Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0763470 | sp|Q6NKP9|AMSH2_ARATH | 71.556 | 225 | 60 | 3 | 12 | 235 | 2 | 223 | 1.97e-110 | 319 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0763470 | G7K1D2 | 96.596 | 235 | 8 | 0 | 1 | 235 | 1 | 235 | 6.81e-170 | 476 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0763470 | Msa0842970 | 0.885214 | 9.857686e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0763470 | MtrunA17_Chr5g0413531 | 96.596 | 235 | 8 | 0 | 1 | 235 | 1 | 235 | 1.31e-173 | 476 |
| Msa0763470 | MtrunA17_Chr6g0484221 | 60.000 | 175 | 70 | 0 | 61 | 235 | 339 | 513 | 4.44e-81 | 251 |
| Msa0763470 | MtrunA17_Chr4g0068071 | 50.893 | 224 | 109 | 1 | 12 | 235 | 285 | 507 | 4.71e-80 | 248 |
| Msa0763470 | MtrunA17_Chr8g0391111 | 60.000 | 175 | 70 | 0 | 61 | 235 | 338 | 512 | 8.33e-72 | 227 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0763470 | AT1G10600.4 | 71.556 | 225 | 60 | 3 | 12 | 235 | 2 | 223 | 2.00e-111 | 319 |
| Msa0763470 | AT1G10600.1 | 71.556 | 225 | 60 | 3 | 12 | 235 | 2 | 223 | 2.00e-111 | 319 |
| Msa0763470 | AT1G10600.3 | 71.111 | 225 | 60 | 4 | 12 | 235 | 2 | 222 | 1.45e-108 | 312 |
| Msa0763470 | AT1G48790.1 | 56.989 | 186 | 80 | 0 | 50 | 235 | 322 | 507 | 1.52e-78 | 245 |
| Msa0763470 | AT1G10600.2 | 79.339 | 121 | 25 | 0 | 115 | 235 | 46 | 166 | 5.67e-73 | 219 |
| Msa0763470 | AT4G16144.1 | 50.000 | 68 | 34 | 0 | 55 | 122 | 327 | 394 | 4.98e-17 | 79.7 |
Find 93 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATAAATTGAAAGTTTA+AGG | 0.034458 | 5_2:-22696143 | Msa0763470:three_prime_UTR |
| AACATTTGATTTAATGTAAT+TGG | 0.155597 | 5_2:-22696178 | Msa0763470:three_prime_UTR |
| AAAGATTTCAAACCTTAAAT+TGG | 0.208091 | 5_2:+22696456 | None:intergenic |
| AGTAAAATCAGTTTATATTA+TGG | 0.208389 | 5_2:-22698863 | Msa0763470:exon |
| GCGAGGACTTGGTTACTTTA+TGG | 0.241212 | 5_2:+22698818 | None:intergenic |
| GGTTACTTTATGGTCTAAAA+AGG | 0.243770 | 5_2:+22698828 | None:intergenic |
| TTTCCAGTCAATGCGGTTAA+TGG | 0.255071 | 5_2:-22698359 | Msa0763470:intron |
| TACACAGGGTTGCCATTATC+TGG | 0.318032 | 5_2:+22696508 | None:intergenic |
| GGATCCATCCAACAGGATAA+AGG | 0.336304 | 5_2:+22697431 | None:intergenic |
| TTAGATGCCGATTCCTGCTT+TGG | 0.347374 | 5_2:+22697630 | None:intergenic |
| GTCAAATGGCGAATACATAT+TGG | 0.365417 | 5_2:+22696295 | None:intergenic |
| GAAAACTTCCTCCTCATTTG+TGG | 0.403748 | 5_2:+22697474 | None:intergenic |
| CTTTGAATGAACCTGCCTTA+AGG | 0.408223 | 5_2:+22700531 | None:intergenic |
| AGATTCGTTATCTGAATTTG+TGG | 0.428102 | 5_2:+22698711 | None:intergenic |
| ACTTTATTTCTCACAACAAA+AGG | 0.428473 | 5_2:-22700473 | Msa0763470:five_prime_UTR |
| AGAAAATACAGAAAAGGATC+TGG | 0.430299 | 5_2:-22698314 | Msa0763470:CDS |
| GACTACTCAAACCTCGTCAT+TGG | 0.431880 | 5_2:+22698914 | None:intergenic |
| GATCCATCCAACAGGATAAA+GGG | 0.433194 | 5_2:+22697432 | None:intergenic |
| TAGTCGTTGCTGGTTACAAC+TGG | 0.433888 | 5_2:-22698896 | Msa0763470:five_prime_UTR |
| TGAGGCATTTGCGATTGTAT+TGG | 0.440709 | 5_2:-22696896 | Msa0763470:CDS |
| TGCAGGGGAAGGCGAGGACT+TGG | 0.440859 | 5_2:+22698807 | None:intergenic |
| GAGGTTTGAGTAGTCGTTGC+TGG | 0.442818 | 5_2:-22698906 | Msa0763470:five_prime_UTR |
| CCACACAAAGAACCAGATAA+TGG | 0.451587 | 5_2:-22696520 | Msa0763470:CDS |
| TAAAATGATTCTTACAAGAA+AGG | 0.457601 | 5_2:+22698270 | None:intergenic |
| GGAGTCCCGCATGTGTCTTT+CGG | 0.464151 | 5_2:-22700570 | Msa0763470:five_prime_UTR |
| TGATTAGTGTGGTCATATAG+AGG | 0.468432 | 5_2:+22697655 | None:intergenic |
| TCAAAGTTGTTTCATGTCAT+CGG | 0.468592 | 5_2:-22697224 | Msa0763470:CDS |
| CTGGAAACATGTGGTATACT+TGG | 0.475749 | 5_2:-22698295 | Msa0763470:CDS |
| ATTTGACCATGAAAACAAAC+AGG | 0.475763 | 5_2:-22696279 | Msa0763470:three_prime_UTR |
| GTCGTTGATAAGGAAGCAGC+TGG | 0.478810 | 5_2:-22698949 | Msa0763470:five_prime_UTR |
| CCATACCATCCGGTTCAGTT+AGG | 0.480057 | 5_2:+22696578 | None:intergenic |
| CCATTATCTGGTTCTTTGTG+TGG | 0.489841 | 5_2:+22696520 | None:intergenic |
| GTGAAATGACACGATCCTTA+AGG | 0.490351 | 5_2:-22700546 | Msa0763470:five_prime_UTR |
| CCTAACTGAACCGGATGGTA+TGG | 0.490716 | 5_2:-22696578 | Msa0763470:CDS |
| CAAAAGGCTTCTACATATCA+AGG | 0.490821 | 5_2:-22700457 | Msa0763470:intron |
| TCTCTTTCGCCTAACTGAAC+CGG | 0.490907 | 5_2:-22696587 | Msa0763470:CDS |
| TGCTAAAGAAAATACAGAAA+AGG | 0.496176 | 5_2:-22698320 | Msa0763470:CDS |
