Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764740 | G7KB45 | 58.915 | 129 | 45 | 4 | 1 | 126 | 1 | 124 | 7.00e-42 | 145 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0764740 | Msa1048220 | 0.802483 | 5.490850e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764740 | MtrunA17_Chr5g0416291 | 58.915 | 129 | 45 | 4 | 1 | 126 | 1 | 124 | 1.73e-45 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 70 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATCAATTTACAGTATA+TGG | 0.209050 | 5_2:-25149172 | Msa0764740:three_prime_UTR |
| GGTGTTTGGAAGGGTGGATT+GGG | 0.221439 | 5_2:-25152697 | Msa0764740:CDS |
| AGCACTACCTGGAAGAATTA+TGG | 0.279320 | 5_2:-25153107 | Msa0764740:CDS |
| AATGTTGGCACTGAGTTTCT+TGG | 0.293493 | 5_2:-25153079 | Msa0764740:CDS |
| ATATGATAAATTTGTTGATA+AGG | 0.342300 | 5_2:-25152477 | Msa0764740:CDS |
| AATGTCAAGGGCATGGTGTT+TGG | 0.354254 | 5_2:-25152711 | Msa0764740:CDS |
| CTCATAGCACCACCGGAGTC+AGG | 0.356778 | 5_2:-25149397 | Msa0764740:three_prime_UTR |
| TGCAATAACAGCAACATTCC+TGG | 0.367285 | 5_2:+25152849 | None:intergenic |
| TGGTGTTTGGAAGGGTGGAT+TGG | 0.370893 | 5_2:-25152698 | Msa0764740:CDS |
| TGGAAGGGTGGATTGGGGCT+TGG | 0.375458 | 5_2:-25152691 | Msa0764740:CDS |
| GCACTACCTGGAAGAATTAT+GGG | 0.386592 | 5_2:-25153106 | Msa0764740:CDS |
| AGGAGGAGCTGTCGAAGAAA+GGG | 0.400240 | 5_2:-25152429 | Msa0764740:CDS |
| ACTTATCATTCAAGGGTATA+CGG | 0.401261 | 5_2:+25152881 | None:intergenic |
| CTCTCCAGACTTATCATTCA+AGG | 0.408902 | 5_2:+25152873 | None:intergenic |
| TCGCTGCTTCCTTATCGATC+AGG | 0.414394 | 5_2:-25153655 | Msa0764740:intron |
| GCAAGCACTTAAGAATTTCA+AGG | 0.420865 | 5_2:-25149210 | Msa0764740:three_prime_UTR |
| AAAATTGAAACAGCTGCTTA+GGG | 0.445247 | 5_2:+25153137 | None:intergenic |
| AAGGAGGAGCTGTCGAAGAA+AGG | 0.449362 | 5_2:-25152430 | Msa0764740:CDS |
| ATCTACCATCATGTTTGCTT+AGG | 0.461530 | 5_2:+25149306 | None:intergenic |
| AAATTTGTTGATAAGGATAC+GGG | 0.464282 | 5_2:-25152470 | Msa0764740:CDS |
| AATTTGCAATTCCTTCAATA+CGG | 0.464945 | 5_2:+25149139 | None:intergenic |
| TAAATTTGTTGATAAGGATA+CGG | 0.464994 | 5_2:-25152471 | Msa0764740:CDS |
| GCACCACCGGAGTCAGGGGC+TGG | 0.465691 | 5_2:-25149391 | Msa0764740:three_prime_UTR |
| GTGGATTGGGGCTTGGACGT+TGG | 0.468544 | 5_2:-25152684 | Msa0764740:CDS |
| TGATAAGGATACGGGCTTTG+AGG | 0.471213 | 5_2:-25152462 | Msa0764740:CDS |
| ATACCCTTGAATGATAAGTC+TGG | 0.475435 | 5_2:-25152877 | Msa0764740:CDS |
| GAATAGCGGCGGTGCTCAAA+AGG | 0.477894 | 5_2:+25153710 | None:intergenic |
| TTAATTAATTATAGGTTGAT+CGG | 0.486328 | 5_2:-25152737 | Msa0764740:intron |
| TCATAGCACCACCGGAGTCA+GGG | 0.494698 | 5_2:-25149396 | Msa0764740:three_prime_UTR |
| GTAGCATGCAACCGTATTGA+AGG | 0.505094 | 5_2:-25149150 | Msa0764740:three_prime_UTR |
| GGGCATGGTGTTTGGAAGGG+TGG | 0.505443 | 5_2:-25152703 | Msa0764740:CDS |
| TACAACATACATCGGAAGAC+AGG | 0.510759 | 5_2:+25152643 | None:intergenic |
| CTTCCTTGTTAACGATATCC+AGG | 0.514541 | 5_2:+25149425 | None:intergenic |
| GAAGACAGGGGACAACCATC+AGG | 0.514721 | 5_2:+25152657 | None:intergenic |
| TTCAAAAGGTGATGCGGCAG+CGG | 0.519447 | 5_2:+25153678 | None:intergenic |
| AGGTTCAAACCTGATCGATA+AGG | 0.544804 | 5_2:+25153646 | None:intergenic |
| AATTGAAACAGCTGCTTAGG+GGG | 0.546328 | 5_2:+25153139 | None:intergenic |
| GTGTTTGGAAGGGTGGATTG+GGG | 0.548484 | 5_2:-25152696 | Msa0764740:CDS |
| TCAAGGGCATGGTGTTTGGA+AGG | 0.557029 | 5_2:-25152707 | Msa0764740:CDS |
| TAAGGAAGCAGCGATTCAAA+AGG | 0.557977 | 5_2:+25153664 | None:intergenic |
| GCAATAACAGCAACATTCCT+GGG | 0.564439 | 5_2:+25152850 | None:intergenic |
| ACAACATACATCGGAAGACA+GGG | 0.573716 | 5_2:+25152644 | None:intergenic |
| TGCATCTGAAATCAAGCAGA+TGG | 0.583043 | 5_2:-25152830 | Msa0764740:intron |
| ACTTACATGGAGAATAAGCT+CGG | 0.590061 | 5_2:+25152390 | None:intergenic |
| CATAGCACCACCGGAGTCAG+GGG | 0.591057 | 5_2:-25149395 | Msa0764740:three_prime_UTR |
| CAAGGGCATGGTGTTTGGAA+GGG | 0.600185 | 5_2:-25152706 | Msa0764740:CDS |
| GGCTTTGAGGTACACGGAGA+AGG | 0.600510 | 5_2:-25152449 | Msa0764740:CDS |
| TCTCCAGACTTATCATTCAA+GGG | 0.611705 | 5_2:+25152874 | None:intergenic |
| AGTCTAGCTCATAGCACCAC+CGG | 0.613408 | 5_2:-25149404 | Msa0764740:three_prime_UTR |
| TCGGAACAATGTCAAGGGCA+TGG | 0.615844 | 5_2:-25152718 | Msa0764740:CDS |
| CACTACCTGGAAGAATTATG+GGG | 0.619081 | 5_2:-25153105 | Msa0764740:CDS |
| TTGGACGTTGGACAGCCTGA+TGG | 0.621618 | 5_2:-25152672 | Msa0764740:CDS |
| GGTTGATCGGAACAATGTCA+AGG | 0.623701 | 5_2:-25152724 | Msa0764740:CDS |
| AGCGGCGGTGCTCAAAAGGA+AGG | 0.624958 | 5_2:+25153714 | None:intergenic |
| GGAGGAGCTGTCGAAGAAAG+GGG | 0.626673 | 5_2:-25152428 | Msa0764740:CDS |
| ATGATAAGTCTGGAGAGCCC+AGG | 0.630502 | 5_2:-25152867 | Msa0764740:CDS |
| CAGCGATTCAAAAGGTGATG+CGG | 0.631255 | 5_2:+25153672 | None:intergenic |
| TTTAACCTAAGCAAACATGA+TGG | 0.631902 | 5_2:-25149311 | Msa0764740:three_prime_UTR |
