:intergenic | 35.0% | |
| CACACATATTATGACACTCA+AGG | - | chr5_2:18633758-18633777 | Msa0761400:CDS | 35.0% | |
| CTCAAACACTCACTATTGTT+TGG | + | chr5_2:18634024-18634043 | None:intergenic | 35.0% | |
| TAACTATTAGGTGAAGTGTG+TGG | - | chr5_2:18634092-18634111 | Msa0761400:CDS | 35.0% | |
| ACAAGACATGAGTTCAACTT+CGG | + | chr5_2:18634136-18634155 | None:intergenic | 35.0% | |
| CTCATTATAGTCAGAAAGTG+TGG | - | chr5_2:18634198-18634217 | Msa0761400:intron | 35.0% | |
| CTGATCATATTTGCATCTCT+AGG | + | chr5_2:18634287-18634306 | None:intergenic | 35.0% | |
| ! | GATTGAACCCTGAGTTTTTA+TGG | - | chr5_2:18634367-18634386 | Msa0761400:intron | 35.0% |
| CCTTGTTAGGGAAATTACTT+TGG | + | chr5_2:18634456-18634475 | None:intergenic | 35.0% | |
| CCAAAGTAATTTCCCTAACA+AGG | - | chr5_2:18634453-18634472 | Msa0761400:intron | 35.0% | |
| !! | AGAGGTATTTCACCTTGTTA+GGG | + | chr5_2:18634468-18634487 | None:intergenic | 35.0% |
| !! | AAGAGGTATTTCACCTTGTT+AGG | + | chr5_2:18634469-18634488 | None:intergenic | 35.0% |
| TATGCAGTGAGTCTACAATT+TGG | + | chr5_2:18634569-18634588 | None:intergenic | 35.0% | |
| !! | TCTTTGTGGTCTTGTACAAT+TGG | + | chr5_2:18634651-18634670 | None:intergenic | 35.0% |
| ATCCATTTATGCAGTTCCTT+TGG | + | chr5_2:18634926-18634945 | None:intergenic | 35.0% | |
| AATCAGATTTGAGAGAAGCT+AGG | - | chr5_2:18634984-18635003 | Msa0761400:intron | 35.0% | |
| CTGATCCTATAGTTATTCAG+AGG | - | chr5_2:18635014-18635033 | Msa0761400:intron | 35.0% | |
| AGGACTTGTATTATTTCACC+AGG | - | chr5_2:18635289-18635308 | Msa0761400:intron | 35.0% | |
| ! | TGTACTTGCTAATTACTCAC+TGG | + | chr5_2:18635526-18635545 | None:intergenic | 35.0% |
| GTTTATGTGTGTTGGATTAC+GGG | + | chr5_2:18635594-18635613 | None:intergenic | 35.0% | |
| TCCAGAGTTCTTCTATTTGT+AGG | - | chr5_2:18635659-18635678 | Msa0761400:five_prime_UTR | 35.0% | |
| ACCTACAAATAGAAGAACTC+TGG | + | chr5_2:18635663-18635682 | None:intergenic | 35.0% | |
| GAGTGAAGTGAAACTCACTT+TGG | - | chr5_2:18631187-18631206 | Msa0761400:three_prime_UTR | 40.0% | |
| ATCATTGAAAGGGAAGAAGG+TGG | + | chr5_2:18631293-18631312 | None:intergenic | 40.0% | |
| AAAGGAAGGAGTGAGAAAGT+TGG | + | chr5_2:18631332-18631351 | None:intergenic | 40.0% | |
| !! | CAGAAAAAGCATCAGGAACA+TGG | + | chr5_2:18631781-18631800 | None:intergenic | 40.0% |
| !! | AAAGACTATAGGCTAGCTTG+TGG | + | chr5_2:18632080-18632099 | None:intergenic | 40.0% |