| GAAAGATCCCTTTATCCTGT+TGG | 0.497748 | 5_2:-22697439 | Msa0763470:CDS |
| GATCCCTTTATCCTGTTGGA+TGG | 0.503825 | 5_2:-22697435 | Msa0763470:CDS |
| GGCTCCACACAACACAGTGC+AGG | 0.506857 | 5_2:+22698790 | None:intergenic |
| GGATATTCTAAGAAGTTGTC+CGG | 0.509177 | 5_2:-22696557 | Msa0763470:CDS |
| TCTAAGAAGTTGTCCGGAGA+GGG | 0.513245 | 5_2:-22696551 | Msa0763470:CDS |
| TTGGAGCAGTGCTCGTACAC+AGG | 0.513599 | 5_2:+22696493 | None:intergenic |
| AATCATACCAAAGCAGGAAT+CGG | 0.516666 | 5_2:-22697637 | Msa0763470:CDS |
| AGATCTTCTATATCGACAAA+TGG | 0.520924 | 5_2:+22696346 | None:intergenic |
| CACACTAATCATACCAAAGC+AGG | 0.522849 | 5_2:-22697643 | Msa0763470:CDS |
| TTTGATTTAATGTAATTGGA+TGG | 0.525167 | 5_2:-22696174 | Msa0763470:three_prime_UTR |
| CTTTCAATTATCCAGGAGAA+GGG | 0.528394 | 5_2:-22697681 | Msa0763470:intron |
| ATCTTTGATTTACGCTAACA+AGG | 0.528433 | 5_2:-22696439 | Msa0763470:exon |
| GATGCAGAGAGTCGTTGATA+AGG | 0.529253 | 5_2:-22698959 | Msa0763470:intron |
| AATACAATCGCAAATGCCTC+AGG | 0.530998 | 5_2:+22696898 | None:intergenic |
| GCTCCACACAACACAGTGCA+GGG | 0.532225 | 5_2:+22698791 | None:intergenic |
| CTTAAGGCAGGTTCATTCAA+AGG | 0.536756 | 5_2:-22700530 | Msa0763470:five_prime_UTR |
| TTTGTCGATATAGAAGATCT+AGG | 0.536954 | 5_2:-22696343 | Msa0763470:three_prime_UTR |
| TTCCCCTGCACTGTGTTGTG+TGG | 0.538955 | 5_2:-22698794 | Msa0763470:CDS |
| ATAGCACACATTTGTTTCCA+CGG | 0.543546 | 5_2:-22696383 | Msa0763470:three_prime_UTR |
| ATGTTCTTTCTCAGGAGCTG+TGG | 0.547637 | 5_2:-22696610 | Msa0763470:intron |
| CATACATGGATCCATCCAAC+AGG | 0.548997 | 5_2:+22697424 | None:intergenic |
| TGTGGATGAAATCCCCTCTC+CGG | 0.550246 | 5_2:+22696538 | None:intergenic |
| GCGAATACATATTGGACTCA+TGG | 0.555753 | 5_2:+22696303 | None:intergenic |
| CCAGTCAATGCGGTTAATGG+AGG | 0.564775 | 5_2:-22698356 | Msa0763470:intron |
| CTTAGAATATCCATACCATC+CGG | 0.565799 | 5_2:+22696568 | None:intergenic |
| TTATACCTTGAGGTATCAGT+TGG | 0.568198 | 5_2:+22696871 | None:intergenic |
| GACATGAAACAACTTTGAGA+AGG | 0.582373 | 5_2:+22697229 | None:intergenic |
| CTGCTTTGGTATGATTAGTG+TGG | 0.591645 | 5_2:+22697644 | None:intergenic |
| GTAACATCACTATCTCATCA+TGG | 0.593842 | 5_2:-22700591 | Msa0763470:five_prime_UTR |
| AGTTGGATCAATCACCTGGT+AGG | 0.599897 | 5_2:+22697180 | None:intergenic |
| TCACACCGAAAGACACATGC+GGG | 0.600704 | 5_2:+22700565 | None:intergenic |
| AAGTTGTTTCATGTCATCGG+TGG | 0.601407 | 5_2:-22697221 | Msa0763470:CDS |
| ATGTGTGCTATATCCATTGT+GGG | 0.602293 | 5_2:+22696395 | None:intergenic |
| GATTAGTGTGGTCATATAGA+GGG | 0.602810 | 5_2:+22697656 | None:intergenic |
| ACAGTGTAATGCCACAAATG+AGG | 0.604494 | 5_2:-22697485 | Msa0763470:intron |
| TGGAGCAGTGCTCGTACACA+GGG | 0.605100 | 5_2:+22696494 | None:intergenic |
| TTCTAAGAAGTTGTCCGGAG+AGG | 0.617336 | 5_2:-22696552 | Msa0763470:CDS |
| ACACAACACAGTGCAGGGGA+AGG | 0.620815 | 5_2:+22698796 | None:intergenic |
| ATTTCATAATTCCAATGACG+AGG | 0.623794 | 5_2:-22698925 | Msa0763470:five_prime_UTR |
| CTAAGAAGTTGTCCGGAGAG+GGG | 0.631015 | 5_2:-22696550 | Msa0763470:CDS |
| AATGACACGATCCTTAAGGC+AGG | 0.631578 | 5_2:-22700542 | Msa0763470:five_prime_UTR |
| ACATGAAACAACTTTGAGAA+GGG | 0.633287 | 5_2:+22697230 | None:intergenic |
| ACACAGTGCAGGGGAAGGCG+AGG | 0.635341 | 5_2:+22698801 | None:intergenic |
| TGGCACCAACTGATACCTCA+AGG | 0.653936 | 5_2:-22696876 | Msa0763470:intron |
| GCACACTCAATATTCCTACC+AGG | 0.654009 | 5_2:-22697194 | Msa0763470:intron |
| TACGATATGTACATCACGCA+CGG | 0.658126 | 5_2:+22698675 | None:intergenic |
| ACTGTGTTGTGTGGAGCCAG+TGG | 0.659270 | 5_2:-22698785 | Msa0763470:CDS |
| GTGTAATGCCACAAATGAGG+AGG | 0.661724 | 5_2:-22697482 | Msa0763470:CDS |
| GAAAAGGATCTGGAAACATG+TGG | 0.667652 | 5_2:-22698304 | Msa0763470:CDS |
| CAGCGCATACTGTCCCACAA+TGG | 0.672814 | 5_2:-22696408 | Msa0763470:three_prime_UTR |
| CTCCACACAACACAGTGCAG+GGG | 0.680286 | 5_2:+22698792 | None:intergenic |
| TCGTTGATAAGGAAGCAGCT+GGG | 0.685046 | 5_2:-22698948 | Msa0763470:five_prime_UTR |
| TTCACACCGAAAGACACATG+CGG | 0.685781 | 5_2:+22700564 | None:intergenic |
| TTTCGCCTAACTGAACCGGA+TGG | 0.698888 | 5_2:-22696583 | Msa0763470:CDS |
| AATGTGTGCTATATCCATTG+TGG | 0.706127 | 5_2:+22696394 | None:intergenic |
| TGGTGAGAGTCATATCACCG+TGG | 0.792814 | 5_2:+22696366 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTTTCAAATTATTAT+TGG | + | chr5_2:22696738-22696757 | None:intergenic | 10.0% |