| AAATTGAAACAGCTGCTTAG+GGG | 0.632277 | 5_2:+25153138 | None:intergenic |
| GTTGATCGGAACAATGTCAA+GGG | 0.639957 | 5_2:-25152723 | Msa0764740:CDS |
| AGATTTGGAGAGGAAACTCA+AGG | 0.640468 | 5_2:-25153044 | Msa0764740:CDS |
| TTTGAGGTACACGGAGAAGG+AGG | 0.642184 | 5_2:-25152446 | Msa0764740:CDS |
| ATGATGGTAGATGTGAATGA+TGG | 0.644023 | 5_2:-25149295 | Msa0764740:three_prime_UTR |
| GTACCTGGATATCGTTAACA+AGG | 0.646230 | 5_2:-25149428 | Msa0764740:three_prime_UTR |
| GATTAAATCACTACATACAG+AGG | 0.683744 | 5_2:+25149263 | None:intergenic |
| GATACGGGCTTTGAGGTACA+CGG | 0.693096 | 5_2:-25152455 | Msa0764740:CDS |
| AGCGGTACTCAAGAGAATAG+CGG | 0.709939 | 5_2:+25153696 | None:intergenic |
| CAACATACATCGGAAGACAG+GGG | 0.723782 | 5_2:+25152645 | None:intergenic |
| ACTACCTGGAAGAATTATGG+GGG | 0.736339 | 5_2:-25153104 | Msa0764740:CDS |
| GGTACTCAAGAGAATAGCGG+CGG | 0.739392 | 5_2:+25153699 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAATTAAATTAATA+CGG | - | chr5_2:25151929-25151948 | Msa0764740:intron | 0.0% |
| !! | AAAAAAACTAAAACATTAAT+AGG | - | chr5_2:25149901-25149920 | Msa0764740:intron | 10.0% |
| !! | AAAAAACTAAAACATTAATA+GGG | - | chr5_2:25149902-25149921 | Msa0764740:intron | 10.0% |
| !! | TTAATTAAAATGAAAATGAT+TGG | + | chr5_2:25150076-25150095 | None:intergenic | 10.0% |
| !!! | TTAATTAATTATAGGTTGAT+CGG | - | chr5_2:25150088-25150107 | Msa0764740:intron | 15.0% |
| !!! | ATATGATAAATTTGTTGATA+AGG | - | chr5_2:25150348-25150367 | Msa0764740:intron | 15.0% |
| !!! | TATTTATTTTGGGTTTAATT+TGG | - | chr5_2:25150735-25150754 | Msa0764740:intron | 15.0% |
| !! | CTTCAAAAAAATAAAAAGAT+GGG | - | chr5_2:25150841-25150860 | Msa0764740:intron | 15.0% |
| !!! | AATTTGAATCTTTTATTTAC+TGG | - | chr5_2:25151226-25151245 | Msa0764740:intron | 15.0% |
| !!! | ATTTGAATCTTTTATTTACT+GGG | - | chr5_2:25151227-25151246 | Msa0764740:intron | 15.0% |
| !!! | ATTTTTTATTCAGATATGAA+GGG | + | chr5_2:25151919-25151938 | None:intergenic | 15.0% |
| !!! | AATTTTTTATTCAGATATGA+AGG | + | chr5_2:25151920-25151939 | None:intergenic | 15.0% |
| !!! | TATATTTTTGAAATTTTGGA+AGG | + | chr5_2:25152454-25152473 | None:intergenic | 15.0% |
| !! | ATATAGTAAACTAATATTGA+AGG | - | chr5_2:25153132-25153151 | Msa0764740:CDS | 15.0% |
| !! | TGAAATAACATCTAAAAAAA+TGG | - | chr5_2:25153228-25153247 | Msa0764740:intron | 15.0% |
| !! | ATTAAACATACAACATACAT+CGG | + | chr5_2:25150193-25150212 | None:intergenic | 20.0% |
| !!! | TAAATTTGTTGATAAGGATA+CGG | - | chr5_2:25150354-25150373 | Msa0764740:intron | 20.0% |
| !! | AAATTTACCAAAAACTTACA+TGG | + | chr5_2:25150451-25150470 | None:intergenic | 20.0% |
| !!! | TGTGGAGTTTTATTTATTTT+GGG | - | chr5_2:25150725-25150744 | Msa0764740:intron | 20.0% |
| !! | GCTTCAAAAAAATAAAAAGA+TGG | - | chr5_2:25150840-25150859 | Msa0764740:intron | 20.0% |
| !! | CAAGCTAAATAAGAAAAATT+TGG | - | chr5_2:25151002-25151021 | Msa0764740:intron | 20.0% |
| !!! | AAAAACGTAAAAATTTCTAG+AGG | + | chr5_2:25151161-25151180 | None:intergenic | 20.0% |
| !!! | TCTAAAACCTTTGATATAAA+TGG | - | chr5_2:25151203-25151222 | Msa0764740:intron | 20.0% |
| !! | TCAAATTCCATTTATATCAA+AGG | + | chr5_2:25151213-25151232 | None:intergenic | 20.0% |
| !!! | AATCAAGTGTATTTGATTTA+CGG | - | chr5_2:25151534-25151553 | Msa0764740:intron | 20.0% |
| !!! | AAAGAAAATTGATTGATAGT+TGG | - | chr5_2:25151733-25151752 | Msa0764740:intron | 20.0% |
| !!! | TTTTTTATTCAGATATGAAG+GGG | + | chr5_2:25151918-25151937 | None:intergenic | 20.0% |
| !!! | AACTCATCTTTTGTAATTTA+TGG | - | chr5_2:25152340-25152359 | Msa0764740:intron | 20.0% |
| !!! | ACTCATCTTTTGTAATTTAT+GGG | - | chr5_2:25152341-25152360 | Msa0764740:intron | 20.0% |
| !!! | GTTTTTATTTCCAAGAAAAT+GGG | + | chr5_2:25152912-25152931 | None:intergenic | 20.0% |
| !!! | TGTTTTTATTTCCAAGAAAA+TGG | + | chr5_2:25152913-25152932 | None:intergenic | 20.0% |
| !!! | TTTTCTTGGAAATAAAAACA+TGG | - | chr5_2:25152913-25152932 | Msa0764740:intron | 20.0% |
| !! | TTTCTTGGAAATAAAAACAT+GGG | - | chr5_2:25152914-25152933 | Msa0764740:intron | 20.0% |
| !! | AATATAGAAGTTACAAAGAA+GGG | + | chr5_2:25153017-25153036 | None:intergenic | 20.0% |
| !! | AAAAATGTCATGTTTAGTAA+GGG | + | chr5_2:25153076-25153095 | None:intergenic | 20.0% |
| !! | TAAAAATGTCATGTTTAGTA+AGG | + | chr5_2:25153077-25153096 | None:intergenic | 20.0% |
| !! | AGCTTATAAGCTATAAAAAA+TGG | - | chr5_2:25153105-25153124 | Msa0764740:CDS | 20.0% |
| !! | CTAATATTGAAGGTTAAAAT+TGG | - | chr5_2:25153142-25153161 | Msa0764740:CDS | 20.0% |
| ! | GAATCGAGATTTAAGAATTT+GGG | - | chr5_2:25149316-25149335 | Msa0764740:three_prime_UTR | 25.0% |
| ! | AATCGAGATTTAAGAATTTG+GGG | - | chr5_2:25149317-25149336 | Msa0764740:three_prime_UTR | 25.0% |
| ! | AGATCAACTTACTTTGTATT+TGG | + | chr5_2:25149459-25149478 | None:intergenic | 25.0% |
| ! | AACAAACTTAAAAGATATCC+AGG | + | chr5_2:25149513-25149532 | None:intergenic | 25.0% |
| ! | TTTCTTTGTATTGTACATGT+TGG | - | chr5_2:25149623-25149642 | Msa0764740:intron | 25.0% |
