Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764310 | A0A396JPN4 | 54.682 | 267 | 77 | 6 | 1 | 227 | 91 | 353 | 4.19e-79 | 253 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0764310 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0764310 | Msa0764320 | 0.901096 | 3.784096e-78 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764310 | MtrunA17_Chr1g0163181 | 54.682 | 267 | 77 | 6 | 1 | 227 | 91 | 353 | 8.06e-83 | 253 |
| Msa0764310 | MtrunA17_Chr1g0163201 | 52.918 | 257 | 62 | 5 | 1 | 227 | 89 | 316 | 6.86e-68 | 214 |
| Msa0764310 | MtrunA17_Chr1g0163111 | 67.105 | 152 | 42 | 2 | 56 | 207 | 3 | 146 | 7.59e-64 | 198 |
| Msa0764310 | MtrunA17_Chr1g0163151 | 56.395 | 172 | 46 | 1 | 56 | 227 | 3 | 145 | 2.62e-58 | 184 |
| Msa0764310 | MtrunA17_Chr1g0163251 | 40.310 | 258 | 105 | 9 | 1 | 216 | 91 | 341 | 4.20e-45 | 154 |
| Msa0764310 | MtrunA17_Chr1g0163261 | 36.500 | 200 | 103 | 3 | 1 | 177 | 95 | 293 | 1.13e-31 | 117 |
| Msa0764310 | MtrunA17_Chr1g0163091 | 42.424 | 132 | 71 | 1 | 56 | 182 | 3 | 134 | 1.14e-28 | 105 |
| Msa0764310 | MtrunA17_Chr1g0163231 | 40.625 | 192 | 86 | 8 | 1 | 169 | 95 | 281 | 1.15e-28 | 109 |
| Msa0764310 | MtrunA17_Chr1g0171611 | 37.629 | 194 | 77 | 6 | 1 | 169 | 95 | 269 | 1.50e-26 | 103 |
| Msa0764310 | MtrunA17_Chr1g0162151 | 40.310 | 129 | 77 | 0 | 51 | 179 | 3 | 131 | 2.56e-23 | 93.6 |
| Msa0764310 | MtrunA17_Chr6g0476171 | 40.541 | 111 | 59 | 3 | 68 | 176 | 34 | 139 | 4.12e-17 | 77.8 |
| Msa0764310 | MtrunA17_Chr5g0419211 | 31.579 | 95 | 64 | 1 | 89 | 182 | 11 | 105 | 2.59e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 48 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGTGGTTGGAAAATATTC+AGG | 0.287827 | 5_2:-24169901 | Msa0764310:CDS |
| TAACGCCAATGGCTATAATT+TGG | 0.309691 | 5_2:-24170127 | Msa0764310:intron |
| ATAAAGGGCCTGCAACAATA+TGG | 0.324459 | 5_2:-24169991 | Msa0764310:CDS |
| ACATTGGGGAAACTTCTTCT+AGG | 0.333835 | 5_2:-24169586 | Msa0764310:CDS |
| CTTATATTGTTAGTGATGTT+TGG | 0.354932 | 5_2:-24170839 | None:intergenic |
| GCATAACCCATTGATGGTTT+TGG | 0.355991 | 5_2:-24168465 | Msa0764310:CDS |
| TTACCAACCCATATTGTTGC+AGG | 0.356512 | 5_2:+24169983 | None:intergenic |
| GAACACTTGATGGATTATAA+AGG | 0.363316 | 5_2:-24170007 | Msa0764310:CDS |
| CCTGGTAATTTCTTAGGGCT+TGG | 0.374720 | 5_2:+24169779 | None:intergenic |
| CACTACTCATAATAGATCTT+TGG | 0.378317 | 5_2:+24169918 | None:intergenic |
| TTCTTCACCAAAACCATCAA+TGG | 0.382053 | 5_2:+24168458 | None:intergenic |
| TCATTAACAGTTCCAGATGT+TGG | 0.400715 | 5_2:+24170183 | None:intergenic |
| TGTTCTCTTGAAAACTTACT+TGG | 0.404641 | 5_2:+24170025 | None:intergenic |
| CATTAACAGTTCCAGATGTT+GGG | 0.406126 | 5_2:+24170184 | None:intergenic |
| ATGGCTGTGGAAGTGAGCTT+GGG | 0.424295 | 5_2:-24169956 | Msa0764310:CDS |
| ACTATTACTCGTGGCAGAAA+TGG | 0.435968 | 5_2:-24169803 | Msa0764310:CDS |
| GATGAAGCATAACCCATTGA+TGG | 0.439436 | 5_2:-24168471 | Msa0764310:CDS |
| AACAAAGCAATCTCAAAGAA+AGG | 0.443342 | 5_2:-24170690 | Msa0764310:CDS |
| TTTATGTAATTAATCATATC+GGG | 0.445886 | 5_2:+24168429 | None:intergenic |
| TTGTAAAGAAGAAAGACATT+GGG | 0.450727 | 5_2:-24169601 | Msa0764310:CDS |
| AACACTTGATGGATTATAAA+GGG | 0.456345 | 5_2:-24170006 | Msa0764310:CDS |
| AATATGGGTTGGTAAGGAAA+TGG | 0.458034 | 5_2:-24169975 | Msa0764310:CDS |
| GCTAGAAAATACCCAACATC+TGG | 0.468222 | 5_2:-24170195 | Msa0764310:CDS |
| AATGGCTGTGGAAGTGAGCT+TGG | 0.471175 | 5_2:-24169957 | Msa0764310:CDS |
| TCTTCACCAAAACCATCAAT+GGG | 0.500900 | 5_2:+24168459 | None:intergenic |
| TAAAGGGCCTGCAACAATAT+GGG | 0.501208 | 5_2:-24169990 | Msa0764310:CDS |
| TGCAACAATATGGGTTGGTA+AGG | 0.502211 | 5_2:-24169981 | Msa0764310:CDS |
| CCAAGCCCTAAGAAATTACC+AGG | 0.507995 | 5_2:-24169779 | Msa0764310:intron |
| ATGAAGAGAGTGATGAATTG+AGG | 0.511380 | 5_2:-24170739 | Msa0764310:CDS |
| CTTGTAAAGAAGAAAGACAT+TGG | 0.513890 | 5_2:-24169602 | Msa0764310:CDS |
| TGAAGAGAGTGATGAATTGA+GGG | 0.515870 | 5_2:-24170738 | Msa0764310:CDS |
| ACAAAGCAATCTCAAAGAAA+GGG | 0.516491 | 5_2:-24170689 | Msa0764310:CDS |