| !! | TTGAATAAAGAATTAAAATG+AGG | - | chr5_2:22697281-22697300 | Msa0763470:intron | 15.0% |
| !! | TGAATAAAGAATTAAAATGA+GGG | - | chr5_2:22697282-22697301 | Msa0763470:intron | 15.0% |
| !! | AGTAAAATCAGTTTATATTA+TGG | - | chr5_2:22697866-22697885 | Msa0763470:intron | 15.0% |
| !!! | ACATTTTCTAAAATTATTAC+TGG | - | chr5_2:22698211-22698230 | Msa0763470:intron | 15.0% |
| !! | TGGAAAATATAAAATGAATA+CGG | + | chr5_2:22698356-22698375 | None:intergenic | 15.0% |
| !! | AAAAAATAACATAAAACTGT+TGG | + | chr5_2:22699799-22699818 | None:intergenic | 15.0% |
| !!! | AACATTTGATTTAATGTAAT+TGG | - | chr5_2:22700551-22700570 | Msa0763470:five_prime_UTR | 15.0% |
| !! | CAAAATAAATTGAAAGTTTA+AGG | - | chr5_2:22700586-22700605 | Msa0763470:five_prime_UTR | 15.0% |
| !!! | ACAAATCAGATAAATTTTAG+TGG | + | chr5_2:22696510-22696529 | None:intergenic | 20.0% |
| !!! | TTATCTGATTTGTTTAAAAG+AGG | - | chr5_2:22696517-22696536 | Msa0763470:CDS | 20.0% |
| !!! | TGAATTATGTCATTTATCAT+CGG | - | chr5_2:22697103-22697122 | Msa0763470:intron | 20.0% |
| !! | AAAAAACTGTCATATTTCAT+TGG | - | chr5_2:22697314-22697333 | Msa0763470:intron | 20.0% |
| !! | AAAATATTATATTCTTCGCA+TGG | + | chr5_2:22697718-22697737 | None:intergenic | 20.0% |
| !!! | ACACATTAATTTGTTTTGTT+TGG | - | chr5_2:22697743-22697762 | Msa0763470:intron | 20.0% |
| !!! | CACATTAATTTGTTTTGTTT+GGG | - | chr5_2:22697744-22697763 | Msa0763470:intron | 20.0% |
| !! | TAAAATGATTCTTACAAGAA+AGG | + | chr5_2:22698462-22698481 | None:intergenic | 20.0% |
| !! | TGTCATGAAAATTGTTAAAT+TGG | - | chr5_2:22698483-22698502 | Msa0763470:intron | 20.0% |
| !! | GATAAAGTTAATATCTTTCA+TGG | + | chr5_2:22698529-22698548 | None:intergenic | 20.0% |
| !! | ATGGAAAGAAAAAAAAAACT+AGG | + | chr5_2:22699332-22699351 | None:intergenic | 20.0% |
| !! | AGATAAATGCTTTATAAAGT+TGG | + | chr5_2:22699569-22699588 | None:intergenic | 20.0% |
| !!! | CAGTTTTATGTTATTTTTTC+AGG | - | chr5_2:22699800-22699819 | Msa0763470:intron | 20.0% |
| !!! | TTTTGCACAATTATGAAAAT+TGG | + | chr5_2:22699920-22699939 | None:intergenic | 20.0% |
| !! | TTTCATAATTGTGCAAAAAA+TGG | - | chr5_2:22699922-22699941 | Msa0763470:intron | 20.0% |
| !! | AAAGATTTCAAACCTTAAAT+TGG | + | chr5_2:22700276-22700295 | None:intergenic | 20.0% |
| !!! | TTTGATTTAATGTAATTGGA+TGG | - | chr5_2:22700555-22700574 | Msa0763470:five_prime_UTR | 20.0% |
| !! | ACTTTATTTCTCACAACAAA+AGG | - | chr5_2:22696256-22696275 | Msa0763470:three_prime_UTR | 25.0% |
| !!! | CTTGGAATAGTATTTTTTGA+AGG | + | chr5_2:22696320-22696339 | None:intergenic | 25.0% |
| ! | AAGTTATCTTTCAACCAATA+AGG | + | chr5_2:22696671-22696690 | None:intergenic | 25.0% |
| ! | TTCAATGTAATCATATGTGT+TGG | - | chr5_2:22696763-22696782 | Msa0763470:intron | 25.0% |
| !! | TATCTTCTTTTTCCTTTAGA+GGG | + | chr5_2:22696878-22696897 | None:intergenic | 25.0% |
| !! | TTATCTTCTTTTTCCTTTAG+AGG | + | chr5_2:22696879-22696898 | None:intergenic | 25.0% |
| ! | TATAAGACACAAATACTCTT+TGG | - | chr5_2:22696929-22696948 | Msa0763470:intron | 25.0% |
| ! | ATAAGACACAAATACTCTTT+GGG | - | chr5_2:22696930-22696949 | Msa0763470:intron | 25.0% |
| ! | TTCAATGTAATCATATGTGT+CGG | + | chr5_2:22696763-22696782 | None:intergenic | 25.0% |
| !!! | GTGATTTTAAGTTGTTTTAG+TGG | - | chr5_2:22697186-22697205 | Msa0763470:intron | 25.0% |
| !!! | AGAAAGCAGATTTTTTCATT+TGG | - | chr5_2:22697232-22697251 | Msa0763470:CDS | 25.0% |
| ! | ATACTGAAGTCAAAGAATAA+TGG | - | chr5_2:22697346-22697365 | Msa0763470:intron | 25.0% |
| !! | CACATAGATATACATTGATT+GGG | + | chr5_2:22697429-22697448 | None:intergenic | 25.0% |
| !!! | ATTAATTTGTTTTGTTTGGG+TGG | - | chr5_2:22697747-22697766 | Msa0763470:intron | 25.0% |
| !!! | TTAATTTGTTTTGTTTGGGT+GGG | - | chr5_2:22697748-22697767 | Msa0763470:intron | 25.0% |
| ! | TATGGTCTAAAAAGGATTTA+TGG | + | chr5_2:22697896-22697915 | None:intergenic | 25.0% |
| !!! | CATATTACAGCTTTTAATTC+AGG | - | chr5_2:22697987-22698006 | Msa0763470:intron | 25.0% |
| !!! | GATTTCTATAATTAGCCTTA+TGG | - | chr5_2:22698302-22698321 | Msa0763470:CDS | 25.0% |
| !! | ACGGCATAAATAATTTTCAA+GGG | + | chr5_2:22698337-22698356 | None:intergenic | 25.0% |
| !! | TACGGCATAAATAATTTTCA+AGG | + | chr5_2:22698338-22698357 | None:intergenic | 25.0% |
| !! | TTTATATTTTCCAGTCAATG+CGG | - | chr5_2:22698363-22698382 | Msa0763470:intron | 25.0% |
| !! | TATTTTCTTTAGCAAGATCA+AGG | + | chr5_2:22698403-22698422 | None:intergenic | 25.0% |