| ! | TACTTCATTGCCTATTTAAT+CGG | + | chr5_2:25149662-25149681 | None:intergenic | 25.0% |
| !! | TGTTATTGCATCTGAAATAA+AGG | - | chr5_2:25150048-25150067 | Msa0764740:intron | 25.0% |
| !!! | AAATTTGTTGATAAGGATAC+GGG | - | chr5_2:25150355-25150374 | Msa0764740:intron | 25.0% |
| !! | TTATTCTCCATGTAAGTTTT+TGG | - | chr5_2:25150441-25150460 | Msa0764740:intron | 25.0% |
| ! | TTTCTTCAATCCTTTATGTT+TGG | - | chr5_2:25150495-25150514 | Msa0764740:intron | 25.0% |
| !!! | AATCCTTTATGTTTGGTTTT+GGG | - | chr5_2:25150502-25150521 | Msa0764740:intron | 25.0% |
| !!! | GTGTGGAGTTTTATTTATTT+TGG | - | chr5_2:25150724-25150743 | Msa0764740:intron | 25.0% |
| ! | TATAAGGTTTCATTATCCAA+CGG | + | chr5_2:25151028-25151047 | None:intergenic | 25.0% |
| ! | AGTCTATGATAAGATCTATA+AGG | + | chr5_2:25151044-25151063 | None:intergenic | 25.0% |
| !! | TTCTCAAAAATCTTTTCACA+TGG | - | chr5_2:25151251-25151270 | Msa0764740:intron | 25.0% |
| ! | AGCATAAACTTAGAAAAGAA+TGG | + | chr5_2:25151297-25151316 | None:intergenic | 25.0% |
| ! | TTTAGAAACACATGAACAAT+TGG | - | chr5_2:25151337-25151356 | Msa0764740:intron | 25.0% |
| ! | TTTGATGAAAGTCAATGAAA+GGG | - | chr5_2:25151498-25151517 | Msa0764740:intron | 25.0% |
| !!! | ATCAATCTAATGGTTTTGAA+AGG | - | chr5_2:25151565-25151584 | Msa0764740:intron | 25.0% |
| ! | TAAATAAATCCCTAGAAAAG+TGG | + | chr5_2:25151683-25151702 | None:intergenic | 25.0% |
| !!! | CAACATTTTTGGTTTAATCT+GGG | + | chr5_2:25152010-25152029 | None:intergenic | 25.0% |
| !!! | TCAACATTTTTGGTTTAATC+TGG | + | chr5_2:25152011-25152030 | None:intergenic | 25.0% |
| ! | GAATAGAAAAATTGACAAAC+GGG | + | chr5_2:25152057-25152076 | None:intergenic | 25.0% |
| ! | CGAATAGAAAAATTGACAAA+CGG | + | chr5_2:25152058-25152077 | None:intergenic | 25.0% |
| !! | CGTTTGTCAATTTTTCTATT+CGG | - | chr5_2:25152056-25152075 | Msa0764740:intron | 25.0% |
| !! | GTTTGTCAATTTTTCTATTC+GGG | - | chr5_2:25152057-25152076 | Msa0764740:intron | 25.0% |
| !!! | AATTTTTCTATTCGGGTTTT+CGG | - | chr5_2:25152064-25152083 | Msa0764740:intron | 25.0% |
| !! | CTCATCTTTTGTAATTTATG+GGG | - | chr5_2:25152342-25152361 | Msa0764740:intron | 25.0% |
| ! | TTGTTCAAATATAAGAGGTA+GGG | + | chr5_2:25152546-25152565 | None:intergenic | 25.0% |
| ! | ATTGTTCAAATATAAGAGGT+AGG | + | chr5_2:25152547-25152566 | None:intergenic | 25.0% |
| ! | CAAGATTGTTCAAATATAAG+AGG | + | chr5_2:25152551-25152570 | None:intergenic | 25.0% |
| ! | CTCTTATATTTGAACAATCT+TGG | - | chr5_2:25152549-25152568 | Msa0764740:intron | 25.0% |
| !!! | TACTTTTCGAAAAAAGCATT+TGG | - | chr5_2:25152776-25152795 | Msa0764740:intron | 25.0% |
| ! | CCAAGTTTACAAATAATCAT+AGG | + | chr5_2:25152819-25152838 | None:intergenic | 25.0% |
| ! | CCTATGATTATTTGTAAACT+TGG | - | chr5_2:25152816-25152835 | Msa0764740:intron | 25.0% |
| ! | ATTTGTAAACTTGGAGAATA+TGG | - | chr5_2:25152825-25152844 | Msa0764740:intron | 25.0% |
| ! | TTTGTAAACTTGGAGAATAT+GGG | - | chr5_2:25152826-25152845 | Msa0764740:intron | 25.0% |
| ! | AGAATAAAATATTCCCATGA+AGG | + | chr5_2:25152887-25152906 | None:intergenic | 25.0% |
| ! | AATGTTAGGAAATTAATTCC+CGG | + | chr5_2:25152978-25152997 | None:intergenic | 25.0% |
| ! | GAATATAGAAGTTACAAAGA+AGG | + | chr5_2:25153018-25153037 | None:intergenic | 25.0% |
| !! | TGTGAATGATTTTTACAACT+AGG | - | chr5_2:25153039-25153058 | Msa0764740:CDS | 25.0% |
| ! | AAAATGTCATGTTTAGTAAG+GGG | + | chr5_2:25153075-25153094 | None:intergenic | 25.0% |
| ! | AAACAAAGAAGAATCAACAA+AGG | + | chr5_2:25153315-25153334 | None:intergenic | 25.0% |
| ! | TGCAATCAATTTACAGTATA+TGG | - | chr5_2:25153653-25153672 | Msa0764740:intron | 25.0% |
| ! | AATTTGCAATTCCTTCAATA+CGG | + | chr5_2:25153689-25153708 | None:intergenic | 25.0% |
| ! | AGCAGTTTAAAACCCTTAAT+AGG | - | chr5_2:25149272-25149291 | Msa0764740:three_prime_UTR | 30.0% |
| ! | GCAGTTTAAAACCCTTAATA+GGG | - | chr5_2:25149273-25149292 | Msa0764740:three_prime_UTR | 30.0% |
| TTAAAACCCTTAATAGGGTT+TGG | - | chr5_2:25149278-25149297 | Msa0764740:three_prime_UTR | 30.0% | |
| TAAAACCCTTAATAGGGTTT+GGG | - | chr5_2:25149279-25149298 | Msa0764740:three_prime_UTR | 30.0% | |
| GGAATCGAGATTTAAGAATT+TGG | - | chr5_2:25149315-25149334 | Msa0764740:three_prime_UTR | 30.0% | |
| ATCGAGATTTAAGAATTTGG+GGG | - | chr5_2:25149318-25149337 | Msa0764740:three_prime_UTR | 30.0% | |
| GAAAATGTGAAAGAATGAAG+AGG | - | chr5_2:25149340-25149359 | Msa0764740:three_prime_UTR | 30.0% | |
| CCTATTTAATCGGTAAACAA+AGG | + | chr5_2:25149652-25149671 | None:intergenic | 30.0% | |
| ! | CCTTTGTTTACCGATTAAAT+AGG | - | chr5_2:25149649-25149668 | Msa0764740:intron | 30.0% |
| AAAATTGAAACAGCTGCTTA+GGG | + | chr5_2:25149691-25149710 | None:intergenic | 30.0% | |
| AAAAATTGAAACAGCTGCTT+AGG | + | chr5_2:25149692-25149711 | None:intergenic | 30.0% | |
| ! | ACTTATCATTCAAGGGTATA+CGG | + | chr5_2:25149947-25149966 | None:intergenic | 30.0% |