| ACTTACCAAATTATAGCCAT+TGG | 0.516643 | 5_2:+24170122 | None:intergenic |
| GATCTATTATGAGTAGTGGT+TGG | 0.518269 | 5_2:-24169913 | Msa0764310:CDS |
| AATATAAAATCAGTTGATGA+AGG | 0.529972 | 5_2:-24170788 | Msa0764310:CDS |
| GGTTGGTAAGGAAATGGCTG+TGG | 0.531845 | 5_2:-24169969 | Msa0764310:CDS |
| GTAAATTTGAGATGATTCAT+CGG | 0.551503 | 5_2:-24169847 | Msa0764310:CDS |
| TAGTGGTTGGAAAATATTCA+GGG | 0.551832 | 5_2:-24169900 | Msa0764310:CDS |
| ATAGTAACAGTGAATGATGC+AGG | 0.558530 | 5_2:+24169821 | None:intergenic |
| ACTCATAATAGATCTTTGGC+AGG | 0.560871 | 5_2:+24169922 | None:intergenic |
| CAAAGATCTATTATGAGTAG+TGG | 0.575571 | 5_2:-24169917 | Msa0764310:CDS |
| GGTGCTGAAGACACAGAAGA+AGG | 0.585468 | 5_2:-24170767 | Msa0764310:CDS |
| GGGCCTGCAACAATATGGGT+TGG | 0.600063 | 5_2:-24169986 | Msa0764310:CDS |
| TTGTCACATCATAACGCCAA+TGG | 0.632543 | 5_2:-24170138 | Msa0764310:CDS |
| TTCACTGTTACTATTACTCG+TGG | 0.635895 | 5_2:-24169812 | Msa0764310:CDS |
| TGGCTGTGGAAGTGAGCTTG+GGG | 0.650161 | 5_2:-24169955 | Msa0764310:CDS |
| TGTAAAGAAGAAAGACATTG+GGG | 0.650633 | 5_2:-24169600 | Msa0764310:CDS |
| GAGGGATGAGAGTTCATACG+AGG | 0.738856 | 5_2:-24170720 | Msa0764310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAATAATTACTTTTTTTTA+AGG | - | chr5_2:24168768-24168787 | Msa0764310:intron | 10.0% |
| !!! | GAAATAATTACTTTTTTTTA+AGG | - | chr5_2:24168768-24168787 | Msa0764310:intron | 10.0% |
| !!! | GATTATTTTTAGAAGATTTT+AGG | + | chr5_2:24168977-24168996 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCTCTTTTCATT+TGG | - | chr5_2:24169776-24169795 | Msa0764310:intron | 15.0% |
| !!! | GTATTTAAAATTAAAGCATA+AGG | + | chr5_2:24169857-24169876 | None:intergenic | 15.0% |
| !! | TTAAAATTGTTAGAATTGTT+AGG | - | chr5_2:24170003-24170022 | Msa0764310:CDS | 15.0% |
| !!! | GGTTTATGTTTTATAATTTT+AGG | - | chr5_2:24170024-24170043 | Msa0764310:CDS | 15.0% |
| !!! | TTATAATTTTAGGATAGTTT+AGG | - | chr5_2:24170034-24170053 | Msa0764310:CDS | 15.0% |
| !! | TAAAAATCATTTCAAATTCA+CGG | + | chr5_2:24170594-24170613 | None:intergenic | 15.0% |
| !!! | TCAAATATCTCTAAATTTTT+TGG | - | chr5_2:24170707-24170726 | Msa0764310:CDS | 15.0% |
| !!! | CAAATATCTCTAAATTTTTT+GGG | - | chr5_2:24170708-24170727 | Msa0764310:CDS | 15.0% |
| !!! | GATTATTTTTAGAAGATTTT+AGG | + | chr5_2:24168977-24168996 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCTCTTTTCATT+TGG | - | chr5_2:24169776-24169795 | Msa0764310:intron | 15.0% |
| !!! | GTATTTAAAATTAAAGCATA+AGG | + | chr5_2:24169857-24169876 | None:intergenic | 15.0% |
| !! | TTAAAATTGTTAGAATTGTT+AGG | - | chr5_2:24170003-24170022 | Msa0764310:CDS | 15.0% |
| !!! | GGTTTATGTTTTATAATTTT+AGG | - | chr5_2:24170024-24170043 | Msa0764310:CDS | 15.0% |
| !!! | TTATAATTTTAGGATAGTTT+AGG | - | chr5_2:24170034-24170053 | Msa0764310:CDS | 15.0% |
| !! | TAAAAATCATTTCAAATTCA+CGG | + | chr5_2:24170594-24170613 | None:intergenic | 15.0% |
| !!! | TCAAATATCTCTAAATTTTT+TGG | - | chr5_2:24170707-24170726 | Msa0764310:CDS | 15.0% |
| !!! | CAAATATCTCTAAATTTTTT+GGG | - | chr5_2:24170708-24170727 | Msa0764310:CDS | 15.0% |
| !!! | TTCATCAACTGATTTTATAT+TGG | + | chr5_2:24168479-24168498 | None:intergenic | 20.0% |
| !!! | AATATAAAATCAGTTGATGA+AGG | - | chr5_2:24168478-24168497 | Msa0764310:CDS | 20.0% |
| !!! | TTTTCTCTACAGATAATTTT+TGG | - | chr5_2:24168889-24168908 | Msa0764310:intron | 20.0% |
| !! | GACAATGTAATTTCAAAAAA+GGG | + | chr5_2:24169113-24169132 | None:intergenic | 20.0% |
| !! | TGACAATGTAATTTCAAAAA+AGG | + | chr5_2:24169114-24169133 | None:intergenic | 20.0% |
| !! | AAATTCATAGATACTTTGTA+TGG | + | chr5_2:24169173-24169192 | None:intergenic | 20.0% |
| !!! | ATGAATAGTTTATGAGTTTT+TGG | - | chr5_2:24169810-24169829 | Msa0764310:CDS | 20.0% |
| !! | CTAAACATAAAACTAAATAC+TGG | + | chr5_2:24169950-24169969 | None:intergenic | 20.0% |
| !!! | CAGTATTTAGTTTTATGTTT+AGG | - | chr5_2:24169948-24169967 | Msa0764310:CDS | 20.0% |
| !! | TTAGAATTGTTAGAATTGTT+AGG | - | chr5_2:24170057-24170076 | Msa0764310:intron | 20.0% |
| !! | TAGAATTGTTAGAATTGTTT+AGG | - | chr5_2:24170102-24170121 | Msa0764310:intron | 20.0% |