| ! | CAAGCTAGCCTATAGTCTTT+AGG | - | chr5_2:18632080-18632099 | Msa0761400:CDS | 40.0% |
| ! | TACTAGCTTGTGGACCTAAA+AGG | + | chr5_2:18632141-18632160 | None:intergenic | 40.0% |
| AAACCAAATCAAAGGACTGG+AGG | - | chr5_2:18632266-18632285 | Msa0761400:intron | 40.0% | |
| TTTCCTCCAGTCCTTTGATT+TGG | + | chr5_2:18632272-18632291 | None:intergenic | 40.0% | |
| AAAGGACTGGAGGAAATACT+TGG | - | chr5_2:18632276-18632295 | Msa0761400:intron | 40.0% | |
| ACTTGGTATTTAGGGACGAA+TGG | - | chr5_2:18632293-18632312 | Msa0761400:intron | 40.0% | |
| GGGACGAATGGAAGAAATAT+AGG | - | chr5_2:18632305-18632324 | Msa0761400:intron | 40.0% | |
| AGCTTCTTCATTAGATGCCA+AGG | - | chr5_2:18632331-18632350 | Msa0761400:intron | 40.0% | |
| GGAGAATGATCCAACAATGA+AGG | - | chr5_2:18632366-18632385 | Msa0761400:intron | 40.0% | |
| !! | TTCATCGGTTCTGTATGATC+AGG | - | chr5_2:18632738-18632757 | Msa0761400:intron | 40.0% |
| AGGACACTATGAACTTCTCA+AGG | - | chr5_2:18632792-18632811 | Msa0761400:intron | 40.0% | |
| ACTATGGCATTAATGTCGGT+CGG | + | chr5_2:18632832-18632851 | None:intergenic | 40.0% | |
| TTAATGCCATAGTTGCACGA+AGG | - | chr5_2:18632839-18632858 | Msa0761400:intron | 40.0% | |
| AAGTGTCTGCAATAAGAGAG+AGG | + | chr5_2:18632897-18632916 | None:intergenic | 40.0% | |
| AATTACCATCACGATCATCC+AGG | + | chr5_2:18632927-18632946 | None:intergenic | 40.0% | |
| AGTATTATCGTATGCACCGA+CGG | + | chr5_2:18633054-18633073 | None:intergenic | 40.0% | |
| CATCGATGGAAGGAGAATTA+AGG | + | chr5_2:18633127-18633146 | None:intergenic | 40.0% | |
| TTTCTTACAAGCGACATCGA+TGG | + | chr5_2:18633141-18633160 | None:intergenic | 40.0% | |
| CAAAAGCCTTGCAAAAGCAA+AGG | - | chr5_2:18633163-18633182 | Msa0761400:intron | 40.0% | |
| !! | CAAGTTCCTTTGCTTTTGCA+AGG | + | chr5_2:18633172-18633191 | None:intergenic | 40.0% |
| ! | TATTGTTGATAAGCGGTGCT+TGG | - | chr5_2:18633204-18633223 | Msa0761400:intron | 40.0% |
| ! | ATTGTTGATAAGCGGTGCTT+GGG | - | chr5_2:18633205-18633224 | Msa0761400:intron | 40.0% |
| TATGCGTCAAAATGTCGGAA+TGG | - | chr5_2:18633385-18633404 | Msa0761400:intron | 40.0% | |
| TATGACACTCAAGGCTGAAA+AGG | - | chr5_2:18633767-18633786 | Msa0761400:CDS | 40.0% | |
| ATGACACTCAAGGCTGAAAA+GGG | - | chr5_2:18633768-18633787 | Msa0761400:CDS | 40.0% | |
| GATCACCAATGCAAAAAGTC+AGG | - | chr5_2:18633799-18633818 | Msa0761400:CDS | 40.0% | |
| ! | ATGTGCCTGACTTTTTGCAT+TGG | + | chr5_2:18633807-18633826 | None:intergenic | 40.0% |