| CTTCTTTACTTCTTGAAACT+AGG | + | chr5_2:25150278-25150297 | None:intergenic | 30.0% | |
| !! | TATTTGTTTTCTCGAGCTTT+TGG | + | chr5_2:25150306-25150325 | None:intergenic | 30.0% |
| !! | CAATCCTTTATGTTTGGTTT+TGG | - | chr5_2:25150501-25150520 | Msa0764740:intron | 30.0% |
| !!! | ATCCTTTATGTTTGGTTTTG+GGG | - | chr5_2:25150503-25150522 | Msa0764740:intron | 30.0% |
| ! | TTGAGTGTTGTGGAAATTTA+AGG | - | chr5_2:25150591-25150610 | Msa0764740:intron | 30.0% |
| !! | TTTCTTATTTAGCTTGCTCA+CGG | + | chr5_2:25150998-25151017 | None:intergenic | 30.0% |
| AATAAGAAAAATTTGGCCGT+TGG | - | chr5_2:25151009-25151028 | Msa0764740:intron | 30.0% | |
| AGTCCTATAGAGAGTTTATT+GGG | + | chr5_2:25151093-25151112 | None:intergenic | 30.0% | |
| AAGTCCTATAGAGAGTTTAT+TGG | + | chr5_2:25151094-25151113 | None:intergenic | 30.0% | |
| CTTTGATGAAAGTCAATGAA+AGG | - | chr5_2:25151497-25151516 | Msa0764740:intron | 30.0% | |
| GGTGTGTTTAATCAATCTAA+TGG | - | chr5_2:25151555-25151574 | Msa0764740:intron | 30.0% | |
| !! | ATGATGATTTCCACTTTTCT+AGG | - | chr5_2:25151670-25151689 | Msa0764740:intron | 30.0% |
| !! | TGATGATTTCCACTTTTCTA+GGG | - | chr5_2:25151671-25151690 | Msa0764740:intron | 30.0% |
| AAATTAATACGGGTCAGTTT+CGG | - | chr5_2:25151940-25151959 | Msa0764740:intron | 30.0% | |
| !! | ATTTTTCTATTCGGGTTTTC+GGG | - | chr5_2:25152065-25152084 | Msa0764740:intron | 30.0% |
| !! | AATTTTGAACAGACTAGCTA+GGG | + | chr5_2:25152120-25152139 | None:intergenic | 30.0% |
| !! | AAATTTTGAACAGACTAGCT+AGG | + | chr5_2:25152121-25152140 | None:intergenic | 30.0% |
| TTCCTTCATTGTACAAAATC+TGG | - | chr5_2:25152140-25152159 | Msa0764740:intron | 30.0% | |
| !! | TTTTGGAAGGTTGTTAATGT+GGG | + | chr5_2:25152441-25152460 | None:intergenic | 30.0% |
| !! | ATTTTGGAAGGTTGTTAATG+TGG | + | chr5_2:25152442-25152461 | None:intergenic | 30.0% |
| TGTTCAAATATAAGAGGTAG+GGG | + | chr5_2:25152545-25152564 | None:intergenic | 30.0% | |
| ATCAAAATGGGTCTGTAAAA+AGG | - | chr5_2:25152611-25152630 | Msa0764740:intron | 30.0% | |
| CTCGTGATGAAAAACAATTA+GGG | - | chr5_2:25152674-25152693 | Msa0764740:CDS | 30.0% | |
| TCGTGATGAAAAACAATTAG+GGG | - | chr5_2:25152675-25152694 | Msa0764740:CDS | 30.0% | |
| TTCCTGGGAACATTAATATT+GGG | + | chr5_2:25152730-25152749 | None:intergenic | 30.0% | |
| ATTCCTGGGAACATTAATAT+TGG | + | chr5_2:25152731-25152750 | None:intergenic | 30.0% | |
| GATTTCACTTCTTAATTCCT+GGG | + | chr5_2:25152745-25152764 | None:intergenic | 30.0% | |
| TGATTTCACTTCTTAATTCC+TGG | + | chr5_2:25152746-25152765 | None:intergenic | 30.0% | |
| AAGAAGTGAAATCATAATCC+CGG | - | chr5_2:25152752-25152771 | Msa0764740:intron | 30.0% | |
| TAAAATATTCCCATGAAGGT+GGG | + | chr5_2:25152883-25152902 | None:intergenic | 30.0% | |
| ATAAAATATTCCCATGAAGG+TGG | + | chr5_2:25152884-25152903 | None:intergenic | 30.0% | |
| ! | TTTATTCTCACCCATTTTCT+TGG | - | chr5_2:25152899-25152918 | Msa0764740:intron | 30.0% |
| GGAAATAAAAACATGGGAAA+TGG | - | chr5_2:25152920-25152939 | Msa0764740:intron | 30.0% | |
| ATAAAAACATGGGAAATGGT+AGG | - | chr5_2:25152924-25152943 | Msa0764740:intron | 30.0% | |
| !! | ATGGTAGGTTATTTTATTCC+TGG | - | chr5_2:25152939-25152958 | Msa0764740:intron | 30.0% |
| !! | TGGTAGGTTATTTTATTCCT+GGG | - | chr5_2:25152940-25152959 | Msa0764740:intron | 30.0% |
| ! | CCTATGTTTGTTACAATGTT+AGG | + | chr5_2:25152992-25153011 | None:intergenic | 30.0% |
| CCTAACATTGTAACAAACAT+AGG | - | chr5_2:25152989-25153008 | Msa0764740:intron | 30.0% | |
| AAATGTCATGTTTAGTAAGG+GGG | + | chr5_2:25153074-25153093 | None:intergenic | 30.0% | |
| !! | GTTATTTCAAGTAGCTTTTG+AGG | + | chr5_2:25153217-25153236 | None:intergenic | 30.0% |
| AAAATGGTTCCTTTCTTTGT+TGG | - | chr5_2:25153244-25153263 | Msa0764740:intron | 30.0% | |
| !! | TCTAAAATCTATTTTGCCAG+AGG | - | chr5_2:25153375-25153394 | Msa0764740:intron | 30.0% |
| TTTAACCTAAGCAAACATGA+TGG | - | chr5_2:25153514-25153533 | Msa0764740:intron | 30.0% | |
| GATTAAATCACTACATACAG+AGG | + | chr5_2:25153565-25153584 | None:intergenic | 30.0% | |
| TCTCTCTCTCTCTGATTTAT+GGG | - | chr5_2:25149232-25149251 | Msa0764740:three_prime_UTR | 35.0% | |
| AAGAATGAAGAGGTGAGAAA+TGG | - | chr5_2:25149350-25149369 | Msa0764740:three_prime_UTR | 35.0% | |
| AAATTGAAACAGCTGCTTAG+GGG | + | chr5_2:25149690-25149709 | None:intergenic | 35.0% | |
| !! | TTTTTAAGCAAAGCACTACC+TGG | - | chr5_2:25149707-25149726 | Msa0764740:intron | 35.0% |
| ! | TGAGTTTCTTGGAGTTTTCA+TGG | - | chr5_2:25149757-25149776 | Msa0764740:intron | 35.0% |
| ! | GAGTTTCTTGGAGTTTTCAT+GGG | - | chr5_2:25149758-25149777 | Msa0764740:intron | 35.0% |
| ATACCCTTGAATGATAAGTC+TGG | - | chr5_2:25149948-25149967 | Msa0764740:intron | 35.0% | |
| TCTCCAGACTTATCATTCAA+GGG | + | chr5_2:25149954-25149973 | None:intergenic | 35.0% | |
| GAAGAAAGGGGCAAAAAATA+AGG | - | chr5_2:25150409-25150428 | Msa0764740:intron | 35.0% | |
| ACTTACATGGAGAATAAGCT+CGG | + | chr5_2:25150438-25150457 | None:intergenic | 35.0% | |