| !! | TGTTAGAATTGTTTAGATTT+AGG | - | chr5_2:24170169-24170188 | Msa0764310:CDS | 20.0% |
| !!! | ATTTCATTGTTGTTTAGTTT+AGG | - | chr5_2:24170246-24170265 | Msa0764310:intron | 20.0% |
| !!! | TTATGAATAGTTTGAGTTTT+TGG | - | chr5_2:24170524-24170543 | Msa0764310:intron | 20.0% |
| !!! | GTATTTAAAATTAAGGCTTA+AGG | + | chr5_2:24170571-24170590 | None:intergenic | 20.0% |
| !! | AAAAATCATTTCAAATTCAC+GGG | + | chr5_2:24170593-24170612 | None:intergenic | 20.0% |
| !! | AAAAAGAAGAAACTAAATAC+TGG | + | chr5_2:24170661-24170680 | None:intergenic | 20.0% |
| !!! | TTCATCAACTGATTTTATAT+TGG | + | chr5_2:24168479-24168498 | None:intergenic | 20.0% |
| !!! | AATATAAAATCAGTTGATGA+AGG | - | chr5_2:24168478-24168497 | Msa0764310:CDS | 20.0% |
| !!! | TTTTCTCTACAGATAATTTT+TGG | - | chr5_2:24168889-24168908 | Msa0764310:intron | 20.0% |
| !! | GACAATGTAATTTCAAAAAA+GGG | + | chr5_2:24169113-24169132 | None:intergenic | 20.0% |
| !! | TGACAATGTAATTTCAAAAA+AGG | + | chr5_2:24169114-24169133 | None:intergenic | 20.0% |
| !! | AAATTCATAGATACTTTGTA+TGG | + | chr5_2:24169173-24169192 | None:intergenic | 20.0% |
| !!! | ATGAATAGTTTATGAGTTTT+TGG | - | chr5_2:24169810-24169829 | Msa0764310:CDS | 20.0% |
| !! | CTAAACATAAAACTAAATAC+TGG | + | chr5_2:24169950-24169969 | None:intergenic | 20.0% |
| !!! | CAGTATTTAGTTTTATGTTT+AGG | - | chr5_2:24169948-24169967 | Msa0764310:CDS | 20.0% |
| !! | TTAGAATTGTTAGAATTGTT+AGG | - | chr5_2:24170057-24170076 | Msa0764310:intron | 20.0% |
| !! | TAGAATTGTTAGAATTGTTT+AGG | - | chr5_2:24170102-24170121 | Msa0764310:intron | 20.0% |
| !! | TGTTAGAATTGTTTAGATTT+AGG | - | chr5_2:24170169-24170188 | Msa0764310:CDS | 20.0% |
| !!! | ATTTCATTGTTGTTTAGTTT+AGG | - | chr5_2:24170246-24170265 | Msa0764310:intron | 20.0% |
| !!! | TTATGAATAGTTTGAGTTTT+TGG | - | chr5_2:24170524-24170543 | Msa0764310:intron | 20.0% |
| !!! | GTATTTAAAATTAAGGCTTA+AGG | + | chr5_2:24170571-24170590 | None:intergenic | 20.0% |
| !! | AAAAATCATTTCAAATTCAC+GGG | + | chr5_2:24170593-24170612 | None:intergenic | 20.0% |
| !! | AAAAAGAAGAAACTAAATAC+TGG | + | chr5_2:24170661-24170680 | None:intergenic | 20.0% |
| ! | ATTACTCATTAGCTAGATTA+AGG | - | chr5_2:24168701-24168720 | Msa0764310:intron | 25.0% |
| !! | TAAACTATGATTTGAAACAG+TGG | - | chr5_2:24169215-24169234 | Msa0764310:intron | 25.0% |
| !!! | AACACTTGATGGATTATAAA+GGG | - | chr5_2:24169260-24169279 | Msa0764310:intron | 25.0% |
| !! | GTAAATTTGAGATGATTCAT+CGG | - | chr5_2:24169419-24169438 | Msa0764310:intron | 25.0% |
| ! | AAAAACCTGGTAATTTCTTA+GGG | + | chr5_2:24169495-24169514 | None:intergenic | 25.0% |
| ! | TCCATGACATGTTATAAAAA+AGG | - | chr5_2:24169622-24169641 | Msa0764310:CDS | 25.0% |
| ! | CCATGACATGTTATAAAAAA+GGG | - | chr5_2:24169623-24169642 | Msa0764310:CDS | 25.0% |
| ! | CATGACATGTTATAAAAAAG+GGG | - | chr5_2:24169624-24169643 | Msa0764310:CDS | 25.0% |
| ! | TTGTAAAGAAGAAAGACATT+GGG | - | chr5_2:24169665-24169684 | Msa0764310:intron | 25.0% |
| !! | CAAGAAAATTTTCTTTTGGA+CGG | + | chr5_2:24169708-24169727 | None:intergenic | 25.0% |
| !! | TCCAAAAGAAAATTTTCTTG+AGG | - | chr5_2:24169708-24169727 | Msa0764310:intron | 25.0% |
| !! | CCAAAAGAAAATTTTCTTGA+GGG | - | chr5_2:24169709-24169728 | Msa0764310:intron | 25.0% |
| ! | AAAAGTCATTTCAAATTCAC+TGG | + | chr5_2:24169879-24169898 | None:intergenic | 25.0% |
| ! | ACTAAATACTGGATAAGTTT+AGG | + | chr5_2:24169939-24169958 | None:intergenic | 25.0% |
| ! | TTGTTAGAATTGTTAGGTTT+AGG | - | chr5_2:24170009-24170028 | Msa0764310:CDS | 25.0% |
| !! | TGTTAGAATTGTTTAGGTTT+AGG | - | chr5_2:24170108-24170127 | Msa0764310:intron | 25.0% |
| ! | AATTGTTTAGATTTAGGTGT+AGG | - | chr5_2:24170175-24170194 | Msa0764310:CDS | 25.0% |
| !!! | TTTTGTGATAGTTTAGGTTT+AGG | - | chr5_2:24170199-24170218 | Msa0764310:CDS | 25.0% |
| ! | AAACTATTCATAAGTCAATC+GGG | + | chr5_2:24170517-24170536 | None:intergenic | 25.0% |
| ! | CAAACTATTCATAAGTCAAT+CGG | + | chr5_2:24170518-24170537 | None:intergenic | 25.0% |