| ! | TGCTAAAGAAAATACAGAAA+AGG | - | chr5_2:22698409-22698428 | Msa0763470:intron | 25.0% |
| ! | ATATTAACTTTATCCATCCA+TGG | - | chr5_2:22698535-22698554 | Msa0763470:intron | 25.0% |
| !! | TTTTTCCAAAAGCTAAACTT+TGG | + | chr5_2:22698883-22698902 | None:intergenic | 25.0% |
| !!! | TTTAGCTTTTGGAAAAATCA+TGG | - | chr5_2:22698886-22698905 | Msa0763470:five_prime_UTR | 25.0% |
| !! | TTGCAAACTTACATTCTTTT+TGG | - | chr5_2:22699139-22699158 | Msa0763470:intron | 25.0% |
| !! | AACTTACATTCTTTTTGGAT+TGG | - | chr5_2:22699144-22699163 | Msa0763470:intron | 25.0% |
| !!! | TTTTAGCACATGTTTTTAAC+AGG | - | chr5_2:22699177-22699196 | Msa0763470:intron | 25.0% |
| !!! | TTTAGCACATGTTTTTAACA+GGG | - | chr5_2:22699178-22699197 | Msa0763470:intron | 25.0% |
| ! | AAAAAAAACTAGGACATACA+TGG | + | chr5_2:22699322-22699341 | None:intergenic | 25.0% |
| ! | ACTACTAACTAATTTAACCA+TGG | + | chr5_2:22699675-22699694 | None:intergenic | 25.0% |
| !! | TAGTAGTTGATATCTTCAAA+GGG | - | chr5_2:22699691-22699710 | Msa0763470:intron | 25.0% |
| ! | TTCAAAGGGAATTCATAAAT+AGG | - | chr5_2:22699705-22699724 | Msa0763470:intron | 25.0% |
| !!! | TTACCATAGCATTTTGAAAT+AGG | + | chr5_2:22700046-22700065 | None:intergenic | 25.0% |
| ! | TGTACAAAAACTCCAATTTA+AGG | - | chr5_2:22700261-22700280 | Msa0763470:intron | 25.0% |
| !!! | GTATTTTTTGAAGGAAGACT+TGG | + | chr5_2:22696311-22696330 | None:intergenic | 30.0% |
| CTATTCCAAGTCTATCTTAT+AGG | - | chr5_2:22696330-22696349 | Msa0763470:three_prime_UTR | 30.0% | |
| ATACTCCTATAAGATAGACT+TGG | + | chr5_2:22696338-22696357 | None:intergenic | 30.0% | |
| TTGAATTCTGTTGTTCATGA+AGG | - | chr5_2:22696452-22696471 | Msa0763470:CDS | 30.0% | |
| !!! | CATTAGCCTTTTGAATATCA+GGG | + | chr5_2:22696604-22696623 | None:intergenic | 30.0% |
| !!! | TCATTAGCCTTTTGAATATC+AGG | + | chr5_2:22696605-22696624 | None:intergenic | 30.0% |
| AACATGAACATGTTCCTTAT+TGG | - | chr5_2:22696654-22696673 | Msa0763470:intron | 30.0% | |
| ATTGGTTGAAAGATAACTTG+TGG | - | chr5_2:22696672-22696691 | Msa0763470:intron | 30.0% | |
| !! | ATCTTCTTTTTCCTTTAGAG+GGG | + | chr5_2:22696877-22696896 | None:intergenic | 30.0% |
| TGTTATCTACAGAGATCAAA+GGG | + | chr5_2:22696909-22696928 | None:intergenic | 30.0% | |
| ATGTTATCTACAGAGATCAA+AGG | + | chr5_2:22696910-22696929 | None:intergenic | 30.0% | |
| TTCAATGTAAGCATATGTGT+CGG | + | chr5_2:22697087-22697106 | None:intergenic | 30.0% | |
| !!! | TTTTAAGTTGTTTTAGTGGC+AGG | - | chr5_2:22697190-22697209 | Msa0763470:intron | 30.0% |
| !! | TTTGATTTTGTTCAGTATCG+AGG | + | chr5_2:22697406-22697425 | None:intergenic | 30.0% |
| GCACATAGATATACATTGAT+TGG | + | chr5_2:22697430-22697449 | None:intergenic | 30.0% | |
| ! | GTGAATCAGTATGTTTTGTA+TGG | + | chr5_2:22697673-22697692 | None:intergenic | 30.0% |
| ATTTCATAATTCCAATGACG+AGG | - | chr5_2:22697804-22697823 | Msa0763470:intron | 30.0% | |
| ! | GGTTACTTTATGGTCTAAAA+AGG | + | chr5_2:22697904-22697923 | None:intergenic | 30.0% |
| AGATTCGTTATCTGAATTTG+TGG | + | chr5_2:22698021-22698040 | None:intergenic | 30.0% | |
| ! | ATAGGTTTTACAACACTGTT+GGG | - | chr5_2:22698278-22698297 | Msa0763470:intron | 30.0% |
| !! | TTCTATAATTAGCCTTATGG+AGG | - | chr5_2:22698305-22698324 | Msa0763470:CDS | 30.0% |
| !! | TAAATAATTTTCAAGGGCAG+TGG | + | chr5_2:22698331-22698350 | None:intergenic | 30.0% |
| AGAAAATACAGAAAAGGATC+TGG | - | chr5_2:22698415-22698434 | Msa0763470:intron | 30.0% | |
| ! | AAGAGTACATACATAAGAGA+GGG | + | chr5_2:22698687-22698706 | None:intergenic | 30.0% |
| TGATGAGTTTAACGAAATCA+TGG | - | chr5_2:22698833-22698852 | Msa0763470:CDS | 30.0% | |
| TAGATATAAGTCAAACCAGT+AGG | + | chr5_2:22699447-22699466 | None:intergenic | 30.0% | |
| CAAATGTTTAGAAAAGCGAA+TGG | + | chr5_2:22699471-22699490 | None:intergenic | 30.0% | |
| ! | ACATGAAACAACTTTGAGAA+GGG | + | chr5_2:22699502-22699521 | None:intergenic | 30.0% |
| ! | TCAAAGTTGTTTCATGTCAT+CGG | - | chr5_2:22699505-22699524 | Msa0763470:intron | 30.0% |
| ! | GTAGTAGTTGATATCTTCAA+AGG | - | chr5_2:22699690-22699709 | Msa0763470:intron | 30.0% |
| ATCAACCTAACGATTAAAAC+TGG | - | chr5_2:22699761-22699780 | Msa0763470:intron | 30.0% | |
| !! | TTATGCCAGTTTTAATCGTT+AGG | + | chr5_2:22699769-22699788 | None:intergenic | 30.0% |
| AAGACAAGTATTATACCTTG+AGG | + | chr5_2:22699871-22699890 | None:intergenic | 30.0% | |
| ATCTAGAGGAAAATATAAGC+AGG | + | chr5_2:22699976-22699995 | None:intergenic | 30.0% | |