| GGATTGAAGAAAACACATGA+TGG | + | chr5_2:25150487-25150506 | None:intergenic | 35.0% | |
| AACCCCAAAACCAAACATAA+AGG | + | chr5_2:25150508-25150527 | None:intergenic | 35.0% | |
| ! | TGTTGTGGAAATTTAAGGTC+AGG | - | chr5_2:25150596-25150615 | Msa0764740:intron | 35.0% |
| !!! | TTTTGGTGCTGATATGAGTT+CGG | - | chr5_2:25150683-25150702 | Msa0764740:intron | 35.0% |
| TTGGCTACAAGCTATATTCT+TGG | - | chr5_2:25150754-25150773 | Msa0764740:intron | 35.0% | |
| CAAGATGTGCAAGTAACAAA+CGG | + | chr5_2:25150786-25150805 | None:intergenic | 35.0% | |
| CATCCCAATAAACTCTCTAT+AGG | - | chr5_2:25151087-25151106 | Msa0764740:intron | 35.0% | |
| AAATAGCCAGAAGAAGAAGA+TGG | - | chr5_2:25151443-25151462 | Msa0764740:intron | 35.0% | |
| TCAAATCCATCTTCTTCTTC+TGG | + | chr5_2:25151452-25151471 | None:intergenic | 35.0% | |
| ATTTGAGAAGTCTGATGTGA+TGG | - | chr5_2:25151466-25151485 | Msa0764740:intron | 35.0% | |
| TTTGAGAAGTCTGATGTGAT+GGG | - | chr5_2:25151467-25151486 | Msa0764740:intron | 35.0% | |
| CTACTTACTACCAGTAAACA+CGG | + | chr5_2:25151637-25151656 | None:intergenic | 35.0% | |
| ! | ATAGTTGGTACTGTAGTACT+TGG | - | chr5_2:25151748-25151767 | Msa0764740:intron | 35.0% |
| TAGAAAAATTGACAAACGGG+TGG | + | chr5_2:25152054-25152073 | None:intergenic | 35.0% | |
| !! | ATTTTGAACAGACTAGCTAG+GGG | + | chr5_2:25152119-25152138 | None:intergenic | 35.0% |
| ! | TGCCAGATTTTGTACAATGA+AGG | + | chr5_2:25152145-25152164 | None:intergenic | 35.0% |
| AAAATCTGGCACTATAGACT+TGG | - | chr5_2:25152154-25152173 | Msa0764740:intron | 35.0% | |
| ! | TTTTTGTTCTGCCTGTTGTT+TGG | - | chr5_2:25152250-25152269 | Msa0764740:intron | 35.0% |
| !! | TTTTGTTCTGCCTGTTGTTT+GGG | - | chr5_2:25152251-25152270 | Msa0764740:intron | 35.0% |
| TAACCTCCAAAAGAATCTAC+TGG | + | chr5_2:25152375-25152394 | None:intergenic | 35.0% | |
| ! | TTGGAGGTTACTGCAATTTT+TGG | - | chr5_2:25152385-25152404 | Msa0764740:intron | 35.0% |
| !! | CAGTTTTAACGGAAATATCC+AGG | + | chr5_2:25152412-25152431 | None:intergenic | 35.0% |
| ! | ATTAGTCTGAACAGACTTGA+TGG | + | chr5_2:25152505-25152524 | None:intergenic | 35.0% |
| ATCAAGTCTGTTCAGACTAA+TGG | - | chr5_2:25152504-25152523 | Msa0764740:CDS | 35.0% | |
| ! | TGTTTACAGACCCATTTTGA+TGG | + | chr5_2:25152592-25152611 | None:intergenic | 35.0% |
| TGGGTCTGTAAACATCAAAA+TGG | - | chr5_2:25152598-25152617 | Msa0764740:intron | 35.0% | |
| GGGTCTGTAAACATCAAAAT+GGG | - | chr5_2:25152599-25152618 | Msa0764740:intron | 35.0% | |
| CATAGGCATATAGTAGAAAC+TGG | - | chr5_2:25152637-25152656 | Msa0764740:intron | 35.0% | |
| GCTCGTGATGAAAAACAATT+AGG | - | chr5_2:25152673-25152692 | Msa0764740:CDS | 35.0% | |
| CGTGATGAAAAACAATTAGG+GGG | - | chr5_2:25152676-25152695 | Msa0764740:CDS | 35.0% | |
| TACCCAATATTAATGTTCCC+AGG | - | chr5_2:25152725-25152744 | Msa0764740:CDS | 35.0% | |
| AGAAGTGAAATCATAATCCC+GGG | - | chr5_2:25152753-25152772 | Msa0764740:intron | 35.0% | |
| !!! | TGCTTTTTTCGAAAAGTACC+CGG | + | chr5_2:25152774-25152793 | None:intergenic | 35.0% |
| AAAATATTCCCATGAAGGTG+GGG | + | chr5_2:25152882-25152901 | None:intergenic | 35.0% | |
| ! | TCCTGGGAATGTTTTATATC+CGG | - | chr5_2:25152956-25152975 | Msa0764740:intron | 35.0% |
| !! | TATGAAAGTTTTGTGCAGAC+AGG | + | chr5_2:25153462-25153481 | None:intergenic | 35.0% |
| ATCTACCATCATGTTTGCTT+AGG | + | chr5_2:25153522-25153541 | None:intergenic | 35.0% | |
| ATGATGGTAGATGTGAATGA+TGG | - | chr5_2:25153530-25153549 | Msa0764740:intron | 35.0% | |
| GCAAGCACTTAAGAATTTCA+AGG | - | chr5_2:25153615-25153634 | Msa0764740:intron | 35.0% | |
| TAAGGAAGCAGCGATTCAAA+AGG | + | chr5_2:25149164-25149183 | None:intergenic | 40.0% | |
| AGGTTCAAACCTGATCGATA+AGG | + | chr5_2:25149182-25149201 | None:intergenic | 40.0% | |
| CTCTCTCTCTCTCTGATTTA+TGG | - | chr5_2:25149231-25149250 | Msa0764740:three_prime_UTR | 40.0% | |
| CCTAACCCAAACCCTATTAA+GGG | + | chr5_2:25149287-25149306 | None:intergenic | 40.0% | |
| ! | CCTTAATAGGGTTTGGGTTA+GGG | - | chr5_2:25149285-25149304 | Msa0764740:three_prime_UTR | 40.0% |
| !! | TACTGTGTTGTGCTGTTTGT+GGG | - | chr5_2:25149566-25149585 | Msa0764740:intron | 40.0% |
| AATTGAAACAGCTGCTTAGG+GGG | + | chr5_2:25149689-25149708 | None:intergenic | 40.0% | |
| AGCACTACCTGGAAGAATTA+TGG | - | chr5_2:25149718-25149737 | Msa0764740:intron | 40.0% | |
| GCACTACCTGGAAGAATTAT+GGG | - | chr5_2:25149719-25149738 | Msa0764740:intron | 40.0% | |
| CACTACCTGGAAGAATTATG+GGG | - | chr5_2:25149720-25149739 | Msa0764740:intron | 40.0% | |
| ACTACCTGGAAGAATTATGG+GGG | - | chr5_2:25149721-25149740 | Msa0764740:intron | 40.0% | |
| AGAATTATGGGGGTCAATGT+TGG | - | chr5_2:25149731-25149750 | Msa0764740:intron | 40.0% | |
| ! | AATGTTGGCACTGAGTTTCT+TGG | - | chr5_2:25149746-25149765 | Msa0764740:intron | 40.0% |
| ! | TGGAGTTTTCATGGGAGATT+TGG | - | chr5_2:25149766-25149785 | Msa0764740:intron | 40.0% |
| ! | TTTTCATGGGAGATTTGGAG+AGG | - | chr5_2:25149771-25149790 | Msa0764740:intron | 40.0% |