| TGTATGAGACTGTACAAACG+AGG | - | chr5_2:18633898-18633917 | Msa0761400:intron | 40.0% | |
| TTGCGGTGTATTCACATTCA+CGG | + | chr5_2:18633998-18634017 | None:intergenic | 40.0% | |
| TCACTATTGTTTGGGTCTTG+CGG | + | chr5_2:18634015-18634034 | None:intergenic | 40.0% | |
| ! | TGTGTGGAAGTTGATCATCA+AGG | - | chr5_2:18634108-18634127 | Msa0761400:intron | 40.0% |
| TCAGAGGTTGTTTATCCTCA+AGG | - | chr5_2:18635030-18635049 | Msa0761400:intron | 40.0% | |
| CCTTCTCAATAGTATCCTTG+AGG | + | chr5_2:18635048-18635067 | None:intergenic | 40.0% | |
| CCTCAAGGATACTATTGAGA+AGG | - | chr5_2:18635045-18635064 | Msa0761400:intron | 40.0% | |
| TCATCTTCAGTCTCAGACTT+TGG | + | chr5_2:18635094-18635113 | None:intergenic | 40.0% | |
| ATCAAAAACGGGATCACGAA+CGG | + | chr5_2:18635155-18635174 | None:intergenic | 40.0% | |
| ACGCTTCTCTCGATCAAAAA+CGG | + | chr5_2:18635167-18635186 | None:intergenic | 40.0% | |
| TGAACGTAGGAAGAATGAAG+TGG | - | chr5_2:18635214-18635233 | Msa0761400:intron | 40.0% | |
| GAACCAATGAAGATCTTTGG+TGG | - | chr5_2:18635385-18635404 | Msa0761400:intron | 40.0% | |
| CTACCACCAAAGATCTTCAT+TGG | + | chr5_2:18635391-18635410 | None:intergenic | 40.0% | |
| ! | CAATGAAGATCTTTGGTGGT+AGG | - | chr5_2:18635389-18635408 | Msa0761400:intron | 40.0% |
| TTTGTCAGTGATGAGCTTTG+TGG | - | chr5_2:18635546-18635565 | Msa0761400:CDS | 40.0% | |
| !! | AACAGTGATTAGCTCTGACT+TGG | - | chr5_2:18635629-18635648 | Msa0761400:exon | 40.0% |
| AGCTCTTCATGTTCCAGTTG+AGG | + | chr5_2:18631237-18631256 | None:intergenic | 45.0% | |
| ! | GAAGGTGGTGGTGATGTTTA+AGG | + | chr5_2:18631278-18631297 | None:intergenic | 45.0% |
| ATTGAAAGGGAAGAAGGTGG+TGG | + | chr5_2:18631290-18631309 | None:intergenic | 45.0% | |
| !! | ATGGAAGCACTACTAGCTTG+TGG | + | chr5_2:18632151-18632170 | None:intergenic | 45.0% |
| AAAACCAAGCAAGTGCCTAG+AGG | + | chr5_2:18632710-18632729 | None:intergenic | 45.0% | |
| CTGCAATAAGAGAGAGGTAG+CGG | + | chr5_2:18632891-18632910 | None:intergenic | 45.0% | |
| GCGATCCCTGTTCAACAAAT+AGG | + | chr5_2:18633005-18633024 | None:intergenic | 45.0% | |
| TTTGTTGAACAGGGATCGCT+AGG | - | chr5_2:18633006-18633025 | Msa0761400:intron | 45.0% | |
| GCTAAATGCTTATCTGCCGT+CGG | - | chr5_2:18633035-18633054 | Msa0761400:intron | 45.0% | |
| TTACAAGCGACATCGATGGA+AGG | + | chr5_2:18633137-18633156 | None:intergenic | 45.0% | |
| !! | TGTCGGAATGGTCTTGTTGA+TGG | - | chr5_2:18633397-18633416 | Msa0761400:intron | 45.0% |