| !! | TTCACGGGTATTTAAAATTA+AGG | + | chr5_2:24170578-24170597 | None:intergenic | 25.0% |
| ! | ACTAAATACTGGATAAGTTT+AGG | + | chr5_2:24169939-24169958 | None:intergenic | 25.0% |
| ! | ATTACTCATTAGCTAGATTA+AGG | - | chr5_2:24168701-24168720 | Msa0764310:intron | 25.0% |
| !! | TAAACTATGATTTGAAACAG+TGG | - | chr5_2:24169215-24169234 | Msa0764310:intron | 25.0% |
| !!! | AACACTTGATGGATTATAAA+GGG | - | chr5_2:24169260-24169279 | Msa0764310:intron | 25.0% |
| !! | GTAAATTTGAGATGATTCAT+CGG | - | chr5_2:24169419-24169438 | Msa0764310:intron | 25.0% |
| ! | AAAAACCTGGTAATTTCTTA+GGG | + | chr5_2:24169495-24169514 | None:intergenic | 25.0% |
| ! | TCCATGACATGTTATAAAAA+AGG | - | chr5_2:24169622-24169641 | Msa0764310:CDS | 25.0% |
| ! | CCATGACATGTTATAAAAAA+GGG | - | chr5_2:24169623-24169642 | Msa0764310:CDS | 25.0% |
| ! | CATGACATGTTATAAAAAAG+GGG | - | chr5_2:24169624-24169643 | Msa0764310:CDS | 25.0% |
| ! | TTGTAAAGAAGAAAGACATT+GGG | - | chr5_2:24169665-24169684 | Msa0764310:intron | 25.0% |
| !! | CAAGAAAATTTTCTTTTGGA+CGG | + | chr5_2:24169708-24169727 | None:intergenic | 25.0% |
| !! | TCCAAAAGAAAATTTTCTTG+AGG | - | chr5_2:24169708-24169727 | Msa0764310:intron | 25.0% |
| !! | CCAAAAGAAAATTTTCTTGA+GGG | - | chr5_2:24169709-24169728 | Msa0764310:intron | 25.0% |
| ! | AAAAGTCATTTCAAATTCAC+TGG | + | chr5_2:24169879-24169898 | None:intergenic | 25.0% |
| ! | ACTAAATACTGGATAAGTTT+AGG | + | chr5_2:24169939-24169958 | None:intergenic | 25.0% |
| ! | TTGTTAGAATTGTTAGGTTT+AGG | - | chr5_2:24170009-24170028 | Msa0764310:CDS | 25.0% |
| !! | TGTTAGAATTGTTTAGGTTT+AGG | - | chr5_2:24170108-24170127 | Msa0764310:intron | 25.0% |
| ! | AATTGTTTAGATTTAGGTGT+AGG | - | chr5_2:24170175-24170194 | Msa0764310:CDS | 25.0% |
| !!! | TTTTGTGATAGTTTAGGTTT+AGG | - | chr5_2:24170199-24170218 | Msa0764310:CDS | 25.0% |
| ! | AAACTATTCATAAGTCAATC+GGG | + | chr5_2:24170517-24170536 | None:intergenic | 25.0% |
| ! | CAAACTATTCATAAGTCAAT+CGG | + | chr5_2:24170518-24170537 | None:intergenic | 25.0% |
| !! | TTCACGGGTATTTAAAATTA+AGG | + | chr5_2:24170578-24170597 | None:intergenic | 25.0% |
| ! | ACTAAATACTGGATAAGTTT+AGG | + | chr5_2:24169939-24169958 | None:intergenic | 25.0% |
| AACAAAGCAATCTCAAAGAA+AGG | - | chr5_2:24168576-24168595 | Msa0764310:intron | 30.0% | |
| ACAAAGCAATCTCAAAGAAA+GGG | - | chr5_2:24168577-24168596 | Msa0764310:intron | 30.0% | |
| AAGAAAGGGAAAAAGAAAAG+TGG | - | chr5_2:24168591-24168610 | Msa0764310:intron | 30.0% | |
| AGAAAGGGAAAAAGAAAAGT+GGG | - | chr5_2:24168592-24168611 | Msa0764310:intron | 30.0% | |
| ! | GAAAAATCACCTGAGAATTT+TGG | + | chr5_2:24168640-24168659 | None:intergenic | 30.0% |
| ! | CTAAAACTGCTTCTCATTTT+AGG | + | chr5_2:24168865-24168884 | None:intergenic | 30.0% |
| TATTACTACCTGCAAAGTTT+AGG | + | chr5_2:24169031-24169050 | None:intergenic | 30.0% | |
| AGGTAGTAATAAAATAGCCA+TGG | - | chr5_2:24169040-24169059 | Msa0764310:intron | 30.0% | |
| TAATAAAATAGCCATGGTGA+AGG | - | chr5_2:24169046-24169065 | Msa0764310:intron | 30.0% | |
| ACTTACCAAATTATAGCCAT+TGG | + | chr5_2:24169147-24169166 | None:intergenic | 30.0% | |
| TGTTCTCTTGAAAACTTACT+TGG | + | chr5_2:24169244-24169263 | None:intergenic | 30.0% | |
| !! | GAACACTTGATGGATTATAA+AGG | - | chr5_2:24169259-24169278 | Msa0764310:intron | 30.0% |
| CACTACTCATAATAGATCTT+TGG | + | chr5_2:24169351-24169370 | None:intergenic | 30.0% | |
| CAAAGATCTATTATGAGTAG+TGG | - | chr5_2:24169349-24169368 | Msa0764310:intron | 30.0% | |
| TAGTGGTTGGAAAATATTCA+GGG | - | chr5_2:24169366-24169385 | Msa0764310:intron | 30.0% | |
| GAAAAACCTGGTAATTTCTT+AGG | + | chr5_2:24169496-24169515 | None:intergenic | 30.0% | |
| GAAAGAAAGAAAGAAAAACC+TGG | + | chr5_2:24169508-24169527 | None:intergenic | 30.0% | |
| !!! | CCCTTTTTTATAACATGTCA+TGG | + | chr5_2:24169626-24169645 | None:intergenic | 30.0% |
| TATAAAAAAGGGGTCTCTTA+TGG | - | chr5_2:24169634-24169653 | Msa0764310:intron | 30.0% | |
| CTTGTAAAGAAGAAAGACAT+TGG | - | chr5_2:24169664-24169683 | Msa0764310:intron | 30.0% | |
| TGTAAAGAAGAAAGACATTG+GGG | - | chr5_2:24169666-24169685 | Msa0764310:intron | 30.0% | |