| ! | TTTGAAATAGGCTTAAACTG+TGG | + | chr5_2:22700034-22700053 | None:intergenic | 30.0% |
| AAGCCTATTTCAAAATGCTA+TGG | - | chr5_2:22700040-22700059 | Msa0763470:intron | 30.0% | |
| ! | ATTGGAGTTTTTGTACACAT+TGG | + | chr5_2:22700258-22700277 | None:intergenic | 30.0% |
| ! | ATCTTTGATTTACGCTAACA+AGG | - | chr5_2:22700290-22700309 | Msa0763470:intron | 30.0% |
| AGATCTTCTATATCGACAAA+TGG | + | chr5_2:22700386-22700405 | None:intergenic | 30.0% | |
| TTTGTCGATATAGAAGATCT+AGG | - | chr5_2:22700386-22700405 | Msa0763470:intron | 30.0% | |
| !! | TGTTTGTTTTCATGGTCAAA+TGG | + | chr5_2:22700451-22700470 | None:intergenic | 30.0% |
| ATTTGACCATGAAAACAAAC+AGG | - | chr5_2:22700450-22700469 | Msa0763470:intron | 30.0% | |
| GTAACATCACTATCTCATCA+TGG | - | chr5_2:22696138-22696157 | Msa0763470:three_prime_UTR | 35.0% | |
| CAAAAGGCTTCTACATATCA+AGG | - | chr5_2:22696272-22696291 | Msa0763470:three_prime_UTR | 35.0% | |
| ! | CTTTTAGCAATACAACTTGG+GGG | + | chr5_2:22696377-22696396 | None:intergenic | 35.0% |
| ! | CCTTTTAGCAATACAACTTG+GGG | + | chr5_2:22696378-22696397 | None:intergenic | 35.0% |
| ! | CCCTTTTAGCAATACAACTT+GGG | + | chr5_2:22696379-22696398 | None:intergenic | 35.0% |
| CCCAAGTTGTATTGCTAAAA+GGG | - | chr5_2:22696376-22696395 | Msa0763470:three_prime_UTR | 35.0% | |
| ! | ACCCTTTTAGCAATACAACT+TGG | + | chr5_2:22696380-22696399 | None:intergenic | 35.0% |
| AAGTTGTATTGCTAAAAGGG+TGG | - | chr5_2:22696379-22696398 | Msa0763470:three_prime_UTR | 35.0% | |
| CTTGTAGCAAGCAATGAAAT+TGG | - | chr5_2:22696414-22696433 | Msa0763470:three_prime_UTR | 35.0% | |
| GAAGGAATTATTCCTTGACT+AGG | - | chr5_2:22696470-22696489 | Msa0763470:CDS | 35.0% | |
| ATTCTCGTTTAACCTAGTCA+AGG | + | chr5_2:22696485-22696504 | None:intergenic | 35.0% | |
| GTTTAAAAGAGGTTTCTCTC+AGG | - | chr5_2:22696528-22696547 | Msa0763470:CDS | 35.0% | |
| TGATTGCCCTGATATTCAAA+AGG | - | chr5_2:22696595-22696614 | Msa0763470:CDS | 35.0% | |
| TGTGGTTCATCTATGATTCA+CGG | - | chr5_2:22696690-22696709 | Msa0763470:intron | 35.0% | |
| TATGAAACACAGACACTTCT+CGG | + | chr5_2:22696837-22696856 | None:intergenic | 35.0% | |
| ! | ACACAAATACTCTTTGGGTT+AGG | - | chr5_2:22696935-22696954 | Msa0763470:intron | 35.0% |
| ATGAAGCACAAACTAAGACA+CGG | + | chr5_2:22697153-22697172 | None:intergenic | 35.0% | |
| ! | TTTTGTTCATCTTGATCCAC+TGG | + | chr5_2:22697963-22697982 | None:intergenic | 35.0% |
| !! | ACAGCTTTTAATTCAGGAGA+TGG | - | chr5_2:22697993-22698012 | Msa0763470:intron | 35.0% |
| TTTAATGTAATCACACGTGC+CGG | + | chr5_2:22698186-22698205 | None:intergenic | 35.0% | |
| ! | CATAGGTTTTACAACACTGT+TGG | - | chr5_2:22698277-22698296 | Msa0763470:intron | 35.0% |
| ! | GTTTTGTGATCATAATGCCA+TGG | + | chr5_2:22698555-22698574 | None:intergenic | 35.0% |
| ! | ATTGCAACAAAGATTAGCTG+AGG | + | chr5_2:22698644-22698663 | None:intergenic | 35.0% |
| ! | CAAGAGTACATACATAAGAG+AGG | + | chr5_2:22698688-22698707 | None:intergenic | 35.0% |
| ATAGAGATTCAGCACATGTT+TGG | - | chr5_2:22698805-22698824 | Msa0763470:CDS | 35.0% | |
| TGAGTTTAACGAAATCATGG+TGG | - | chr5_2:22698836-22698855 | Msa0763470:CDS | 35.0% | |
| !!! | AAGCTCCAAAGTTTAGCTTT+TGG | - | chr5_2:22698875-22698894 | Msa0763470:five_prime_UTR | 35.0% |
| ! | TCTTTCGCTGTCTTCTTTTA+TGG | - | chr5_2:22698960-22698979 | Msa0763470:intron | 35.0% |
| GACTTGTCTTTCAATTATCC+AGG | - | chr5_2:22699041-22699060 | Msa0763470:intron | 35.0% | |
| TCTTTCAATTATCCAGGAGA+AGG | - | chr5_2:22699047-22699066 | Msa0763470:intron | 35.0% | |
| CTTTCAATTATCCAGGAGAA+GGG | - | chr5_2:22699048-22699067 | Msa0763470:intron | 35.0% | |
| GATTAGTGTGGTCATATAGA+GGG | + | chr5_2:22699076-22699095 | None:intergenic | 35.0% | |
| TGATTAGTGTGGTCATATAG+AGG | + | chr5_2:22699077-22699096 | None:intergenic | 35.0% | |
| AATCATACCAAAGCAGGAAT+CGG | - | chr5_2:22699092-22699111 | Msa0763470:intron | 35.0% | |
| CTTTCCATATTGCAAGTCTT+AGG | - | chr5_2:22699344-22699363 | Msa0763470:intron | 35.0% | |
| ! | AGCTCACACTGATTAACATA+GGG | + | chr5_2:22699410-22699429 | None:intergenic | 35.0% |
| ! | AAGCTCACACTGATTAACAT+AGG | + | chr5_2:22699411-22699430 | None:intergenic | 35.0% |
| TTAGCAATAGTAGTTCCTAC+TGG | - | chr5_2:22699429-22699448 | Msa0763470:intron | 35.0% | |
| ! | GACATGAAACAACTTTGAGA+AGG | + | chr5_2:22699503-22699522 | None:intergenic | 35.0% |
| ATAAAGTTGGATCAATCACC+TGG | + | chr5_2:22699556-22699575 | None:intergenic | 35.0% | |