| AGATTTGGAGAGGAAACTCA+AGG | - | chr5_2:25149781-25149800 | Msa0764740:intron | 40.0% | |
| CTCTCCAGACTTATCATTCA+AGG | + | chr5_2:25149955-25149974 | None:intergenic | 40.0% | |
| GCAATAACAGCAACATTCCT+GGG | + | chr5_2:25149978-25149997 | None:intergenic | 40.0% | |
| TGCAATAACAGCAACATTCC+TGG | + | chr5_2:25149979-25149998 | None:intergenic | 40.0% | |
| ! | TGCATCTGAAATCAAGCAGA+TGG | - | chr5_2:25149995-25150014 | Msa0764740:intron | 40.0% |
| GTTGATCGGAACAATGTCAA+GGG | - | chr5_2:25150102-25150121 | Msa0764740:intron | 40.0% | |
| ACAACATACATCGGAAGACA+GGG | + | chr5_2:25150184-25150203 | None:intergenic | 40.0% | |
| TACAACATACATCGGAAGAC+AGG | + | chr5_2:25150185-25150204 | None:intergenic | 40.0% | |
| CTTGAAACTAGGTCGAATGA+GGG | + | chr5_2:25150267-25150286 | None:intergenic | 40.0% | |
| TCTTGAAACTAGGTCGAATG+AGG | + | chr5_2:25150268-25150287 | None:intergenic | 40.0% | |
| ! | TGGGGTTGCATTTTTCTGTT+CGG | - | chr5_2:25150521-25150540 | Msa0764740:intron | 40.0% |
| !! | AGAGTCTGTTTTGAGTGTTG+TGG | - | chr5_2:25150581-25150600 | Msa0764740:intron | 40.0% |
| CAAGAGAGAGATGTGTTTAC+TGG | - | chr5_2:25150936-25150955 | Msa0764740:intron | 40.0% | |
| !! | TTATTTAGCTTGCTCACGGT+GGG | + | chr5_2:25150994-25151013 | None:intergenic | 40.0% |
| !!! | TGGTTTTGAAAGGTCATGCA+CGG | - | chr5_2:25151575-25151594 | Msa0764740:intron | 40.0% |
| ! | TTTGTTCTGCCTGTTGTTTG+GGG | - | chr5_2:25152252-25152271 | Msa0764740:intron | 40.0% |
| GTGGCAGTAGAAGTAAAAGA+GGG | + | chr5_2:25152293-25152312 | None:intergenic | 40.0% | |
| AGTGGCAGTAGAAGTAAAAG+AGG | + | chr5_2:25152294-25152313 | None:intergenic | 40.0% | |
| !! | GTTACTGCAATTTTTGGACC+TGG | - | chr5_2:25152391-25152410 | Msa0764740:intron | 40.0% |
| !! | GTGGGAGACATCAGTTTTAA+CGG | + | chr5_2:25152423-25152442 | None:intergenic | 40.0% |
| AAGTCTGTTCAGACTAATGG+TGG | - | chr5_2:25152507-25152526 | Msa0764740:CDS | 40.0% | |
| !! | ACTAATGGTGGTGGTGAATT+TGG | - | chr5_2:25152519-25152538 | Msa0764740:CDS | 40.0% |
| TCACAGACTCACCATCAAAA+TGG | - | chr5_2:25152578-25152597 | Msa0764740:intron | 40.0% | |
| CACAGACTCACCATCAAAAT+GGG | - | chr5_2:25152579-25152598 | Msa0764740:intron | 40.0% | |
| ! | GGTCTGTAAAAAGGAAGCAT+AGG | - | chr5_2:25152620-25152639 | Msa0764740:intron | 40.0% |
| !!! | GCTTTTTTCGAAAAGTACCC+GGG | + | chr5_2:25152773-25152792 | None:intergenic | 40.0% |
| AAATATTCCCATGAAGGTGG+GGG | + | chr5_2:25152881-25152900 | None:intergenic | 40.0% | |
| ! | CCTGGGAATGTTTTATATCC+GGG | - | chr5_2:25152957-25152976 | Msa0764740:intron | 40.0% |
| GTTCCTTTCTTTGTTGGTCA+TGG | - | chr5_2:25153250-25153269 | Msa0764740:intron | 40.0% | |
| ACACCATGACCAACAAAGAA+AGG | + | chr5_2:25153256-25153275 | None:intergenic | 40.0% | |
| GTCATGGTGTTCTTCTCTTT+GGG | - | chr5_2:25153266-25153285 | Msa0764740:intron | 40.0% | |
| GTACCTGGATATCGTTAACA+AGG | - | chr5_2:25153397-25153416 | Msa0764740:intron | 40.0% | |
| CTTCCTTGTTAACGATATCC+AGG | + | chr5_2:25153403-25153422 | None:intergenic | 40.0% | |
| AGCGGTACTCAAGAGAATAG+CGG | + | chr5_2:25149132-25149151 | None:intergenic | 45.0% | |
| CAGCGATTCAAAAGGTGATG+CGG | + | chr5_2:25149156-25149175 | None:intergenic | 45.0% | |
| ! | CCCTTAATAGGGTTTGGGTT+AGG | - | chr5_2:25149284-25149303 | Msa0764740:three_prime_UTR | 45.0% |
| CCCTAACCCAAACCCTATTA+AGG | + | chr5_2:25149288-25149307 | None:intergenic | 45.0% | |
| !! | GGTTTGGGTTAGGGTTTTGA+AGG | - | chr5_2:25149294-25149313 | Msa0764740:three_prime_UTR | 45.0% |
| GGTGAGAAATGGAGTTGAAG+AGG | - | chr5_2:25149361-25149380 | Msa0764740:three_prime_UTR | 45.0% | |
| !! | GTACTGTGTTGTGCTGTTTG+TGG | - | chr5_2:25149565-25149584 | Msa0764740:intron | 45.0% |
| TTGACCCCCATAATTCTTCC+AGG | + | chr5_2:25149728-25149747 | None:intergenic | 45.0% | |
| GGTTGATCGGAACAATGTCA+AGG | - | chr5_2:25150101-25150120 | Msa0764740:intron | 45.0% | |
| ! | AATGTCAAGGGCATGGTGTT+TGG | - | chr5_2:25150114-25150133 | Msa0764740:intron | 45.0% |
| CAACATACATCGGAAGACAG+GGG | + | chr5_2:25150183-25150202 | None:intergenic | 45.0% | |
| TGATAAGGATACGGGCTTTG+AGG | - | chr5_2:25150363-25150382 | Msa0764740:intron | 45.0% | |
| ! | GCATTTTTCTGTTCGGACTG+AGG | - | chr5_2:25150528-25150547 | Msa0764740:intron | 45.0% |
| ! | TTTTTCTGTTCGGACTGAGG+AGG | - | chr5_2:25150531-25150550 | Msa0764740:intron | 45.0% |
| !! | GCTCCATAGTTCCTGCTTTT+AGG | - | chr5_2:25150645-25150664 | Msa0764740:intron | 45.0% |
| ACGCCTAAAAGCAGGAACTA+TGG | + | chr5_2:25150651-25150670 | None:intergenic | 45.0% | |
| CTTGTTACACGCCTAAAAGC+AGG | + | chr5_2:25150659-25150678 | None:intergenic | 45.0% | |
| ! | GGCGTGTAACAAGTCTGTTT+TGG | - | chr5_2:25150666-25150685 | Msa0764740:intron | 45.0% |
| ! | TATGAGTTCGGTTTGCTCCT+TGG | - | chr5_2:25150695-25150714 | Msa0764740:intron | 45.0% |
| AAACTCCACACCTAACACCA+AGG | + | chr5_2:25150715-25150734 | None:intergenic | 45.0% | |
| CTGTCTACCATGAGAGACAT+TGG | - | chr5_2:25150961-25150980 | Msa0764740:intron | 45.0% | |