| ! | CCCTCAAGAAAATTTTCTTT+TGG | + | chr5_2:24169712-24169731 | None:intergenic | 30.0% |
| ! | AATTGTTTAGGTTTAGGTGT+AGG | - | chr5_2:24170114-24170133 | Msa0764310:intron | 30.0% |
| !! | GTAGGTTTTGATGATAGTTT+AGG | - | chr5_2:24170132-24170151 | Msa0764310:CDS | 30.0% |
| ! | GTAGGTTTTTGTGATAGTTT+AGG | - | chr5_2:24170193-24170212 | Msa0764310:CDS | 30.0% |
| ! | GATAGTTTAGGTTTAGGTTT+AGG | - | chr5_2:24170205-24170224 | Msa0764310:intron | 30.0% |
| AACAAAGCAATCTCAAAGAA+AGG | - | chr5_2:24168576-24168595 | Msa0764310:intron | 30.0% | |
| ACAAAGCAATCTCAAAGAAA+GGG | - | chr5_2:24168577-24168596 | Msa0764310:intron | 30.0% | |
| AAGAAAGGGAAAAAGAAAAG+TGG | - | chr5_2:24168591-24168610 | Msa0764310:intron | 30.0% | |
| AGAAAGGGAAAAAGAAAAGT+GGG | - | chr5_2:24168592-24168611 | Msa0764310:intron | 30.0% | |
| ! | GAAAAATCACCTGAGAATTT+TGG | + | chr5_2:24168640-24168659 | None:intergenic | 30.0% |
| ! | CTAAAACTGCTTCTCATTTT+AGG | + | chr5_2:24168865-24168884 | None:intergenic | 30.0% |
| TATTACTACCTGCAAAGTTT+AGG | + | chr5_2:24169031-24169050 | None:intergenic | 30.0% | |
| AGGTAGTAATAAAATAGCCA+TGG | - | chr5_2:24169040-24169059 | Msa0764310:intron | 30.0% | |
| TAATAAAATAGCCATGGTGA+AGG | - | chr5_2:24169046-24169065 | Msa0764310:intron | 30.0% | |
| ACTTACCAAATTATAGCCAT+TGG | + | chr5_2:24169147-24169166 | None:intergenic | 30.0% | |
| TGTTCTCTTGAAAACTTACT+TGG | + | chr5_2:24169244-24169263 | None:intergenic | 30.0% | |
| !! | GAACACTTGATGGATTATAA+AGG | - | chr5_2:24169259-24169278 | Msa0764310:intron | 30.0% |
| CACTACTCATAATAGATCTT+TGG | + | chr5_2:24169351-24169370 | None:intergenic | 30.0% | |
| CAAAGATCTATTATGAGTAG+TGG | - | chr5_2:24169349-24169368 | Msa0764310:intron | 30.0% | |
| TAGTGGTTGGAAAATATTCA+GGG | - | chr5_2:24169366-24169385 | Msa0764310:intron | 30.0% | |
| GAAAAACCTGGTAATTTCTT+AGG | + | chr5_2:24169496-24169515 | None:intergenic | 30.0% | |
| GAAAGAAAGAAAGAAAAACC+TGG | + | chr5_2:24169508-24169527 | None:intergenic | 30.0% | |
| !!! | CCCTTTTTTATAACATGTCA+TGG | + | chr5_2:24169626-24169645 | None:intergenic | 30.0% |
| TATAAAAAAGGGGTCTCTTA+TGG | - | chr5_2:24169634-24169653 | Msa0764310:intron | 30.0% | |
| CTTGTAAAGAAGAAAGACAT+TGG | - | chr5_2:24169664-24169683 | Msa0764310:intron | 30.0% | |
| TGTAAAGAAGAAAGACATTG+GGG | - | chr5_2:24169666-24169685 | Msa0764310:intron | 30.0% | |
| ! | CCCTCAAGAAAATTTTCTTT+TGG | + | chr5_2:24169712-24169731 | None:intergenic | 30.0% |
| ! | AATTGTTTAGGTTTAGGTGT+AGG | - | chr5_2:24170114-24170133 | Msa0764310:intron | 30.0% |
| !! | GTAGGTTTTGATGATAGTTT+AGG | - | chr5_2:24170132-24170151 | Msa0764310:CDS | 30.0% |
| ! | GTAGGTTTTTGTGATAGTTT+AGG | - | chr5_2:24170193-24170212 | Msa0764310:CDS | 30.0% |
| ! | GATAGTTTAGGTTTAGGTTT+AGG | - | chr5_2:24170205-24170224 | Msa0764310:intron | 30.0% |
| ATGAAGAGAGTGATGAATTG+AGG | - | chr5_2:24168527-24168546 | Msa0764310:intron | 35.0% | |
| TGAAGAGAGTGATGAATTGA+GGG | - | chr5_2:24168528-24168547 | Msa0764310:intron | 35.0% | |
| !!! | ATCACCTGAGAATTTTGGTT+GGG | + | chr5_2:24168635-24168654 | None:intergenic | 35.0% |
| !! | AATCACCTGAGAATTTTGGT+TGG | + | chr5_2:24168636-24168655 | None:intergenic | 35.0% |
| AGTTAATGCCTAAACTTTGC+AGG | - | chr5_2:24169020-24169039 | Msa0764310:intron | 35.0% | |
| CATTAACAGTTCCAGATGTT+GGG | + | chr5_2:24169085-24169104 | None:intergenic | 35.0% | |
| TCATTAACAGTTCCAGATGT+TGG | + | chr5_2:24169086-24169105 | None:intergenic | 35.0% | |
| TAACGCCAATGGCTATAATT+TGG | - | chr5_2:24169139-24169158 | Msa0764310:intron | 35.0% | |
| !! | GTTTTCAAGAGAACACTTGA+TGG | - | chr5_2:24169249-24169268 | Msa0764310:intron | 35.0% |
| !! | AATATGGGTTGGTAAGGAAA+TGG | - | chr5_2:24169291-24169310 | Msa0764310:intron | 35.0% |
| ACTCATAATAGATCTTTGGC+AGG | + | chr5_2:24169347-24169366 | None:intergenic | 35.0% | |
| GATCTATTATGAGTAGTGGT+TGG | - | chr5_2:24169353-24169372 | Msa0764310:intron | 35.0% | |
| GTAGTGGTTGGAAAATATTC+AGG | - | chr5_2:24169365-24169384 | Msa0764310:intron | 35.0% | |