| ACTCAAGGCTGAAAAGGGAA+GGG | - | chr5_2:18633773-18633792 | Msa0761400:CDS | 45.0% | |
| CAAAAAGTCAGGCACATGAG+TGG | - | chr5_2:18633810-18633829 | Msa0761400:CDS | 45.0% | |
| TGCGGTGTATTCACATTCAC+GGG | + | chr5_2:18633997-18634016 | None:intergenic | 45.0% | |
| GGGTTACAGTACCACCTAAA+AGG | + | chr5_2:18634333-18634352 | None:intergenic | 45.0% | |
| !!! | CTTTTGGGGCAATAGTCCTT+AGG | + | chr5_2:18634678-18634697 | None:intergenic | 45.0% |
| TGGCTTCATGTTCATCACCA+GGG | + | chr5_2:18634777-18634796 | None:intergenic | 45.0% | |
| TTGGCTTCATGTTCATCACC+AGG | + | chr5_2:18634778-18634797 | None:intergenic | 45.0% | |
| CGCCAAAGGAACTGCATAAA+TGG | - | chr5_2:18634921-18634940 | Msa0761400:intron | 45.0% | |
| TCAAAAACGGGATCACGAAC+GGG | + | chr5_2:18635154-18635173 | None:intergenic | 45.0% | |
| CGCTTCTCTCGATCAAAAAC+GGG | + | chr5_2:18635166-18635185 | None:intergenic | 45.0% | |
| !! | TTTTGATCGAGAGAAGCGTG+AGG | - | chr5_2:18635168-18635187 | Msa0761400:intron | 45.0% |
| AGTGATTTACTCTACGCCAG+CGG | - | chr5_2:18635427-18635446 | Msa0761400:intron | 45.0% | |
| TTTGTGGCCTATCATGACCT+TGG | - | chr5_2:18635562-18635581 | Msa0761400:CDS | 45.0% | |
| GAGTTCACCAAGGTCATGAT+AGG | + | chr5_2:18635572-18635591 | None:intergenic | 45.0% | |
| !! | AAAATTATAAAACAAATTAT+GGG | + | chr5_2:18632526-18632545 | None:intergenic | 5.0% |
| !! | AAAAATTATAAAACAAATTA+TGG | + | chr5_2:18632527-18632546 | None:intergenic | 5.0% |
| GGAAGGAGTGAGAAAGTTGG+TGG | + | chr5_2:18631329-18631348 | None:intergenic | 50.0% | |
| TGCTTCCATGACTCAAGTCG+AGG | - | chr5_2:18632162-18632181 | Msa0761400:CDS | 50.0% | |
| ! | TTGCTCCTCGACTTGAGTCA+TGG | + | chr5_2:18632170-18632189 | None:intergenic | 50.0% |
| TCAAGTCGAGGAGCAATCAG+AGG | - | chr5_2:18632174-18632193 | Msa0761400:CDS | 50.0% | |
| ATGCCAAGGAAGAGCTGACA+TGG | - | chr5_2:18632345-18632364 | Msa0761400:intron | 50.0% | |
| TCTCCATGTCAGCTCTTCCT+TGG | + | chr5_2:18632351-18632370 | None:intergenic | 50.0% | |
| ATTGGGGAGAAGGGTGAAGA+AGG | - | chr5_2:18632402-18632421 | Msa0761400:intron | 50.0% | |
| ATGCCATAGTTGCACGAAGG+CGG | - | chr5_2:18632842-18632861 | Msa0761400:intron | 50.0% | |
| TTTCCGCCTTCGTGCAACTA+TGG | + | chr5_2:18632848-18632867 | None:intergenic | 50.0% | |
| CGAAGGCGGAAAGATTTCAC+AGG | - | chr5_2:18632856-18632875 | Msa0761400:intron | 50.0% | |
| CACTCAAGGCTGAAAAGGGA+AGG | - | chr5_2:18633772-18633791 | Msa0761400:CDS | 50.0% | |