| CTACCATGAGAGACATTGGT+AGG | - | chr5_2:25150965-25150984 | Msa0764740:intron | 45.0% | |
| AGACCTACCAATGTCTCTCA+TGG | + | chr5_2:25150971-25150990 | None:intergenic | 45.0% | |
| !! | CTTATTTAGCTTGCTCACGG+TGG | + | chr5_2:25150995-25151014 | None:intergenic | 45.0% |
| ACCACACACAGACAGAACAA+CGG | + | chr5_2:25151864-25151883 | None:intergenic | 45.0% | |
| AGATATGAAGGGGTGATGTG+AGG | + | chr5_2:25151908-25151927 | None:intergenic | 45.0% | |
| AATTGACAAACGGGTGGTGT+AGG | + | chr5_2:25152048-25152067 | None:intergenic | 45.0% | |
| !!! | TATTCGGGTTTTCGGGTTCA+AGG | - | chr5_2:25152072-25152091 | Msa0764740:intron | 45.0% |
| ACTTGGACATCCTCACTATG+AGG | - | chr5_2:25152171-25152190 | Msa0764740:intron | 45.0% | |
| GATTTGAGCACCTCATAGTG+AGG | + | chr5_2:25152184-25152203 | None:intergenic | 45.0% | |
| ATGAGCTTTCCCCAAACAAC+AGG | + | chr5_2:25152264-25152283 | None:intergenic | 45.0% | |
| CCAAAAGAATCTACTGGAGC+AGG | + | chr5_2:25152369-25152388 | None:intergenic | 45.0% | |
| ! | CCTGCTCCAGTAGATTCTTT+TGG | - | chr5_2:25152366-25152385 | Msa0764740:intron | 45.0% |
| ! | GCTCCAGTAGATTCTTTTGG+AGG | - | chr5_2:25152369-25152388 | Msa0764740:intron | 45.0% |
| TCTGTTCAGACTAATGGTGG+TGG | - | chr5_2:25152510-25152529 | Msa0764740:CDS | 45.0% | |
| !! | ATTAGGGGGCGTTTGTTTCT+TGG | - | chr5_2:25152690-25152709 | Msa0764740:CDS | 45.0% |
| GGAGAATATGGGTAGTGACT+AGG | - | chr5_2:25152837-25152856 | Msa0764740:CDS | 45.0% | |
| GAATATGGGTAGTGACTAGG+TGG | - | chr5_2:25152840-25152859 | Msa0764740:CDS | 45.0% | |
| AATATTCCCATGAAGGTGGG+GGG | + | chr5_2:25152880-25152899 | None:intergenic | 45.0% | |
| CCCGGATATAAAACATTCCC+AGG | + | chr5_2:25152960-25152979 | None:intergenic | 45.0% | |
| GGTCATGGTGTTCTTCTCTT+TGG | - | chr5_2:25153265-25153284 | Msa0764740:intron | 45.0% | |
| !!! | TCTATTTTGCCAGAGGTACC+TGG | - | chr5_2:25153382-25153401 | Msa0764740:intron | 45.0% |
| TAACGATATCCAGGTACCTC+TGG | + | chr5_2:25153394-25153413 | None:intergenic | 45.0% | |
| GTAGCATGCAACCGTATTGA+AGG | - | chr5_2:25153675-25153694 | Msa0764740:five_prime_UTR | 45.0% | |
| !!! | TTTTCATTTTAATTAATTAT+AGG | - | chr5_2:25150080-25150099 | Msa0764740:intron | 5.0% |
| !! | AAAAATGAATTTATTAATTT+AGG | + | chr5_2:25150815-25150834 | None:intergenic | 5.0% |
| !! | ATAAAAAATTAAATTAATAC+GGG | - | chr5_2:25151930-25151949 | Msa0764740:intron | 5.0% |
| !! | TATTAATTAATTATTATAAG+TGG | + | chr5_2:25152312-25152331 | None:intergenic | 5.0% |
| !!! | TATTTATATTTTTGAAATTT+TGG | + | chr5_2:25152458-25152477 | None:intergenic | 5.0% |
| !! | AAATTTCAAAAATATAAATA+TGG | - | chr5_2:25152458-25152477 | Msa0764740:CDS | 5.0% |
| GGTACTCAAGAGAATAGCGG+CGG | + | chr5_2:25149129-25149148 | None:intergenic | 50.0% | |
| TTCAAAAGGTGATGCGGCAG+CGG | + | chr5_2:25149150-25149169 | None:intergenic | 50.0% | |
| TCGCTGCTTCCTTATCGATC+AGG | - | chr5_2:25149170-25149189 | Msa0764740:three_prime_UTR | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+AGG | + | chr5_2:25149202-25149221 | None:intergenic | 50.0% | |
| ACATCTGCTAATACGCTGCC+TGG | - | chr5_2:25149492-25149511 | Msa0764740:intron | 50.0% | |
| ATGATAAGTCTGGAGAGCCC+AGG | - | chr5_2:25149958-25149977 | Msa0764740:intron | 50.0% | |
| TCGGAACAATGTCAAGGGCA+TGG | - | chr5_2:25150107-25150126 | Msa0764740:intron | 50.0% | |
| ! | TCAAGGGCATGGTGTTTGGA+AGG | - | chr5_2:25150118-25150137 | Msa0764740:intron | 50.0% |
| ! | CAAGGGCATGGTGTTTGGAA+GGG | - | chr5_2:25150119-25150138 | Msa0764740:intron | 50.0% |
| TGGTGTTTGGAAGGGTGGAT+TGG | - | chr5_2:25150127-25150146 | Msa0764740:intron | 50.0% | |
| ! | GGTGTTTGGAAGGGTGGATT+GGG | - | chr5_2:25150128-25150147 | Msa0764740:intron | 50.0% |
| !! | GTGTTTGGAAGGGTGGATTG+GGG | - | chr5_2:25150129-25150148 | Msa0764740:intron | 50.0% |
| GAAACTAGGTCGAATGAGGG+AGG | + | chr5_2:25150264-25150283 | None:intergenic | 50.0% | |
| !! | GATACGGGCTTTGAGGTACA+CGG | - | chr5_2:25150370-25150389 | Msa0764740:intron | 50.0% |
| ! | TTTGAGGTACACGGAGAAGG+AGG | - | chr5_2:25150379-25150398 | Msa0764740:intron | 50.0% |
| AAGGAGGAGCTGTCGAAGAA+AGG | - | chr5_2:25150395-25150414 | Msa0764740:intron | 50.0% | |
| AGGAGGAGCTGTCGAAGAAA+GGG | - | chr5_2:25150396-25150415 | Msa0764740:intron | 50.0% | |
| TGAGGAGGATGCATCTGTGT+TGG | - | chr5_2:25150546-25150565 | Msa0764740:intron | 50.0% | |
| !! | TCGGTTTGCTCCTTGGTGTT+AGG | - | chr5_2:25150702-25150721 | Msa0764740:intron | 50.0% |
| !! | TTGCTCCTTGGTGTTAGGTG+TGG | - | chr5_2:25150707-25150726 | Msa0764740:intron | 50.0% |
| GCACGGTACAAGACCTATCA+AGG | - | chr5_2:25151592-25151611 | Msa0764740:intron | 50.0% | |
| CTACAGTGGGAGACCTTGAT+AGG | + | chr5_2:25151608-25151627 | None:intergenic | 50.0% | |
| GGTAGCGTGTTTGCAAGTGA+AGG | - | chr5_2:25151769-25151788 | Msa0764740:intron | 50.0% | |
| GGGTCAGTTTCGGTTTCTGA+TGG | - | chr5_2:25151950-25151969 | Msa0764740:intron | 50.0% | |
| TAGTAACAGTCGAGTGCGGA+TGG | + | chr5_2:25151987-25152006 | None:intergenic | 50.0% | |