| ATAGTAACAGTGAATGATGC+AGG | + | chr5_2:24169448-24169467 | None:intergenic | 35.0% | |
| TTCACTGTTACTATTACTCG+TGG | - | chr5_2:24169454-24169473 | Msa0764310:intron | 35.0% | |
| ATGTCTCAGAATCAGAATCA+GGG | - | chr5_2:24170299-24170318 | Msa0764310:intron | 35.0% | |
| AAGAAAAATCGCCTATGACA+TGG | - | chr5_2:24170348-24170367 | Msa0764310:intron | 35.0% | |
| ! | TGATGGTTCTGTCAAAAAGA+AGG | - | chr5_2:24170385-24170404 | Msa0764310:intron | 35.0% |
| TGTCAAAAAGAAGGATTCCA+AGG | - | chr5_2:24170394-24170413 | Msa0764310:intron | 35.0% | |
| AAAGAAGGATTCCAAGGTAA+CGG | - | chr5_2:24170400-24170419 | Msa0764310:intron | 35.0% | |
| TGTGTTTATGCATGTACAGA+AGG | - | chr5_2:24170763-24170782 | Msa0764310:CDS | 35.0% | |
| TCTTCACCAAAACCATCAAT+GGG | + | chr5_2:24170810-24170829 | None:intergenic | 35.0% | |
| TTCTTCACCAAAACCATCAA+TGG | + | chr5_2:24170811-24170830 | None:intergenic | 35.0% | |
| ATGAAGAGAGTGATGAATTG+AGG | - | chr5_2:24168527-24168546 | Msa0764310:intron | 35.0% | |
| TGAAGAGAGTGATGAATTGA+GGG | - | chr5_2:24168528-24168547 | Msa0764310:intron | 35.0% | |
| !!! | ATCACCTGAGAATTTTGGTT+GGG | + | chr5_2:24168635-24168654 | None:intergenic | 35.0% |
| !! | AATCACCTGAGAATTTTGGT+TGG | + | chr5_2:24168636-24168655 | None:intergenic | 35.0% |
| AGTTAATGCCTAAACTTTGC+AGG | - | chr5_2:24169020-24169039 | Msa0764310:intron | 35.0% | |
| CATTAACAGTTCCAGATGTT+GGG | + | chr5_2:24169085-24169104 | None:intergenic | 35.0% | |
| TCATTAACAGTTCCAGATGT+TGG | + | chr5_2:24169086-24169105 | None:intergenic | 35.0% | |
| TAACGCCAATGGCTATAATT+TGG | - | chr5_2:24169139-24169158 | Msa0764310:intron | 35.0% | |
| !! | GTTTTCAAGAGAACACTTGA+TGG | - | chr5_2:24169249-24169268 | Msa0764310:intron | 35.0% |
| !! | AATATGGGTTGGTAAGGAAA+TGG | - | chr5_2:24169291-24169310 | Msa0764310:intron | 35.0% |
| ACTCATAATAGATCTTTGGC+AGG | + | chr5_2:24169347-24169366 | None:intergenic | 35.0% | |
| GATCTATTATGAGTAGTGGT+TGG | - | chr5_2:24169353-24169372 | Msa0764310:intron | 35.0% | |
| GTAGTGGTTGGAAAATATTC+AGG | - | chr5_2:24169365-24169384 | Msa0764310:intron | 35.0% | |
| ATAGTAACAGTGAATGATGC+AGG | + | chr5_2:24169448-24169467 | None:intergenic | 35.0% | |
| TTCACTGTTACTATTACTCG+TGG | - | chr5_2:24169454-24169473 | Msa0764310:intron | 35.0% | |
| ATGTCTCAGAATCAGAATCA+GGG | - | chr5_2:24170299-24170318 | Msa0764310:intron | 35.0% | |
| AAGAAAAATCGCCTATGACA+TGG | - | chr5_2:24170348-24170367 | Msa0764310:intron | 35.0% | |
| ! | TGATGGTTCTGTCAAAAAGA+AGG | - | chr5_2:24170385-24170404 | Msa0764310:intron | 35.0% |
| TGTCAAAAAGAAGGATTCCA+AGG | - | chr5_2:24170394-24170413 | Msa0764310:intron | 35.0% | |
| AAAGAAGGATTCCAAGGTAA+CGG | - | chr5_2:24170400-24170419 | Msa0764310:intron | 35.0% | |
| TGTGTTTATGCATGTACAGA+AGG | - | chr5_2:24170763-24170782 | Msa0764310:CDS | 35.0% | |
| TCTTCACCAAAACCATCAAT+GGG | + | chr5_2:24170810-24170829 | None:intergenic | 35.0% | |
| TTCTTCACCAAAACCATCAA+TGG | + | chr5_2:24170811-24170830 | None:intergenic | 35.0% | |
| ACTACCCAACCAAAATTCTC+AGG | - | chr5_2:24168628-24168647 | Msa0764310:intron | 40.0% | |
| TAAAATAGCCATGGTGAAGG+CGG | - | chr5_2:24169049-24169068 | Msa0764310:intron | 40.0% | |
| GCTAGAAAATACCCAACATC+TGG | - | chr5_2:24169071-24169090 | Msa0764310:intron | 40.0% | |
| TTGTCACATCATAACGCCAA+TGG | - | chr5_2:24169128-24169147 | Msa0764310:intron | 40.0% | |
| ATAAAGGGCCTGCAACAATA+TGG | - | chr5_2:24169275-24169294 | Msa0764310:intron | 40.0% | |
| TAAAGGGCCTGCAACAATAT+GGG | - | chr5_2:24169276-24169295 | Msa0764310:intron | 40.0% | |
| TTACCAACCCATATTGTTGC+AGG | + | chr5_2:24169286-24169305 | None:intergenic | 40.0% | |
| !! | TGCAACAATATGGGTTGGTA+AGG | - | chr5_2:24169285-24169304 | Msa0764310:intron | 40.0% |
| ACTATTACTCGTGGCAGAAA+TGG | - | chr5_2:24169463-24169482 | Msa0764310:intron | 40.0% | |
| ACATTGGGGAAACTTCTTCT+AGG | - | chr5_2:24169680-24169699 | Msa0764310:intron | 40.0% | |
| CATGTCTCAGAATCAGAATC+AGG | - | chr5_2:24170298-24170317 | Msa0764310:intron | 40.0% | |
| GATGAAGCATAACCCATTGA+TGG | - | chr5_2:24170795-24170814 | Msa0764310:CDS | 40.0% | |