| ATACGCCACTCTGCCAAGAA+GGG | + | chr5_2:18633837-18633856 | None:intergenic | 50.0% | |
| GCGGTGTATTCACATTCACG+GGG | + | chr5_2:18633996-18634015 | None:intergenic | 50.0% | |
| AGACCACAAAGAGCAGCCTA+AGG | - | chr5_2:18634659-18634678 | Msa0761400:CDS | 50.0% | |
| AGTCCTTAGGCTGCTCTTTG+TGG | + | chr5_2:18634665-18634684 | None:intergenic | 50.0% | |
| GCTAAACATCATAGACCCCG+AGG | - | chr5_2:18634720-18634739 | Msa0761400:CDS | 50.0% | |
| GGCTTCATGTTCATCACCAG+GGG | + | chr5_2:18634776-18634795 | None:intergenic | 50.0% | |
| AGTTCGCTCACGCCTCATAA+TGG | - | chr5_2:18635463-18635482 | Msa0761400:intron | 50.0% | |
| TGGATTACGGGAGTTCACCA+AGG | + | chr5_2:18635582-18635601 | None:intergenic | 50.0% | |
| CTAGCCTCTAGGCACTTGCT+TGG | - | chr5_2:18632703-18632722 | Msa0761400:intron | 55.0% | |
| TGCAGACACTTACGACAGCC+TGG | - | chr5_2:18632906-18632925 | Msa0761400:intron | 55.0% | |
| GACAGCCTGGATGATCGTGA+TGG | - | chr5_2:18632919-18632938 | Msa0761400:intron | 55.0% | |
| TGAACAGGGATCGCTAGGCT+AGG | - | chr5_2:18633011-18633030 | Msa0761400:intron | 55.0% | |
| GGAGACGTTAGATGCTGCAC+AGG | - | chr5_2:18633085-18633104 | Msa0761400:intron | 55.0% | |
| TACGCCACTCTGCCAAGAAG+GGG | + | chr5_2:18633836-18633855 | None:intergenic | 55.0% | |
| CATACGCCACTCTGCCAAGA+AGG | + | chr5_2:18633838-18633857 | None:intergenic | 55.0% | |
| AAGGCAGAGAATCGCTCCTC+GGG | + | chr5_2:18634739-18634758 | None:intergenic | 55.0% | |
| CAAGGCAGAGAATCGCTCCT+CGG | + | chr5_2:18634740-18634759 | None:intergenic | 55.0% | |
| AGGGGAGAAAGCTGTTGCCA+AGG | + | chr5_2:18634758-18634777 | None:intergenic | 55.0% | |
| TTGGCAACAGCTTTCTCCCC+TGG | - | chr5_2:18634757-18634776 | Msa0761400:intron | 55.0% | |
| GATTTACTCTACGCCAGCGG+AGG | - | chr5_2:18635430-18635449 | Msa0761400:intron | 55.0% | |
| ACTCCTTAACCAACCTCCGC+TGG | + | chr5_2:18635446-18635465 | None:intergenic | 55.0% | |
| GTTGAGTCCGCGCCATTATG+AGG | + | chr5_2:18635478-18635497 | None:intergenic | 55.0% | |
| AACTCCCACTGCTGGCATGA+GGG | - | chr5_2:18635495-18635514 | Msa0761400:CDS | 55.0% | |
| GCACATGAGTGGCCCCTTCT+TGG | - | chr5_2:18633821-18633840 | Msa0761400:CDS | 60.0% | |
| AGGCAGAGAATCGCTCCTCG+GGG | + | chr5_2:18634738-18634757 | None:intergenic | 60.0% | |
| CGAGGAGCGATTCTCTGCCT+TGG | - | chr5_2:18634738-18634757 | Msa0761400:intron | 60.0% | |
| TACTCTACGCCAGCGGAGGT+TGG | - | chr5_2:18635434-18635453 | Msa0761400:intron | 60.0% | |