| !! | ACTGATGAAGTTGATGATAG+TGG | + | chr5_2:22699595-22699614 | None:intergenic | 35.0% |
| CAGAATTCTTATTGACACCA+TGG | - | chr5_2:22699655-22699674 | Msa0763470:intron | 35.0% | |
| ! | TTATACCTTGAGGTATCAGT+TGG | + | chr5_2:22699861-22699880 | None:intergenic | 35.0% |
| TACTTAGCATCTACATCTAG+AGG | + | chr5_2:22699990-22700009 | None:intergenic | 35.0% | |
| CTAGTTGTATGTTCTTTCTC+AGG | - | chr5_2:22700111-22700130 | Msa0763470:intron | 35.0% | |
| CTTAGAATATCCATACCATC+CGG | + | chr5_2:22700164-22700183 | None:intergenic | 35.0% | |
| ! | GGATATTCTAAGAAGTTGTC+CGG | - | chr5_2:22700172-22700191 | Msa0763470:intron | 35.0% |
| ATGTGTGCTATATCCATTGT+GGG | + | chr5_2:22700337-22700356 | None:intergenic | 35.0% | |
| AATGTGTGCTATATCCATTG+TGG | + | chr5_2:22700338-22700357 | None:intergenic | 35.0% | |
| ATAGCACACATTTGTTTCCA+CGG | - | chr5_2:22700346-22700365 | Msa0763470:intron | 35.0% | |
| GTCAAATGGCGAATACATAT+TGG | + | chr5_2:22700437-22700456 | None:intergenic | 35.0% | |
| !! | AACAAGCCTGTTTGTTTTCA+TGG | + | chr5_2:22700459-22700478 | None:intergenic | 35.0% |
| GTGAAATGACACGATCCTTA+AGG | - | chr5_2:22696183-22696202 | Msa0763470:three_prime_UTR | 40.0% | |
| CTTTGAATGAACCTGCCTTA+AGG | + | chr5_2:22696201-22696220 | None:intergenic | 40.0% | |
| CTTAAGGCAGGTTCATTCAA+AGG | - | chr5_2:22696199-22696218 | Msa0763470:three_prime_UTR | 40.0% | |
| CCCCAAGTTGTATTGCTAAA+AGG | - | chr5_2:22696375-22696394 | Msa0763470:three_prime_UTR | 40.0% | |
| ! | ATGAAATTGGTGCTCTTCTG+TGG | - | chr5_2:22696427-22696446 | Msa0763470:exon | 40.0% |
| ! | TGAAATTGGTGCTCTTCTGT+GGG | - | chr5_2:22696428-22696447 | Msa0763470:exon | 40.0% |
| TCATCTATGATTCACGGACA+CGG | - | chr5_2:22696696-22696715 | Msa0763470:intron | 40.0% | |
| !! | TCTTTTTCCTTTAGAGGGGT+GGG | + | chr5_2:22696873-22696892 | None:intergenic | 40.0% |
| !! | TTCTTTTTCCTTTAGAGGGG+TGG | + | chr5_2:22696874-22696893 | None:intergenic | 40.0% |
| !! | CATATGTGTCGGTGTTGTAT+TGG | + | chr5_2:22696996-22697015 | None:intergenic | 40.0% |
| TGAAGCACAAACTAAGACAC+GGG | + | chr5_2:22697152-22697171 | None:intergenic | 40.0% | |
| TTCACGCGACTCATCATAAA+TGG | + | chr5_2:22697480-22697499 | None:intergenic | 40.0% | |
| CAGTTAGCTGCACAAAGTTT+AGG | + | chr5_2:22697515-22697534 | None:intergenic | 40.0% | |
| TACGATATGTACATCACGCA+CGG | + | chr5_2:22698057-22698076 | None:intergenic | 40.0% | |
| TGTGTTCAGACATGCAATAG+TGG | + | chr5_2:22698084-22698103 | None:intergenic | 40.0% | |
| ! | GCACTGACAATTCAGATTGA+AGG | - | chr5_2:22698149-22698168 | Msa0763470:intron | 40.0% |
| TTTCCAGTCAATGCGGTTAA+TGG | - | chr5_2:22698370-22698389 | Msa0763470:intron | 40.0% | |
| GAAAAGGATCTGGAAACATG+TGG | - | chr5_2:22698425-22698444 | Msa0763470:intron | 40.0% | |
| CTGGAAACATGTGGTATACT+TGG | - | chr5_2:22698434-22698453 | Msa0763470:intron | 40.0% | |
| !! | TAAATTGGCTTGTGTGCTGA+AGG | - | chr5_2:22698498-22698517 | Msa0763470:intron | 40.0% |
| TGTGATCATAATGCCATGGA+TGG | + | chr5_2:22698551-22698570 | None:intergenic | 40.0% | |
| CTACTTCATTTGATGCTGCT+AGG | - | chr5_2:22698723-22698742 | Msa0763470:CDS | 40.0% | |
| !! | GTTTTGATCGATGGCAAGAT+TGG | + | chr5_2:22698929-22698948 | None:intergenic | 40.0% |
| !!! | TGAGTGCATGTTTTGATCGA+TGG | + | chr5_2:22698938-22698957 | None:intergenic | 40.0% |
| TGGATGCGAATCAAAGAACT+TGG | - | chr5_2:22698980-22698999 | Msa0763470:intron | 40.0% | |
| CTGCTTTGGTATGATTAGTG+TGG | + | chr5_2:22699088-22699107 | None:intergenic | 40.0% | |
| CACACTAATCATACCAAAGC+AGG | - | chr5_2:22699086-22699105 | Msa0763470:intron | 40.0% | |
| !! | CACATGTTTTTAACAGGGCT+TGG | - | chr5_2:22699183-22699202 | Msa0763470:intron | 40.0% |
| ACAGTGTAATGCCACAAATG+AGG | - | chr5_2:22699244-22699263 | Msa0763470:intron | 40.0% | |
| GAAAACTTCCTCCTCATTTG+TGG | + | chr5_2:22699258-22699277 | None:intergenic | 40.0% | |
| GAAAGATCCCTTTATCCTGT+TGG | - | chr5_2:22699290-22699309 | Msa0763470:intron | 40.0% | |
| GATCCATCCAACAGGATAAA+GGG | + | chr5_2:22699300-22699319 | None:intergenic | 40.0% | |
| GTTGCCTAAGACTTGCAATA+TGG | + | chr5_2:22699351-22699370 | None:intergenic | 40.0% | |
| ! | GCTCACACTGATTAACATAG+GGG | + | chr5_2:22699409-22699428 | None:intergenic | 40.0% |
| ! | AAGTTGTTTCATGTCATCGG+TGG | - | chr5_2:22699508-22699527 | Msa0763470:intron | 40.0% |
| !! | TTTTCAGGCAATGATTCCTG+AGG | - | chr5_2:22699815-22699834 | Msa0763470:intron | 40.0% |