| !! | GCATAACCCATTGATGGTTT+TGG | - | chr5_2:24170801-24170820 | Msa0764310:CDS | 40.0% |
| ACTACCCAACCAAAATTCTC+AGG | - | chr5_2:24168628-24168647 | Msa0764310:intron | 40.0% | |
| TAAAATAGCCATGGTGAAGG+CGG | - | chr5_2:24169049-24169068 | Msa0764310:intron | 40.0% | |
| GCTAGAAAATACCCAACATC+TGG | - | chr5_2:24169071-24169090 | Msa0764310:intron | 40.0% | |
| TTGTCACATCATAACGCCAA+TGG | - | chr5_2:24169128-24169147 | Msa0764310:intron | 40.0% | |
| ATAAAGGGCCTGCAACAATA+TGG | - | chr5_2:24169275-24169294 | Msa0764310:intron | 40.0% | |
| TAAAGGGCCTGCAACAATAT+GGG | - | chr5_2:24169276-24169295 | Msa0764310:intron | 40.0% | |
| TTACCAACCCATATTGTTGC+AGG | + | chr5_2:24169286-24169305 | None:intergenic | 40.0% | |
| !! | TGCAACAATATGGGTTGGTA+AGG | - | chr5_2:24169285-24169304 | Msa0764310:intron | 40.0% |
| ACTATTACTCGTGGCAGAAA+TGG | - | chr5_2:24169463-24169482 | Msa0764310:intron | 40.0% | |
| ACATTGGGGAAACTTCTTCT+AGG | - | chr5_2:24169680-24169699 | Msa0764310:intron | 40.0% | |
| CATGTCTCAGAATCAGAATC+AGG | - | chr5_2:24170298-24170317 | Msa0764310:intron | 40.0% | |
| GATGAAGCATAACCCATTGA+TGG | - | chr5_2:24170795-24170814 | Msa0764310:CDS | 40.0% | |
| !! | GCATAACCCATTGATGGTTT+TGG | - | chr5_2:24170801-24170820 | Msa0764310:CDS | 40.0% |
| CCTGGTAATTTCTTAGGGCT+TGG | + | chr5_2:24169490-24169509 | None:intergenic | 45.0% | |
| CCAAGCCCTAAGAAATTACC+AGG | - | chr5_2:24169487-24169506 | Msa0764310:intron | 45.0% | |
| TCAGAATCAGGGTAACGTTC+AGG | - | chr5_2:24170310-24170329 | Msa0764310:intron | 45.0% | |
| CAGAATCAGGGTAACGTTCA+GGG | - | chr5_2:24170311-24170330 | Msa0764310:intron | 45.0% | |
| GTGATTCTGTGCCATGTCAT+AGG | + | chr5_2:24170362-24170381 | None:intergenic | 45.0% | |
| TGGCACAGAATCACATGTGA+TGG | - | chr5_2:24170368-24170387 | Msa0764310:intron | 45.0% | |
| CTGATTGTACACCGTTACCT+TGG | + | chr5_2:24170414-24170433 | None:intergenic | 45.0% | |
| TAACGGTGTACAATCAGACG+AGG | - | chr5_2:24170417-24170436 | Msa0764310:intron | 45.0% | |
| TGTACAATCAGACGAGGTTG+AGG | - | chr5_2:24170423-24170442 | Msa0764310:intron | 45.0% | |
| ATCGGGAGGACATACTACTT+TGG | - | chr5_2:24170449-24170468 | Msa0764310:intron | 45.0% | |
| TTTGGTCCTCAACCAAAAGC+AGG | - | chr5_2:24170467-24170486 | Msa0764310:intron | 45.0% | |
| CCTGGTAATTTCTTAGGGCT+TGG | + | chr5_2:24169490-24169509 | None:intergenic | 45.0% | |
| CCAAGCCCTAAGAAATTACC+AGG | - | chr5_2:24169487-24169506 | Msa0764310:intron | 45.0% | |
| TCAGAATCAGGGTAACGTTC+AGG | - | chr5_2:24170310-24170329 | Msa0764310:intron | 45.0% | |
| CAGAATCAGGGTAACGTTCA+GGG | - | chr5_2:24170311-24170330 | Msa0764310:intron | 45.0% | |
| GTGATTCTGTGCCATGTCAT+AGG | + | chr5_2:24170362-24170381 | None:intergenic | 45.0% | |
| TGGCACAGAATCACATGTGA+TGG | - | chr5_2:24170368-24170387 | Msa0764310:intron | 45.0% | |
| CTGATTGTACACCGTTACCT+TGG | + | chr5_2:24170414-24170433 | None:intergenic | 45.0% | |
| TAACGGTGTACAATCAGACG+AGG | - | chr5_2:24170417-24170436 | Msa0764310:intron | 45.0% | |
| TGTACAATCAGACGAGGTTG+AGG | - | chr5_2:24170423-24170442 | Msa0764310:intron | 45.0% | |
| ATCGGGAGGACATACTACTT+TGG | - | chr5_2:24170449-24170468 | Msa0764310:intron | 45.0% | |
| TTTGGTCCTCAACCAAAAGC+AGG | - | chr5_2:24170467-24170486 | Msa0764310:intron | 45.0% | |
| !!! | TATGATAAAAAAATTATTTT+TGG | - | chr5_2:24168947-24168966 | Msa0764310:intron | 5.0% |
| !!! | TATGATAAAAAAATTATTTT+TGG | - | chr5_2:24168947-24168966 | Msa0764310:intron | 5.0% |
| ! | GGTGCTGAAGACACAGAAGA+AGG | - | chr5_2:24168499-24168518 | Msa0764310:intron | 50.0% |
| GAGGGATGAGAGTTCATACG+AGG | - | chr5_2:24168546-24168565 | Msa0764310:intron | 50.0% | |
| !! | TTTTCTAGCCGCCTTCACCA+TGG | + | chr5_2:24169060-24169079 | None:intergenic | 50.0% |
| !! | GGTTGGTAAGGAAATGGCTG+TGG | - | chr5_2:24169297-24169316 | Msa0764310:intron | 50.0% |
| AATGGCTGTGGAAGTGAGCT+TGG | - | chr5_2:24169309-24169328 | Msa0764310:intron | 50.0% | |
| ATGGCTGTGGAAGTGAGCTT+GGG | - | chr5_2:24169310-24169329 | Msa0764310:intron | 50.0% | |
| ACAATCAGACGAGGTTGAGG+AGG | - | chr5_2:24170426-24170445 | Msa0764310:intron | 50.0% | |