| ! | ACGCCAGCGGAGGTTGGTTA+AGG | - | chr5_2:18635440-18635459 | Msa0761400:intron | 60.0% |
| GCTCACGCCTCATAATGGCG+CGG | - | chr5_2:18635468-18635487 | Msa0761400:intron | 60.0% | |
| CAACTCCCACTGCTGGCATG+AGG | - | chr5_2:18635494-18635513 | Msa0761400:CDS | 60.0% | |
| GTGGCCCCTTCTTGGCAGAG+TGG | - | chr5_2:18633829-18633848 | Msa0761400:CDS | 65.0% | |
| GCGGACTCAACTCCCACTGC+TGG | - | chr5_2:18635487-18635506 | Msa0761400:CDS | 65.0% | |
| GCAGCCCTCATGCCAGCAGT+GGG | + | chr5_2:18635502-18635521 | None:intergenic | 65.0% | |
| TGCAGCCCTCATGCCAGCAG+TGG | + | chr5_2:18635503-18635522 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 18631185 | 18635705 | 18631185 | ID=Msa0761400;Name=Msa0761400 |
| chr5_2 | mRNA | 18631185 | 18635705 | 18631185 | ID=Msa0761400-mRNA-1;Parent=Msa0761400;Name=Msa0761400-mRNA-1;_AED=0.02;_eAED=0.02;_QI=62|1|1|1|1|1|6|570|422 |
| chr5_2 | exon | 18631185 | 18631971 | 18631185 | ID=Msa0761400-mRNA-1:exon:8064;Parent=Msa0761400-mRNA-1 |
| chr5_2 | exon | 18632072 | 18632259 | 18632072 | ID=Msa0761400-mRNA-1:exon:8063;Parent=Msa0761400-mRNA-1 |
| chr5_2 | exon | 18633628 | 18633872 | 18633628 | ID=Msa0761400-mRNA-1:exon:8062;Parent=Msa0761400-mRNA-1 |
| chr5_2 | exon | 18633950 | 18634115 | 18633950 | ID=Msa0761400-mRNA-1:exon:8061;Parent=Msa0761400-mRNA-1 |
| chr5_2 | exon | 18634467 | 18634744 | 18634467 | ID=Msa0761400-mRNA-1:exon:8060;Parent=Msa0761400-mRNA-1 |
| chr5_2 | exon | 18635469 | 18635705 | 18635469 | ID=Msa0761400-mRNA-1:exon:8059;Parent=Msa0761400-mRNA-1 |
| chr5_2 | five_prime_UTR | 18635644 | 18635705 | 18635644 | ID=Msa0761400-mRNA-1:five_prime_utr;Parent=Msa0761400-mRNA-1 |
| chr5_2 | CDS | 18635469 | 18635643 | 18635469 | ID=Msa0761400-mRNA-1:cds;Parent=Msa0761400-mRNA-1 |
| chr5_2 | CDS | 18634467 | 18634744 | 18634467 | ID=Msa0761400-mRNA-1:cds;Parent=Msa0761400-mRNA-1 |
| chr5_2 | CDS | 18633950 | 18634115 | 18633950 | ID=Msa0761400-mRNA-1:cds;Parent=Msa0761400-mRNA-1 |
| chr5_2 | CDS | 18633628 | 18633872 | 18633628 | ID=Msa0761400-mRNA-1:cds;Parent=Msa0761400-mRNA-1 |
| chr5_2 | CDS | 18632072 | 18632259 | 18632072 | ID=Msa0761400-mRNA-1:cds;Parent=Msa0761400-mRNA-1 |
| chr5_2 | CDS | 18631755 | 18631971 | 18631755 | ID=Msa0761400-mRNA-1:cds;Parent=Msa0761400-mRNA-1 |
| chr5_2 | three_prime_UTR | 18631185 | 18631754 | 18631185 | ID=Msa0761400-mRNA-1:three_prime_utr;Parent=Msa0761400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