| AATACAATCGCAAATGCCTC+AGG | + | chr5_2:22699834-22699853 | None:intergenic | 40.0% | |
| ! | TGAGGCATTTGCGATTGTAT+TGG | - | chr5_2:22699833-22699852 | Msa0763470:intron | 40.0% |
| GAAAATTGGCTGCAACTACA+AGG | + | chr5_2:22699906-22699925 | None:intergenic | 40.0% | |
| !! | CCATTATCTGGTTCTTTGTG+TGG | + | chr5_2:22700212-22700231 | None:intergenic | 40.0% |
| CCACACAAAGAACCAGATAA+TGG | - | chr5_2:22700209-22700228 | Msa0763470:intron | 40.0% | |
| GCGAATACATATTGGACTCA+TGG | + | chr5_2:22700429-22700448 | None:intergenic | 40.0% | |
| TTCACACCGAAAGACACATG+CGG | + | chr5_2:22696168-22696187 | None:intergenic | 45.0% | |
| AATGACACGATCCTTAAGGC+AGG | - | chr5_2:22696187-22696206 | Msa0763470:three_prime_UTR | 45.0% | |
| CATCTATGATTCACGGACAC+GGG | - | chr5_2:22696697-22696716 | Msa0763470:intron | 45.0% | |
| !! | CATATGTGTTGGTGCTGTGT+TGG | - | chr5_2:22696774-22696793 | Msa0763470:intron | 45.0% |
| ACACAGACACTTCTCGGATT+AGG | + | chr5_2:22696831-22696850 | None:intergenic | 45.0% | |
| CACGATAAGTATCCGACACT+GGG | + | chr5_2:22696966-22696985 | None:intergenic | 45.0% | |
| ACACGATAAGTATCCGACAC+TGG | + | chr5_2:22696967-22696986 | None:intergenic | 45.0% | |
| GATGCAGAGAGTCGTTGATA+AGG | - | chr5_2:22697770-22697789 | Msa0763470:intron | 45.0% | |
| ! | TCGTTGATAAGGAAGCAGCT+GGG | - | chr5_2:22697781-22697800 | Msa0763470:intron | 45.0% |
| GACTACTCAAACCTCGTCAT+TGG | + | chr5_2:22697818-22697837 | None:intergenic | 45.0% | |
| ! | TAGTCGTTGCTGGTTACAAC+TGG | - | chr5_2:22697833-22697852 | Msa0763470:intron | 45.0% |
| ! | GCGAGGACTTGGTTACTTTA+TGG | + | chr5_2:22697914-22697933 | None:intergenic | 45.0% |
| !! | TGAAGCACCGTCATAGACAT+CGG | + | chr5_2:22698259-22698278 | None:intergenic | 45.0% |
| TGTCTATGACGGTGCTTCAT+AGG | - | chr5_2:22698260-22698279 | Msa0763470:intron | 45.0% | |
| !! | TTAGATGCCGATTCCTGCTT+TGG | + | chr5_2:22699102-22699121 | None:intergenic | 45.0% |
| GTGTAATGCCACAAATGAGG+AGG | - | chr5_2:22699247-22699266 | Msa0763470:intron | 45.0% | |
| GATCCCTTTATCCTGTTGGA+TGG | - | chr5_2:22699294-22699313 | Msa0763470:intron | 45.0% | |
| GGATCCATCCAACAGGATAA+AGG | + | chr5_2:22699301-22699320 | None:intergenic | 45.0% | |
| CATACATGGATCCATCCAAC+AGG | + | chr5_2:22699308-22699327 | None:intergenic | 45.0% | |
| GCACACTCAATATTCCTACC+AGG | - | chr5_2:22699535-22699554 | Msa0763470:intron | 45.0% | |
| AGTTGGATCAATCACCTGGT+AGG | + | chr5_2:22699552-22699571 | None:intergenic | 45.0% | |
| ATGTTCTTTCTCAGGAGCTG+TGG | - | chr5_2:22700119-22700138 | Msa0763470:intron | 45.0% | |
| TCTCTTTCGCCTAACTGAAC+CGG | - | chr5_2:22700142-22700161 | Msa0763470:intron | 45.0% | |
| ! | TTCTAAGAAGTTGTCCGGAG+AGG | - | chr5_2:22700177-22700196 | Msa0763470:intron | 45.0% |
| TCTAAGAAGTTGTCCGGAGA+GGG | - | chr5_2:22700178-22700197 | Msa0763470:intron | 45.0% | |
| TACACAGGGTTGCCATTATC+TGG | + | chr5_2:22700224-22700243 | None:intergenic | 45.0% | |
| TCACACCGAAAGACACATGC+GGG | + | chr5_2:22696167-22696186 | None:intergenic | 50.0% | |
| CATTGTTCCCACCCCTCTAA+AGG | - | chr5_2:22696863-22696882 | Msa0763470:intron | 50.0% | |
| ACAAACTAAGACACGGGCAC+CGG | + | chr5_2:22697146-22697165 | None:intergenic | 50.0% | |
| ! | GTCGTTGATAAGGAAGCAGC+TGG | - | chr5_2:22697780-22697799 | Msa0763470:intron | 50.0% |
| GAGGTTTGAGTAGTCGTTGC+TGG | - | chr5_2:22697823-22697842 | Msa0763470:intron | 50.0% | |
| ACCGTCATAGACATCGGACA+CGG | + | chr5_2:22698253-22698272 | None:intergenic | 50.0% | |
| ! | CCTCCATTAACCGCATTGAC+TGG | + | chr5_2:22698376-22698395 | None:intergenic | 50.0% |
| CCAGTCAATGCGGTTAATGG+AGG | - | chr5_2:22698373-22698392 | Msa0763470:intron | 50.0% | |
| TATAGAGGGTTCCCTTCTCC+TGG | + | chr5_2:22699062-22699081 | None:intergenic | 50.0% | |
| TGGCACCAACTGATACCTCA+AGG | - | chr5_2:22699853-22699872 | Msa0763470:intron | 50.0% | |
| TTTCGCCTAACTGAACCGGA+TGG | - | chr5_2:22700146-22700165 | Msa0763470:intron | 50.0% | |
| CCATACCATCCGGTTCAGTT+AGG | + | chr5_2:22700154-22700173 | None:intergenic | 50.0% | |
| CCTAACTGAACCGGATGGTA+TGG | - | chr5_2:22700151-22700170 | Msa0763470:intron | 50.0% | |
| CTAAGAAGTTGTCCGGAGAG+GGG | - | chr5_2:22700179-22700198 | Msa0763470:intron | 50.0% | |
| TGTGGATGAAATCCCCTCTC+CGG | + | chr5_2:22700194-22700213 | None:intergenic | 50.0% | |
| TGGTGAGAGTCATATCACCG+TGG | + | chr5_2:22700366-22700385 | None:intergenic | 50.0% | |
| GGAGTCCCGCATGTGTCTTT+CGG | - | chr5_2:22696159-22696178 | Msa0763470:three_prime_UTR | 55.0% | |