| TGGGTAGTAACAGTCGAGTG+CGG | + | chr5_2:25151991-25152010 | None:intergenic | 50.0% | |
| ! | GGTCGTCGGGTCAACATTTT+TGG | + | chr5_2:25152021-25152040 | None:intergenic | 50.0% |
| ACAAACGGGTGGTGTAGGAT+CGG | + | chr5_2:25152043-25152062 | None:intergenic | 50.0% | |
| ! | TTGAACAGACTAGCTAGGGG+TGG | + | chr5_2:25152116-25152135 | None:intergenic | 50.0% |
| ! | AGTTTTTCCCCCCACCTTCA+TGG | - | chr5_2:25152870-25152889 | Msa0764740:CDS | 50.0% |
| ! | GTTTTTCCCCCCACCTTCAT+GGG | - | chr5_2:25152871-25152890 | Msa0764740:CDS | 50.0% |
| ! | AGTCTAGCTCATAGCACCAC+CGG | - | chr5_2:25153421-25153440 | Msa0764740:intron | 50.0% |
| GAATAGCGGCGGTGCTCAAA+AGG | + | chr5_2:25149118-25149137 | None:intergenic | 55.0% | |
| TTGGACGTTGGACAGCCTGA+TGG | - | chr5_2:25150153-25150172 | Msa0764740:intron | 55.0% | |
| GAAGACAGGGGACAACCATC+AGG | + | chr5_2:25150171-25150190 | None:intergenic | 55.0% | |
| !! | GGCTTTGAGGTACACGGAGA+AGG | - | chr5_2:25150376-25150395 | Msa0764740:intron | 55.0% |
| GGAGGAGCTGTCGAAGAAAG+GGG | - | chr5_2:25150397-25150416 | Msa0764740:intron | 55.0% | |
| AACACGGCGCTGTCTACAGT+GGG | + | chr5_2:25151621-25151640 | None:intergenic | 55.0% | |
| AAACACGGCGCTGTCTACAG+TGG | + | chr5_2:25151622-25151641 | None:intergenic | 55.0% | |
| GTAGACAGCGCCGTGTTTAC+TGG | - | chr5_2:25151624-25151643 | Msa0764740:intron | 55.0% | |
| GCCGTTGTTCTGTCTGTGTG+TGG | - | chr5_2:25151860-25151879 | Msa0764740:intron | 55.0% | |
| CAAACGGGTGGTGTAGGATC+GGG | + | chr5_2:25152042-25152061 | None:intergenic | 55.0% | |
| !!! | TCGGGTTTTCGGGTTCAAGG+CGG | - | chr5_2:25152075-25152094 | Msa0764740:intron | 55.0% |
| TCATAGCACCACCGGAGTCA+GGG | - | chr5_2:25153429-25153448 | Msa0764740:intron | 55.0% | |
| AGCGGCGGTGCTCAAAAGGA+AGG | + | chr5_2:25149114-25149133 | None:intergenic | 60.0% | |
| GGGCATGGTGTTTGGAAGGG+TGG | - | chr5_2:25150122-25150141 | Msa0764740:intron | 60.0% | |
| !! | TGGAAGGGTGGATTGGGGCT+TGG | - | chr5_2:25150134-25150153 | Msa0764740:intron | 60.0% |
| !! | GTGGATTGGGGCTTGGACGT+TGG | - | chr5_2:25150141-25150160 | Msa0764740:intron | 60.0% |
| TGGTGTAGGATCGGGTCGTC+GGG | + | chr5_2:25152034-25152053 | None:intergenic | 60.0% | |
| GTGGTGTAGGATCGGGTCGT+CGG | + | chr5_2:25152035-25152054 | None:intergenic | 60.0% | |
| !!! | CGGGTTTTCGGGTTCAAGGC+GGG | - | chr5_2:25152076-25152095 | Msa0764740:intron | 60.0% |
| !!! | GTTTTCGGGTTCAAGGCGGG+TGG | - | chr5_2:25152079-25152098 | Msa0764740:intron | 60.0% |
| CTCATAGCACCACCGGAGTC+AGG | - | chr5_2:25153428-25153447 | Msa0764740:intron | 60.0% | |
| CATAGCACCACCGGAGTCAG+GGG | - | chr5_2:25153430-25153449 | Msa0764740:intron | 60.0% | |
| ! | TTCGGGTTCAAGGCGGGTGG+CGG | - | chr5_2:25152082-25152101 | Msa0764740:intron | 65.0% |
| CAGGAGCCAGCCCCTGACTC+CGG | + | chr5_2:25153443-25153462 | None:intergenic | 70.0% | |
| GCACCACCGGAGTCAGGGGC+TGG | - | chr5_2:25153434-25153453 | Msa0764740:intron | 75.0% | |
| GAGCCAGCCCCTGACTCCGG+TGG | + | chr5_2:25153440-25153459 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 25149111 | 25153736 | 25149111 | ID=Msa0764740;Name=Msa0764740 |
| chr5_2 | mRNA | 25149111 | 25153736 | 25149111 | ID=Msa0764740-mRNA-1;Parent=Msa0764740;Name=Msa0764740-mRNA-1;_AED=0.21;_eAED=0.21;_QI=84|1|1|1|0.6|0.5|6|364|151 |
| chr5_2 | exon | 25149111 | 25149452 | 25149111 | ID=Msa0764740-mRNA-1:exon:10156;Parent=Msa0764740-mRNA-1 |
| chr5_2 | exon | 25152396 | 25152567 | 25152396 | ID=Msa0764740-mRNA-1:exon:10155;Parent=Msa0764740-mRNA-1 |
| chr5_2 | exon | 25152653 | 25152745 | 25152653 | ID=Msa0764740-mRNA-1:exon:10154;Parent=Msa0764740-mRNA-1 |
| chr5_2 | exon | 25152831 | 25152903 | 25152831 | ID=Msa0764740-mRNA-1:exon:10153;Parent=Msa0764740-mRNA-1 |
| chr5_2 | exon | 25153034 | 25153176 | 25153034 | ID=Msa0764740-mRNA-1:exon:10152;Parent=Msa0764740-mRNA-1 |
| chr5_2 | exon | 25153656 | 25153736 | 25153656 | ID=Msa0764740-mRNA-1:exon:10151;Parent=Msa0764740-mRNA-1 |
| chr5_2 | five_prime_UTR | 25153656 | 25153736 | 25153656 | ID=Msa0764740-mRNA-1:five_prime_utr;Parent=Msa0764740-mRNA-1 |
| chr5_2 | five_prime_UTR | 25153174 | 25153176 | 25153174 | ID=Msa0764740-mRNA-1:five_prime_utr;Parent=Msa0764740-mRNA-1 |
| chr5_2 | CDS | 25153034 | 25153173 | 25153034 | ID=Msa0764740-mRNA-1:cds;Parent=Msa0764740-mRNA-1 |
| chr5_2 | CDS | 25152831 | 25152903 | 25152831 | ID=Msa0764740-mRNA-1:cds;Parent=Msa0764740-mRNA-1 |
| chr5_2 | CDS | 25152653 | 25152745 | 25152653 | ID=Msa0764740-mRNA-1:cds;Parent=Msa0764740-mRNA-1 |
| chr5_2 | CDS | 25152418 | 25152567 | 25152418 | ID=Msa0764740-mRNA-1:cds;Parent=Msa0764740-mRNA-1 |
| chr5_2 | three_prime_UTR | 25152396 | 25152417 | 25152396 | ID=Msa0764740-mRNA-1:three_prime_utr;Parent=Msa0764740-mRNA-1 |
| chr5_2 | three_prime_UTR | 25149111 | 25149452 | 25149111 | ID=Msa0764740-mRNA-1:three_prime_utr;Parent=Msa0764740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