| ! | GGTGCTGAAGACACAGAAGA+AGG | - | chr5_2:24168499-24168518 | Msa0764310:intron | 50.0% |
| GAGGGATGAGAGTTCATACG+AGG | - | chr5_2:24168546-24168565 | Msa0764310:intron | 50.0% | |
| !! | TTTTCTAGCCGCCTTCACCA+TGG | + | chr5_2:24169060-24169079 | None:intergenic | 50.0% |
| !! | GGTTGGTAAGGAAATGGCTG+TGG | - | chr5_2:24169297-24169316 | Msa0764310:intron | 50.0% |
| AATGGCTGTGGAAGTGAGCT+TGG | - | chr5_2:24169309-24169328 | Msa0764310:intron | 50.0% | |
| ATGGCTGTGGAAGTGAGCTT+GGG | - | chr5_2:24169310-24169329 | Msa0764310:intron | 50.0% | |
| ACAATCAGACGAGGTTGAGG+AGG | - | chr5_2:24170426-24170445 | Msa0764310:intron | 50.0% | |
| GGGCCTGCAACAATATGGGT+TGG | - | chr5_2:24169280-24169299 | Msa0764310:intron | 55.0% | |
| TGGCTGTGGAAGTGAGCTTG+GGG | - | chr5_2:24169311-24169330 | Msa0764310:intron | 55.0% | |
| CAGACGAGGTTGAGGAGGAT+CGG | - | chr5_2:24170431-24170450 | Msa0764310:intron | 55.0% | |
| AGACGAGGTTGAGGAGGATC+GGG | - | chr5_2:24170432-24170451 | Msa0764310:intron | 55.0% | |
| ! | AACCAAAAGCAGGTGCCGCA+GGG | - | chr5_2:24170477-24170496 | Msa0764310:intron | 55.0% |
| GGGCCTGCAACAATATGGGT+TGG | - | chr5_2:24169280-24169299 | Msa0764310:intron | 55.0% | |
| TGGCTGTGGAAGTGAGCTTG+GGG | - | chr5_2:24169311-24169330 | Msa0764310:intron | 55.0% | |
| CAGACGAGGTTGAGGAGGAT+CGG | - | chr5_2:24170431-24170450 | Msa0764310:intron | 55.0% | |
| AGACGAGGTTGAGGAGGATC+GGG | - | chr5_2:24170432-24170451 | Msa0764310:intron | 55.0% | |
| ! | AACCAAAAGCAGGTGCCGCA+GGG | - | chr5_2:24170477-24170496 | Msa0764310:intron | 55.0% |
| !! | GCGGCACCTGCTTTTGGTTG+AGG | + | chr5_2:24170476-24170495 | None:intergenic | 60.0% |
| ! | CAACCAAAAGCAGGTGCCGC+AGG | - | chr5_2:24170476-24170495 | Msa0764310:intron | 60.0% |
| GTTGCCTGCTACAGTCCCTG+CGG | + | chr5_2:24170495-24170514 | None:intergenic | 60.0% | |
| !! | GCGGCACCTGCTTTTGGTTG+AGG | + | chr5_2:24170476-24170495 | None:intergenic | 60.0% |
| ! | CAACCAAAAGCAGGTGCCGC+AGG | - | chr5_2:24170476-24170495 | Msa0764310:intron | 60.0% |
| GTTGCCTGCTACAGTCCCTG+CGG | + | chr5_2:24170495-24170514 | None:intergenic | 60.0% | |
| CGAGGTTGAGGAGGATCGGG+AGG | - | chr5_2:24170435-24170454 | Msa0764310:intron | 65.0% | |
| ! | GTCCCTGCGGCACCTGCTTT+TGG | + | chr5_2:24170482-24170501 | None:intergenic | 65.0% |
| CGAGGTTGAGGAGGATCGGG+AGG | - | chr5_2:24170435-24170454 | Msa0764310:intron | 65.0% | |
| ! | GTCCCTGCGGCACCTGCTTT+TGG | + | chr5_2:24170482-24170501 | None:intergenic | 65.0% |
| ! | GGTGCCGCAGGGACTGTAGC+AGG | - | chr5_2:24170488-24170507 | Msa0764310:intron | 70.0% |
| ! | GGTGCCGCAGGGACTGTAGC+AGG | - | chr5_2:24170488-24170507 | Msa0764310:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 24168442 | 24170846 | 24168442 | ID=Msa0764310;Name=Msa0764310 |
| chr5_2 | mRNA | 24168442 | 24170846 | 24168442 | ID=Msa0764310-mRNA-1;Parent=Msa0764310;Name=Msa0764310-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0|1|1|1|5|0|228 |
| chr5_2 | exon | 24170679 | 24170846 | 24170679 | ID=Msa0764310-mRNA-1:exon:9883;Parent=Msa0764310-mRNA-1 |
| chr5_2 | exon | 24170128 | 24170220 | 24170128 | ID=Msa0764310-mRNA-1:exon:9882;Parent=Msa0764310-mRNA-1 |
| chr5_2 | exon | 24169780 | 24170053 | 24169780 | ID=Msa0764310-mRNA-1:exon:9881;Parent=Msa0764310-mRNA-1 |
| chr5_2 | exon | 24169558 | 24169644 | 24169558 | ID=Msa0764310-mRNA-1:exon:9880;Parent=Msa0764310-mRNA-1 |
| chr5_2 | exon | 24168442 | 24168506 | 24168442 | ID=Msa0764310-mRNA-1:exon:9879;Parent=Msa0764310-mRNA-1 |
| chr5_2 | CDS | 24170679 | 24170846 | 24170679 | ID=Msa0764310-mRNA-1:cds;Parent=Msa0764310-mRNA-1 |
| chr5_2 | CDS | 24170128 | 24170220 | 24170128 | ID=Msa0764310-mRNA-1:cds;Parent=Msa0764310-mRNA-1 |
| chr5_2 | CDS | 24169780 | 24170053 | 24169780 | ID=Msa0764310-mRNA-1:cds;Parent=Msa0764310-mRNA-1 |
| chr5_2 | CDS | 24169558 | 24169644 | 24169558 | ID=Msa0764310-mRNA-1:cds;Parent=Msa0764310-mRNA-1 |
| chr5_2 | CDS | 24168442 | 24168506 | 24168442 | ID=Msa0764310-mRNA-1:cds;Parent=Msa0764310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