| TGTCCTGGAAGCCAGACACA+CGG | + | chr5_2:22696806-22696825 | None:intergenic | 55.0% | |
| ! | TTCTCGGATTAGGCGTGTCC+TGG | + | chr5_2:22696821-22696840 | None:intergenic | 55.0% |
| GGTTAGGTGTGTCCCAGTGT+CGG | - | chr5_2:22696951-22696970 | Msa0763470:intron | 55.0% | |
| ACACAACACAGTGCAGGGGA+AGG | + | chr5_2:22697936-22697955 | None:intergenic | 55.0% | |
| TTCCCCTGCACTGTGTTGTG+TGG | - | chr5_2:22697935-22697954 | Msa0763470:intron | 55.0% | |
| CTCCACACAACACAGTGCAG+GGG | + | chr5_2:22697940-22697959 | None:intergenic | 55.0% | |
| GCTCCACACAACACAGTGCA+GGG | + | chr5_2:22697941-22697960 | None:intergenic | 55.0% | |
| ACTGTGTTGTGTGGAGCCAG+TGG | - | chr5_2:22697944-22697963 | Msa0763470:intron | 55.0% | |
| ! | ATTGAAGGTGCGTCCGACAC+CGG | - | chr5_2:22698164-22698183 | Msa0763470:intron | 55.0% |
| ! | GTAATCACACGTGCCGGTGT+CGG | + | chr5_2:22698180-22698199 | None:intergenic | 55.0% |
| GCCGTGTCCGATGTCTATGA+CGG | - | chr5_2:22698249-22698268 | Msa0763470:intron | 55.0% | |
| TGGAGCAGTGCTCGTACACA+GGG | + | chr5_2:22700238-22700257 | None:intergenic | 55.0% | |
| TTGGAGCAGTGCTCGTACAC+AGG | + | chr5_2:22700239-22700258 | None:intergenic | 55.0% | |
| CAGCGCATACTGTCCCACAA+TGG | - | chr5_2:22700321-22700340 | Msa0763470:intron | 55.0% | |
| GTTGGACACACCCGTGTGTC+TGG | - | chr5_2:22696792-22696811 | Msa0763470:intron | 60.0% | |
| GTCCTGGAAGCCAGACACAC+GGG | + | chr5_2:22696805-22696824 | None:intergenic | 60.0% | |
| GGTGTCAACGTGTCCGTGTC+CGG | - | chr5_2:22697124-22697143 | Msa0763470:intron | 60.0% | |
| !! | TAAGACACGGGCACCGGACA+CGG | + | chr5_2:22697140-22697159 | None:intergenic | 60.0% |
| GGCTCCACACAACACAGTGC+AGG | + | chr5_2:22697942-22697961 | None:intergenic | 60.0% | |
| CAAGGGCAGTGGCCTCCATA+AGG | + | chr5_2:22698320-22698339 | None:intergenic | 60.0% | |
| ! | CACCCGTGTGTCTGGCTTCC+AGG | - | chr5_2:22696800-22696819 | Msa0763470:intron | 65.0% |
| TGCAGGGGAAGGCGAGGACT+TGG | + | chr5_2:22697925-22697944 | None:intergenic | 65.0% | |
| ACACAGTGCAGGGGAAGGCG+AGG | + | chr5_2:22697931-22697950 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 22696112 | 22700639 | 22696112 | ID=Msa0763470;Name=Msa0763470 |
| chr5_2 | mRNA | 22696112 | 22700639 | 22696112 | ID=Msa0763470-mRNA-1;Parent=Msa0763470;Name=Msa0763470-mRNA-1;_AED=0.21;_eAED=0.21;_QI=290|1|1|1|0.71|0.75|8|332|235 |
| chr5_2 | exon | 22696112 | 22696618 | 22696112 | ID=Msa0763470-mRNA-1:exon:9349;Parent=Msa0763470-mRNA-1 |
| chr5_2 | exon | 22696877 | 22696929 | 22696877 | ID=Msa0763470-mRNA-1:exon:9348;Parent=Msa0763470-mRNA-1 |
| chr5_2 | exon | 22697195 | 22697257 | 22697195 | ID=Msa0763470-mRNA-1:exon:9347;Parent=Msa0763470-mRNA-1 |
| chr5_2 | exon | 22697429 | 22697503 | 22697429 | ID=Msa0763470-mRNA-1:exon:9346;Parent=Msa0763470-mRNA-1 |
| chr5_2 | exon | 22697626 | 22697688 | 22697626 | ID=Msa0763470-mRNA-1:exon:9345;Parent=Msa0763470-mRNA-1 |
| chr5_2 | exon | 22698285 | 22698374 | 22698285 | ID=Msa0763470-mRNA-1:exon:9344;Parent=Msa0763470-mRNA-1 |
| chr5_2 | exon | 22698678 | 22698974 | 22698678 | ID=Msa0763470-mRNA-1:exon:9343;Parent=Msa0763470-mRNA-1 |
| chr5_2 | exon | 22700458 | 22700639 | 22700458 | ID=Msa0763470-mRNA-1:exon:9342;Parent=Msa0763470-mRNA-1 |
| chr5_2 | five_prime_UTR | 22700458 | 22700639 | 22700458 | ID=Msa0763470-mRNA-1:five_prime_utr;Parent=Msa0763470-mRNA-1 |
| chr5_2 | five_prime_UTR | 22698867 | 22698974 | 22698867 | ID=Msa0763470-mRNA-1:five_prime_utr;Parent=Msa0763470-mRNA-1 |
| chr5_2 | CDS | 22698678 | 22698866 | 22698678 | ID=Msa0763470-mRNA-1:cds;Parent=Msa0763470-mRNA-1 |
| chr5_2 | CDS | 22698285 | 22698374 | 22698285 | ID=Msa0763470-mRNA-1:cds;Parent=Msa0763470-mRNA-1 |
| chr5_2 | CDS | 22697626 | 22697688 | 22697626 | ID=Msa0763470-mRNA-1:cds;Parent=Msa0763470-mRNA-1 |
| chr5_2 | CDS | 22697429 | 22697503 | 22697429 | ID=Msa0763470-mRNA-1:cds;Parent=Msa0763470-mRNA-1 |
| chr5_2 | CDS | 22697195 | 22697257 | 22697195 | ID=Msa0763470-mRNA-1:cds;Parent=Msa0763470-mRNA-1 |
| chr5_2 | CDS | 22696877 | 22696929 | 22696877 | ID=Msa0763470-mRNA-1:cds;Parent=Msa0763470-mRNA-1 |
| chr5_2 | CDS | 22696444 | 22696618 | 22696444 | ID=Msa0763470-mRNA-1:cds;Parent=Msa0763470-mRNA-1 |
| chr5_2 | three_prime_UTR | 22696112 | 22696443 | 22696112 | ID=Msa0763470-mRNA-1:three_prime_utr;Parent=Msa0763470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
